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lncRNA: ENSG00000279041 |
Summary for CTD-2373N4.3 |
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Gene information | Ensembl ID | ENSG00000279041 | Gene symbol | CTD-2373N4.3 |
Gene name | ||
HGNC | ||
Entrez ID | ||
Gene type | TEC | |
Synonyms | ||
UniProtAcc |
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Structure and expression level for CTD-2373N4.3 |
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Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
ENSG00000279041 | 2.599081e+02 | 1.087662e+00 | 2.127481e-01 | 5.112441e+00 | 3.180000e-07 | 1.500000e-06 | UP | KIRP |
ENSG00000279041 | 1.238142e+02 | -1.882559e+00 | 4.014971e-01 | -4.688848e+00 | 2.750000e-06 | 6.650000e-05 | DOWN | ESCA |
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LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
ENSG00000279041 | 4.453915e-01 | 2.169889e-03 | CHOL | 3.235597e-03 |
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lncRNA-Protein interaction for CTD-2373N4.3 |
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LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000128908 | INO80 | 82.42 | 95.9133 | Q9ULG1 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000149311 | ATM | 80.53 | 96.9795 | Q13315 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000024048 | UBR2 | 76.56 | 92.6766 | Q8IWV8 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000146247 | PHIP | 76.43 | 96.6505 | Q8WWQ0 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000119778 | ATAD2B | 68.94 | 92.6353 | Q9ULI0 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000175054 | ATR | 68.94 | 95.3951 | Q13535 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000196367 | TRRAP | 68.15 | 96.6276 | Q9Y4A5 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000164080 | RAD54L2 | 66.19 | 92.5359 | Q9Y4B4 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000185658 | BRWD1 | 63.4 | 97.0239 | Q9NSI6 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000101126 | ADNP | 61.73 | 94.859 | Q9H2P0 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000263001 | GTF2I | 61.0 | 94.2052 | P78347 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000198879 | SFMBT2 | 58.28 | 94.1248 | Q5VUG0 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000124177 | CHD6 | 57.11 | 90.8956 | Q8TD26 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000134852 | CLOCK | 46.81 | 93.2453 | O15516 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000162409 | PRKAA2 | 8.52 | 93.4931 | P54646 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000143033 | MTF2 | 5.66 | 92.758 | Q9Y483 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000080503 | SMARCA2 | 82.94 | 95.6104 | P51531 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000009954 | BAZ1B | 74.98 | 91.8095 | Q9UIG0 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000080603 | SRCAP | 73.01 | 94.2414 | Q6ZRS2 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000147162 | OGT | 71.13 | 92.748 | O15294 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000163939 | PBRM1 | 65.05 | 95.2058 | Q86U86 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000165288 | BRWD3 | 62.92 | 96.8683 | Q6RI45 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000005339 | CREBBP | 61.53 | 90.9919 | Q92793 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000100393 | EP300 | 61.16 | 92.0516 | Q09472 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000198919 | DZIP3 | 56.76 | 94.0987 | Q86Y13 | RBP,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000006459 | KDM7A | 52.63 | 93.3163 | Q6ZMT4 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000186532 | SMYD4 | 48.34 | 91.4755 | Q8IYR2 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000189079 | ARID2 | 45.67 | 93.2248 | Q68CP9 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000183495 | EP400 | 42.44 | 96.212 | Q96L91 | Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000119638 | NEK9 | 35.29 | 94.1658 | Q8TD19 | Epi | NA |
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LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000080603 | SRCAP | 73.01 | 94.2081 | Q6ZRS2 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000124782 | RREB1 | 61.95 | 95.1396 | Q92766 | TF | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000101126 | ADNP | 61.73 | 94.9229 | Q9H2P0 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000263001 | GTF2I | 61.0 | 94.6162 | P78347 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000159140 | SON | 47.3 | 96.2948 | P18583 | TF,RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000134852 | CLOCK | 46.81 | 93.2343 | O15516 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000189079 | ARID2 | 45.67 | 93.4428 | Q68CP9 | TF,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000117000 | RLF | 43.47 | 92.3978 | Q13129 | TF | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000257315 | ZBED6 | 37.4 | 90.801 | P86452 | TF | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000166432 | ZMAT1 | 25.6 | 92.7032 | Q5H9K5 | TF | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000172059 | KLF11 | 11.98 | 91.0881 | O14901 | TF | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000068305 | MEF2A | 11.92 | 90.2842 | Q02078 | TF | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000143033 | MTF2 | 5.66 | 92.0919 | Q9Y483 | TF,Epi | NA |
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LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000159082 | SYNJ1 | 69.95 | 96.0943 | O43426 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000134698 | AGO4 | 65.78 | 93.6658 | Q9HCK5 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000213079 | SCAF8 | 63.76 | 96.2136 | Q9UPN6 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000129566 | TEP1 | 62.74 | 96.2308 | Q99973 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000114127 | XRN1 | 61.62 | 96.5738 | Q8IZH2 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000106344 | RBM28 | 57.88 | 91.8846 | Q9NW13 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000198919 | DZIP3 | 56.76 | 94.4263 | Q86Y13 | RBP,Epi | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000126070 | AGO3 | 56.03 | 92.9964 | Q9H9G7 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000021776 | AQR | 51.62 | 96.1873 | O60306 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000125676 | THOC2 | 51.6 | 97.1077 | Q8NI27 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000092847 | AGO1 | 48.12 | 93.507 | Q9UL18 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000159140 | SON | 47.3 | 96.4174 | P18583 | TF,RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000100201 | DDX17 | 42.84 | 93.0919 | Q92841 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000123908 | AGO2 | 41.77 | 93.3235 | Q9UKV8 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000135870 | RC3H1 | 41.03 | 95.7166 | Q5TC82 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000244462 | RBM12 | 36.19 | 91.6547 | Q9NTZ6 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000162408 | NOL9 | 35.3 | 92.4725 | Q5SY16 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000129351 | ILF3 | 29.8 | 95.4768 | Q12906 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000215301 | DDX3X | 16.91 | 90.4886 | O00571 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000111615 | KRR1 | 10.32 | 91.2968 | Q13601 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000111605 | CPSF6 | 9.96 | 93.1134 | Q16630 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000149532 | CPSF7 | 8.86 | 94.0706 | Q8N684 | RBP | NA |
ENSG00000279041 | ENST00000623026 | CTD-2373N4.3 | ENSG00000172795 | DCP2 | 4.02 | 94.1985 | Q8IU60 | RBP | NA |
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