lncRNA targets the enhancer region and positively regulates the gene expression. |
lncRNA targets the promoter region and positively regulates the gene expression. |
lncRNA targets the promoter region and negatively regulates the gene expression. |
lncRNA targets the 3'UTR region and negatively regulates the mRNA. |
Only predicted by lncTar | PARP1,SEC23B,OGDH,GNS,PVR,PSMD2,PNPO,LDHA,HSPA8,UHRF1BP1L,MYH9,HEXB,CHP1,CENPN,ATIC,PLIN3,PLAUR,HSPA4,SURF4,ALDOA,CYFIP1,CHTF8,STT3A,COPA,LRP10,NOCT,PKM,NOMO1,GBA,ARF3,CLPB,PLEKHB2,BTD,PCDH1,EIF4G1,TUBA1C,FARSA,AIMP2,TEAD4,TMBIM6,ABHD5,ATP6V0C,RPN2,NOMO2 | Exist in public source | NA |
lncRNA targets the skipped exon region. | -lncRNA and exonskipping events are positively correlated. |
LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | ORF mutation | ENSG00000271895 | ENST00000612387 | exon_skip_150854 | chr17:32366664-32366757 | -7.20 | -0.1469 | ZNF207 | ENST00000321233 | In-frame | ENSG00000271895 | ENST00000612387 | exon_skip_1234 | chr1:11658532-11658628 | -11.67 | -0.2382 | FBXO44 | ENST00000251547,ENST00000376770 | In-frame |
-lncRNA and exonskipping events are negatively correlated. |
![lncRNA and exonskipping events negative correlated](images/figure_exon/figure_neg/ENSG00000271895.svg) |
LncRNA Ensembl ID | LncRNA ENST ID | Exon ID | Skipped Exon | dG | ndG | Gene name with skipped exon | TransID with skipped exon | LOF | ENSG00000271895 | ENST00000612387 | exon_skip_52671 | chr10:97461495-97461622 | -11.59 | -0.1396 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_66482 | chr11:126274926-126275021 | -9.09 | -0.1021 | FOXRED1 | ENST00000263578 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_111863 | chr14:23565815-23565892 | -8.98 | -0.1283 | AP1G2 | ENST00000308724,ENST00000397120 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_114365 | chr14:74290026-74290118 | -10.25 | -0.2500 | ABCD4 | ENST00000356924 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_290158 | chr17:42953723-42953778 | -7.34 | -0.1882 | AARSD1 | ENST00000427569 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_370518 | chr22:50247691-50247776 | -10.55 | -0.1302 | HDAC10 | ENST00000216271 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_382458 | chr3:38131595-38131638 | -6.05 | -0.2241 | ACAA1 | ENST00000333167 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_436035 | chr5:79656957-79657001 | -5.57 | -0.1505 | TENT2 | ENST00000296783,ENST00000428308,ENST00000453514 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_11029 | chr1:154989559-154989707 | -15.20 | -0.1078 | FLAD1 | ENST00000292180 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_41813 | chr10:68337857-68337996 | -11.25 | -0.1032 | HNRNPH3 | ENST00000265866 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_74009 | chr11:64773429-64773505 | -8.95 | -0.1444 | SF1 | ENST00000377390 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_77641 | chr11:117207066-117207160 | -10.13 | -0.1688 | PCSK7 | ENST00000320934 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_110959 | chr14:20372732-20372857 | -12.51 | -0.1025 | TEP1 | ENST00000262715 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_111870 | chr14:23566561-23566686 | -11.71 | -0.4684 | AP1G2 | ENST00000397120 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_114376 | chr14:74293153-74293248 | -11.58 | -0.1678 | ABCD4 | ENST00000356924 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_132355 | chr16:1786756-1786955 | -22.36 | -0.1249 | NUBP2 | ENST00000262302 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_309204 | chr19:49181348-49181461 | -10.15 | -0.1015 | TRPM4 | ENST00000252826 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_319223 | chr19:43526200-43526349 | -13.54 | -0.1003 | ETHE1 | ENST00000292147 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_326885 | chr2:74490024-74490127 | -11.14 | -0.1160 | TTC31 | ENST00000233623 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_357254 | chr20:44622587-44622652 | -11.63 | -0.1817 | ADA | ENST00000372874 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_374375 | chr3:49675182-49675309 | -10.68 | -0.1047 | APEH | ENST00000296456 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_374497 | chr3:49999439-49999513 | -10.17 | -0.1784 | RBM6 | ENST00000266022 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_374551 | chr3:50100531-50100605 | -12.53 | -0.2320 | RBM5 | ENST00000347869 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_384420 | chr3:49812647-49812738 | -11.71 | -0.1446 | UBA7 | ENST00000333486 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_441368 | chr5:32380074-32380172 | -10.78 | -0.1185 | ZFR | ENST00000265069 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_509943 | chrX:47175018-47175092 | -10.96 | -0.1797 | RBM10 | ENST00000377604 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_4796 | chr1:41007448-41007545 | -10.51 | -0.1251 | CTPS1 | ENST00000372616,ENST00000372621 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_9446 | chr1:147270931-147271005 | -6.98 | -0.1012 | CHD1L | ENST00000369258 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_52701 | chr10:97468965-97469104 | -16.06 | -0.1656 | MMS19 | ENST00000370782,ENST00000438925 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_53559 | chr10:101793912-101793998 | -7.04 | -0.1067 | OGA | ENST00000361464 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_62623 | chr11:69079833-69079883 | -7.57 | -0.1893 | TPCN2 | ENST00000294309 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_79575 | chr12:6727925-6728001 | -8.69 | -0.1975 | COPS7A | ENST00000229251,ENST00000534877,ENST00000534947,ENST00000539735,ENST00000543155 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_87733 | chr12:120571190-120571291 | -13.00 | -0.1585 | RNF10 | ENST00000325954 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_92074 | chr12:50142052-50142110 | -5.63 | -0.1564 | CERS5 | ENST00000317551 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_95407 | chr12:95040475-95040597 | -11.50 | -0.1386 | NR2C1 | ENST00000333003 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_132563 | chr16:2527560-2527615 | -8.51 | -0.2934 | AMDHD2 | ENST00000293971 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_133217 | chr16:8635038-8635079 | -8.00 | -0.2222 | METTL22 | ENST00000381920 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_138351 | chr16:70469151-70469323 | -19.77 | -0.1582 | FUK | ENST00000288078 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_139422 | chr16:89114338-89114487 | -14.22 | -0.1023 | ACSF3 | ENST00000317447,ENST00000406948 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_139933 | chr16:90035632-90035687 | -8.02 | -0.1782 | GAS8 | ENST00000268699 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_292904 | chr17:69251746-69251866 | -13.25 | -0.1636 | ABCA5 | ENST00000392676,ENST00000588877 | In-frame | ENSG00000271895 | ENST00000612387 | exon_skip_300663 | chr19:1425877-1425960 | -8.45 | -0.3018 | DAZAP1 | ENST00000233078 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_313557 | chr19:5786748-5786845 | -16.10 | -0.2597 | DUS3L | ENST00000309061 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_324294 | chr2:27774423-27774530 | -8.66 | -0.1203 | MRPL33 | ENST00000296102 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_326825 | chr2:73957124-73957240 | -11.31 | -0.1216 | DGUOK | ENST00000264093 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_327433 | chr2:86125794-86125880 | -7.05 | -0.1640 | PTCD3 | ENST00000254630 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_327748 | chr2:95410863-95411026 | -19.05 | -0.1323 | FAHD2A | ENST00000233379,ENST00000447036 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_333962 | chr2:219247112-219247246 | -13.85 | -0.1332 | STK16 | ENST00000396738,ENST00000409638 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_339830 | chr2:69423581-69423717 | -13.37 | -0.1028 | NFU1 | ENST00000410022 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_353131 | chr20:58669290-58669453 | -14.48 | -0.1073 | STX16 | ENST00000371141 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_370525 | chr22:50250426-50250523 | -10.93 | -0.2666 | HDAC10 | ENST00000216271 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_371367 | chr3:9697710-9697866 | -14.57 | -0.1518 | MTMR14 | ENST00000296003 | In-frame | ENSG00000271895 | ENST00000607145 | exon_skip_377198 | chr3:123130479-123130616 | -13.51 | -0.1648 | PDIA5 | ENST00000316218 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_380242 | chr3:186784961-186785101 | -10.73 | -0.1192 | EIF4A2 | ENST00000323963 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_387016 | chr3:121788283-121788432 | -10.04 | -0.1046 | IQCB1 | ENST00000310864 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_444499 | chr5:138164086-138164133 | -5.95 | -0.2204 | BRD8 | ENST00000254900 | Frame-shift | ENSG00000271895 | ENST00000612387 | exon_skip_470226 | chr7:103307595-103307708 | -9.75 | -0.1071 | PMPCB | ENST00000249269 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_511212 | chrX:71555189-71555385 | -19.69 | -0.1313 | OGT | ENST00000373719 | Frame-shift | ENSG00000271895 | ENST00000607145 | exon_skip_153380 | chr17:45137018-45137139 | -17.11 | -0.1746 | ACBD4 | ENST00000376955 | Frame-shift |
lncRNA targets by miRNA. |
![lncRNA targets by miRNA](images/figure_miRNA/ENSG00000271895.svg) |
LncRNA Ensembl ID | miRNA ID | LncRNA ENST ID | Binding site in lncRNA | Score | Energy | Align Len | Public source | ENSG00000271895 | hsa-mir-22 | ENST00000607145 | chr1:11029665-11029760 | 167.00 | -78.78 | 87 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000607145 | chr1:11029795-11029880 | 165.00 | -82.64 | 81 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000607145 | chr1:11030262-11030353 | 165.00 | -68.18 | 87 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000607145 | chr1:11030407-11030489 | 155.00 | -66.23 | 78 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000607145 | chr1:11029912-11029994 | 153.00 | -67.45 | 84 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000607145 | chr1:11030015-11030106 | 146.00 | -71.53 | 88 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000607145 | chr1:11030137-11030221 | 145.00 | -72.24 | 80 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000612387 | chr1:11030142-11030233 | 165.00 | -68.18 | 87 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000612387 | chr1:11030287-11030369 | 155.00 | -66.23 | 78 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000612387 | chr1:11029792-11029874 | 153.00 | -67.45 | 84 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000612387 | chr1:11029895-11029986 | 146.00 | -71.53 | 88 | NA | ENSG00000271895 | hsa-mir-22 | ENST00000612387 | chr1:11030017-11030101 | 145.00 | -72.24 | 80 | NA |
RNA A-to-I editing events in lncRNA. |
LncRNAediting ID | LncRNA Ensembl ID | Chromosome | Editing Position | Strand | Gene Type | Gene Name | Transcript ID | Transcript Type | Transcript Name |
Edited-associated DElncRNAs in cancer. |
LncRNA Ensembl ID | LncRNA Index | Cancer Type | Chr_Postion_Strand | AVE1 | AVE2 | log2FC | W-value | P-value | Adjc.p-value | Change |
Correlation between RNA A-to-I editing events's frequecy and lncRNA expression. |
LncRNA Ensembl ID | LncRNA Index | Correlation | P-value | Adjc.p-value |
Cis-expression quantitative trait loci(cis-eQTL) of lncRNA. |
LncRNA Ensembl ID | LncRNA Name | SNP info | Number of Positive corelated Cancer | Positive corelated Cancer | Number of Negative corelated Cancer | Negative corelated Cancer |
lncRNA regulates differentially expressed genes by function as enhancer. |
LncRNA Ensembl ID | PC Gene ID | PC Gene Name | Positive correlated cancers | Cancer with PC gene up-regulation | Cancer with PC gene down-regulation |
LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5). |
lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5). |
lncRNA ID | TF ID | TF Name | PCgene ID | PCgene Name | Number of Cancer | Canaer Types |
LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region. |
LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type |
LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region. |
LncRNA Ensembl ID | RBP ID | RBP Gene Name | Exon Skipping ID | Skipped Exon | EX Gene Name | EX Affected TransID | ORF_anno | Cancer Type | ENSG00000271895 | ENSG00000139746 | RBM26 | exon_skip_114365 | ENSG00000119688:chr14:74290026-74290118 | ABCD4 | ENST00000356924 | Frame-shift | UVM,SKCM,READ,PCPG,THCA | ENSG00000271895 | ENSG00000139746 | RBM26 | exon_skip_382458 | ENSG00000060971:chr3:38131595-38131638 | ACAA1 | ENST00000333167 | Frame-shift | STAD,UVM,SKCM,READ,THYM,PAAD,THCA |
lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region. |
LncRNA Ensembl ID | LncRNA ENST ID | PC Gene Name | PC Gene ID | PC ENST ID | dG | nDG | Cancer with PC gene up-regulation | Cancer with PC gene Down-regulation |
lncRNA regulates mRNA by competing the miRNA binding site with mRNA. |
LncRNA Ensembl ID | lncRNA-miRNA-mRNA | Cancer Types | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PPIH | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,WDR33 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NDE1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C19orf44 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,HSF2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RXRB | KICH,CESC,CHOL,ACC,KIRP | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C1orf35 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RWDD3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ARL6IP6 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,STK38 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CERS5 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ATAT1 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RIT1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,COIL | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RBM6 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TADA2A | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MTF2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SFPQ | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RBM8A | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C12orf76 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NRF1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RBBP4 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RING1 | KICH,CESC,CHOL,ACC,KIRP | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ZNF7 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ESCO1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ILKAP | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NAA16 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SRSF2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TRA2B | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ABT1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CNOT11 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PRCC | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RCE1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,JPT2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,KAT2A | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C1orf52 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,STK36 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SRSF3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,HMGN1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,EHMT2 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ERCC3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SRSF6 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MYL6B | KICH,CESC,CHOL,ACC,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,EXOSC2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,LBR | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ORMDL1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C17orf75 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C2orf49 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,VEZF1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,JUP | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,POLR2H | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NAB1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PAXBP1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MCM8 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RBM39 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TUBD1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SMARCE1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,GNL1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CBFB | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,KDM1A | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ING5 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SAP30BP | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CEP131 | CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CLK2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SSRP1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PRPF38A | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SMPD4 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,HDAC1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,KHDC4 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,HEXD | KICH,CESC,CHOL,ACC,KIRP | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MRPL53 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MBTD1 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TIA1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NSD3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NOC2L | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,DPF2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PTMA | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ARFIP2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PKN3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NOP58 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,EEF1AKMT2 | KICH,CESC,CHOL,ACC,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,STMN1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CDK11B | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PRPF38B | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TIGD1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CHST14 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SF3A3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,AKAP8 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RBMX | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,H3-3B | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NEK8 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PMS1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,UTP6 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,FBXO46 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ATG4B | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TRMT13 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RBM5 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TTF1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SNRPA | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ARL16 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TCF19 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,COPS7B | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CCDC174 | CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,INTS11 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SUMO2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PTK7 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MRE11 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SRSF7 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,EPN2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PHIP | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C14orf93 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CLASP1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CHTOP | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,RBM14 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CDC37 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MKS1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PCIF1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ABI2 | KICH,CESC,CHOL,ACC,KIRP | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,FNBP4 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,HMGB1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ZMYM4 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SRSF1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NOL9 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,UBXN11 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,IRF3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CRYZL1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,BUD13 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,WRNIP1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,PRR3 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,IFT172 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NUP85 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,IQCB1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MUTYH | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,HMGB2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ING4 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,IP6K2 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NT5C | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,C11orf49 | KICH,CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SRRT | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,YY1AP1 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,TMEM216 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SRSF4 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,EPCAM | KICH,CESC,CHOL,ACC,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MBD2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,EZH1 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NFRKB | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,MCM3 | KICH,CESC,CHOL,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NCK2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,NELFE | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,ZNF16 | CESC,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SZT2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,FBXL12 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,SKA2 | KICH,CHOL,ACC,KIRP,LIHC | ENSG00000271895 | RP4-635E18.8,hsa-mir-22,CCHCR1 | KICH,CHOL,ACC,KIRP,LIHC |
ORFfinder result for the gencode.v22.lncRNA.transcript.fa. |
lncRNA Ensembl ID | lncRNA ENST ID | length(AA) | start at transcript | end at transcript | ENSG00000271895.2 | ENST00000607145.1 | 322 | 7593 | 6625 | ENSG00000271895.2 | ENST00000612387.1 | 90 | 412 | 684 |
|