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lncRNA: ENSG00000259905

Summary for PWRN1

Gene summary

Gene information	Ensembl ID	ENSG00000259905
	Gene symbol	PWRN1
	Gene name	Prader-Willi region non-protein coding RNA 1
	HGNC	33235
	Entrez ID	101928840
	Gene type	lincRNA
	Synonyms	PWRN1\|15q11.2
	UniProtAcc

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Structure and expression level for PWRN1

AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure.

Differentially expressed gene analysis between cancer and normal samples.

Ensembl ID

Base mean

log2FC(AD/control)

lfcSE

Stat

P-value

Adjc.p-value

DEG direction

Cancer type

Correlation between lncRNAs and cancer stages.

LncRNA Ensembl ID

Correlation

P-value

Cancer Type

Adjc.p-value

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lncRNA-Protein interaction for PWRN1

lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5).

LncRNA Ensembl ID

LncRNA ENST ID

LncRNA Name

Protein Ensembl ID

Protein Name

CatRAPID Score

Lncpro Score

UniPortID

Gene Subtype

Public source

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lncRNA-DNA interaction for PWRN1

lncRNA targets the enhancer region and positively regulates the gene expression.

lncRNA targets the promoter region and positively regulates the gene expression.

lncRNA targets the promoter region and negatively regulates the gene expression.

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lncRNA-RNA interaction for PWRN1

lncRNA targets the 3'UTR region and negatively regulates the mRNA.

lncRNA targets the skipped exon region.

-lncRNA and exonskipping events are positively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

ORF mutation

-lncRNA and exonskipping events are negatively correlated.

LncRNA Ensembl ID

LncRNA ENST ID

Exon ID

Skipped Exon

ndG

Gene name with skipped exon

TransID with skipped exon

LOF

lncRNA targets by miRNA.

LncRNA Ensembl ID

miRNA ID

LncRNA ENST ID

Binding site in lncRNA

Score

Energy

Align Len

Public source

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Variants for PWRN1

RNA A-to-I editing events in lncRNA.

LncRNAediting ID

LncRNA Ensembl ID

Chromosome

Editing Position

Strand

Gene Type

Gene Name

Transcript ID

Transcript Type

Transcript Name

Edited-associated DElncRNAs in cancer.

LncRNA Ensembl ID

LncRNA Index

Cancer Type

Chr_Postion_Strand

AVE1

AVE2

log2FC

W-value

P-value

Adjc.p-value

Change

Correlation between RNA A-to-I editing events's frequecy and lncRNA expression.

LncRNA Ensembl ID

LncRNA Index

Correlation

P-value

Adjc.p-value

Cis-expression quantitative trait loci(cis-eQTL) of lncRNA.

LncRNA Ensembl ID	LncRNA Name	SNP info	Number of Positive corelated Cancer	Positive corelated Cancer	Number of Negative corelated Cancer	Negative corelated Cancer
ENSG00000259905	PWRN1	rs7172621:24800381:T:C	1	PCPG	0
ENSG00000259905	PWRN1	rs11857739:24575874:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs35985747:24758950:G:C	1	THCA	0
ENSG00000259905	PWRN1	rs7402778:24774948:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs369054311:24775460:AAC:A	1	THCA	0
ENSG00000259905	PWRN1	rs11161097:24731872:A:G:-	1	THCA	0
ENSG00000259905	PWRN1	rs12914724:24745770:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs12910800:24745934:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs7402833:24771390:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs1909288:24542452:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs12917411:24631933:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs11161098:24731981:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs35600665:24741291:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12912968:24610450:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs72705568:24607495:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs66524562:24574717:GT:G	1	THCA	0
ENSG00000259905	PWRN1	rs9788767:24761453:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs72705561:24602017:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs17831583:24597222:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs61994700:24580332:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs9920830:24795916:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs9920079:24795919:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs9920094:24796129:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs34004793:24486240:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs34763468:24508648:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs12909817:24592428:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs6576691:24489749:G:T	0		1	THCA
ENSG00000259905	PWRN1	rs34804878:24824442:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs34311380:24824395:AG:A	1	THCA	0
ENSG00000259905	PWRN1	rs12907257:24588439:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs4992989:24821481:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs61993152:24798929:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs2133276:24492284:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs7403037:24818497:G:T:+	0		1	THCA
ENSG00000259905	PWRN1	rs61993169:24476363:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs12902460:24499678:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs34443849:24502303:G:C	1	THCA	0
ENSG00000259905	PWRN1	rs66500833:24463411:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs4778291:24478387:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs4408501:24625102:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12916711:24522261:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs4778457:24563283:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs4597275:24462711:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs35626304:24465307:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs34024780:24494694:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs2133278:24472278:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs61993235:24541827:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs12899368:24494024:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs28622606:24829143:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs36096018:24620621:G:C	1	THCA	0
ENSG00000259905	PWRN1	rs28861743:24828713:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs143826837:24828925:A:ATCT	1	THCA	0
ENSG00000259905	PWRN1	rs72703490:24495560:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs28411795:24831957:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs8042000:24592623:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs28715816:24824508:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs28456975:24824729:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs74783357:24827020:CAT:C	1	THCA	0
ENSG00000259905	PWRN1	rs8024039:24826345:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7177735:24572057:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs78284330:24825889:CT:C	1	THCA	0
ENSG00000259905	PWRN1	rs28786136:24832114:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs28625349:24832473:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs7495122:24833611:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs7494918:24833624:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7180201:24832671:A:G:-	0		1	THCA
ENSG00000259905	PWRN1	rs7176587:24606468:A:T	1	THCA	0
ENSG00000259905	PWRN1	rs4778287:24436202:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs7495125:24833636:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs7402866:24836601:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs7403467:24840423:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs4778296:24618576:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs71411283:24830813:TTCTC:T	1	THCA	0
ENSG00000259905	PWRN1	rs4238509:24562963:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs4778293:24563366:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs71411281:24786923:TA:T	1	THCA	0
ENSG00000259905	PWRN1	rs12917173:24837569:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs11629872:24838924:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs6576353:24838525:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs7402908:24836980:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs7402804:24836600:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs1498568:24594887:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12904329:24839870:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12372990:24840137:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs4778463:24618704:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs35324226:24609999:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs2647649:24438019:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs1119458:24547421:G:T:-	0		1	THCA
ENSG00000259905	PWRN1	rs34866152:24435680:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs8038000:24560496:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs12914172:24421987:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs34030559:24423045:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs1846362:24568906:A:T	1	THCA	0
ENSG00000259905	PWRN1	rs4778420:24439141:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs71403179:24432669:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs12148562:24834049:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs4778426:24457587:A:G:-	0		1	THCA
ENSG00000259905	PWRN1	rs35595624:24632041:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs4029321:24557041:A:C:+	0		1	THCA
ENSG00000259905	PWRN1	rs2677389:24436200:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs1976758:24425761:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs1976759:24426184:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs1976760:24426185:G:C	1	THCA	0
ENSG00000259905	PWRN1	rs12909178:24427791:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs1878504:24433948:C:T:-	1	THCA	0
ENSG00000259905	PWRN1	rs4105499:24540296:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs71124263:24744813:G:GAAAA	1	THCA	0
ENSG00000259905	PWRN1	rs35791112:24745292:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs12148506:24620224:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs34056881:24773720:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs61993101:24775935:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs34007515:24776195:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs35869087:24779281:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs61993106:24781784:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs61995448:24750023:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs61993090:24758325:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs61995443:24732398:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs12911815:24740559:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs1532517:24532602:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs61993097:24767749:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs34014971:24767959:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs35717269:24770939:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs2677387:24432795:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs61993092:24759406:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs61993093:24761357:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12902094:24763586:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs12906381:24763592:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs61993098:24768489:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs11634882:24738239:C:G:-	0		1	THCA
ENSG00000259905	PWRN1	rs3803514:24596719:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs8028398:24609132:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs56137049:24609085:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs8028138:24428247:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs35012574:24764712:C:CA	0		1	THCA
ENSG00000259905	PWRN1	rs12910962:24671412:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs35168155:24725677:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs61993131:24786434:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs61993134:24789829:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs34466529:24799845:A:T	1	THCA	0
ENSG00000259905	PWRN1	rs34414719:24800242:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs12900885:24803679:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs36080197:24807098:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12899603:24809163:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12899604:24809164:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12909045:24810978:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12911860:24445163:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs61995439:24724916:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs34741465:24823696:TA:T	1	THCA	0
ENSG00000259905	PWRN1	rs67743698:24498602:C:A	0		1	THCA
ENSG00000259905	PWRN1	rs61993107:24783137:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs36079461:24725479:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs34899230:24725700:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12592979:24752509:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs35844465:24668243:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs35029462:24677387:TG:T	1	THCA	0
ENSG00000259905	PWRN1	rs11856249:24756423:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs61993572:24640152:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs150578316:24826056:C:CA	1	THCA	0
ENSG00000259905	PWRN1	rs35463340:24826460:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7402143:24753310:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs61993575:24644185:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12904497:24809850:A:G:-	0		1	THCA
ENSG00000259905	PWRN1	rs35110243:24826568:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs61993153:24798983:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs12899129:24662929:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs61995388:24666056:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs28657978:24781756:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs11632311:24758093:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs7164051:24747661:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs74003248:24769168:T:A	0		1	THCA
ENSG00000259905	PWRN1	rs2354702:24603169:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs7181199:24795876:C:G	0		1	THCA
ENSG00000259905	PWRN1	rs12908503:24664389:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs8039767:24803115:G:C	0		1	THCA
ENSG00000259905	PWRN1	rs8040033:24762411:G:C	1	THCA	0
ENSG00000259905	PWRN1	rs12592162:24801204:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs12592029:24806523:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs8033941:24513866:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs8026878:24763025:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs7496465:24764695:A:T	0		1	THCA
ENSG00000259905	PWRN1	rs35149769:24836878:A:C	1	THCA	0
ENSG00000259905	PWRN1	rs3110065:24562481:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs57497203:24782463:C:A	0		1	THCA
ENSG00000259905	PWRN1	rs34782015:24652684:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12913773:24668698:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs35023984:24662688:C:CAT	0		1	THCA
ENSG00000259905	PWRN1	rs34469274:24607259:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs35871758:24608760:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs12185097:24649604:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12903675:24759511:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs71461546:24797295:G:C	1	THCA	0
ENSG00000259905	PWRN1	rs11161118:24841731:A:T	1	THCA	0
ENSG00000259905	PWRN1	rs200128363:24827231:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12909716:24583909:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs28373415:24778937:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs4073701:24844912:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs28627416:24778026:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs12904707:24787744:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs12592608:24731882:C:T	0		1	THCA
ENSG00000259905	PWRN1	rs7172311:24734005:T:C	0		1	THCA
ENSG00000259905	PWRN1	rs56709690:24542840:C:T	0		1	THCA
ENSG00000259905	PWRN1	rs56988360:24763168:CA:C	1	THCA	0
ENSG00000259905	PWRN1	rs7172269:24844087:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs7403053:24789762:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs35358454:24531236:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs13329120:24842673:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12913181:24727994:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs11161096:24730794:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7173053:24736818:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs74003231:24734737:C:A	0		1	THCA
ENSG00000259905	PWRN1	rs11856027:24733527:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7496714:24846188:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs9920852:24796165:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs138524156:24842619:AG:A	1	THCA	0
ENSG00000259905	PWRN1	rs8042387:24820878:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs28707761:24791816:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs28394551:24648777:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs8031555:24842740:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs34422287:24541412:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs12914445:24637324:G:T	1	THCA	0
ENSG00000259905	PWRN1	rs6576351:24838255:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12913957:24811516:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12324726:24798664:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7182159:24812070:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs8029180:24656036:T:C	0		1	THCA
ENSG00000259905	PWRN1	rs6576304:24641616:A:G	0		1	THCA
ENSG00000259905	PWRN1	rs6576348:24823338:C:G	1	THCA	0
ENSG00000259905	PWRN1	rs6576349:24823401:T:A	1	THCA	0
ENSG00000259905	PWRN1	rs6576350:24823538:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs12593399:24808660:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12900092:24796959:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7173001:24844047:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs11633507:24786092:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs79355374:24842967:CAGCAACACTAAT:C	1	THCA	0
ENSG00000259905	PWRN1	rs11637070:24758045:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs11632304:24758046:A:G	1	THCA	0
ENSG00000259905	PWRN1	rs11636595:24725021:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs7495295:24654599:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs6576321:24783335:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs7179453:24802893:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12903376:24824313:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs12901480:24791872:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs12913246:24815833:T:C	1	THCA	0
ENSG00000259905	PWRN1	rs61181729:24555080:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs7402670:24806371:G:C	1	THCA	0
ENSG00000259905	PWRN1	rs28404629:24778262:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs56689020:24555106:C:G	0		1	THCA
ENSG00000259905	PWRN1	rs7497431:24816570:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs7172595:24800344:T:G	1	THCA	0
ENSG00000259905	PWRN1	rs11852877:24805664:C:T	1	THCA	0
ENSG00000259905	PWRN1	rs34726019:24847230:G:A	1	THCA	0
ENSG00000259905	PWRN1	rs7167211:24800374:C:A	1	THCA	0
ENSG00000259905	PWRN1	rs56124978:24538137:G:A	0		1	THCA
ENSG00000259905	PWRN1	rs74005703:24539246:A:T	0		1	THCA
ENSG00000259905	PWRN1	rs28532925:24540383:A:G	0		1	THCA

Top

lncRNAs regulate the target genes through functioning as enhancers

lncRNA regulates differentially expressed genes by function as enhancer.

LncRNA Ensembl ID

PC Gene ID

PC Gene Name

Positive correlated cancers

Cancer with PC gene up-regulation

Cancer with PC gene down-regulation

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lncRNAs regulate the target genes through recruiting transcript factors

LncRNA-TF complex positively regulates the gene expression by target promoter region (#cancer types with positive correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

LncRNA-TF complex negatively regulates the gene expression by target promoter region (#cancer types with negative correlation >= 5).

lncRNA ID

TF ID

TF Name

PCgene ID

PCgene Name

Number of Cancer

Canaer Types

Top

lncRNAs regulate the alternative splicing event through interacting with splicing factor

LncRNA-RBP complex positively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

LncRNA-RBP complex negatively regulates the exon skippping events by target skipped eoxon region.

LncRNA Ensembl ID

RBP ID

RBP Gene Name

Exon Skipping ID

Skipped Exon

EX Gene Name

EX Affected TransID

ORF_anno

Cancer Type

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lncRNAs regulate mRNA through targeting the 3'-UTR region

lncRNA regulates differential expressed mRNA by directly targeting 3' UTR region.

LncRNA Ensembl ID

LncRNA ENST ID

PC Gene Name

PC Gene ID

PC ENST ID

nDG

Cancer with PC gene up-regulation

Cancer with PC gene Down-regulation

Top

lncRNAs regulate mRNA by competing with miRNA

lncRNA regulates mRNA by competing the miRNA binding site with mRNA.

LncRNA Ensembl ID

lncRNA-miRNA-mRNA

Cancer Types

Top

lncRNA coding potential

ORFfinder result for the gencode.v22.lncRNA.transcript.fa.

lncRNA Ensembl ID	lncRNA ENST ID	length(AA)	start at transcript	end at transcript
ENSG00000259905.4	ENST00000565893.1	93	7	288
ENSG00000259905.4	ENST00000565512.4	82	6	254
ENSG00000259905.4	ENST00000562244.1	75	207	431
ENSG00000259905.4	ENST00000568045.4	80	123	362
ENSG00000259905.4	ENST00000565295.4	93	12	293
ENSG00000259905.4	ENST00000568609.4	67	58	261
ENSG00000259905.4	ENST00000569908.1	99	1315	1016
ENSG00000259905.4	ENST00000567647.4	86	326	66
ENSG00000259905.4	ENST00000565241.1	64	368	559
ENSG00000259905.4	ENST00000562501.1	81	463	218
ENSG00000259905.4	ENST00000564898.1	46	520	380
ENSG00000259905.4	ENST00000568019.1	43	130	2

	lncRNA summary
	lncRNA structure and expression level
	lncRNA-Protein interaction
	lncRNA-DNA interaction
	lncRNA-RNA interaction
	Variants in lncRNA
	lncRNAs regulate the target genes through functioning as enhancers
	lncRNAs regulate the target genes through recruiting transcript factors
	lncRNAs regulate the alternative splicing events through interacting with splicing factor
	lncRNAs regulate mRNA through targeting the 3'-UTR region
	lncRNAs regulate mRNA by competing with miRNA
	lncRNA coding potential