|
||||||
|
lncRNA: ENSG00000250467 |
Summary for PHOX2B-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000250467 | Gene symbol | PHOX2B-AS1 |
| Gene name | PHOX2B antisense RNA 1 | |
| HGNC | 40457 | |
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | RP11-227F19.1|PHOX2B-AS1|04p13 | |
| UniProtAcc |
Top |
Structure and expression level for PHOX2B-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
 |
| Differentially expressed gene analysis between cancer and normal samples. |
 |
| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000250467 | 9.875136e+01 | 7.202138e+00 | 1.209066e+00 | 5.956778e+00 | 2.570000e-09 | 1.710000e-07 | UP | PCPG |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
Top |
lncRNA-Protein interaction for PHOX2B-AS1 |
 |
| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
Top |
|
