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Gene: ENSG00000090905 |
Summary for TNRC6A |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000090905 | Gene symbol | TNRC6A |
| Gene name | trinucleotide repeat containing adaptor 6A | |
| HGNC | 11969 | |
| Entrez ID | 27327 | |
| Gene type | protein_coding | |
| Synonyms | TNRC6A|CAGH26|KIAA1460|GW182 | |
| UniProtAcc | Q8NDV7 |
| Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
| Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
Top |
Structure and expression level for TNRC6A |
| AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure. ∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
 |
| Landscape of gene expressions across multiple cancer types. |
 |
| Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor female and normal female samples. |
 |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| TNRC6A | 4.45e+03 | 1.19e+00 | 1.86e-01 | 6.39e+00 | 1.70e-10 | 1.14e-09 | KICH |
Top |
Sex-biased somatic mutation for TNRC6A |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
Top |
DNA methylation with beta values for TNRC6A |
| Landscape of DNA methylation across multiple cancer types. |
 |
| Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
Top |
Exon skipping events with PSI in TCGA for TNRC6A |
| ∗Please access ExonSkipDB for exon skipping annotation. |
| Landscape of exon skipping events across multiple cancer types. |
 |
| Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| THCA | exon_skip_134787 | 1.75e-01 | 2.83e-01 | -3.09e+00 | 2.01e-03 | 4.90e-03 | -1.07e-01 |
Top |
RNA A-to-I editing events in TCGA for TNRC6A |
| ∗Please access CAeditome for RNA editing annotation. |
| Landscape of RNA editing events across multiple cancer types. |
 |
| Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| COAD | TNRC6A-019 | chr16_24742680_+ | 3.76e-01 | 5.02e-01 | -2.57e+00 | 1.01e-02 | 2.29e-02 | -1.26e-01 |
| COAD | TNRC6A-019 | chr16_24746279_+ | 4.11e-01 | 2.77e-01 | 2.01e+00 | 4.49e-02 | 4.80e-02 | 1.34e-01 |
| Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
Top |
Sex-biased TF-Gene network for TNRC6A |
| TFs related to TNRC6A. ∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
 |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| BLCA | ALX1 | TNRC6A | 3.24e+00 | 4.35e-03 | 4.30e+00 | 9.85e-01 | Female-biased |
| BLCA | ALX3 | TNRC6A | 3.81e+00 | 1.33e-02 | 4.59e+00 | 9.80e-01 | Female-biased |
| BLCA | ALX4 | TNRC6A | 3.78e+00 | 1.27e-02 | 4.57e+00 | 9.81e-01 | Female-biased |
| BLCA | ARGFX | TNRC6A | 3.56e+00 | 8.78e-03 | 4.44e+00 | 9.83e-01 | Female-biased |
| BLCA | DRGX | TNRC6A | 3.39e+00 | 7.27e-03 | 4.32e+00 | 9.82e-01 | Female-biased |
| BLCA | FOXR2 | TNRC6A | 2.39e+00 | 5.21e-04 | 3.99e+00 | 9.83e-01 | Female-biased |
| BLCA | ISX | TNRC6A | 3.40e+00 | 7.62e-03 | 4.31e+00 | 9.82e-01 | Female-biased |
| BLCA | PHOX2A | TNRC6A | 3.57e+00 | 6.72e-03 | 4.51e+00 | 9.86e-01 | Female-biased |
| BLCA | PHOX2B | TNRC6A | 3.22e+00 | 3.70e-03 | 4.31e+00 | 9.86e-01 | Female-biased |
| BLCA | POU4F2 | TNRC6A | 2.91e+00 | 3.29e-03 | 4.03e+00 | 9.81e-01 | Female-biased |
| BLCA | PROP1 | TNRC6A | 3.85e+00 | 1.32e-02 | 4.64e+00 | 9.81e-01 | Female-biased |
| BLCA | PRRX1 | TNRC6A | 3.46e+00 | 9.15e-03 | 4.33e+00 | 9.81e-01 | Female-biased |
| BLCA | UNCX | TNRC6A | 3.36e+00 | 7.78e-03 | 4.27e+00 | 9.81e-01 | Female-biased |
| BLCA | ZNF25 | TNRC6A | 2.48e+00 | 8.17e-04 | 3.96e+00 | 9.81e-01 | Female-biased |
| BLCA | ZNF334 | TNRC6A | 2.51e+00 | 1.92e-04 | 4.38e+00 | 9.91e-01 | Female-biased |
| BLCA | ZNF354B | TNRC6A | 2.95e+00 | 3.05e-03 | 4.09e+00 | 9.82e-01 | Female-biased |
| BLCA | ZNF418 | TNRC6A | 1.96e+00 | 3.52e-05 | 4.24e+00 | 9.89e-01 | Female-biased |
| BLCA | ZNF580 | TNRC6A | 3.11e+00 | 3.72e-03 | 4.20e+00 | 9.84e-01 | Female-biased |
| BLCA | ZNF79 | TNRC6A | 2.46e+00 | 3.25e-04 | 4.19e+00 | 9.87e-01 | Female-biased |
| BLCA | ZNF879 | TNRC6A | 2.18e+00 | 1.98e-04 | 4.04e+00 | 9.84e-01 | Female-biased |
| TNRC6A related gene. ∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
Top |
Sex-biased RBP-ES network for TNRC6A |
| RBPs related to ES in TNRC6A. ∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
 |
| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| STAD | SAMD4A | exon_skip_134796 | 8.20e+00 | 1.35e-02 | 8.52e+00 | 9.80e-01 | Female-biased |
| THYM | G3BP2 | exon_skip_134801 | 9.25e+00 | 9.87e-01 | 8.93e+00 | 9.84e-03 | Male-biased |
| KIRP | G3BP2 | exon_skip_134801 | 9.34e+00 | 9.87e-01 | 9.01e+00 | 9.64e-03 | Male-biased |
| THCA | DAZAP1 | exon_skip_134792 | 1.53e+01 | 9.99e-01 | 1.48e+01 | 5.13e-04 | Male-biased |
| THCA | SAMD4A | exon_skip_134796 | 8.72e+00 | 9.94e-01 | 8.15e+00 | 2.65e-04 | Male-biased |
| TNRC6A related ES. ∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
Top |
Sex-biased CeRNA regulation of gene |
| Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
| ENSG00000090905 | AC073957.3,hsa-mir-150,TNRC6A | Female-specific ceRNA | TCGA-KICH |
| ENSG00000090905 | AC084018.2,hsa-mir-150,TNRC6A | Female-specific ceRNA | TCGA-KICH |
| ENSG00000090905 | AC026362.1,hsa-mir-150,TNRC6A | Female-specific ceRNA | TCGA-KICH |
| ENSG00000090905 | HEXD-IT1,hsa-mir-150,TNRC6A | Female-specific ceRNA | TCGA-KICH |
| ENSG00000090905 | AC105339.2,hsa-mir-26b,TNRC6A | Female-specific ceRNA | TCGA-KICH |
Top |
Sex-biased eQTL regulation of gene |
| Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
| Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs72770196 | chr16:15608177:T:C | - | 0.281236038761611 | 0.0365040439725596 | KIRP | Female-baised eQTL |
| rs72770197 | chr16:15608203:C:T | - | 0.281236038761611 | 0.0365040439725596 | KIRP | Female-baised eQTL |
| rs3935714 | chr16:29030693:G:A | - | 0.109156786822291 | 0.0029954380504552 | LUAD | Female-baised eQTL |
| rs62029847 | chr16:26985348:C:T | - | 0.0703322843882195 | 0.00428205034161463 | LUAD | Female-baised eQTL |
| rs35146084 | chr16:26979572:G:A | - | 0.0691896040915522 | 0.00442757325202046 | LUAD | Female-baised eQTL |
| rs11643144 | chr16:26988503:C:A | - | 0.0702806838558234 | 0.00467927357293432 | LUAD | Female-baised eQTL |
| rs62029811 | chr16:26974355:G:A | - | 0.0689144940143002 | 0.00467987784862052 | LUAD | Female-baised eQTL |
| rs72782096 | chr16:26233673:A:T | - | 0.117514555683136 | 0.00528559600029593 | LUAD | Female-baised eQTL |
| rs11645528 | chr16:26978276:G:A | - | 0.0675303335327278 | 0.00621344423224289 | LUAD | Female-baised eQTL |
| rs12932818 | chr16:29132106:T:A | - | 0.116272867360838 | 0.00621816075927962 | LUAD | Female-baised eQTL |
| rs36028249 | chr16:29107443:C:T | - | 0.116221659627107 | 0.00627477745603025 | LUAD | Female-baised eQTL |
| rs11074822 | chr16:26982566:C:T | - | 0.0639627224245346 | 0.0117595677445325 | LUAD | Female-baised eQTL |
| rs222117 | chr16:15415189:G:A | - | 0.0795739416672593 | 0.0118855877753341 | LUAD | Female-baised eQTL |
| rs540916 | chr16:15418948:T:C | - | 0.0781011307849979 | 0.0127811662138875 | LUAD | Female-baised eQTL |
| rs11648099 | chr16:26973014:T:A | - | 0.0627934381747687 | 0.0129636088476879 | LUAD | Female-baised eQTL |
| rs692321 | chr16:15413069:G:T | - | 0.0781764112284551 | 0.0136696994855522 | LUAD | Female-baised eQTL |
| rs222119 | chr16:15417688:A:C | - | 0.077165691960397 | 0.013812240106019 | LUAD | Female-baised eQTL |
| rs4350576 | chr16:26971719:G:C | - | 0.0625517156021868 | 0.0138988958943675 | LUAD | Female-baised eQTL |
| rs62029810 | chr16:26972733:A:C | - | 0.0625517156021868 | 0.0138988958943675 | LUAD | Female-baised eQTL |
| rs864114 | chr16:15414191:G:A | - | 0.0781678213777529 | 0.0139592984721029 | LUAD | Female-baised eQTL |
| rs420414 | chr16:24131526:A:G | - | 0.0480320642805367 | 0.0172927037516136 | LUAD | Female-baised eQTL |
| rs7192342 | chr16:25636692:G:A | - | 0.0598075431480923 | 0.0175671759570308 | LUAD | Female-baised eQTL |
| rs13338461 | chr16:25446934:C:T | - | 0.0456031491204926 | 0.0184547900797778 | LUAD | Female-baised eQTL |
| rs60801698 | chr16:23492752:T:A | - | 0.0913541118962366 | 0.0210590104226728 | LUAD | Female-baised eQTL |
| rs62029564 | chr16:23962985:A:G | - | 0.0800230118523714 | 0.0219236400161004 | LUAD | Female-baised eQTL |
| rs1034600 | chr16:24206713:C:T | - | 0.0576211247420947 | 0.0220548535939898 | LUAD | Female-baised eQTL |
| rs11074689 | chr16:25450446:A:G | - | 0.0444113645962752 | 0.0222829164284846 | LUAD | Female-baised eQTL |
| rs62029569 | chr16:23969292:C:A | - | 0.0782225741617538 | 0.0234280089392101 | LUAD | Female-baised eQTL |
| rs62029570 | chr16:23971648:G:A | - | 0.0782225741617538 | 0.0234280089392101 | LUAD | Female-baised eQTL |
| rs62029571 | chr16:23972182:C:T | - | 0.0782225741617538 | 0.0234280089392101 | LUAD | Female-baised eQTL |
| rs62029572 | chr16:23972369:A:T | - | 0.0782225741617538 | 0.0234280089392101 | LUAD | Female-baised eQTL |
| rs62029573 | chr16:23973205:A:G | - | 0.0782225741617538 | 0.0234280089392101 | LUAD | Female-baised eQTL |
| rs445620 | chr16:24131398:G:T | - | 0.0455441147581 | 0.0246316560937248 | LUAD | Female-baised eQTL |
| rs67814263 | chr16:26216557:G:A | - | 0.0731250282566946 | 0.024886915540684 | LUAD | Female-baised eQTL |
| rs10852263 | chr16:24210437:C:T | - | 0.056316117737049 | 0.0250659616244233 | LUAD | Female-baised eQTL |
| rs72779994 | chr16:24206993:C:T | - | 0.0568341393281867 | 0.0273682089422385 | LUAD | Female-baised eQTL |
| rs78358255 | chr16:23977512:A:G | - | 0.0766060120238018 | 0.0274053420842105 | LUAD | Female-baised eQTL |
| rs10492797 | chr16:24203631:T:G | - | 0.0569236083800667 | 0.0276269039216106 | LUAD | Female-baised eQTL |
| rs72779992 | chr16:24205235:C:T | - | 0.0569236083800667 | 0.0276269039216106 | LUAD | Female-baised eQTL |
| rs60505201 | chr16:26220874:G:A | - | 0.0724516585130473 | 0.0287198401614584 | LUAD | Female-baised eQTL |
| rs72784204 | chr16:26247666:A:C | - | 0.081979521398279 | 0.0296838389612947 | LUAD | Female-baised eQTL |
| rs2943312 | chr16:25629694:T:C | - | 0.0535649221849877 | 0.0311830806404556 | LUAD | Female-baised eQTL |
| rs2966239 | chr16:25629779:A:G | - | 0.0535649221849877 | 0.0311830806404556 | LUAD | Female-baised eQTL |
| rs2966238 | chr16:25629833:A:G | - | 0.0535649221849877 | 0.0311830806404556 | LUAD | Female-baised eQTL |
| rs2910846 | chr16:25629916:T:G | - | 0.0535649221849877 | 0.0311830806404556 | LUAD | Female-baised eQTL |
| rs618404 | chr16:24134609:C:T | - | 0.044264385891406 | 0.0313178985451701 | LUAD | Female-baised eQTL |
| rs9934171 | chr16:23552764:C:T | - | 0.0891059983906362 | 0.0314390029223119 | LUAD | Female-baised eQTL |
| rs631751 | chr16:24135305:T:G | - | 0.0437410621521234 | 0.0316886788401164 | LUAD | Female-baised eQTL |
| rs9302412 | chr16:23543810:A:T | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs9302413 | chr16:23544019:T:C | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs13337717 | chr16:23546951:A:G | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs9937564 | chr16:23547158:A:T | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs58498035 | chr16:23553944:G:A | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs57549057 | chr16:23554023:G:A | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs1811175 | chr16:23558861:G:A | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs7199641 | chr16:23559425:G:T | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs11074567 | chr16:23565775:T:C | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs6497675 | chr16:23568783:G:A | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs3803720 | chr16:23571519:A:G | - | 0.087453870841744 | 0.0339336421096384 | LUAD | Female-baised eQTL |
| rs12446979 | chr16:25627973:A:G | - | 0.0530196473458263 | 0.0353415366138265 | LUAD | Female-baised eQTL |
| rs77282410 | chr16:23570949:A:T | - | 0.08817923917649 | 0.0356445394937227 | LUAD | Female-baised eQTL |
| rs375624 | chr16:24133707:A:T | - | 0.0428046692665853 | 0.0370640206267654 | LUAD | Female-baised eQTL |
| rs444853 | chr16:24132773:T:C | - | 0.0432897280825841 | 0.0372078898469497 | LUAD | Female-baised eQTL |
| rs8058566 | chr16:28264921:G:A | - | -0.0453804662608117 | 0.0383346505790067 | LUAD | Female-baised eQTL |
| rs2943309 | chr16:25631340:T:C | - | 0.0525246396855395 | 0.0384912894111128 | LUAD | Female-baised eQTL |
| rs365849 | chr16:24141288:A:G | - | 0.0435212906983676 | 0.03868087865627 | LUAD | Female-baised eQTL |
| rs439551 | chr16:24141384:C:T | - | 0.0435212906983676 | 0.03868087865627 | LUAD | Female-baised eQTL |
| rs2910847 | chr16:25631173:A:G | - | 0.0524413345476657 | 0.0401731097271234 | LUAD | Female-baised eQTL |
| rs2943310 | chr16:25631178:T:C | - | 0.0524413345476657 | 0.0401731097271234 | LUAD | Female-baised eQTL |
| rs1364011 | chr16:25631549:A:T | - | 0.0522820352744061 | 0.0410187242835941 | LUAD | Female-baised eQTL |
| rs198202 | chr16:24137720:A:G | - | 0.0421738763647674 | 0.0420203789123462 | LUAD | Female-baised eQTL |
| rs445104 | chr16:24135457:C:T | - | 0.0426022405246151 | 0.0432076720807121 | LUAD | Female-baised eQTL |
| rs9929514 | chr16:25616228:G:A | - | 0.0673318967668182 | 0.0451224662313498 | LUAD | Female-baised eQTL |
| rs380294 | chr16:24136270:T:G | - | 0.0416046359896699 | 0.0482165208452899 | LUAD | Female-baised eQTL |
| rs17663059 | chr16:18790261:C:T | - | 0.070649828594019 | 0.0485895779014531 | LUAD | Female-baised eQTL |
| rs9934032 | chr16:18791008:C:T | - | 0.070649828594019 | 0.0485895779014531 | LUAD | Female-baised eQTL |
| rs78210758 | chr16:30051870:G:A | - | 0.0648564593246098 | 0.0495126356068078 | LUAD | Female-baised eQTL |
| rs367772310 | chr16:18797228:A:T | - | 0.0710530640168211 | 0.0496225105872001 | LUAD | Female-baised eQTL |
| rs12446649 | chr16:25639895:A:G | - | 0.0520893239797314 | 0.0496398870769192 | LUAD | Female-baised eQTL |
| rs6497381 | chr16:19483286:C:T | - | 0.0994986309802383 | 0.00048819615061885 | COAD | Female-baised eQTL |
| rs13338528 | chr16:19478527:T:C | - | 0.0992989699374967 | 0.000498113759707616 | COAD | Female-baised eQTL |
| rs8063463 | chr16:19484989:A:G | - | 0.0989826955170477 | 0.000573115277576161 | COAD | Female-baised eQTL |
| rs55839016 | chr16:19491890:T:G | - | -0.0896824940985688 | 0.00072331180259395 | COAD | Female-baised eQTL |
| rs7193317 | chr16:19491480:C:G | - | -0.0891020886050976 | 0.000774150908070688 | COAD | Female-baised eQTL |
| rs7191783 | chr16:19473895:A:G | - | 0.0909863018482381 | 0.00327449206987263 | COAD | Female-baised eQTL |
| rs78926797 | chr16:19491341:C:A | - | -0.0826410635298021 | 0.00348754065419635 | COAD | Female-baised eQTL |
| rs11862080 | chr16:19475365:C:T | - | 0.0849908076290612 | 0.00711153631798716 | COAD | Female-baised eQTL |
| rs7200119 | chr16:19475096:T:G | - | 0.0848824436647244 | 0.00716367413946341 | COAD | Female-baised eQTL |
| rs11860379 | chr16:19489838:A:C | - | 0.081609472022392 | 0.00813262489693429 | COAD | Female-baised eQTL |
| rs8053201 | chr16:19475837:T:C | - | 0.0842540617320185 | 0.00816604182950191 | COAD | Female-baised eQTL |
| rs13330677 | chr16:19477061:A:G | - | 0.0842540617320185 | 0.00816604182950191 | COAD | Female-baised eQTL |
| rs9933337 | chr16:19522940:G:A | - | 0.0825086238967357 | 0.0143215696058048 | COAD | Female-baised eQTL |
| rs76447604 | chr16:19932321:C:A | - | 0.161431841375069 | 0.0173349338990545 | COAD | Female-baised eQTL |
| rs77214382 | chr16:19932481:A:G | - | 0.161431841375069 | 0.0173349338990545 | COAD | Female-baised eQTL |
| rs3764316 | chr16:19523377:T:C | - | 0.0811988002186092 | 0.0174390589976841 | COAD | Female-baised eQTL |
| rs1821912 | chr16:19530678:C:G | - | 0.0811988002186092 | 0.0174390589976841 | COAD | Female-baised eQTL |
| rs2856608 | chr16:19494429:G:A | - | -0.0806316068598077 | 0.0183065557242872 | COAD | Female-baised eQTL |
| rs7185465 | chr16:19472754:G:A | - | 0.078656074182019 | 0.0218695917907387 | COAD | Female-baised eQTL |
| rs3794697 | chr16:19508199:A:G | - | 0.0785579492256069 | 0.0233879985952597 | COAD | Female-baised eQTL |
| rs4780814 | chr16:19509859:A:G | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs7197660 | chr16:19509940:T:C | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2074169 | chr16:19510466:T:C | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2074170 | chr16:19510616:A:G | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs12923369 | chr16:19511072:A:G | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs6497383 | chr16:19512292:T:G | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs8053672 | chr16:19513444:T:C | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs11640077 | chr16:19513549:A:G | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs8057970 | chr16:19514219:C:T | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs8057980 | chr16:19514272:A:G | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2353913 | chr16:19515620:G:A | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2009787 | chr16:19516795:C:G | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2074172 | chr16:19517720:C:A | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs9932630 | chr16:19519126:T:C | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs9935304 | chr16:19519882:T:C | - | 0.0784283683719073 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs1475962 | chr16:19492276:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs1967951 | chr16:19492451:T:G | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs1967952 | chr16:19492506:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs8059121 | chr16:19493180:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs8058991 | chr16:19493229:A:G | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs1974448 | chr16:19493707:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs1475963 | chr16:19493960:G:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs1475964 | chr16:19494084:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2245423 | chr16:19494408:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs4421962 | chr16:19494530:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs7499214 | chr16:19494721:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs62026181 | chr16:19494917:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2856609 | chr16:19495451:G:A | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2856610 | chr16:19495709:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2856611 | chr16:19495877:G:A | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2187659 | chr16:19497251:A:G | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2187660 | chr16:19497261:C:G | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2521791 | chr16:19497502:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs1134662 | chr16:19498927:G:A | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2856613 | chr16:19499779:G:A | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2521793 | chr16:19500069:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2856614 | chr16:19500794:T:C | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs916073 | chr16:19501067:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2010416 | chr16:19501599:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs7135 | chr16:19503161:C:T | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs2285658 | chr16:19505581:G:A | - | -0.0784283683719072 | 0.0235570551143672 | COAD | Female-baised eQTL |
| rs8060280 | chr16:19530048:A:T | - | 0.0791750772592094 | 0.0240142204921175 | COAD | Female-baised eQTL |
| rs8060735 | chr16:19530049:G:C | - | 0.0791750772592094 | 0.0240142204921175 | COAD | Female-baised eQTL |
| rs4783499 | chr16:22981846:A:T | - | 0.0818547733390521 | 0.0323459860317306 | COAD | Female-baised eQTL |
| rs7185961 | chr16:15761945:G:A | - | 0.115814336385127 | 0.0399614203364892 | COAD | Female-baised eQTL |
| rs2369688 | chr16:22949748:A:G | - | 0.082544006662764 | 0.0416779927069243 | COAD | Female-baised eQTL |
| rs9745837 | chr16:17327523:C:T | - | 0.126899637907949 | 0.0473135802255843 | COAD | Female-baised eQTL |
| rs8059179 | chr16:19493316:A:C | - | -0.0750110609505269 | 0.0475888150270213 | COAD | Female-baised eQTL |
| rs4782251 | chr16:19491826:C:T | - | -0.0770780612068506 | 0.04870226928991 | COAD | Female-baised eQTL |
| Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs74012332 | chr16:23692439:G:T | - | 0.0594304420838741 | 0.0430998675803756 | LUSC | Male-baised eQTL |
| rs73555038 | chr16:25364735:A:G | - | 0.0509442978482822 | 0.000163060913733826 | BLCA | Male-baised eQTL |
| rs16974591 | chr16:25366676:A:G | - | 0.0509442978482822 | 0.000163060913733826 | BLCA | Male-baised eQTL |
| rs73553186 | chr16:25323952:G:A | - | 0.0498890589231047 | 0.000238900841694991 | BLCA | Male-baised eQTL |
| rs1423057 | chr16:25323258:G:T | - | 0.0469820554607267 | 0.000501409321452491 | BLCA | Male-baised eQTL |
| rs113061743 | chr16:25331966:G:A | - | 0.0469820554607267 | 0.000501409321452491 | BLCA | Male-baised eQTL |
| rs4967971 | chr16:23115852:T:C | - | 0.0526100445692513 | 0.00159416312843151 | BLCA | Male-baised eQTL |
| rs59978706 | chr16:25231671:C:T | - | 0.0552803496676522 | 0.00182781642535874 | BLCA | Male-baised eQTL |
| rs113705646 | chr16:25232232:G:A | - | 0.0552803496676522 | 0.00182781642535874 | BLCA | Male-baised eQTL |
| rs73551067 | chr16:25232388:C:T | - | 0.0552803496676522 | 0.00182781642535874 | BLCA | Male-baised eQTL |
| rs78687077 | chr16:23081265:G:C | - | 0.051127566473157 | 0.00223044277072106 | BLCA | Male-baised eQTL |
| rs117741460 | chr16:23081498:C:T | - | 0.051127566473157 | 0.00223044277072106 | BLCA | Male-baised eQTL |
| rs74683538 | chr16:23088618:A:C | - | 0.051127566473157 | 0.00223044277072106 | BLCA | Male-baised eQTL |
| rs146519374 | chr16:23096715:A:T | - | 0.051127566473157 | 0.00223044277072106 | BLCA | Male-baised eQTL |
| rs78089576 | chr16:23099881:C:T | - | 0.051127566473157 | 0.00223044277072106 | BLCA | Male-baised eQTL |
| rs17797005 | chr16:23105707:T:C | - | 0.051127566473157 | 0.00223044277072106 | BLCA | Male-baised eQTL |
| rs73553158 | chr16:25260906:G:A | - | 0.0510939234032433 | 0.00319346066325607 | BLCA | Male-baised eQTL |
| rs61443132 | chr16:25271554:C:T | - | 0.0510939234032433 | 0.00319346066325607 | BLCA | Male-baised eQTL |
| rs73553168 | chr16:25281041:T:C | - | 0.0510701524319672 | 0.00323479776587232 | BLCA | Male-baised eQTL |
| rs113083920 | chr16:25276295:C:G | - | 0.0510197840425093 | 0.00326809951941358 | BLCA | Male-baised eQTL |
| rs61221104 | chr16:25246341:T:C | - | 0.0470632000076921 | 0.00741372546578889 | BLCA | Male-baised eQTL |
| rs61742723 | chr16:25247334:A:G | - | 0.0470632000076921 | 0.00741372546578889 | BLCA | Male-baised eQTL |
| rs73553142 | chr16:25252631:C:T | - | 0.0470632000076921 | 0.00741372546578889 | BLCA | Male-baised eQTL |
| rs72646473 | chr16:23181937:G:A | - | 0.0445398921121589 | 0.017434655710545 | BLCA | Male-baised eQTL |
| rs77291849 | chr16:23187818:G:A | - | 0.0432102618722238 | 0.0223676064324675 | BLCA | Male-baised eQTL |
| rs5737 | chr16:23189602:C:T | - | 0.0432102618722238 | 0.0223676064324675 | BLCA | Male-baised eQTL |
| rs67922443 | chr16:23918262:G:A | - | 0.0266723065159151 | 0.034018980664244 | BLCA | Male-baised eQTL |
| rs60055466 | chr16:23916119:T:C | - | 0.0261796444230695 | 0.0403455166465454 | BLCA | Male-baised eQTL |
| rs4967948 | chr16:23187923:G:A | - | 0.0387287378935174 | 0.0431460049880087 | BLCA | Male-baised eQTL |
| rs1709786 | chr16:27818730:C:A | - | 0.142973348505385 | 1.13059817833449e-07 | COAD | Male-baised eQTL |
| rs36028249 | chr16:29107443:C:T | - | 0.117324584695599 | 2.68398739447397e-05 | COAD | Male-baised eQTL |
| rs72789314 | chr16:31408382:G:A | - | 0.0855627503397558 | 7.21338327566886e-05 | COAD | Male-baised eQTL |
| rs12932818 | chr16:29132106:T:A | - | 0.111053812061749 | 9.44268603780196e-05 | COAD | Male-baised eQTL |
| rs7190786 | chr16:25745683:T:C | - | -0.10650132564043 | 0.000117168082102633 | COAD | Male-baised eQTL |
| rs8052630 | chr16:26248044:T:C | - | 0.0743718221364734 | 0.00016847644846189 | COAD | Male-baised eQTL |
| rs4559914 | chr16:25744270:G:T | - | -0.10303315043813 | 0.000192751215372519 | COAD | Male-baised eQTL |
| rs4411502 | chr16:25744312:T:C | - | -0.10303315043813 | 0.000192751215372519 | COAD | Male-baised eQTL |
| rs4632132 | chr16:25742660:C:T | - | -0.100830568836445 | 0.000319078445925344 | COAD | Male-baised eQTL |
| rs62036859 | chr16:26249260:T:C | - | 0.0705236450892918 | 0.000344929154812799 | COAD | Male-baised eQTL |
| rs4238919 | chr16:25743598:C:T | - | -0.0994451517520221 | 0.000377663677164807 | COAD | Male-baised eQTL |
| rs4238920 | chr16:25743711:A:G | - | -0.0994451517520221 | 0.000377663677164807 | COAD | Male-baised eQTL |
| rs4787752 | chr16:25743190:G:C | - | -0.0993558664143038 | 0.000381953552094034 | COAD | Male-baised eQTL |
| rs62037960 | chr16:26250541:T:C | - | 0.0698099508524382 | 0.000423647998440773 | COAD | Male-baised eQTL |
| rs4787751 | chr16:25743001:C:T | - | -0.0951527548334695 | 0.000735797815404282 | COAD | Male-baised eQTL |
| rs321432 | chr16:26789896:A:G | - | -0.0612687942826326 | 0.000956846049161468 | COAD | Male-baised eQTL |
| rs321433 | chr16:26790033:T:G | - | -0.0612137180768489 | 0.000981465613027588 | COAD | Male-baised eQTL |
| rs62030881 | chr16:26452011:C:A | - | 0.0756973783792887 | 0.000985688951815012 | COAD | Male-baised eQTL |
| rs62030885 | chr16:26454168:G:A | - | 0.0756973783792887 | 0.000985688951815012 | COAD | Male-baised eQTL |
| rs72786065 | chr16:26450385:C:A | - | 0.0757002906489986 | 0.000998494144653862 | COAD | Male-baised eQTL |
| rs62030886 | chr16:26455834:G:A | - | 0.0750671945129374 | 0.00109847426118587 | COAD | Male-baised eQTL |
| rs62030882 | chr16:26452813:C:T | - | 0.0732931744782345 | 0.00129243984878738 | COAD | Male-baised eQTL |
| rs62030892 | chr16:26466312:G:A | - | 0.0742201333715348 | 0.00129278779422893 | COAD | Male-baised eQTL |
| rs117952890 | chr16:26466913:A:G | - | 0.0742201333715348 | 0.00129278779422893 | COAD | Male-baised eQTL |
| rs62030887 | chr16:26456069:G:A | - | 0.0727235727822777 | 0.00142602787195087 | COAD | Male-baised eQTL |
| rs62030889 | chr16:26461711:G:A | - | 0.0719203543361892 | 0.00166699104181927 | COAD | Male-baised eQTL |
| rs9927116 | chr16:27933839:G:A | - | -0.0611369068797145 | 0.00180206546269987 | COAD | Male-baised eQTL |
| rs72786074 | chr16:26466268:C:T | - | 0.0723714895257207 | 0.0019008382605507 | COAD | Male-baised eQTL |
| rs12928435 | chr16:26380573:G:A | - | 0.0716058833683311 | 0.002039293678824 | COAD | Male-baised eQTL |
| rs16975879 | chr16:26462782:T:C | - | 0.0699401188687792 | 0.00214323312269993 | COAD | Male-baised eQTL |
| rs62030890 | chr16:26463734:G:A | - | 0.0699401188687792 | 0.00214323312269993 | COAD | Male-baised eQTL |
| rs62030891 | chr16:26463786:T:A | - | 0.0699401188687792 | 0.00214323312269993 | COAD | Male-baised eQTL |
| rs504937 | chr16:26796101:T:C | - | -0.057995728365233 | 0.00248392974117966 | COAD | Male-baised eQTL |
| rs34236905 | chr16:26383955:T:A | - | 0.0706248502240808 | 0.00257702930225501 | COAD | Male-baised eQTL |
| rs61541684 | chr16:20847426:A:G | - | 0.104396504999185 | 0.00353807543273889 | COAD | Male-baised eQTL |
| rs35625 | chr16:16075709:C:T | - | -0.0570864953761207 | 0.00388478474261891 | COAD | Male-baised eQTL |
| rs4467079 | chr16:25869873:T:C | - | 0.0967305913009523 | 0.00579760552339385 | COAD | Male-baised eQTL |
| rs705927 | chr16:27830516:A:C | - | 0.0528401258275263 | 0.00608083380322245 | COAD | Male-baised eQTL |
| rs193538 | chr16:16034059:G:T | - | -0.0557884669864859 | 0.00778833886862479 | COAD | Male-baised eQTL |
| rs80210394 | chr16:22361127:G:A | - | 0.0859520371107789 | 0.00947936513936955 | COAD | Male-baised eQTL |
| rs1644613 | chr16:27818226:C:T | - | 0.0546282721319717 | 0.0120090888967774 | COAD | Male-baised eQTL |
| rs61553930 | chr16:27901493:C:T | - | 0.0897630837582586 | 0.0142943914971124 | COAD | Male-baised eQTL |
| rs17774978 | chr16:26194942:C:T | - | 0.0601141510793148 | 0.0151849467821763 | COAD | Male-baised eQTL |
| rs11645840 | chr16:26282907:A:G | - | 0.0554316570747946 | 0.0190557919232113 | COAD | Male-baised eQTL |
| rs79123822 | chr16:27900252:C:T | - | 0.0864493789687248 | 0.0198212089182045 | COAD | Male-baised eQTL |
| rs605840 | chr16:26788876:A:G | - | 0.0493767019415275 | 0.0257956448772368 | COAD | Male-baised eQTL |
| rs889203 | chr16:20039336:C:T | - | -0.0456110541417331 | 0.0267751688050252 | COAD | Male-baised eQTL |
| rs605824 | chr16:26788871:T:C | - | 0.0491484121353644 | 0.0270815093302883 | COAD | Male-baised eQTL |
| rs56120735 | chr16:26282311:G:A | - | 0.0531320052620681 | 0.0272237731728468 | COAD | Male-baised eQTL |
| rs56235909 | chr16:26282314:G:A | - | 0.0531320052620681 | 0.0272237731728468 | COAD | Male-baised eQTL |
| rs11640626 | chr16:27884897:C:T | - | 0.103529548591593 | 0.0283377449114018 | COAD | Male-baised eQTL |
| rs114808089 | chr16:27888354:C:G | - | 0.103529548591593 | 0.0283377449114018 | COAD | Male-baised eQTL |
| rs77582116 | chr16:27888402:T:C | - | 0.103529548591593 | 0.0283377449114018 | COAD | Male-baised eQTL |
| rs35622 | chr16:16075205:G:A | - | -0.049631523676193 | 0.0298618483535292 | COAD | Male-baised eQTL |
| rs17185243 | chr16:26827157:T:A | - | 0.055653783186805 | 0.0310695029148449 | COAD | Male-baised eQTL |
| rs488477 | chr16:26788919:T:G | - | 0.0479261374265253 | 0.0322398153099039 | COAD | Male-baised eQTL |
| rs605939 | chr16:26788947:C:G | - | 0.0479261374265253 | 0.0322398153099039 | COAD | Male-baised eQTL |
| rs4787382 | chr16:26573295:C:T | - | 0.059736445981903 | 0.0331337507446111 | COAD | Male-baised eQTL |
| rs57919337 | chr16:26569887:C:A | - | 0.0589442040664604 | 0.0377837404308339 | COAD | Male-baised eQTL |
| rs60939511 | chr16:24523059:A:T | - | 0.0490298633880734 | 0.0393176890868426 | COAD | Male-baised eQTL |
| rs17200257 | chr16:26577835:G:A | - | 0.0578517363991303 | 0.0394792991278037 | COAD | Male-baised eQTL |
| rs8059556 | chr16:24532647:C:G | - | 0.0479077161528627 | 0.043352490674139 | COAD | Male-baised eQTL |
| rs988043 | chr16:26793516:G:A | - | -0.0497307498087689 | 0.0435661571668656 | COAD | Male-baised eQTL |
| rs28446229 | chr16:26289172:T:A | - | 0.0531021323655308 | 0.0436819947424321 | COAD | Male-baised eQTL |
| rs62033216 | chr16:26372416:C:T | - | 0.0593165738697465 | 0.044240282456002 | COAD | Male-baised eQTL |
| rs58015106 | chr16:22344780:C:T | - | 0.0603545737369322 | 0.0455336437140618 | COAD | Male-baised eQTL |
| rs12596140 | chr16:24530543:T:A | - | 0.0476836058776373 | 0.0457154712079551 | COAD | Male-baised eQTL |
| rs72783886 | chr16:24530911:G:A | - | 0.0476836058776373 | 0.0457154712079551 | COAD | Male-baised eQTL |
| rs17637747 | chr16:26518118:G:A | - | 0.0431891629455741 | 0.0462499329925327 | COAD | Male-baised eQTL |
| rs1522443 | chr16:26791406:A:G | - | -0.0492259255219119 | 0.0466062628370487 | COAD | Male-baised eQTL |
| rs1476513 | chr16:26791794:C:T | - | -0.0492259255219119 | 0.0466062628370487 | COAD | Male-baised eQTL |
| rs8046339 | chr16:24527292:C:T | - | 0.0469777342047858 | 0.0474560627597658 | COAD | Male-baised eQTL |
| rs9940571 | chr16:24524402:T:C | - | 0.0467138646838179 | 0.0499842194304358 | COAD | Male-baised eQTL |
| rs56233344 | chr16:24525013:T:C | - | 0.0467138646838179 | 0.0499842194304358 | COAD | Male-baised eQTL |
| rs12935760 | chr16:24525219:T:C | - | 0.0467138646838179 | 0.0499842194304358 | COAD | Male-baised eQTL |
| rs9933090 | chr16:24525939:C:T | - | 0.0467138646838179 | 0.0499842194304358 | COAD | Male-baised eQTL |
| rs55902318 | chr16:24527221:A:G | - | 0.0467138646838179 | 0.0499842194304358 | COAD | Male-baised eQTL |
| Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
| Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
| eQTM | Description |
| Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
| Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
| Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs141353141 | chr16:24274053:G:T | Distant upstream | -0.0288021601481089 | 0.0465771620240091 | LUAD | Female-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs11866573 | chr16:24275336:C:T | Distant upstream | -0.0285463461595343 | 0.0485175565880385 | LUAD | Female-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs9926562 | chr16:24283998:T:C | Distant upstream | -0.0285463461595343 | 0.0485175565880385 | LUAD | Female-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs28433134 | chr16:24285905:G:A | Distant upstream | -0.0285463461595343 | 0.0485175565880385 | LUAD | Female-baised sQTL |
| exon_skip_134792 | chr16:24804704:24804851 | In-frame | rs11646839 | chr16:24437238:G:T | Distant upstream | 0.0320811839923368 | 0.049696318440495 | LGG | Female-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs205171 | chr16:25576663:G:T | Distant downstream | -0.0631268080554629 | 0.046513475544161 | COAD | Female-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs205185 | chr16:25565906:T:C | Distant downstream | -0.05491298496338 | 0.0470660373358767 | COAD | Female-baised sQTL |
| Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs416951 | chr16:24146249:A:T | Distant upstream | -0.0260770671052804 | 0.00112061791146997 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs198203 | chr16:24138954:C:T | Distant upstream | -0.0264698324245559 | 0.00121604452297534 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs198204 | chr16:24139015:C:G | Distant upstream | -0.0264698324245559 | 0.00121604452297534 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs365849 | chr16:24141288:A:G | Distant upstream | -0.0264853904245386 | 0.0012291788275504 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs439551 | chr16:24141384:C:T | Distant upstream | -0.0264853904245386 | 0.0012291788275504 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs169145 | chr16:24138528:T:C | Distant upstream | -0.0259733759939389 | 0.0015968573316251 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs388119 | chr16:24140416:A:G | Distant upstream | -0.0262212848561803 | 0.00171007380653872 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs364685 | chr16:24140944:A:C | Distant upstream | -0.0262212848561803 | 0.00171007380653872 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs412499 | chr16:24144484:T:C | Distant upstream | -0.0251286626195445 | 0.00206563343719222 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs365941 | chr16:24140642:C:T | Distant upstream | -0.0259267389302499 | 0.00219520156375842 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs372630 | chr16:24153169:C:G | Distant upstream | -0.0254920181550415 | 0.00225414936681548 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs387495 | chr16:24150711:G:T | Distant upstream | -0.0251374344939574 | 0.0023657118271626 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs198205 | chr16:24139470:T:C | Distant upstream | -0.0251566125084387 | 0.00252975490971175 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs403018 | chr16:24140299:A:G | Distant upstream | -0.0251566125084387 | 0.00252975490971175 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs198209 | chr16:24168800:T:C | Distant upstream | -0.0253907791777545 | 0.00257257843390142 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs375624 | chr16:24133707:A:T | Distant upstream | -0.0246053475680658 | 0.00286316079990952 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs198202 | chr16:24137720:A:G | Distant upstream | -0.0250648511448155 | 0.00313807794994512 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs198206 | chr16:24165256:A:G | Distant upstream | -0.0250620462308259 | 0.003152332196003 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs198207 | chr16:24166812:A:G | Distant upstream | -0.0250620462308259 | 0.003152332196003 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs398671 | chr16:24144081:A:G | Distant upstream | -0.0246540562732099 | 0.00379895828975708 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs385400 | chr16:24152277:G:A | Distant upstream | -0.0245933563383008 | 0.00382333046585419 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs384586 | chr16:24152278:A:G | Distant upstream | -0.0245933563383008 | 0.00382333046585419 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs408882 | chr16:24152967:T:G | Distant upstream | -0.0245933563383008 | 0.00382333046585419 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs380294 | chr16:24136270:T:G | Distant upstream | -0.0248021633450251 | 0.00386248194522739 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs398974 | chr16:24144186:A:G | Distant upstream | -0.0245606901320777 | 0.00389562454134191 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs406557 | chr16:24151115:A:T | Distant upstream | -0.0249953812271306 | 0.00399587449791062 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs618404 | chr16:24134609:C:T | Distant upstream | -0.0248960388547934 | 0.00458313441855292 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs400066 | chr16:24145849:G:A | Distant upstream | -0.0239949370753364 | 0.00472537009743286 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs432998 | chr16:24154809:T:C | Distant upstream | -0.0243073451643936 | 0.00478114747296656 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs802594 | chr16:24144317:C:T | Distant upstream | -0.0240038043072511 | 0.00479999899176863 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs412246 | chr16:24144390:T:C | Distant upstream | -0.0240038043072511 | 0.00479999899176863 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs399734 | chr16:24144405:A:T | Distant upstream | -0.0240038043072511 | 0.00479999899176863 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs450929 | chr16:24144443:C:T | Distant upstream | -0.0240038043072511 | 0.00479999899176863 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs395897 | chr16:24151061:G:C | Distant upstream | -0.0243047944513294 | 0.00486363571557125 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs406823 | chr16:24152504:G:A | Distant upstream | -0.0243047944513294 | 0.00486363571557125 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs609247 | chr16:24147176:C:T | Distant upstream | -0.0239555848414651 | 0.00490009009944155 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs802596 | chr16:24147403:C:T | Distant upstream | -0.0239555848414651 | 0.00490009009944155 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs405463 | chr16:24147718:A:G | Distant upstream | -0.0239555848414651 | 0.00490009009944155 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs370627 | chr16:24153983:C:T | Distant upstream | -0.0241549194863831 | 0.00534065558104578 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs444853 | chr16:24132773:T:C | Distant upstream | -0.024093490568983 | 0.00537426319292099 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs410688 | chr16:24144713:T:C | Distant upstream | -0.0237351174031689 | 0.00569889750419241 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs422093 | chr16:24154037:G:A | Distant upstream | -0.0240181233857243 | 0.00605129210897463 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs409556 | chr16:24154098:G:A | Distant upstream | -0.0240181233857243 | 0.00605129210897463 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs374747 | chr16:24154294:T:C | Distant upstream | -0.0240181233857243 | 0.00605129210897463 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs409636 | chr16:24154412:T:G | Distant upstream | -0.0240181233857243 | 0.00605129210897463 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs631751 | chr16:24135305:T:G | Distant upstream | -0.0243037387369911 | 0.00638113140924502 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs377133 | chr16:24153602:G:C | Distant upstream | -0.0242126365996814 | 0.00711818304680545 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs445104 | chr16:24135457:C:T | Distant upstream | -0.0241238216458219 | 0.00856304681047853 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs2078834 | chr16:24186199:A:G | Distant upstream | -0.0232297492065874 | 0.00901889258667849 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs445620 | chr16:24131398:G:T | Distant upstream | -0.0238947983136927 | 0.00939249031835002 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs183204 | chr16:24129738:G:A | Distant upstream | -0.0236479043576139 | 0.0110784162462532 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs430151 | chr16:24148013:G:C | Distant upstream | -0.0224245023643047 | 0.0120551465173675 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs169144 | chr16:24129767:A:G | Distant upstream | -0.0226897209169716 | 0.0181350535159739 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs420414 | chr16:24131526:A:G | Distant upstream | -0.0225604458944092 | 0.0230701020985527 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs2239344 | chr16:24185861:G:T | Distant upstream | -0.020991999159466 | 0.0276871473431521 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs432854 | chr16:24130986:T:C | Distant upstream | -0.0219514503764052 | 0.0285250837379629 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs71379850 | chr16:24167538:C:T | Distant upstream | -0.0240654374995983 | 0.0347446226734666 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs11644846 | chr16:24409218:T:C | Distant upstream | -0.0255396310931451 | 0.03720616343484 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs2283548 | chr16:24167921:T:C | Distant upstream | -0.023157613862539 | 0.0407284194905257 | LUAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs35022039 | chr16:24606221:T:C | Distant upstream | -0.047125606209556 | 0.0109591533143876 | LUSC | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs66743120 | chr16:24606996:T:C | Distant upstream | -0.047125606209556 | 0.0109591533143876 | LUSC | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs12928139 | chr16:24602532:G:A | Distant upstream | -0.0473281446135787 | 0.0114891920541544 | LUSC | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs6497847 | chr16:25359082:C:T | Distant downstream | 0.03704239849505 | 0.0396836932256686 | COAD | Male-baised sQTL |
| exon_skip_134789 | chr16:24795906:24795939 | In-frame | rs8054234 | chr16:25364505:A:G | Distant downstream | 0.0367757079501407 | 0.0403943085885985 | COAD | Male-baised sQTL |
| Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
Top |
Sex-biased sQTM regulation of gene |
| Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
| Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
Top |
Related disease information of TNRC6A |
| Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |
| ENSG00000090905 | TNRC6A | C0014550 | Myoclonic Epilepsy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0338478 | Idiopathic Myoclonic Epilepsy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0338479 | Symptomatic Myoclonic Epilepsy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0393695 | Early Childhood Epilepsy, Myoclonic | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0393702 | Myoclonic Astatic Epilepsy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0393703 | Myoclonic Absence Epilepsy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0438414 | Myoclonic Encephalopathy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0751120 | Benign Infantile Myoclonic Epilepsy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0751122 | Infantile Severe Myoclonic Epilepsy | 1 | CTD_human |
| ENSG00000090905 | TNRC6A | C0917800 | Epilepsy, Myoclonic, Infantile | 1 | CTD_human |
