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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: LPGAT1 (CAeditome ID:9926) |
Gene summary for LPGAT1 |
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Gene information | Gene symbol | LPGAT1 | Gene ID | 9926 |
Gene name | lysophosphatidylglycerol acyltransferase 1 | |
Synonyms | FAM34A|FAM34A1|NET8 | |
Cytomap | 1q32.3 | |
Type of gene | protein-coding | |
Description | acyl-CoA:lysophosphatidylglycerol acyltransferase 1acyl-CoA:monoacylglycerol acyltransferase LPGAT1family with sequence similarity 34, member A | |
Modification date | 20210518 | |
UniProtAcc | Q92604 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
LPGAT1 | GO:0005737 | Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 | 10942595 |
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RNA A-to-I events for LPGAT1 |
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CAediting_137175(211748412, -), CAediting_137176(211748440, -), CAediting_137177(211748441, -), CAediting_137178(211748455, -), CAediting_137179(211748536, -), CAediting_137180(211748553, -), CAediting_137181(211748557, -), CAediting_137182(211748573, -), CAediting_137183(211748585, -), CAediting_137184(211748602, -), CAediting_137185(211748638, -), CAediting_137186(211748671, -), CAediting_137187(211749868, -), CAediting_137188(211767236, -), CAediting_137189(211769898, -), CAediting_137190(211771045, -), CAediting_137191(211771667, -), CAediting_137192(211771729, -), CAediting_137193(211774202, -), CAediting_137194(211774207, -), CAediting_137195(211774222, -), CAediting_137196(211774231, -), CAediting_137197(211774232, -), CAediting_137198(211774240, -), CAediting_137199(211774241, -), CAediting_137200(211774248, -), CAediting_137201(211774250, -), CAediting_137202(211774277, -), CAediting_137203(211774281, -), CAediting_137204(211774285, -), CAediting_137205(211774286, -), CAediting_137206(211774290, -), CAediting_137207(211774292, -), CAediting_137208(211774293, -), CAediting_137209(211774294, -), CAediting_137210(211774295, -), CAediting_137211(211774296, -), CAediting_137212(211774299, -), CAediting_137213(211774310, -), CAediting_137214(211774330, -), CAediting_137215(211774335, -), CAediting_137216(211774336, -), CAediting_137217(211774358, -), CAediting_137218(211774372, -), CAediting_137219(211774383, -), CAediting_137220(211774388, -), CAediting_137221(211774389, -), CAediting_137222(211774405, -), CAediting_137223(211774407, -), CAediting_137224(211775766, -), CAediting_137225(211777831, -), CAediting_137226(211777890, -), CAediting_137227(211778519, -), CAediting_137228(211784447, -), CAediting_137229(211784932, -), CAediting_137230(211784942, -), CAediting_137231(211784968, -), CAediting_137232(211785763, -), CAediting_137233(211785784, -), CAediting_137234(211785785, -), CAediting_137235(211785786, -), CAediting_137236(211785789, -), CAediting_137237(211791496, -), CAediting_137238(211791700, -), CAediting_137239(211792794, -), CAediting_137240(211792808, -), CAediting_137241(211792809, -), CAediting_137242(211792822, -), CAediting_137243(211792840, -), CAediting_137244(211792876, -), CAediting_137245(211792883, -), CAediting_137246(211792885, -), CAediting_137247(211792887, -), CAediting_137248(211792888, -), CAediting_137249(211792890, -), CAediting_137250(211792894, -), CAediting_137251(211792905, -), CAediting_137252(211792906, -), CAediting_137253(211792913, -), CAediting_137254(211792915, -), CAediting_137255(211792938, -), CAediting_137256(211792947, -), CAediting_137257(211792982, -), CAediting_137258(211793501, -), CAediting_137259(211793659, -), CAediting_137260(211794329, -), CAediting_137261(211794334, -), CAediting_137262(211794374, -), CAediting_137263(211794384, -), CAediting_137264(211794410, -), CAediting_137265(211794413, -), CAediting_137266(211794430, -), CAediting_137267(211794434, -), CAediting_137268(211794440, -), CAediting_137269(211794468, -), CAediting_137270(211794472, -), CAediting_137271(211794473, -), CAediting_137272(211794474, -), CAediting_137273(211794477, -), CAediting_137274(211794480, -), CAediting_137275(211794482, -), CAediting_137276(211794488, -), CAediting_137277(211794501, -), CAediting_137278(211794502, -), CAediting_137279(211794555, -), CAediting_137280(211794564, -), CAediting_137281(211794595, -), CAediting_137282(211795532, -), CAediting_137283(211795640, -), CAediting_137284(211797011, -), CAediting_137285(211797012, -), CAediting_137286(211797026, -), CAediting_137287(211797038, -), CAediting_137288(211797088, -), CAediting_137289(211797091, -), CAediting_137290(211797093, -), CAediting_137291(211797126, -), CAediting_137292(211797173, -), CAediting_137293(211797174, -), CAediting_137294(211797180, -), CAediting_137295(211797234, -), CAediting_137296(211797399, -), CAediting_137297(211798467, -), CAediting_137298(211798468, -), CAediting_137299(211798512, -), CAediting_137300(211798516, -), CAediting_137301(211798556, -), CAediting_137302(211798562, -), CAediting_137303(211798568, -), CAediting_137304(211798572, -), CAediting_137305(211798598, -), CAediting_137306(211798601, -), CAediting_137307(211798623, -), CAediting_137308(211798631, -), CAediting_137309(211798650, -), CAediting_137310(211800073, -), CAediting_137311(211800132, -), CAediting_137312(211800137, -), CAediting_137313(211800156, -), CAediting_137314(211800167, -), CAediting_137315(211800173, -), CAediting_137316(211800179, -), CAediting_137317(211800202, -), CAediting_137318(211800230, -), CAediting_137319(211800235, -), CAediting_137320(211800240, -), CAediting_137321(211800255, -), CAediting_137322(211800264, -), CAediting_137323(211800288, -), CAediting_137324(211800293, -), CAediting_137325(211800294, -), CAediting_137326(211800300, -), CAediting_137327(211800302, -), CAediting_137328(211800316, -), CAediting_137329(211800326, -), CAediting_137330(211801458, -), CAediting_137331(211801490, -), CAediting_137332(211801493, -), CAediting_137333(211801494, -), CAediting_137334(211801538, -), CAediting_137335(211801583, -), CAediting_137336(211801592, -), CAediting_137337(211801621, -), CAediting_137338(211801625, -), CAediting_137339(211801626, -), CAediting_137340(211801656, -), CAediting_137341(211801835, -), CAediting_137342(211801868, -), CAediting_137343(211801914, -), CAediting_137344(211801917, -), CAediting_137345(211801976, -), CAediting_137346(211801980, -), CAediting_137347(211802002, -), CAediting_137348(211802005, -), CAediting_137349(211802006, -), CAediting_137350(211802019, -), CAediting_137351(211802025, -), CAediting_137352(211802054, -), CAediting_137353(211803791, -), CAediting_137354(211803802, -), CAediting_137355(211803813, -), CAediting_137356(211803818, -), CAediting_137357(211803828, -), CAediting_137358(211803829, -), CAediting_137359(211803833, -), CAediting_137360(211803837, -), CAediting_137361(211803858, -), CAediting_137362(211803872, -), CAediting_137363(211803882, -), CAediting_137364(211803891, -), CAediting_137365(211803923, -), CAediting_137366(211803937, -), CAediting_137367(211803941, -), CAediting_137368(211803947, -), CAediting_137369(211803952, -), CAediting_137370(211803953, -), CAediting_137371(211803954, -), CAediting_137372(211803955, -), CAediting_137373(211803960, -), CAediting_137374(211803962, -), CAediting_137375(211803963, -), CAediting_137376(211803971, -), CAediting_137377(211803986, -), CAediting_137378(211804001, -), CAediting_137379(211804005, -), CAediting_137380(211804031, -), CAediting_137381(211804032, -), CAediting_137382(211804040, -), CAediting_137383(211804103, -), CAediting_137384(211804145, -), CAediting_137385(211804149, -), CAediting_137386(211804151, -), CAediting_137387(211804170, -), CAediting_137388(211804188, -), CAediting_137389(211804212, -), CAediting_137390(211804227, -), CAediting_137391(211804249, -), CAediting_137392(211804250, -), CAediting_137393(211804254, -), CAediting_137394(211804273, -), CAediting_137395(211804277, -), CAediting_137396(211804301, -), CAediting_137397(211804329, -), CAediting_137398(211804339, -), CAediting_137399(211806003, -), CAediting_137400(211806015, -), CAediting_137401(211806042, -), CAediting_137402(211806043, -), CAediting_137403(211806080, -), CAediting_137404(211806094, -), CAediting_137405(211806097, -), CAediting_137406(211806112, -), CAediting_137407(211806138, -), CAediting_137408(211806152, -), CAediting_137409(211806177, -), CAediting_137410(211806224, -), CAediting_137411(211806226, -), CAediting_137412(211811536, -), CAediting_137413(211811671, -), CAediting_137414(211811674, -), CAediting_137415(211811675, -), CAediting_137416(211815851, -), CAediting_137417(211815907, -), CAediting_137418(211815911, -), CAediting_137419(211815917, -), CAediting_137420(211815943, -), CAediting_137421(211815953, -), CAediting_137422(211815986, -), CAediting_137423(211816045, -), CAediting_137424(211816062, -), CAediting_137425(211816076, -), CAediting_137426(211817306, -), CAediting_137427(211817328, -), CAediting_137428(211817329, -), CAediting_137429(211817900, -), CAediting_137430(211817963, -), CAediting_137431(211817979, -), CAediting_137432(211818005, -), CAediting_137433(211818008, -), CAediting_137434(211818027, -), CAediting_137435(211818028, -), CAediting_137436(211818062, -), CAediting_137437(211818107, -), CAediting_137438(211818108, -), CAediting_137439(211818116, -), CAediting_137440(211819234, -), CAediting_137441(211819237, -), CAediting_137442(211819251, -), CAediting_137443(211819272, -), CAediting_137444(211819299, -), CAediting_137445(211819309, -), CAediting_137446(211819378, -), CAediting_137447(211819379, -), CAediting_137448(211819456, -), CAediting_137449(211819458, -), CAediting_137450(211819459, -), CAediting_137451(211819742, -), CAediting_137452(211819768, -), CAediting_137453(211819781, -), CAediting_137454(211819901, -), CAediting_137455(211821090, -), CAediting_137456(211821134, -), CAediting_137457(211821148, -), CAediting_137458(211821170, -), CAediting_137459(211821242, -), CAediting_137460(211822520, -), CAediting_137461(211822695, -), CAediting_137462(211823720, -), CAediting_137463(211823878, -), CAediting_137464(211823883, -), CAediting_137465(211823888, -), CAediting_137466(211823909, -), CAediting_137467(211824248, -), CAediting_137468(211824274, -), CAediting_137469(211824284, -), CAediting_137470(211824296, -), CAediting_137471(211824303, -), CAediting_137472(211824309, -), CAediting_137473(211824314, -), CAediting_137474(211824320, -), CAediting_137475(211824333, -), CAediting_137476(211824334, -), CAediting_137477(211824336, -), CAediting_137478(211824339, -), CAediting_137479(211824360, -), CAediting_137480(211825227, -), CAediting_137481(211825238, -), CAediting_137482(211825254, -), CAediting_137483(211825264, -), CAediting_137484(211825270, -), CAediting_137485(211825281, -), CAediting_137486(211825284, -), CAediting_137487(211825289, -), CAediting_137488(211825294, -), CAediting_137489(211825297, -), CAediting_137490(211825307, -), CAediting_137491(211825308, -), CAediting_137492(211825312, -), CAediting_137493(211825313, -), CAediting_137494(211825320, -), CAediting_137495(211825321, -), CAediting_137496(211825323, -), CAediting_137497(211825329, -), CAediting_137498(211825330, -), CAediting_137499(211825338, -), CAediting_137500(211825348, -), CAediting_137501(211825352, -), CAediting_137502(211825356, -), CAediting_137503(211825848, -), CAediting_137504(211825877, -), CAediting_137505(211825897, -), |
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RNA editing positional annotations for LPGAT1 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_137175 | chr1_211748412_- | UTR3 |
CAediting_137176 | chr1_211748440_- | UTR3 |
CAediting_137177 | chr1_211748441_- | UTR3 |
CAediting_137178 | chr1_211748455_- | UTR3 |
CAediting_137179 | chr1_211748536_- | UTR3 |
CAediting_137180 | chr1_211748553_- | UTR3 |
CAediting_137181 | chr1_211748557_- | UTR3 |
CAediting_137182 | chr1_211748573_- | UTR3 |
CAediting_137183 | chr1_211748585_- | UTR3 |
CAediting_137184 | chr1_211748602_- | UTR3 |
CAediting_137185 | chr1_211748638_- | UTR3 |
CAediting_137186 | chr1_211748671_- | UTR3 |
CAediting_137187 | chr1_211749868_- | UTR3 |
CAediting_137188 | chr1_211767236_- | intronic |
CAediting_137189 | chr1_211769898_- | intronic |
CAediting_137190 | chr1_211771045_- | intronic |
CAediting_137191 | chr1_211771667_- | intronic |
CAediting_137192 | chr1_211771729_- | intronic |
CAediting_137193 | chr1_211774202_- | intronic |
CAediting_137194 | chr1_211774207_- | intronic |
CAediting_137195 | chr1_211774222_- | intronic |
CAediting_137196 | chr1_211774231_- | intronic |
CAediting_137197 | chr1_211774232_- | intronic |
CAediting_137198 | chr1_211774240_- | intronic |
CAediting_137199 | chr1_211774241_- | intronic |
CAediting_137200 | chr1_211774248_- | intronic |
CAediting_137201 | chr1_211774250_- | intronic |
CAediting_137202 | chr1_211774277_- | intronic |
CAediting_137203 | chr1_211774281_- | intronic |
CAediting_137204 | chr1_211774285_- | intronic |
CAediting_137205 | chr1_211774286_- | intronic |
CAediting_137206 | chr1_211774290_- | intronic |
CAediting_137207 | chr1_211774292_- | intronic |
CAediting_137208 | chr1_211774293_- | intronic |
CAediting_137209 | chr1_211774294_- | intronic |
CAediting_137210 | chr1_211774295_- | intronic |
CAediting_137211 | chr1_211774296_- | intronic |
CAediting_137212 | chr1_211774299_- | intronic |
CAediting_137213 | chr1_211774310_- | intronic |
CAediting_137214 | chr1_211774330_- | intronic |
CAediting_137215 | chr1_211774335_- | intronic |
CAediting_137216 | chr1_211774336_- | intronic |
CAediting_137217 | chr1_211774358_- | intronic |
CAediting_137218 | chr1_211774372_- | intronic |
CAediting_137219 | chr1_211774383_- | intronic |
CAediting_137220 | chr1_211774388_- | intronic |
CAediting_137221 | chr1_211774389_- | intronic |
CAediting_137222 | chr1_211774405_- | intronic |
CAediting_137223 | chr1_211774407_- | intronic |
CAediting_137224 | chr1_211775766_- | intronic |
CAediting_137225 | chr1_211777831_- | intronic |
CAediting_137226 | chr1_211777890_- | intronic |
CAediting_137227 | chr1_211778519_- | intronic |
CAediting_137228 | chr1_211784447_- | ncRNA_intronic |
CAediting_137229 | chr1_211784932_- | ncRNA_intronic |
CAediting_137230 | chr1_211784942_- | ncRNA_intronic |
CAediting_137231 | chr1_211784968_- | ncRNA_intronic |
CAediting_137232 | chr1_211785763_- | ncRNA_intronic |
CAediting_137233 | chr1_211785784_- | ncRNA_intronic |
CAediting_137234 | chr1_211785785_- | ncRNA_intronic |
CAediting_137235 | chr1_211785786_- | ncRNA_intronic |
CAediting_137236 | chr1_211785789_- | ncRNA_intronic |
CAediting_137237 | chr1_211791496_- | ncRNA_intronic |
CAediting_137238 | chr1_211791700_- | ncRNA_intronic |
CAediting_137239 | chr1_211792794_- | ncRNA_intronic |
CAediting_137240 | chr1_211792808_- | ncRNA_intronic |
CAediting_137241 | chr1_211792809_- | ncRNA_intronic |
CAediting_137242 | chr1_211792822_- | ncRNA_intronic |
CAediting_137243 | chr1_211792840_- | ncRNA_intronic |
CAediting_137244 | chr1_211792876_- | ncRNA_intronic |
CAediting_137245 | chr1_211792883_- | ncRNA_intronic |
CAediting_137246 | chr1_211792885_- | ncRNA_intronic |
CAediting_137247 | chr1_211792887_- | ncRNA_intronic |
CAediting_137248 | chr1_211792888_- | ncRNA_intronic |
CAediting_137249 | chr1_211792890_- | ncRNA_intronic |
CAediting_137250 | chr1_211792894_- | ncRNA_intronic |
CAediting_137251 | chr1_211792905_- | ncRNA_intronic |
CAediting_137252 | chr1_211792906_- | ncRNA_intronic |
CAediting_137253 | chr1_211792913_- | ncRNA_intronic |
CAediting_137254 | chr1_211792915_- | ncRNA_intronic |
CAediting_137255 | chr1_211792938_- | ncRNA_intronic |
CAediting_137256 | chr1_211792947_- | ncRNA_intronic |
CAediting_137257 | chr1_211792982_- | ncRNA_intronic |
CAediting_137258 | chr1_211793501_- | intronic |
CAediting_137259 | chr1_211793659_- | intronic |
CAediting_137260 | chr1_211794329_- | intronic |
CAediting_137261 | chr1_211794334_- | intronic |
CAediting_137262 | chr1_211794374_- | intronic |
CAediting_137263 | chr1_211794384_- | intronic |
CAediting_137264 | chr1_211794410_- | intronic |
CAediting_137265 | chr1_211794413_- | intronic |
CAediting_137266 | chr1_211794430_- | intronic |
CAediting_137267 | chr1_211794434_- | intronic |
CAediting_137268 | chr1_211794440_- | intronic |
CAediting_137269 | chr1_211794468_- | intronic |
CAediting_137270 | chr1_211794472_- | intronic |
CAediting_137271 | chr1_211794473_- | intronic |
CAediting_137272 | chr1_211794474_- | intronic |
CAediting_137273 | chr1_211794477_- | intronic |
CAediting_137274 | chr1_211794480_- | intronic |
CAediting_137275 | chr1_211794482_- | intronic |
CAediting_137276 | chr1_211794488_- | intronic |
CAediting_137277 | chr1_211794501_- | intronic |
CAediting_137278 | chr1_211794502_- | intronic |
CAediting_137279 | chr1_211794555_- | intronic |
CAediting_137280 | chr1_211794564_- | intronic |
CAediting_137281 | chr1_211794595_- | intronic |
CAediting_137282 | chr1_211795532_- | intronic |
CAediting_137283 | chr1_211795640_- | intronic |
CAediting_137284 | chr1_211797011_- | intronic |
CAediting_137285 | chr1_211797012_- | intronic |
CAediting_137286 | chr1_211797026_- | intronic |
CAediting_137287 | chr1_211797038_- | intronic |
CAediting_137288 | chr1_211797088_- | intronic |
CAediting_137289 | chr1_211797091_- | intronic |
CAediting_137290 | chr1_211797093_- | intronic |
CAediting_137291 | chr1_211797126_- | intronic |
CAediting_137292 | chr1_211797173_- | intronic |
CAediting_137293 | chr1_211797174_- | intronic |
CAediting_137294 | chr1_211797180_- | intronic |
CAediting_137295 | chr1_211797234_- | intronic |
CAediting_137296 | chr1_211797399_- | intronic |
CAediting_137297 | chr1_211798467_- | intronic |
CAediting_137298 | chr1_211798468_- | intronic |
CAediting_137299 | chr1_211798512_- | intronic |
CAediting_137300 | chr1_211798516_- | intronic |
CAediting_137301 | chr1_211798556_- | intronic |
CAediting_137302 | chr1_211798562_- | intronic |
CAediting_137303 | chr1_211798568_- | intronic |
CAediting_137304 | chr1_211798572_- | intronic |
CAediting_137305 | chr1_211798598_- | intronic |
CAediting_137306 | chr1_211798601_- | intronic |
CAediting_137307 | chr1_211798623_- | intronic |
CAediting_137308 | chr1_211798631_- | intronic |
CAediting_137309 | chr1_211798650_- | intronic |
CAediting_137310 | chr1_211800073_- | intronic |
CAediting_137311 | chr1_211800132_- | intronic |
CAediting_137312 | chr1_211800137_- | intronic |
CAediting_137313 | chr1_211800156_- | intronic |
CAediting_137314 | chr1_211800167_- | intronic |
CAediting_137315 | chr1_211800173_- | intronic |
CAediting_137316 | chr1_211800179_- | intronic |
CAediting_137317 | chr1_211800202_- | intronic |
CAediting_137318 | chr1_211800230_- | intronic |
CAediting_137319 | chr1_211800235_- | intronic |
CAediting_137320 | chr1_211800240_- | intronic |
CAediting_137321 | chr1_211800255_- | intronic |
CAediting_137322 | chr1_211800264_- | intronic |
CAediting_137323 | chr1_211800288_- | intronic |
CAediting_137324 | chr1_211800293_- | intronic |
CAediting_137325 | chr1_211800294_- | intronic |
CAediting_137326 | chr1_211800300_- | intronic |
CAediting_137327 | chr1_211800302_- | intronic |
CAediting_137328 | chr1_211800316_- | intronic |
CAediting_137329 | chr1_211800326_- | intronic |
CAediting_137330 | chr1_211801458_- | intronic |
CAediting_137331 | chr1_211801490_- | intronic |
CAediting_137332 | chr1_211801493_- | intronic |
CAediting_137333 | chr1_211801494_- | intronic |
CAediting_137334 | chr1_211801538_- | intronic |
CAediting_137335 | chr1_211801583_- | intronic |
CAediting_137336 | chr1_211801592_- | intronic |
CAediting_137337 | chr1_211801621_- | intronic |
CAediting_137338 | chr1_211801625_- | intronic |
CAediting_137339 | chr1_211801626_- | intronic |
CAediting_137340 | chr1_211801656_- | intronic |
CAediting_137341 | chr1_211801835_- | intronic |
CAediting_137342 | chr1_211801868_- | intronic |
CAediting_137343 | chr1_211801914_- | intronic |
CAediting_137344 | chr1_211801917_- | intronic |
CAediting_137345 | chr1_211801976_- | intronic |
CAediting_137346 | chr1_211801980_- | intronic |
CAediting_137347 | chr1_211802002_- | intronic |
CAediting_137348 | chr1_211802005_- | intronic |
CAediting_137349 | chr1_211802006_- | intronic |
CAediting_137350 | chr1_211802019_- | intronic |
CAediting_137351 | chr1_211802025_- | intronic |
CAediting_137352 | chr1_211802054_- | intronic |
CAediting_137353 | chr1_211803791_- | intronic |
CAediting_137354 | chr1_211803802_- | intronic |
CAediting_137355 | chr1_211803813_- | intronic |
CAediting_137356 | chr1_211803818_- | intronic |
CAediting_137357 | chr1_211803828_- | intronic |
CAediting_137358 | chr1_211803829_- | intronic |
CAediting_137359 | chr1_211803833_- | intronic |
CAediting_137360 | chr1_211803837_- | intronic |
CAediting_137361 | chr1_211803858_- | intronic |
CAediting_137362 | chr1_211803872_- | intronic |
CAediting_137363 | chr1_211803882_- | intronic |
CAediting_137364 | chr1_211803891_- | intronic |
CAediting_137365 | chr1_211803923_- | intronic |
CAediting_137366 | chr1_211803937_- | intronic |
CAediting_137367 | chr1_211803941_- | intronic |
CAediting_137368 | chr1_211803947_- | intronic |
CAediting_137369 | chr1_211803952_- | intronic |
CAediting_137370 | chr1_211803953_- | intronic |
CAediting_137371 | chr1_211803954_- | intronic |
CAediting_137372 | chr1_211803955_- | intronic |
CAediting_137373 | chr1_211803960_- | intronic |
CAediting_137374 | chr1_211803962_- | intronic |
CAediting_137375 | chr1_211803963_- | intronic |
CAediting_137376 | chr1_211803971_- | intronic |
CAediting_137377 | chr1_211803986_- | intronic |
CAediting_137378 | chr1_211804001_- | intronic |
CAediting_137379 | chr1_211804005_- | intronic |
CAediting_137380 | chr1_211804031_- | intronic |
CAediting_137381 | chr1_211804032_- | intronic |
CAediting_137382 | chr1_211804040_- | intronic |
CAediting_137383 | chr1_211804103_- | intronic |
CAediting_137384 | chr1_211804145_- | intronic |
CAediting_137385 | chr1_211804149_- | intronic |
CAediting_137386 | chr1_211804151_- | intronic |
CAediting_137387 | chr1_211804170_- | intronic |
CAediting_137388 | chr1_211804188_- | intronic |
CAediting_137389 | chr1_211804212_- | intronic |
CAediting_137390 | chr1_211804227_- | intronic |
CAediting_137391 | chr1_211804249_- | intronic |
CAediting_137392 | chr1_211804250_- | intronic |
CAediting_137393 | chr1_211804254_- | intronic |
CAediting_137394 | chr1_211804273_- | intronic |
CAediting_137395 | chr1_211804277_- | intronic |
CAediting_137396 | chr1_211804301_- | intronic |
CAediting_137397 | chr1_211804329_- | intronic |
CAediting_137398 | chr1_211804339_- | intronic |
CAediting_137399 | chr1_211806003_- | intronic |
CAediting_137400 | chr1_211806015_- | intronic |
CAediting_137401 | chr1_211806042_- | intronic |
CAediting_137402 | chr1_211806043_- | intronic |
CAediting_137403 | chr1_211806080_- | intronic |
CAediting_137404 | chr1_211806094_- | intronic |
CAediting_137405 | chr1_211806097_- | intronic |
CAediting_137406 | chr1_211806112_- | intronic |
CAediting_137407 | chr1_211806138_- | intronic |
CAediting_137408 | chr1_211806152_- | intronic |
CAediting_137409 | chr1_211806177_- | intronic |
CAediting_137410 | chr1_211806224_- | intronic |
CAediting_137411 | chr1_211806226_- | intronic |
CAediting_137412 | chr1_211811536_- | intronic |
CAediting_137413 | chr1_211811671_- | intronic |
CAediting_137414 | chr1_211811674_- | intronic |
CAediting_137415 | chr1_211811675_- | intronic |
CAediting_137416 | chr1_211815851_- | intronic |
CAediting_137417 | chr1_211815907_- | intronic |
CAediting_137418 | chr1_211815911_- | intronic |
CAediting_137419 | chr1_211815917_- | intronic |
CAediting_137420 | chr1_211815943_- | intronic |
CAediting_137421 | chr1_211815953_- | intronic |
CAediting_137422 | chr1_211815986_- | intronic |
CAediting_137423 | chr1_211816045_- | intronic |
CAediting_137424 | chr1_211816062_- | intronic |
CAediting_137425 | chr1_211816076_- | intronic |
CAediting_137426 | chr1_211817306_- | intronic |
CAediting_137427 | chr1_211817328_- | intronic |
CAediting_137428 | chr1_211817329_- | intronic |
CAediting_137429 | chr1_211817900_- | intronic |
CAediting_137430 | chr1_211817963_- | intronic |
CAediting_137431 | chr1_211817979_- | intronic |
CAediting_137432 | chr1_211818005_- | intronic |
CAediting_137433 | chr1_211818008_- | intronic |
CAediting_137434 | chr1_211818027_- | intronic |
CAediting_137435 | chr1_211818028_- | intronic |
CAediting_137436 | chr1_211818062_- | intronic |
CAediting_137437 | chr1_211818107_- | intronic |
CAediting_137438 | chr1_211818108_- | intronic |
CAediting_137439 | chr1_211818116_- | intronic |
CAediting_137440 | chr1_211819234_- | intronic |
CAediting_137441 | chr1_211819237_- | intronic |
CAediting_137442 | chr1_211819251_- | intronic |
CAediting_137443 | chr1_211819272_- | intronic |
CAediting_137444 | chr1_211819299_- | intronic |
CAediting_137445 | chr1_211819309_- | intronic |
CAediting_137446 | chr1_211819378_- | intronic |
CAediting_137447 | chr1_211819379_- | intronic |
CAediting_137448 | chr1_211819456_- | intronic |
CAediting_137449 | chr1_211819458_- | intronic |
CAediting_137450 | chr1_211819459_- | intronic |
CAediting_137451 | chr1_211819742_- | intronic |
CAediting_137452 | chr1_211819768_- | intronic |
CAediting_137453 | chr1_211819781_- | intronic |
CAediting_137454 | chr1_211819901_- | intronic |
CAediting_137455 | chr1_211821090_- | intronic |
CAediting_137456 | chr1_211821134_- | intronic |
CAediting_137457 | chr1_211821148_- | intronic |
CAediting_137458 | chr1_211821170_- | intronic |
CAediting_137459 | chr1_211821242_- | intronic |
CAediting_137460 | chr1_211822520_- | intronic |
CAediting_137461 | chr1_211822695_- | intronic |
CAediting_137462 | chr1_211823720_- | intronic |
CAediting_137463 | chr1_211823878_- | intronic |
CAediting_137464 | chr1_211823883_- | intronic |
CAediting_137465 | chr1_211823888_- | intronic |
CAediting_137466 | chr1_211823909_- | intronic |
CAediting_137467 | chr1_211824248_- | intronic |
CAediting_137468 | chr1_211824274_- | intronic |
CAediting_137469 | chr1_211824284_- | intronic |
CAediting_137470 | chr1_211824296_- | intronic |
CAediting_137471 | chr1_211824303_- | intronic |
CAediting_137472 | chr1_211824309_- | intronic |
CAediting_137473 | chr1_211824314_- | intronic |
CAediting_137474 | chr1_211824320_- | intronic |
CAediting_137475 | chr1_211824333_- | intronic |
CAediting_137476 | chr1_211824334_- | intronic |
CAediting_137477 | chr1_211824336_- | intronic |
CAediting_137478 | chr1_211824339_- | intronic |
CAediting_137479 | chr1_211824360_- | intronic |
CAediting_137480 | chr1_211825227_- | intronic |
CAediting_137481 | chr1_211825238_- | intronic |
CAediting_137482 | chr1_211825254_- | intronic |
CAediting_137483 | chr1_211825264_- | intronic |
CAediting_137484 | chr1_211825270_- | intronic |
CAediting_137485 | chr1_211825281_- | intronic |
CAediting_137486 | chr1_211825284_- | intronic |
CAediting_137487 | chr1_211825289_- | intronic |
CAediting_137488 | chr1_211825294_- | intronic |
CAediting_137489 | chr1_211825297_- | intronic |
CAediting_137490 | chr1_211825307_- | intronic |
CAediting_137491 | chr1_211825308_- | intronic |
CAediting_137492 | chr1_211825312_- | intronic |
CAediting_137493 | chr1_211825313_- | intronic |
CAediting_137494 | chr1_211825320_- | intronic |
CAediting_137495 | chr1_211825321_- | intronic |
CAediting_137496 | chr1_211825323_- | intronic |
CAediting_137497 | chr1_211825329_- | intronic |
CAediting_137498 | chr1_211825330_- | intronic |
CAediting_137499 | chr1_211825338_- | intronic |
CAediting_137500 | chr1_211825348_- | intronic |
CAediting_137501 | chr1_211825352_- | intronic |
CAediting_137502 | chr1_211825356_- | intronic |
CAediting_137503 | chr1_211825848_- | intronic |
CAediting_137504 | chr1_211825877_- | intronic |
CAediting_137505 | chr1_211825897_- | intronic |
![]() |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_137175 | chr1_211748412_- | SINE | Alu | AluSx1 |
CAediting_137176 | chr1_211748440_- | SINE | Alu | AluSx1 |
CAediting_137177 | chr1_211748441_- | SINE | Alu | AluSx1 |
CAediting_137178 | chr1_211748455_- | SINE | Alu | AluSx1 |
CAediting_137179 | chr1_211748536_- | SINE | Alu | AluSx1 |
CAediting_137180 | chr1_211748553_- | SINE | Alu | AluSx1 |
CAediting_137181 | chr1_211748557_- | SINE | Alu | AluSx1 |
CAediting_137182 | chr1_211748573_- | SINE | Alu | AluSx1 |
CAediting_137183 | chr1_211748585_- | SINE | Alu | AluSx1 |
CAediting_137184 | chr1_211748602_- | SINE | Alu | AluSx1 |
CAediting_137185 | chr1_211748638_- | SINE | Alu | AluSx1 |
CAediting_137186 | chr1_211748671_- | SINE | Alu | AluSx1 |
CAediting_137188 | chr1_211767236_- | SINE | Alu | AluSz |
CAediting_137189 | chr1_211769898_- | LTR | ERV1 | MER41A |
CAediting_137190 | chr1_211771045_- | SINE | Alu | AluSz6 |
CAediting_137191 | chr1_211771667_- | SINE | Alu | AluSz |
CAediting_137192 | chr1_211771729_- | SINE | Alu | AluSz |
CAediting_137193 | chr1_211774202_- | SINE | Alu | AluSz |
CAediting_137194 | chr1_211774207_- | SINE | Alu | AluSz |
CAediting_137195 | chr1_211774222_- | SINE | Alu | AluSz |
CAediting_137196 | chr1_211774231_- | SINE | Alu | AluSz |
CAediting_137197 | chr1_211774232_- | SINE | Alu | AluSz |
CAediting_137198 | chr1_211774240_- | SINE | Alu | AluSz |
CAediting_137199 | chr1_211774241_- | SINE | Alu | AluSz |
CAediting_137200 | chr1_211774248_- | SINE | Alu | AluSz |
CAediting_137201 | chr1_211774250_- | SINE | Alu | AluSz |
CAediting_137202 | chr1_211774277_- | SINE | Alu | AluSz |
CAediting_137203 | chr1_211774281_- | SINE | Alu | AluSz |
CAediting_137204 | chr1_211774285_- | SINE | Alu | AluSz |
CAediting_137205 | chr1_211774286_- | SINE | Alu | AluSz |
CAediting_137206 | chr1_211774290_- | SINE | Alu | AluSz |
CAediting_137207 | chr1_211774292_- | SINE | Alu | AluSz |
CAediting_137208 | chr1_211774293_- | SINE | Alu | AluSz |
CAediting_137209 | chr1_211774294_- | SINE | Alu | AluSz |
CAediting_137210 | chr1_211774295_- | SINE | Alu | AluSz |
CAediting_137211 | chr1_211774296_- | SINE | Alu | AluSz |
CAediting_137212 | chr1_211774299_- | SINE | Alu | AluSz |
CAediting_137213 | chr1_211774310_- | SINE | Alu | AluSz |
CAediting_137214 | chr1_211774330_- | SINE | Alu | AluSz |
CAediting_137215 | chr1_211774335_- | SINE | Alu | AluSz |
CAediting_137216 | chr1_211774336_- | SINE | Alu | AluSz |
CAediting_137217 | chr1_211774358_- | SINE | Alu | AluSz |
CAediting_137218 | chr1_211774372_- | SINE | Alu | AluSz |
CAediting_137219 | chr1_211774383_- | SINE | Alu | AluSz |
CAediting_137220 | chr1_211774388_- | SINE | Alu | AluSz |
CAediting_137221 | chr1_211774389_- | SINE | Alu | AluSz |
CAediting_137222 | chr1_211774405_- | SINE | Alu | AluSz |
CAediting_137223 | chr1_211774407_- | SINE | Alu | AluSz |
CAediting_137224 | chr1_211775766_- | SINE | Alu | AluSp |
CAediting_137225 | chr1_211777831_- | LTR | ERV1 | MER41A |
CAediting_137226 | chr1_211777890_- | LTR | ERV1 | MER41A |
CAediting_137227 | chr1_211778519_- | LTR | ERV1 | MER41A |
CAediting_137228 | chr1_211784447_- | SINE | Alu | AluJb |
CAediting_137229 | chr1_211784932_- | SINE | Alu | AluY |
CAediting_137230 | chr1_211784942_- | SINE | Alu | AluY |
CAediting_137231 | chr1_211784968_- | SINE | Alu | AluY |
CAediting_137232 | chr1_211785763_- | SINE | Alu | AluSz |
CAediting_137233 | chr1_211785784_- | SINE | Alu | AluSz |
CAediting_137234 | chr1_211785785_- | SINE | Alu | AluSz |
CAediting_137235 | chr1_211785786_- | SINE | Alu | AluSz |
CAediting_137236 | chr1_211785789_- | SINE | Alu | AluSz |
CAediting_137237 | chr1_211791496_- | SINE | Alu | AluSz6 |
CAediting_137238 | chr1_211791700_- | SINE | Alu | AluSz6 |
CAediting_137239 | chr1_211792794_- | SINE | Alu | AluSc |
CAediting_137240 | chr1_211792808_- | SINE | Alu | AluSc |
CAediting_137241 | chr1_211792809_- | SINE | Alu | AluSc |
CAediting_137242 | chr1_211792822_- | SINE | Alu | AluSc |
CAediting_137243 | chr1_211792840_- | SINE | Alu | AluSc |
CAediting_137244 | chr1_211792876_- | SINE | Alu | AluSc |
CAediting_137245 | chr1_211792883_- | SINE | Alu | AluSc |
CAediting_137246 | chr1_211792885_- | SINE | Alu | AluSc |
CAediting_137247 | chr1_211792887_- | SINE | Alu | AluSc |
CAediting_137248 | chr1_211792888_- | SINE | Alu | AluSc |
CAediting_137249 | chr1_211792890_- | SINE | Alu | AluSc |
CAediting_137250 | chr1_211792894_- | SINE | Alu | AluSc |
CAediting_137251 | chr1_211792905_- | SINE | Alu | AluSc |
CAediting_137252 | chr1_211792906_- | SINE | Alu | AluSc |
CAediting_137253 | chr1_211792913_- | SINE | Alu | AluSc |
CAediting_137254 | chr1_211792915_- | SINE | Alu | AluSc |
CAediting_137255 | chr1_211792938_- | SINE | Alu | AluSc |
CAediting_137256 | chr1_211792947_- | SINE | Alu | AluSc |
CAediting_137257 | chr1_211792982_- | SINE | Alu | AluSc |
CAediting_137258 | chr1_211793501_- | SINE | Alu | AluSz |
CAediting_137259 | chr1_211793659_- | SINE | Alu | AluSz |
CAediting_137260 | chr1_211794329_- | SINE | Alu | AluJb |
CAediting_137261 | chr1_211794334_- | SINE | Alu | AluJb |
CAediting_137262 | chr1_211794374_- | SINE | Alu | AluJb |
CAediting_137263 | chr1_211794384_- | SINE | Alu | AluJb |
CAediting_137264 | chr1_211794410_- | SINE | Alu | AluJb |
CAediting_137265 | chr1_211794413_- | SINE | Alu | AluJb |
CAediting_137266 | chr1_211794430_- | SINE | Alu | AluJb |
CAediting_137267 | chr1_211794434_- | SINE | Alu | AluJb |
CAediting_137268 | chr1_211794440_- | SINE | Alu | AluJb |
CAediting_137269 | chr1_211794468_- | SINE | Alu | AluJb |
CAediting_137270 | chr1_211794472_- | SINE | Alu | AluJb |
CAediting_137271 | chr1_211794473_- | SINE | Alu | AluJb |
CAediting_137272 | chr1_211794474_- | SINE | Alu | AluJb |
CAediting_137273 | chr1_211794477_- | SINE | Alu | AluJb |
CAediting_137274 | chr1_211794480_- | SINE | Alu | AluJb |
CAediting_137275 | chr1_211794482_- | SINE | Alu | AluJb |
CAediting_137276 | chr1_211794488_- | SINE | Alu | AluJb |
CAediting_137277 | chr1_211794501_- | SINE | Alu | AluJb |
CAediting_137278 | chr1_211794502_- | SINE | Alu | AluJb |
CAediting_137279 | chr1_211794555_- | SINE | Alu | AluJb |
CAediting_137280 | chr1_211794564_- | SINE | Alu | AluJb |
CAediting_137281 | chr1_211794595_- | SINE | Alu | AluJb |
CAediting_137282 | chr1_211795532_- | SINE | Alu | AluSp |
CAediting_137283 | chr1_211795640_- | SINE | Alu | AluSp |
CAediting_137284 | chr1_211797011_- | SINE | Alu | AluSz |
CAediting_137285 | chr1_211797012_- | SINE | Alu | AluSz |
CAediting_137286 | chr1_211797026_- | SINE | Alu | AluSz |
CAediting_137287 | chr1_211797038_- | SINE | Alu | AluSz |
CAediting_137288 | chr1_211797088_- | SINE | Alu | AluSz |
CAediting_137289 | chr1_211797091_- | SINE | Alu | AluSz |
CAediting_137290 | chr1_211797093_- | SINE | Alu | AluSz |
CAediting_137291 | chr1_211797126_- | SINE | Alu | AluSz |
CAediting_137292 | chr1_211797173_- | SINE | Alu | AluSz |
CAediting_137293 | chr1_211797174_- | SINE | Alu | AluSz |
CAediting_137294 | chr1_211797180_- | SINE | Alu | AluSz |
CAediting_137295 | chr1_211797234_- | SINE | Alu | AluSz |
CAediting_137296 | chr1_211797399_- | SINE | Alu | AluJo |
CAediting_137297 | chr1_211798467_- | SINE | Alu | AluJr4 |
CAediting_137298 | chr1_211798468_- | SINE | Alu | AluJr4 |
CAediting_137299 | chr1_211798512_- | SINE | Alu | AluJr4 |
CAediting_137300 | chr1_211798516_- | SINE | Alu | AluJr4 |
CAediting_137301 | chr1_211798556_- | SINE | Alu | AluJr4 |
CAediting_137302 | chr1_211798562_- | SINE | Alu | AluJr4 |
CAediting_137303 | chr1_211798568_- | SINE | Alu | AluJr4 |
CAediting_137304 | chr1_211798572_- | SINE | Alu | AluJr4 |
CAediting_137305 | chr1_211798598_- | SINE | Alu | AluJr4 |
CAediting_137306 | chr1_211798601_- | SINE | Alu | AluJr4 |
CAediting_137307 | chr1_211798623_- | SINE | Alu | AluJr4 |
CAediting_137308 | chr1_211798631_- | SINE | Alu | AluJr4 |
CAediting_137309 | chr1_211798650_- | SINE | Alu | AluJr4 |
CAediting_137310 | chr1_211800073_- | SINE | Alu | AluSx3 |
CAediting_137311 | chr1_211800132_- | SINE | Alu | AluSx3 |
CAediting_137312 | chr1_211800137_- | SINE | Alu | AluSx3 |
CAediting_137313 | chr1_211800156_- | SINE | Alu | AluSx3 |
CAediting_137314 | chr1_211800167_- | SINE | Alu | AluSx3 |
CAediting_137315 | chr1_211800173_- | SINE | Alu | AluSx3 |
CAediting_137316 | chr1_211800179_- | SINE | Alu | AluSx3 |
CAediting_137317 | chr1_211800202_- | SINE | Alu | AluSx3 |
CAediting_137318 | chr1_211800230_- | SINE | Alu | AluSx3 |
CAediting_137319 | chr1_211800235_- | SINE | Alu | AluSx3 |
CAediting_137320 | chr1_211800240_- | SINE | Alu | AluSx3 |
CAediting_137321 | chr1_211800255_- | SINE | Alu | AluSx3 |
CAediting_137322 | chr1_211800264_- | SINE | Alu | AluSx3 |
CAediting_137323 | chr1_211800288_- | SINE | Alu | AluSx3 |
CAediting_137324 | chr1_211800293_- | SINE | Alu | AluSx3 |
CAediting_137325 | chr1_211800294_- | SINE | Alu | AluSx3 |
CAediting_137326 | chr1_211800300_- | SINE | Alu | AluSx3 |
CAediting_137327 | chr1_211800302_- | SINE | Alu | AluSx3 |
CAediting_137328 | chr1_211800316_- | SINE | Alu | AluSx3 |
CAediting_137329 | chr1_211800326_- | LINE | L2 | L2 |
CAediting_137330 | chr1_211801458_- | SINE | Alu | AluJr4 |
CAediting_137331 | chr1_211801490_- | SINE | Alu | AluJr4 |
CAediting_137332 | chr1_211801493_- | SINE | Alu | AluJr4 |
CAediting_137333 | chr1_211801494_- | SINE | Alu | AluJr4 |
CAediting_137334 | chr1_211801538_- | SINE | Alu | AluJr4 |
CAediting_137335 | chr1_211801583_- | SINE | Alu | AluJr4 |
CAediting_137336 | chr1_211801592_- | SINE | Alu | AluJr4 |
CAediting_137337 | chr1_211801621_- | SINE | Alu | AluJr4 |
CAediting_137338 | chr1_211801625_- | SINE | Alu | AluJr4 |
CAediting_137339 | chr1_211801626_- | SINE | Alu | AluJr4 |
CAediting_137340 | chr1_211801656_- | SINE | Alu | AluJr4 |
CAediting_137341 | chr1_211801835_- | SINE | Alu | AluSz |
CAediting_137342 | chr1_211801868_- | SINE | Alu | AluSz |
CAediting_137343 | chr1_211801914_- | SINE | Alu | AluSz |
CAediting_137344 | chr1_211801917_- | SINE | Alu | AluSz |
CAediting_137345 | chr1_211801976_- | SINE | Alu | AluSz |
CAediting_137346 | chr1_211801980_- | SINE | Alu | AluSz |
CAediting_137347 | chr1_211802002_- | SINE | Alu | AluSz |
CAediting_137348 | chr1_211802005_- | SINE | Alu | AluSz |
CAediting_137349 | chr1_211802006_- | SINE | Alu | AluSz |
CAediting_137350 | chr1_211802019_- | SINE | Alu | AluSz |
CAediting_137351 | chr1_211802025_- | SINE | Alu | AluSz |
CAediting_137352 | chr1_211802054_- | SINE | Alu | AluSz |
CAediting_137353 | chr1_211803791_- | SINE | Alu | AluSx |
CAediting_137354 | chr1_211803802_- | SINE | Alu | AluSx |
CAediting_137355 | chr1_211803813_- | SINE | Alu | AluSx |
CAediting_137356 | chr1_211803818_- | SINE | Alu | AluSx |
CAediting_137357 | chr1_211803828_- | SINE | Alu | AluSx |
CAediting_137358 | chr1_211803829_- | SINE | Alu | AluSx |
CAediting_137359 | chr1_211803833_- | SINE | Alu | AluSx |
CAediting_137360 | chr1_211803837_- | SINE | Alu | AluSx |
CAediting_137361 | chr1_211803858_- | SINE | Alu | AluSx |
CAediting_137362 | chr1_211803872_- | SINE | Alu | AluSx |
CAediting_137363 | chr1_211803882_- | SINE | Alu | AluSx |
CAediting_137364 | chr1_211803891_- | SINE | Alu | AluSx |
CAediting_137365 | chr1_211803923_- | SINE | Alu | AluSx |
CAediting_137366 | chr1_211803937_- | SINE | Alu | AluSx |
CAediting_137367 | chr1_211803941_- | SINE | Alu | AluSx |
CAediting_137368 | chr1_211803947_- | SINE | Alu | AluSx |
CAediting_137369 | chr1_211803952_- | SINE | Alu | AluSx |
CAediting_137370 | chr1_211803953_- | SINE | Alu | AluSx |
CAediting_137371 | chr1_211803954_- | SINE | Alu | AluSx |
CAediting_137372 | chr1_211803955_- | SINE | Alu | AluSx |
CAediting_137373 | chr1_211803960_- | SINE | Alu | AluSx |
CAediting_137374 | chr1_211803962_- | SINE | Alu | AluSx |
CAediting_137375 | chr1_211803963_- | SINE | Alu | AluSx |
CAediting_137376 | chr1_211803971_- | SINE | Alu | AluSx |
CAediting_137377 | chr1_211803986_- | SINE | Alu | AluSx |
CAediting_137378 | chr1_211804001_- | SINE | Alu | AluSx |
CAediting_137379 | chr1_211804005_- | SINE | Alu | AluSx |
CAediting_137380 | chr1_211804031_- | SINE | Alu | AluSx |
CAediting_137381 | chr1_211804032_- | SINE | Alu | AluSx |
CAediting_137382 | chr1_211804040_- | SINE | Alu | AluSx |
CAediting_137383 | chr1_211804103_- | SINE | Alu | AluJo |
CAediting_137384 | chr1_211804145_- | SINE | Alu | AluJo |
CAediting_137385 | chr1_211804149_- | SINE | Alu | AluJo |
CAediting_137386 | chr1_211804151_- | SINE | Alu | AluJo |
CAediting_137387 | chr1_211804170_- | SINE | Alu | AluJo |
CAediting_137388 | chr1_211804188_- | SINE | Alu | AluJo |
CAediting_137389 | chr1_211804212_- | SINE | Alu | AluJo |
CAediting_137390 | chr1_211804227_- | SINE | Alu | AluJo |
CAediting_137391 | chr1_211804249_- | SINE | Alu | AluJo |
CAediting_137392 | chr1_211804250_- | SINE | Alu | AluJo |
CAediting_137393 | chr1_211804254_- | SINE | Alu | AluJo |
CAediting_137394 | chr1_211804273_- | SINE | Alu | AluJo |
CAediting_137395 | chr1_211804277_- | SINE | Alu | AluJo |
CAediting_137396 | chr1_211804301_- | SINE | Alu | AluJo |
CAediting_137397 | chr1_211804329_- | SINE | Alu | AluJo |
CAediting_137398 | chr1_211804339_- | SINE | Alu | AluJo |
CAediting_137399 | chr1_211806003_- | SINE | Alu | AluSz6 |
CAediting_137400 | chr1_211806015_- | SINE | Alu | AluSz6 |
CAediting_137401 | chr1_211806042_- | SINE | Alu | AluSz6 |
CAediting_137402 | chr1_211806043_- | SINE | Alu | AluSz6 |
CAediting_137403 | chr1_211806080_- | SINE | Alu | AluSz6 |
CAediting_137404 | chr1_211806094_- | SINE | Alu | AluSz6 |
CAediting_137405 | chr1_211806097_- | SINE | Alu | AluSz6 |
CAediting_137406 | chr1_211806112_- | SINE | Alu | AluSz6 |
CAediting_137407 | chr1_211806138_- | SINE | Alu | AluSz6 |
CAediting_137408 | chr1_211806152_- | SINE | Alu | AluSz6 |
CAediting_137409 | chr1_211806177_- | SINE | Alu | AluSz6 |
CAediting_137410 | chr1_211806224_- | SINE | Alu | AluSz6 |
CAediting_137411 | chr1_211806226_- | SINE | Alu | AluSz6 |
CAediting_137412 | chr1_211811536_- | SINE | Alu | AluSz6 |
CAediting_137413 | chr1_211811671_- | SINE | Alu | AluSz6 |
CAediting_137414 | chr1_211811674_- | SINE | Alu | AluSz6 |
CAediting_137415 | chr1_211811675_- | SINE | Alu | AluSz6 |
CAediting_137416 | chr1_211815851_- | SINE | Alu | AluY |
CAediting_137417 | chr1_211815907_- | SINE | Alu | AluY |
CAediting_137418 | chr1_211815911_- | SINE | Alu | AluY |
CAediting_137419 | chr1_211815917_- | SINE | Alu | AluY |
CAediting_137420 | chr1_211815943_- | SINE | Alu | AluY |
CAediting_137421 | chr1_211815953_- | SINE | Alu | AluY |
CAediting_137422 | chr1_211815986_- | SINE | Alu | AluY |
CAediting_137423 | chr1_211816045_- | SINE | Alu | AluY |
CAediting_137424 | chr1_211816062_- | SINE | Alu | AluY |
CAediting_137425 | chr1_211816076_- | SINE | Alu | AluY |
CAediting_137426 | chr1_211817306_- | SINE | Alu | AluSx1 |
CAediting_137427 | chr1_211817328_- | SINE | Alu | AluSx1 |
CAediting_137428 | chr1_211817329_- | SINE | Alu | AluSx1 |
CAediting_137429 | chr1_211817900_- | SINE | Alu | AluSz |
CAediting_137430 | chr1_211817963_- | SINE | Alu | AluSz |
CAediting_137431 | chr1_211817979_- | SINE | Alu | AluSz |
CAediting_137432 | chr1_211818005_- | SINE | Alu | AluSz |
CAediting_137433 | chr1_211818008_- | SINE | Alu | AluSz |
CAediting_137434 | chr1_211818027_- | SINE | Alu | AluSz |
CAediting_137435 | chr1_211818028_- | SINE | Alu | AluSz |
CAediting_137436 | chr1_211818062_- | SINE | Alu | AluSz |
CAediting_137437 | chr1_211818107_- | SINE | Alu | AluSz |
CAediting_137438 | chr1_211818108_- | SINE | Alu | AluSz |
CAediting_137439 | chr1_211818116_- | SINE | Alu | AluSz |
CAediting_137440 | chr1_211819234_- | SINE | Alu | AluJr |
CAediting_137441 | chr1_211819237_- | SINE | Alu | AluJr |
CAediting_137442 | chr1_211819251_- | SINE | Alu | AluJr |
CAediting_137443 | chr1_211819272_- | SINE | Alu | AluJr |
CAediting_137444 | chr1_211819299_- | SINE | Alu | AluJr |
CAediting_137445 | chr1_211819309_- | SINE | Alu | AluJr |
CAediting_137446 | chr1_211819378_- | SINE | Alu | AluJr |
CAediting_137447 | chr1_211819379_- | SINE | Alu | AluJr |
CAediting_137448 | chr1_211819456_- | SINE | Alu | AluJr |
CAediting_137449 | chr1_211819458_- | SINE | Alu | AluJr |
CAediting_137450 | chr1_211819459_- | SINE | Alu | AluJr |
CAediting_137451 | chr1_211819742_- | SINE | Alu | AluSx1 |
CAediting_137452 | chr1_211819768_- | SINE | Alu | AluSx1 |
CAediting_137453 | chr1_211819781_- | SINE | Alu | AluSx1 |
CAediting_137454 | chr1_211819901_- | SINE | Alu | AluSx1 |
CAediting_137455 | chr1_211821090_- | SINE | Alu | AluSx |
CAediting_137456 | chr1_211821134_- | SINE | Alu | AluSx |
CAediting_137457 | chr1_211821148_- | SINE | Alu | AluSx |
CAediting_137458 | chr1_211821170_- | SINE | Alu | AluSx |
CAediting_137459 | chr1_211821242_- | SINE | Alu | AluSx |
CAediting_137460 | chr1_211822520_- | SINE | Alu | AluSz |
CAediting_137461 | chr1_211822695_- | SINE | Alu | AluSz |
CAediting_137462 | chr1_211823720_- | SINE | Alu | AluJr |
CAediting_137463 | chr1_211823878_- | SINE | Alu | AluJr |
CAediting_137464 | chr1_211823883_- | SINE | Alu | AluJr |
CAediting_137465 | chr1_211823888_- | SINE | Alu | AluJr |
CAediting_137466 | chr1_211823909_- | SINE | Alu | AluJr |
CAediting_137467 | chr1_211824248_- | SINE | Alu | AluSx1 |
CAediting_137468 | chr1_211824274_- | SINE | Alu | AluSx1 |
CAediting_137469 | chr1_211824284_- | SINE | Alu | AluSx1 |
CAediting_137470 | chr1_211824296_- | SINE | Alu | AluSx1 |
CAediting_137471 | chr1_211824303_- | SINE | Alu | AluSx1 |
CAediting_137472 | chr1_211824309_- | SINE | Alu | AluSx1 |
CAediting_137473 | chr1_211824314_- | SINE | Alu | AluSx1 |
CAediting_137474 | chr1_211824320_- | SINE | Alu | AluSx1 |
CAediting_137475 | chr1_211824333_- | SINE | Alu | AluSx1 |
CAediting_137476 | chr1_211824334_- | SINE | Alu | AluSx1 |
CAediting_137477 | chr1_211824336_- | SINE | Alu | AluSx1 |
CAediting_137478 | chr1_211824339_- | SINE | Alu | AluSx1 |
CAediting_137479 | chr1_211824360_- | SINE | Alu | AluSx1 |
CAediting_137480 | chr1_211825227_- | SINE | Alu | AluJr4 |
CAediting_137481 | chr1_211825238_- | SINE | Alu | AluJr4 |
CAediting_137482 | chr1_211825254_- | SINE | Alu | AluJr4 |
CAediting_137483 | chr1_211825264_- | SINE | Alu | AluJr4 |
CAediting_137484 | chr1_211825270_- | SINE | Alu | AluJr4 |
CAediting_137485 | chr1_211825281_- | SINE | Alu | AluJr4 |
CAediting_137486 | chr1_211825284_- | SINE | Alu | AluJr4 |
CAediting_137487 | chr1_211825289_- | SINE | Alu | AluJr4 |
CAediting_137488 | chr1_211825294_- | SINE | Alu | AluJr4 |
CAediting_137489 | chr1_211825297_- | SINE | Alu | AluJr4 |
CAediting_137490 | chr1_211825307_- | SINE | Alu | AluJr4 |
CAediting_137491 | chr1_211825308_- | SINE | Alu | AluJr4 |
CAediting_137492 | chr1_211825312_- | SINE | Alu | AluJr4 |
CAediting_137493 | chr1_211825313_- | SINE | Alu | AluJr4 |
CAediting_137494 | chr1_211825320_- | SINE | Alu | AluJr4 |
CAediting_137495 | chr1_211825321_- | SINE | Alu | AluJr4 |
CAediting_137496 | chr1_211825323_- | SINE | Alu | AluJr4 |
CAediting_137497 | chr1_211825329_- | SINE | Alu | AluJr4 |
CAediting_137498 | chr1_211825330_- | SINE | Alu | AluJr4 |
CAediting_137499 | chr1_211825338_- | SINE | Alu | AluJr4 |
CAediting_137500 | chr1_211825348_- | SINE | Alu | AluJr4 |
CAediting_137501 | chr1_211825352_- | SINE | Alu | AluJr4 |
CAediting_137502 | chr1_211825356_- | SINE | Alu | AluJr4 |
CAediting_137503 | chr1_211825848_- | SINE | Alu | AluSg |
CAediting_137504 | chr1_211825877_- | SINE | Alu | AluSg |
CAediting_137505 | chr1_211825897_- | SINE | Alu | AluSg |
Top |
RNA A-to-I editing events in the alternative splicing sites for LPGAT1 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_137300 | chr1_211798516_- | 211798514:211798536 | 3SS | 1+0i | AATTTTAAATTTTTTTATAGAGA | 5.8 | AATTTTAAATTTTTTTATAGGGA | 7.41 |
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Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for LPGAT1 |
![]() * The grey color means N/A. |
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![]() * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for LPGAT1 |
![]() * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for LPGAT1 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_137182 | chr1_211748573_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4691-3p | 211748569 | 211748575 | 7mer-m8 | 211748568 | 211748595 | 150.00 | -26.36 |
CAediting_137178 | chr1_211748455_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-7112-5p | 211748455 | 211748461 | 7mer-m8 | 211748454 | 211748475 | 148.00 | -24.22 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548ae-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748552 | 146.00 | -10.65 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548ae-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748552 | 146.00 | -10.65 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548ah-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748549 | 144.00 | -11.31 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548aj-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748552 | 146.00 | -8.54 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548aj-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748552 | 146.00 | -8.54 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548am-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748549 | 144.00 | -11.04 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548aq-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748553 | 146.00 | -12.21 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548j-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748550 | 141.00 | -10.65 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548x-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748551 | 146.00 | -8.54 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548x-3p | 211748531 | 211748537 | 7mer-m8 | 211748530 | 211748551 | 146.00 | -8.54 |
CAediting_137179 | chr1_211748536_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-7844-5p | 211748533 | 211748539 | 7mer-m8 | 211748532 | 211748556 | 158.00 | -16.74 |
CAediting_137181 | chr1_211748557_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6720-3p | 211748556 | 211748562 | 7mer-m8 | 211748555 | 211748576 | 152.00 | -20.67 |
CAediting_137181 | chr1_211748557_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-9899 | 211748553 | 211748560 | 8mer-1a | 211748553 | 211748575 | 154.00 | -25.46 |
CAediting_137185 | chr1_211748638_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-10525-3p | 211748636 | 211748642 | 7mer-m8 | 211748635 | 211748656 | 155.00 | -16.92 |
CAediting_137185 | chr1_211748638_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-3672 | 211748633 | 211748639 | 7mer-m8 | 211748632 | 211748653 | 149.00 | -14.33 |
CAediting_137185 | chr1_211748638_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6864-3p | 211748633 | 211748639 | 7mer-m8 | 211748632 | 211748651 | 145.00 | -14.78 |
CAediting_137186 | chr1_211748671_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-451b | 211748669 | 211748675 | 7mer-m8 | 211748668 | 211748689 | 140.00 | -9.32 |
CAediting_137186 | chr1_211748671_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4696 | 211748670 | 211748676 | 7mer-m8 | 211748669 | 211748690 | 140.00 | -15.99 |
CAediting_137186 | chr1_211748671_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6501-3p | 211748666 | 211748672 | 7mer-m8 | 211748665 | 211748690 | 151.00 | -18.57 |
CAediting_137175 | chr1_211748412_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-10394-3p | 211748407 | 211748413 | 7mer-m8 | 211748406 | 211748428 | 144.00 | -25.00 |
CAediting_137175 | chr1_211748412_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-3178 | 211748407 | 211748413 | 7mer-m8 | 211748406 | 211748422 | 145.00 | -24.78 |
CAediting_137177 | chr1_211748441_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-3059-3p | 211748439 | 211748445 | 7mer-m8 | 211748438 | 211748458 | 157.00 | -22.13 |
CAediting_137177 | chr1_211748441_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-5684 | 211748438 | 211748444 | 7mer-m8 | 211748437 | 211748459 | 141.00 | -15.29 |
CAediting_137187 | chr1_211749868_- | ENSG00000123684.11 | ENST00000366996 | hsa-miR-532-3p | 211749864 | 211749870 | 7mer-m8 | 211749863 | 211749884 | 140.00 | -16.15 |
CAediting_137187 | chr1_211749868_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-532-3p | 211749864 | 211749870 | 7mer-m8 | 211749863 | 211749884 | 140.00 | -16.15 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_137183 | chr1_211748585_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4478 | 211748581 | 211748587 | 7mer-m8 | 211748580 | 211748595 | 149 | -25.05 |
CAediting_137183 | chr1_211748585_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4649-3p | 211748584 | 211748590 | 7mer-m8 | 211748583 | 211748603 | 140 | -14.11 |
CAediting_137181 | chr1_211748557_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-550a-3-5p | 211748556 | 211748562 | 7mer-m8 | 211748555 | 211748574 | 143 | -16.67 |
CAediting_137181 | chr1_211748557_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-550a-5p | 211748556 | 211748562 | 7mer-m8 | 211748555 | 211748577 | 143 | -18.93 |
CAediting_137181 | chr1_211748557_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-550a-5p | 211748556 | 211748562 | 7mer-m8 | 211748555 | 211748577 | 143 | -18.93 |
CAediting_137182 | chr1_211748573_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-5690 | 211748569 | 211748575 | 7mer-m8 | 211748568 | 211748588 | 145 | -16.75 |
CAediting_137178 | chr1_211748455_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6134 | 211748451 | 211748457 | 7mer-m8 | 211748450 | 211748468 | 150 | -18.96 |
CAediting_137178 | chr1_211748455_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-654-5p | 211748453 | 211748459 | 7mer-m8 | 211748452 | 211748472 | 149 | -21.62 |
CAediting_137180 | chr1_211748553_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6741-5p | 211748553 | 211748559 | 7mer-m8 | 211748552 | 211748573 | 154 | -27.31 |
CAediting_137181 | chr1_211748557_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6741-5p | 211748553 | 211748559 | 7mer-m8 | 211748552 | 211748573 | 154 | -27.31 |
CAediting_137180 | chr1_211748553_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6748-5p | 211748552 | 211748558 | 7mer-m8 | 211748551 | 211748574 | 142 | -19.53 |
CAediting_137181 | chr1_211748557_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6748-5p | 211748552 | 211748558 | 7mer-m8 | 211748551 | 211748574 | 142 | -19.53 |
CAediting_137180 | chr1_211748553_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6769a-5p | 211748550 | 211748557 | 8mer-1a | 211748550 | 211748572 | 141 | -21.54 |
CAediting_137180 | chr1_211748553_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6769b-5p | 211748550 | 211748557 | 8mer-1a | 211748550 | 211748572 | 145 | -22.59 |
CAediting_137183 | chr1_211748585_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-7160-5p | 211748583 | 211748589 | 7mer-m8 | 211748582 | 211748602 | 146 | -20.4 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229414 | chr17_67471546_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548aa | 211746996 | 211747002 | 7mer-m8 | 211746995 | 211747025 | 147 | -15.54 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548aa | 211746662 | 211746668 | 7mer-m8 | 211746661 | 211746687 | 153 | -12.56 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-548aa | 211745480 | 211745487 | 8mer-1a | 211745480 | 211745507 | 156 | -11.02 |
CAediting_228905 | chr2_188297554_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-561-3p | 211749355 | 211749362 | 8mer-1a | 211749355 | 211749374 | 145 | -6.62 |
CAediting_442554 | chr5_154685830_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-1303 | 211748287 | 211748294 | 8mer-1a | 211748287 | 211748309 | 159 | -23.77 |
CAediting_580943 | chr7_100356700_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-6840-3p | 211748607 | 211748613 | 7mer-m8 | 211748606 | 211748627 | 140 | -24.24 |
CAediting_524911 | chr7_5495852_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-589-3p | 211745890 | 211745896 | 7mer-m8 | 211745889 | 211745912 | 150 | -14.97 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_573001 | chr7_92204086_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-1285-5p | 211748262 | 211748268 | 7mer-m8 | 211748261 | 211748283 | 149 | -19.34 |
CAediting_573001 | chr7_92204086_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-1285-5p | 211743783 | 211743789 | 7mer-m8 | 211743782 | 211743802 | 141 | -14.18 |
CAediting_442554 | chr5_154685830_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-1303 | 211743958 | 211743964 | 7mer-m8 | 211743957 | 211743978 | 142 | -14.48 |
CAediting_1160181 | chr17_7017644_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-195-3p | 211749346 | 211749353 | 8mer-1a | 211749346 | 211749370 | 151 | -10.55 |
CAediting_393 | chr1_1167164_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-200b-3p | 211747183 | 211747189 | 7mer-m8 | 211747182 | 211747203 | 140 | -6.77 |
CAediting_1306323 | chr19_13836462_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-27a-3p | 211748194 | 211748200 | 7mer-m8 | 211748193 | 211748214 | 148 | -17.81 |
CAediting_1306323 | chr19_13836462_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-27a-3p | 211745443 | 211745449 | 7mer-m8 | 211745442 | 211745461 | 148 | -12.65 |
CAediting_1306323 | chr19_13836462_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-27a-3p | 211744499 | 211744505 | 7mer-m8 | 211744498 | 211744517 | 145 | -11.77 |
CAediting_604450 | chr7_133034877_- | ENSG00000123684.11 | ENST00000366997 | hsa-miR-3654 | 211746884 | 211746890 | 7mer-m8 | 211746883 | 211746902 | 152 | -23.26 |
CAediting_688080 | chr9_63819626_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4477b | 211746640 | 211746646 | 7mer-m8 | 211746639 | 211746661 | 153 | -11.81 |
CAediting_688081 | chr9_63819627_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4477b | 211746640 | 211746646 | 7mer-m8 | 211746639 | 211746661 | 153 | -11.81 |
CAediting_688080 | chr9_63819626_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4477b | 211746144 | 211746151 | 8mer-1a | 211746144 | 211746161 | 154 | -16.29 |
CAediting_688081 | chr9_63819627_+ | ENSG00000123684.11 | ENST00000366997 | hsa-miR-4477b | 211746144 | 211746151 | 8mer-1a | 211746144 | 211746161 | 154 | -16.29 |
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The effects of the RNA editing to the stability of the RNA structures for LPGAT1 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000366997.7 | protein_coding | ![]() | ![]() |
ENST00000366996.1 | protein_coding | ![]() | ![]() |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_137175 | ENST00000366997.7 | chr1_211748412_- | -2120.50 | -2121.20 | -2143.20 |
CAediting_137176 | ENST00000366997.7 | chr1_211748440_- | -2121.70 | -2121.20 | -2143.20 |
CAediting_137177 | ENST00000366997.7 | chr1_211748441_- | -2123.00 | -2121.20 | -2143.20 |
CAediting_137178 | ENST00000366997.7 | chr1_211748455_- | -2125.30 | -2121.20 | -2143.20 |
CAediting_137179 | ENST00000366997.7 | chr1_211748536_- | -2121.30 | -2121.20 | -2143.20 |
CAediting_137180 | ENST00000366997.7 | chr1_211748553_- | -2122.20 | -2121.20 | -2143.20 |
CAediting_137181 | ENST00000366997.7 | chr1_211748557_- | -2120.60 | -2121.20 | -2143.20 |
CAediting_137182 | ENST00000366997.7 | chr1_211748573_- | -2123.70 | -2121.20 | -2143.20 |
CAediting_137183 | ENST00000366997.7 | chr1_211748585_- | -2124.30 | -2121.20 | -2143.20 |
CAediting_137184 | ENST00000366997.7 | chr1_211748602_- | -2124.30 | -2121.20 | -2143.20 |
CAediting_137185 | ENST00000366997.7 | chr1_211748638_- | -2121.20 | -2121.20 | -2143.20 |
CAediting_137186 | ENST00000366997.7 | chr1_211748671_- | -2126.00 | -2121.20 | -2143.20 |
CAediting_137187 | ENST00000366997.7 | chr1_211749868_- | -2120.80 | -2121.20 | -2143.20 |
CAediting_137187 | ENST00000366996.1 | chr1_211749868_- | -610.70 | -610.70 | -610.70 |
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Relation with ADAR for LPGAT1 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
STAD | CAediting_137487 | chr1_211825289_- | . | . | . | . | 0.0394915792147235 | 0.173013678381412 |
STAD | CAediting_137490 | chr1_211825307_- | 0.0112461163606883 | 0.299228017163224 | . | . | . | . |
STAD | CAediting_137492 | chr1_211825312_- | . | . | . | . | 0.0425949637062853 | 0.17744964649498 |
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Relation with cancer stages for LPGAT1 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
ESCA | clinical_stage | CAediting_137492 | chr1_211825312_- | 0.0245059642651795 | -0.500792015315127 |
STAD | pathologic_stage | CAediting_137490 | chr1_211825307_- | 0.0155467692842454 | 0.290261981908184 |
STAD | pathologic_stage | CAediting_137492 | chr1_211825312_- | 0.00426672823747567 | 0.250996348189003 |
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Relation with survival for LPGAT1 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for LPGAT1 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for LPGAT1 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
LPGAT1 | C0043094 | Weight Gain | 1 | CTD_human |