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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: FAM20B (CAeditome ID:9917)

Gene summary for FAM20B

check button Gene summary
Gene informationGene symbol

FAM20B

Gene ID

9917

Gene nameFAM20B glycosaminoglycan xylosylkinase
Synonymsgxk1
Cytomap

1q25.2

Type of geneprotein-coding
Descriptionglycosaminoglycan xylosylkinasefamily with sequence similarity 20, member Bxylose kinase
Modification date20210518
UniProtAcc

O75063

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
FAM20B

GO:0016773

Glycosaminoglycan xylosylkinase

19473117

FAM20B

GO:0005654

Glycosaminoglycan xylosylkinase

0000052

FAM20B

GO:0005794

Glycosaminoglycan xylosylkinase

0000052

FAM20B

GO:0005794

Glycosaminoglycan xylosylkinase

19473117


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RNA A-to-I events for FAM20B

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000116199.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_124258(179036010, +), CAediting_124259(179037554, +), CAediting_124260(179037761, +), CAediting_124261(179038145, +), CAediting_124262(179038153, +), CAediting_124263(179038154, +), CAediting_124264(179038184, +), CAediting_124265(179038194, +), CAediting_124266(179038208, +), CAediting_124267(179038223, +), CAediting_124268(179038250, +), CAediting_124269(179038251, +), CAediting_124270(179038290, +), CAediting_124271(179038291, +), CAediting_124272(179038331, +), CAediting_124273(179038332, +), CAediting_124274(179038340, +), CAediting_124275(179038356, +), CAediting_124276(179038361, +), CAediting_124277(179038363, +), CAediting_124278(179038401, +), CAediting_124279(179038402, +), CAediting_124280(179045723, +), CAediting_124281(179045763, +), CAediting_124282(179045765, +), CAediting_124283(179046395, +), CAediting_124284(179046396, +), CAediting_124285(179049641, +), CAediting_124286(179049670, +), CAediting_124287(179049680, +), CAediting_124288(179049682, +), CAediting_124289(179049725, +), CAediting_124290(179050850, +), CAediting_124291(179050873, +), CAediting_124292(179050897, +), CAediting_124293(179050957, +), CAediting_124294(179050960, +), CAediting_124295(179050961, +), CAediting_124296(179051423, +), CAediting_124297(179051506, +), CAediting_124298(179051678, +), CAediting_124299(179051705, +), CAediting_124300(179051747, +), CAediting_124301(179051764, +), CAediting_124302(179051788, +), CAediting_124303(179057300, +), CAediting_124304(179062529, +), CAediting_124305(179062539, +), CAediting_124306(179062556, +), CAediting_124307(179062599, +), CAediting_124308(179062605, +), CAediting_124309(179062620, +), CAediting_124310(179063082, +), CAediting_124311(179067333, +), CAediting_124312(179067833, +), CAediting_124313(179067864, +), CAediting_124314(179068015, +), CAediting_124315(179068025, +), CAediting_124316(179068031, +), CAediting_124317(179068561, +), CAediting_124318(179068699, +), CAediting_124319(179070110, +), CAediting_124320(179073337, +), CAediting_124321(179073341, +), CAediting_124322(179073347, +), CAediting_124323(179073359, +), CAediting_124324(179073366, +), CAediting_124325(179073377, +), CAediting_124326(179073380, +), CAediting_124327(179073390, +), CAediting_124328(179073395, +), CAediting_124329(179073409, +), CAediting_124330(179073416, +), CAediting_124331(179073420, +), CAediting_124332(179073433, +), CAediting_124333(179073440, +), CAediting_124334(179073445, +), CAediting_124335(179073452, +), CAediting_124336(179073455, +), CAediting_124337(179073457, +), CAediting_124338(179073477, +), CAediting_124339(179073481, +), CAediting_124340(179073488, +), CAediting_124341(179073496, +), CAediting_124342(179073505, +), CAediting_124343(179073520, +), CAediting_124344(179073532, +), CAediting_124345(179073538, +), CAediting_124346(179073552, +), CAediting_124347(179073557, +), CAediting_124348(179073562, +), CAediting_124349(179073566, +), CAediting_124350(179073575, +), CAediting_124351(179073584, +), CAediting_124352(179073585, +), CAediting_124353(179073594, +), CAediting_124354(179073597, +), CAediting_124355(179073599, +), CAediting_124356(179073603, +), CAediting_124357(179073606, +), CAediting_124358(179073610, +), CAediting_124359(179073624, +), CAediting_124360(179073631, +), CAediting_124361(179073632, +), CAediting_124362(179073770, +), CAediting_124363(179074869, +), CAediting_124364(179074927, +), CAediting_124365(179074936, +), CAediting_124366(179074941, +), CAediting_124367(179074944, +), CAediting_124368(179074951, +), CAediting_124369(179074967, +), CAediting_124370(179074970, +), CAediting_124371(179074975, +), CAediting_124372(179074980, +), CAediting_124373(179074983, +), CAediting_124374(179074994, +), CAediting_124375(179075007, +), CAediting_124376(179075016, +), CAediting_124377(179075027, +), CAediting_124378(179075031, +), CAediting_124379(179075032, +), CAediting_124380(179075033, +), CAediting_124381(179075034, +), CAediting_124382(179075038, +), CAediting_124383(179075039, +), CAediting_124384(179075040, +), CAediting_124385(179075042, +), CAediting_124386(179075045, +), CAediting_124387(179075046, +), CAediting_124388(179075053, +), CAediting_124389(179075061, +), CAediting_124390(179075088, +), CAediting_124391(179075094, +), CAediting_124392(179075104, +), CAediting_124393(179075107, +), CAediting_124394(179075112, +), CAediting_124395(179075113, +), CAediting_124396(179075120, +), CAediting_124397(179075125, +), CAediting_124398(179075126, +), CAediting_124399(179075133, +), CAediting_124400(179075137, +), CAediting_124401(179075142, +), CAediting_124402(179075144, +), CAediting_124403(179075162, +), CAediting_124404(179075174, +), CAediting_124405(179075176, +), CAediting_124406(179075180, +), CAediting_124407(179075182, +), CAediting_124408(179075194, +), CAediting_124409(179075197, +), CAediting_124410(179075198, +), CAediting_124411(179075204, +),

Top

RNA editing positional annotations for FAM20B using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_124258chr1_179036010_+intronic
CAediting_124259chr1_179037554_+intronic
CAediting_124260chr1_179037761_+intronic
CAediting_124261chr1_179038145_+intronic
CAediting_124262chr1_179038153_+intronic
CAediting_124263chr1_179038154_+intronic
CAediting_124264chr1_179038184_+intronic
CAediting_124265chr1_179038194_+intronic
CAediting_124266chr1_179038208_+intronic
CAediting_124267chr1_179038223_+intronic
CAediting_124268chr1_179038250_+intronic
CAediting_124269chr1_179038251_+intronic
CAediting_124270chr1_179038290_+intronic
CAediting_124271chr1_179038291_+intronic
CAediting_124272chr1_179038331_+intronic
CAediting_124273chr1_179038332_+intronic
CAediting_124274chr1_179038340_+intronic
CAediting_124275chr1_179038356_+intronic
CAediting_124276chr1_179038361_+intronic
CAediting_124277chr1_179038363_+intronic
CAediting_124278chr1_179038401_+intronic
CAediting_124279chr1_179038402_+intronic
CAediting_124280chr1_179045723_+intronic
CAediting_124281chr1_179045763_+intronic
CAediting_124282chr1_179045765_+intronic
CAediting_124283chr1_179046395_+intronic
CAediting_124284chr1_179046396_+intronic
CAediting_124285chr1_179049641_+intronic
CAediting_124286chr1_179049670_+intronic
CAediting_124287chr1_179049680_+intronic
CAediting_124288chr1_179049682_+intronic
CAediting_124289chr1_179049725_+intronic
CAediting_124290chr1_179050850_+intronic
CAediting_124291chr1_179050873_+intronic
CAediting_124292chr1_179050897_+intronic
CAediting_124293chr1_179050957_+intronic
CAediting_124294chr1_179050960_+intronic
CAediting_124295chr1_179050961_+intronic
CAediting_124296chr1_179051423_+intronic
CAediting_124297chr1_179051506_+intronic
CAediting_124298chr1_179051678_+intronic
CAediting_124299chr1_179051705_+intronic
CAediting_124300chr1_179051747_+intronic
CAediting_124301chr1_179051764_+intronic
CAediting_124302chr1_179051788_+intronic
CAediting_124303chr1_179057300_+intronic
CAediting_124304chr1_179062529_+intronic
CAediting_124305chr1_179062539_+intronic
CAediting_124306chr1_179062556_+intronic
CAediting_124307chr1_179062599_+intronic
CAediting_124308chr1_179062605_+intronic
CAediting_124309chr1_179062620_+intronic
CAediting_124310chr1_179063082_+intronic
CAediting_124311chr1_179067333_+intronic
CAediting_124312chr1_179067833_+intronic
CAediting_124313chr1_179067864_+intronic
CAediting_124314chr1_179068015_+intronic
CAediting_124315chr1_179068025_+intronic
CAediting_124316chr1_179068031_+intronic
CAediting_124317chr1_179068561_+intronic
CAediting_124318chr1_179068699_+intronic
CAediting_124319chr1_179070110_+intronic
CAediting_124320chr1_179073337_+UTR3
CAediting_124321chr1_179073341_+UTR3
CAediting_124322chr1_179073347_+UTR3
CAediting_124323chr1_179073359_+UTR3
CAediting_124324chr1_179073366_+UTR3
CAediting_124325chr1_179073377_+UTR3
CAediting_124326chr1_179073380_+UTR3
CAediting_124327chr1_179073390_+UTR3
CAediting_124328chr1_179073395_+UTR3
CAediting_124329chr1_179073409_+UTR3
CAediting_124330chr1_179073416_+UTR3
CAediting_124331chr1_179073420_+UTR3
CAediting_124332chr1_179073433_+UTR3
CAediting_124333chr1_179073440_+UTR3
CAediting_124334chr1_179073445_+UTR3
CAediting_124335chr1_179073452_+UTR3
CAediting_124336chr1_179073455_+UTR3
CAediting_124337chr1_179073457_+UTR3
CAediting_124338chr1_179073477_+UTR3
CAediting_124339chr1_179073481_+UTR3
CAediting_124340chr1_179073488_+UTR3
CAediting_124341chr1_179073496_+UTR3
CAediting_124342chr1_179073505_+UTR3
CAediting_124343chr1_179073520_+UTR3
CAediting_124344chr1_179073532_+UTR3
CAediting_124345chr1_179073538_+UTR3
CAediting_124346chr1_179073552_+UTR3
CAediting_124347chr1_179073557_+UTR3
CAediting_124348chr1_179073562_+UTR3
CAediting_124349chr1_179073566_+UTR3
CAediting_124350chr1_179073575_+UTR3
CAediting_124351chr1_179073584_+UTR3
CAediting_124352chr1_179073585_+UTR3
CAediting_124353chr1_179073594_+UTR3
CAediting_124354chr1_179073597_+UTR3
CAediting_124355chr1_179073599_+UTR3
CAediting_124356chr1_179073603_+UTR3
CAediting_124357chr1_179073606_+UTR3
CAediting_124358chr1_179073610_+UTR3
CAediting_124359chr1_179073624_+UTR3
CAediting_124360chr1_179073631_+UTR3
CAediting_124361chr1_179073632_+UTR3
CAediting_124362chr1_179073770_+UTR3
CAediting_124363chr1_179074869_+UTR3
CAediting_124364chr1_179074927_+UTR3
CAediting_124365chr1_179074936_+UTR3
CAediting_124366chr1_179074941_+UTR3
CAediting_124367chr1_179074944_+UTR3
CAediting_124368chr1_179074951_+UTR3
CAediting_124369chr1_179074967_+UTR3
CAediting_124370chr1_179074970_+UTR3
CAediting_124371chr1_179074975_+UTR3
CAediting_124372chr1_179074980_+UTR3
CAediting_124373chr1_179074983_+UTR3
CAediting_124374chr1_179074994_+UTR3
CAediting_124375chr1_179075007_+UTR3
CAediting_124376chr1_179075016_+UTR3
CAediting_124377chr1_179075027_+UTR3
CAediting_124378chr1_179075031_+UTR3
CAediting_124379chr1_179075032_+UTR3
CAediting_124380chr1_179075033_+UTR3
CAediting_124381chr1_179075034_+UTR3
CAediting_124382chr1_179075038_+UTR3
CAediting_124383chr1_179075039_+UTR3
CAediting_124384chr1_179075040_+UTR3
CAediting_124385chr1_179075042_+UTR3
CAediting_124386chr1_179075045_+UTR3
CAediting_124387chr1_179075046_+UTR3
CAediting_124388chr1_179075053_+UTR3
CAediting_124389chr1_179075061_+UTR3
CAediting_124390chr1_179075088_+UTR3
CAediting_124391chr1_179075094_+UTR3
CAediting_124392chr1_179075104_+UTR3
CAediting_124393chr1_179075107_+UTR3
CAediting_124394chr1_179075112_+UTR3
CAediting_124395chr1_179075113_+UTR3
CAediting_124396chr1_179075120_+UTR3
CAediting_124397chr1_179075125_+UTR3
CAediting_124398chr1_179075126_+UTR3
CAediting_124399chr1_179075133_+UTR3
CAediting_124400chr1_179075137_+UTR3
CAediting_124401chr1_179075142_+UTR3
CAediting_124402chr1_179075144_+UTR3
CAediting_124403chr1_179075162_+UTR3
CAediting_124404chr1_179075174_+UTR3
CAediting_124405chr1_179075176_+UTR3
CAediting_124406chr1_179075180_+UTR3
CAediting_124407chr1_179075182_+UTR3
CAediting_124408chr1_179075194_+UTR3
CAediting_124409chr1_179075197_+UTR3
CAediting_124410chr1_179075198_+UTR3
CAediting_124411chr1_179075204_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_124258chr1_179036010_+SINEAluAluSx1
CAediting_124259chr1_179037554_+SINEAluAluSx1
CAediting_124260chr1_179037761_+SINEAluAluSx1
CAediting_124261chr1_179038145_+SINEAluAluSp
CAediting_124262chr1_179038153_+SINEAluAluSp
CAediting_124263chr1_179038154_+SINEAluAluSp
CAediting_124264chr1_179038184_+SINEAluAluSp
CAediting_124265chr1_179038194_+SINEAluAluSp
CAediting_124266chr1_179038208_+SINEAluAluSp
CAediting_124267chr1_179038223_+SINEAluAluSp
CAediting_124268chr1_179038250_+SINEAluAluSp
CAediting_124269chr1_179038251_+SINEAluAluSp
CAediting_124270chr1_179038290_+SINEAluAluSp
CAediting_124271chr1_179038291_+SINEAluAluSp
CAediting_124272chr1_179038331_+SINEAluAluSp
CAediting_124273chr1_179038332_+SINEAluAluSp
CAediting_124274chr1_179038340_+SINEAluAluSp
CAediting_124275chr1_179038356_+SINEAluAluSp
CAediting_124276chr1_179038361_+SINEAluAluSp
CAediting_124277chr1_179038363_+SINEAluAluSp
CAediting_124278chr1_179038401_+SINEAluAluSp
CAediting_124279chr1_179038402_+SINEAluAluSp
CAediting_124280chr1_179045723_+SINEAluAluJr
CAediting_124281chr1_179045763_+SINEAluAluJr
CAediting_124282chr1_179045765_+SINEAluAluJr
CAediting_124283chr1_179046395_+SINEAluAluSp
CAediting_124284chr1_179046396_+SINEAluAluSp
CAediting_124285chr1_179049641_+SINEAluAluSx1
CAediting_124286chr1_179049670_+SINEAluAluSx1
CAediting_124287chr1_179049680_+SINEAluAluSx1
CAediting_124288chr1_179049682_+SINEAluAluSx1
CAediting_124289chr1_179049725_+SINEAluAluSx1
CAediting_124290chr1_179050850_+SINEAluAluSx3
CAediting_124291chr1_179050873_+SINEAluAluSx3
CAediting_124292chr1_179050897_+SINEAluAluSx3
CAediting_124293chr1_179050957_+SINEAluAluSx3
CAediting_124294chr1_179050960_+SINEAluAluSx3
CAediting_124295chr1_179050961_+SINEAluAluSx3
CAediting_124296chr1_179051423_+SINEAluAluJb
CAediting_124297chr1_179051506_+SINEAluAluJb
CAediting_124298chr1_179051678_+SINEAluAluSx3
CAediting_124299chr1_179051705_+SINEAluAluSx3
CAediting_124300chr1_179051747_+SINEAluAluSx3
CAediting_124301chr1_179051764_+SINEAluAluSx3
CAediting_124302chr1_179051788_+SINEAluAluSx3
CAediting_124303chr1_179057300_+SINEAluAluSz
CAediting_124304chr1_179062529_+SINEAluAluSg4
CAediting_124305chr1_179062539_+SINEAluAluSg4
CAediting_124306chr1_179062556_+SINEAluAluSg4
CAediting_124307chr1_179062599_+SINEAluAluSg4
CAediting_124308chr1_179062605_+SINEAluAluSg4
CAediting_124309chr1_179062620_+SINEAluAluSg4
CAediting_124310chr1_179063082_+SINEAluAluSx
CAediting_124311chr1_179067333_+SINEAluAluSx1
CAediting_124312chr1_179067833_+SINEAluAluSx1
CAediting_124313chr1_179067864_+SINEAluAluSx1
CAediting_124314chr1_179068015_+SINEAluAluSx1
CAediting_124315chr1_179068025_+SINEAluAluSx1
CAediting_124316chr1_179068031_+SINEAluAluSx1
CAediting_124317chr1_179068561_+SINEAluAluSg4
CAediting_124318chr1_179068699_+SINEAluAluSg4
CAediting_124319chr1_179070110_+SINEAluAluSz
CAediting_124320chr1_179073337_+SINEAluAluSx1
CAediting_124321chr1_179073341_+SINEAluAluSx1
CAediting_124322chr1_179073347_+SINEAluAluSx1
CAediting_124323chr1_179073359_+SINEAluAluSx1
CAediting_124324chr1_179073366_+SINEAluAluSx1
CAediting_124325chr1_179073377_+SINEAluAluSx1
CAediting_124326chr1_179073380_+SINEAluAluSx1
CAediting_124327chr1_179073390_+SINEAluAluSx1
CAediting_124328chr1_179073395_+SINEAluAluSx1
CAediting_124329chr1_179073409_+SINEAluAluSx1
CAediting_124330chr1_179073416_+SINEAluAluSx1
CAediting_124331chr1_179073420_+SINEAluAluSx1
CAediting_124332chr1_179073433_+SINEAluAluSx1
CAediting_124333chr1_179073440_+SINEAluAluSx1
CAediting_124334chr1_179073445_+SINEAluAluSx1
CAediting_124335chr1_179073452_+SINEAluAluSx1
CAediting_124336chr1_179073455_+SINEAluAluSx1
CAediting_124337chr1_179073457_+SINEAluAluSx1
CAediting_124338chr1_179073477_+SINEAluAluSx1
CAediting_124339chr1_179073481_+SINEAluAluSx1
CAediting_124340chr1_179073488_+SINEAluAluSx1
CAediting_124341chr1_179073496_+SINEAluAluSx1
CAediting_124342chr1_179073505_+SINEAluAluSx1
CAediting_124343chr1_179073520_+SINEAluAluSx1
CAediting_124344chr1_179073532_+SINEAluAluSx1
CAediting_124345chr1_179073538_+SINEAluAluSx1
CAediting_124346chr1_179073552_+SINEAluAluSx1
CAediting_124347chr1_179073557_+SINEAluAluSx1
CAediting_124348chr1_179073562_+SINEAluAluSx1
CAediting_124349chr1_179073566_+SINEAluAluSx1
CAediting_124350chr1_179073575_+SINEAluAluSx1
CAediting_124351chr1_179073584_+SINEAluAluSx1
CAediting_124352chr1_179073585_+SINEAluAluSx1
CAediting_124353chr1_179073594_+SINEAluAluSx1
CAediting_124354chr1_179073597_+SINEAluAluSx1
CAediting_124355chr1_179073599_+SINEAluAluSx1
CAediting_124356chr1_179073603_+SINEAluAluSx1
CAediting_124357chr1_179073606_+SINEAluAluSx1
CAediting_124358chr1_179073610_+SINEAluAluSx1
CAediting_124364chr1_179074927_+SINEAluAluSx
CAediting_124365chr1_179074936_+SINEAluAluSx
CAediting_124366chr1_179074941_+SINEAluAluSx
CAediting_124367chr1_179074944_+SINEAluAluSx
CAediting_124368chr1_179074951_+SINEAluAluSx
CAediting_124369chr1_179074967_+SINEAluAluSx
CAediting_124370chr1_179074970_+SINEAluAluSx
CAediting_124371chr1_179074975_+SINEAluAluSx
CAediting_124372chr1_179074980_+SINEAluAluSx
CAediting_124373chr1_179074983_+SINEAluAluSx
CAediting_124374chr1_179074994_+SINEAluAluSx
CAediting_124375chr1_179075007_+SINEAluAluSx
CAediting_124376chr1_179075016_+SINEAluAluSx
CAediting_124377chr1_179075027_+SINEAluAluSx
CAediting_124378chr1_179075031_+SINEAluAluSx
CAediting_124379chr1_179075032_+SINEAluAluSx
CAediting_124380chr1_179075033_+SINEAluAluSx
CAediting_124381chr1_179075034_+SINEAluAluSx
CAediting_124382chr1_179075038_+SINEAluAluSx
CAediting_124383chr1_179075039_+SINEAluAluSx
CAediting_124384chr1_179075040_+SINEAluAluSx
CAediting_124385chr1_179075042_+SINEAluAluSx
CAediting_124386chr1_179075045_+SINEAluAluSx
CAediting_124387chr1_179075046_+SINEAluAluSx
CAediting_124388chr1_179075053_+SINEAluAluSx
CAediting_124389chr1_179075061_+SINEAluAluSx
CAediting_124390chr1_179075088_+SINEAluAluSx
CAediting_124391chr1_179075094_+SINEAluAluSx
CAediting_124392chr1_179075104_+SINEAluAluSx
CAediting_124393chr1_179075107_+SINEAluAluSx
CAediting_124394chr1_179075112_+SINEAluAluSx
CAediting_124395chr1_179075113_+SINEAluAluSx
CAediting_124396chr1_179075120_+SINEAluAluSx
CAediting_124397chr1_179075125_+SINEAluAluSx
CAediting_124398chr1_179075126_+SINEAluAluSx
CAediting_124399chr1_179075133_+SINEAluAluSx
CAediting_124400chr1_179075137_+SINEAluAluSx
CAediting_124401chr1_179075142_+SINEAluAluSx
CAediting_124402chr1_179075144_+SINEAluAluSx
CAediting_124403chr1_179075162_+SINEAluAluSx
CAediting_124404chr1_179075174_+SINEAluAluSx
CAediting_124405chr1_179075176_+SINEAluAluSx
CAediting_124406chr1_179075180_+SINEAluAluSx
CAediting_124407chr1_179075182_+SINEAluAluSx
CAediting_124408chr1_179075194_+SINEAluAluSx
CAediting_124409chr1_179075197_+SINEAluAluSx
CAediting_124410chr1_179075198_+SINEAluAluSx
CAediting_124411chr1_179075204_+SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for FAM20B

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_124329chr1_179073409_+179073408:1790734165SS2+0iCAGGTTCAA1.19CGGGTTCAA-6.26
IRCAediting_124330chr1_179073416_+179073408:1790734165SS0+6iCAGGTTCAA1.19CAGGTTCAG2.78
IRCAediting_124344chr1_179073532_+179073531:1790735395SS2+0iCAGGTTGAT3.82CGGGTTGAT-3.41
IRCAediting_124345chr1_179073538_+179073531:1790735395SS0+5iCAGGTTGAT3.82CAGGTTGGT8.08
IRCAediting_124369chr1_179074967_+179074961:1790749833SS0+14iAGGCAGATCACCTGAGGCCAGGA-25.3AGGCAGGTCACCTGAGGCCAGGA-24.8
IRCAediting_124370chr1_179074970_+179074961:1790749833SS0+11iAGGCAGATCACCTGAGGCCAGGA-25.3AGGCAGATCGCCTGAGGCCAGGA-23.89
IRCAediting_124371chr1_179074975_+179074961:1790749833SS0+6iAGGCAGATCACCTGAGGCCAGGA-25.3AGGCAGATCACCTGGGGCCAGGA-20.2
IRCAediting_124372chr1_179074980_+179074961:1790749833SS0+1iAGGCAGATCACCTGAGGCCAGGA-25.3AGGCAGATCACCTGAGGCCGGGA-16.55
IRCAediting_124373chr1_179074983_+179074961:1790749833SS3+0iAGGCAGATCACCTGAGGCCAGGA-25.3AGGCAGATCACCTGAGGCCAGGG-25.5
IRCAediting_124390chr1_179075088_+179075079:1790751013SS0+11iCTACTCGGGAGGCTGAGGCAGGA-42.86CTACTCGGGGGGCTGAGGCAGGA-37.45
IRCAediting_124391chr1_179075094_+179075079:1790751013SS0+5iCTACTCGGGAGGCTGAGGCAGGA-42.86CTACTCGGGAGGCTGGGGCAGGA-35.9

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000116199.10.FAM20B.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000116199.10.FAM20B.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM20B

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
ACC.CAediting_124370.ENSG00000116199.FAM20B.png
Soverview
BLCA.CAediting_124329.ENSG00000116199.FAM20B.png
Soverview
BLCA.CAediting_124330.ENSG00000116199.FAM20B.png
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BRCA.CAediting_124329.ENSG00000116199.FAM20B.png
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BRCA.CAediting_124330.ENSG00000116199.FAM20B.png
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BRCA.CAediting_124339.ENSG00000116199.FAM20B.png
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BRCA.CAediting_124348.ENSG00000116199.FAM20B.png
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BRCA.CAediting_124349.ENSG00000116199.FAM20B.png
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BRCA.CAediting_124386.ENSG00000116199.FAM20B.png
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COAD.CAediting_124339.ENSG00000116199.FAM20B.png
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ESCA.CAediting_124329.ENSG00000116199.FAM20B.png
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KIRP.CAediting_124362.ENSG00000116199.FAM20B.png
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LIHC.CAediting_124362.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124329.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124330.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124334.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124336.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124339.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124347.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124349.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124362.ENSG00000116199.FAM20B.png
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LUAD.CAediting_124393.ENSG00000116199.FAM20B.png
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LUSC.CAediting_124339.ENSG00000116199.FAM20B.png
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LUSC.CAediting_124349.ENSG00000116199.FAM20B.png
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LUSC.CAediting_124362.ENSG00000116199.FAM20B.png
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LUSC.CAediting_124371.ENSG00000116199.FAM20B.png
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OV.CAediting_124329.ENSG00000116199.FAM20B.png
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OV.CAediting_124334.ENSG00000116199.FAM20B.png
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PCPG.CAediting_124322.ENSG00000116199.FAM20B.png
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PCPG.CAediting_124339.ENSG00000116199.FAM20B.png
Soverview
PCPG.CAediting_124347.ENSG00000116199.FAM20B.png
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PCPG.CAediting_124348.ENSG00000116199.FAM20B.png
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PCPG.CAediting_124349.ENSG00000116199.FAM20B.png
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PRAD.CAediting_124386.ENSG00000116199.FAM20B.png
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READ.CAediting_124386.ENSG00000116199.FAM20B.png
Soverview
SKCM.CAediting_124339.ENSG00000116199.FAM20B.png
Soverview
SKCM.CAediting_124348.ENSG00000116199.FAM20B.png
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SKCM.CAediting_124349.ENSG00000116199.FAM20B.png
Soverview
SKCM.CAediting_124386.ENSG00000116199.FAM20B.png
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TGCT.CAediting_124339.ENSG00000116199.FAM20B.png
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TGCT.CAediting_124340.ENSG00000116199.FAM20B.png
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TGCT.CAediting_124362.ENSG00000116199.FAM20B.png
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TGCT.CAediting_124371.ENSG00000116199.FAM20B.png
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TGCT.CAediting_124384.ENSG00000116199.FAM20B.png
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UCEC.CAediting_124349.ENSG00000116199.FAM20B.png
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UCEC.CAediting_124371.ENSG00000116199.FAM20B.png
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UCEC.CAediting_124386.ENSG00000116199.FAM20B.png
Soverview

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Protein coding region RNA A-to-I editings for FAM20B

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for FAM20B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network
boxplot

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The effects of the RNA editing to the stability of the RNA structures for FAM20B

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000263733.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_124320ENST00000263733.4chr1_179073337_+-2083.70-2084.30-2095.60
CAediting_124321ENST00000263733.4chr1_179073341_+-2083.80-2084.30-2095.60
CAediting_124322ENST00000263733.4chr1_179073347_+-2089.70-2084.30-2095.60
CAediting_124323ENST00000263733.4chr1_179073359_+-2083.60-2084.30-2095.60
CAediting_124324ENST00000263733.4chr1_179073366_+-2083.40-2084.30-2095.60
CAediting_124325ENST00000263733.4chr1_179073377_+-2083.90-2084.30-2095.60
CAediting_124326ENST00000263733.4chr1_179073380_+-2083.80-2084.30-2095.60
CAediting_124327ENST00000263733.4chr1_179073390_+-2083.30-2084.30-2095.60
CAediting_124328ENST00000263733.4chr1_179073395_+-2084.00-2084.30-2095.60
CAediting_124329ENST00000263733.4chr1_179073409_+-2088.20-2084.30-2095.60
CAediting_124330ENST00000263733.4chr1_179073416_+-2084.00-2084.30-2095.60
CAediting_124331ENST00000263733.4chr1_179073420_+-2083.70-2084.30-2095.60
CAediting_124332ENST00000263733.4chr1_179073433_+-2083.60-2084.30-2095.60
CAediting_124333ENST00000263733.4chr1_179073440_+-2086.20-2084.30-2095.60
CAediting_124334ENST00000263733.4chr1_179073445_+-2084.00-2084.30-2095.60
CAediting_124335ENST00000263733.4chr1_179073452_+-2080.70-2084.30-2095.60
CAediting_124336ENST00000263733.4chr1_179073455_+-2084.30-2084.30-2095.60
CAediting_124337ENST00000263733.4chr1_179073457_+-2083.60-2084.30-2095.60
CAediting_124338ENST00000263733.4chr1_179073477_+-2084.70-2084.30-2095.60
CAediting_124339ENST00000263733.4chr1_179073481_+-2084.40-2084.30-2095.60
CAediting_124340ENST00000263733.4chr1_179073488_+-2090.80-2084.30-2095.60
CAediting_124341ENST00000263733.4chr1_179073496_+-2084.00-2084.30-2095.60
CAediting_124342ENST00000263733.4chr1_179073505_+-2084.30-2084.30-2095.60
CAediting_124343ENST00000263733.4chr1_179073520_+-2083.90-2084.30-2095.60
CAediting_124344ENST00000263733.4chr1_179073532_+-2083.70-2084.30-2095.60
CAediting_124345ENST00000263733.4chr1_179073538_+-2091.00-2084.30-2095.60
CAediting_124346ENST00000263733.4chr1_179073552_+-2091.50-2084.30-2095.60
CAediting_124347ENST00000263733.4chr1_179073557_+-2083.60-2084.30-2095.60
CAediting_124348ENST00000263733.4chr1_179073562_+-2083.70-2084.30-2095.60
CAediting_124349ENST00000263733.4chr1_179073566_+-2088.20-2084.30-2095.60
CAediting_124350ENST00000263733.4chr1_179073575_+-2083.60-2084.30-2095.60
CAediting_124351ENST00000263733.4chr1_179073584_+-2084.40-2084.30-2095.60
CAediting_124352ENST00000263733.4chr1_179073585_+-2084.30-2084.30-2095.60
CAediting_124353ENST00000263733.4chr1_179073594_+-2083.70-2084.30-2095.60
CAediting_124354ENST00000263733.4chr1_179073597_+-2084.60-2084.30-2095.60
CAediting_124355ENST00000263733.4chr1_179073599_+-2083.60-2084.30-2095.60
CAediting_124356ENST00000263733.4chr1_179073603_+-2083.90-2084.30-2095.60
CAediting_124357ENST00000263733.4chr1_179073606_+-2083.40-2084.30-2095.60
CAediting_124358ENST00000263733.4chr1_179073610_+-2083.90-2084.30-2095.60
CAediting_124359ENST00000263733.4chr1_179073624_+-2084.30-2084.30-2095.60
CAediting_124360ENST00000263733.4chr1_179073631_+-2084.30-2084.30-2095.60
CAediting_124361ENST00000263733.4chr1_179073632_+-2084.30-2084.30-2095.60
CAediting_124362ENST00000263733.4chr1_179073770_+-2083.90-2084.30-2095.60
CAediting_124363ENST00000263733.4chr1_179074869_+-2084.30-2084.30-2095.60
CAediting_124364ENST00000263733.4chr1_179074927_+-2083.90-2084.30-2095.60
CAediting_124365ENST00000263733.4chr1_179074936_+-2084.60-2084.30-2095.60
CAediting_124366ENST00000263733.4chr1_179074941_+-2083.60-2084.30-2095.60
CAediting_124367ENST00000263733.4chr1_179074944_+-2083.90-2084.30-2095.60
CAediting_124368ENST00000263733.4chr1_179074951_+-2083.50-2084.30-2095.60
CAediting_124369ENST00000263733.4chr1_179074967_+-2083.70-2084.30-2095.60
CAediting_124370ENST00000263733.4chr1_179074970_+-2083.90-2084.30-2095.60
CAediting_124371ENST00000263733.4chr1_179074975_+-2091.20-2084.30-2095.60
CAediting_124372ENST00000263733.4chr1_179074980_+-2083.60-2084.30-2095.60
CAediting_124373ENST00000263733.4chr1_179074983_+-2083.40-2084.30-2095.60
CAediting_124374ENST00000263733.4chr1_179074994_+-2083.50-2084.30-2095.60
CAediting_124375ENST00000263733.4chr1_179075007_+-2084.20-2084.30-2095.60
CAediting_124376ENST00000263733.4chr1_179075016_+-2083.30-2084.30-2095.60
CAediting_124377ENST00000263733.4chr1_179075027_+-2083.30-2084.30-2095.60
CAediting_124378ENST00000263733.4chr1_179075031_+-2084.40-2084.30-2095.60
CAediting_124379ENST00000263733.4chr1_179075032_+-2084.40-2084.30-2095.60
CAediting_124380ENST00000263733.4chr1_179075033_+-2084.40-2084.30-2095.60
CAediting_124381ENST00000263733.4chr1_179075034_+-2084.30-2084.30-2095.60
CAediting_124382ENST00000263733.4chr1_179075038_+-2084.70-2084.30-2095.60
CAediting_124383ENST00000263733.4chr1_179075039_+-2084.40-2084.30-2095.60
CAediting_124384ENST00000263733.4chr1_179075040_+-2084.40-2084.30-2095.60
CAediting_124385ENST00000263733.4chr1_179075042_+-2084.30-2084.30-2095.60
CAediting_124386ENST00000263733.4chr1_179075045_+-2084.00-2084.30-2095.60
CAediting_124387ENST00000263733.4chr1_179075046_+-2091.00-2084.30-2095.60
CAediting_124388ENST00000263733.4chr1_179075053_+-2083.90-2084.30-2095.60
CAediting_124389ENST00000263733.4chr1_179075061_+-2087.80-2084.30-2095.60
CAediting_124390ENST00000263733.4chr1_179075088_+-2083.40-2084.30-2095.60
CAediting_124391ENST00000263733.4chr1_179075094_+-2083.40-2084.30-2095.60
CAediting_124392ENST00000263733.4chr1_179075104_+-2084.30-2084.30-2095.60
CAediting_124393ENST00000263733.4chr1_179075107_+-2089.70-2084.30-2095.60
CAediting_124394ENST00000263733.4chr1_179075112_+-2083.80-2084.30-2095.60
CAediting_124395ENST00000263733.4chr1_179075113_+-2081.90-2084.30-2095.60
CAediting_124396ENST00000263733.4chr1_179075120_+-2083.40-2084.30-2095.60
CAediting_124397ENST00000263733.4chr1_179075125_+-2091.20-2084.30-2095.60
CAediting_124398ENST00000263733.4chr1_179075126_+-2084.30-2084.30-2095.60
CAediting_124399ENST00000263733.4chr1_179075133_+-2083.60-2084.30-2095.60
CAediting_124400ENST00000263733.4chr1_179075137_+-2083.50-2084.30-2095.60
CAediting_124401ENST00000263733.4chr1_179075142_+-2083.50-2084.30-2095.60
CAediting_124402ENST00000263733.4chr1_179075144_+-2083.70-2084.30-2095.60
CAediting_124403ENST00000263733.4chr1_179075162_+-2083.60-2084.30-2095.60
CAediting_124404ENST00000263733.4chr1_179075174_+-2083.60-2084.30-2095.60
CAediting_124405ENST00000263733.4chr1_179075176_+-2083.40-2084.30-2095.60
CAediting_124406ENST00000263733.4chr1_179075180_+-2083.40-2084.30-2095.60
CAediting_124407ENST00000263733.4chr1_179075182_+-2083.70-2084.30-2095.60
CAediting_124408ENST00000263733.4chr1_179075194_+-2085.20-2084.30-2095.60
CAediting_124409ENST00000263733.4chr1_179075197_+-2085.90-2084.30-2095.60
CAediting_124410ENST00000263733.4chr1_179075198_+-2085.90-2084.30-2095.60
CAediting_124411ENST00000263733.4chr1_179075204_+-2084.30-2084.30-2095.60

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Relation with ADAR for FAM20B

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_124322chr1_179073347_+2.24364156523338e-370.444223521345882....
CESCCAediting_124322chr1_179073347_+0.003012270989558770.28954169198323....
LUADCAediting_124322chr1_179073347_+1.05898112334826e-050.352188158577027....
LUSCCAediting_124322chr1_179073347_+1.53523036702198e-080.337603621376423....
GBMCAediting_124322chr1_179073347_+0.01182994367590810.295176227759816....
PRADCAediting_124322chr1_179073347_+0.0004390512116240780.328097229284017....
HNSCCAediting_124322chr1_179073347_+0.002937756733508920.268192071053403....
STADCAediting_124322chr1_179073347_+0.001207470101008330.213549592154928....
THCACAediting_124322chr1_179073347_+0.03474930600864150.175487116375724..0.01746830292369640.197139413043261
ESCACAediting_124322chr1_179073347_+0.04152726827869870.165002781960615....
OVCAediting_124322chr1_179073347_+1.18590080038171e-070.309501284542933....
PCPGCAediting_124322chr1_179073347_+0.001162923999902590.446202338764067....
SKCMCAediting_124322chr1_179073347_+5.05442794628488e-070.353147661651048....
OVCAediting_124325chr1_179073377_+0.002468120911594320.220126595823127....
BRCACAediting_124329chr1_179073409_+2.78844974965417e-130.376256668897662....
LUADCAediting_124329chr1_179073409_+0.01032298556972060.334304115938745....
LUSCCAediting_124329chr1_179073409_+0.004548512680202630.257332865398757....
STADCAediting_124329chr1_179073409_+0.0001879143556458460.273426482647694....
ESCACAediting_124329chr1_179073409_+0.02141831568833730.198611943188617....
OVCAediting_124329chr1_179073409_+3.35896474286328e-080.339792467963292....
BRCACAediting_124330chr1_179073416_+3.35838223153682e-140.375913355448528....
LUADCAediting_124330chr1_179073416_+0.004268024392430650.335217993547004....
LUSCCAediting_124330chr1_179073416_+0.001577986852640410.268449348641302....
STADCAediting_124330chr1_179073416_+0.001040422866117910.236095466891471....
OVCAediting_124330chr1_179073416_+0.0002870490227090630.228399088280252....
SKCMCAediting_124330chr1_179073416_+0.002409453486380250.279145217984068....
LGGCAediting_124334chr1_179073445_+0.00335415234095350.29649664903272....
BRCACAediting_124334chr1_179073445_+1.00203374694688e-130.301850299581648..0.03537628456215520.0872358595824407
CESCCAediting_124334chr1_179073445_+0.000467920678688970.357497578343823....
LUADCAediting_124334chr1_179073445_+4.81855979264544e-060.357929846825704....
COADCAediting_124334chr1_179073445_+0.04797873789321310.250180992614485....
LUSCCAediting_124334chr1_179073445_+6.53554419142282e-080.329834456626671....
HNSCCAediting_124334chr1_179073445_+0.001597998402935670.248335022101108....
STADCAediting_124334chr1_179073445_+2.3472605590227e-060.310056116409047....
ESCACAediting_124334chr1_179073445_+0.01558601780190130.200533912316538....
OVCAediting_124334chr1_179073445_+9.03056118121745e-060.267459526634195....
PCPGCAediting_124334chr1_179073445_+0.03708158157153320.284479491798135....
SKCMCAediting_124334chr1_179073445_+1.22229589522812e-090.385543951416885....
SARCCAediting_124334chr1_179073445_+0.0002450097290679990.449763136048377....
BRCACAediting_124336chr1_179073455_+7.83905821324154e-130.307267366674282..0.007128066517562350.117871494324553
CESCCAediting_124336chr1_179073455_+0.0002343359634445540.412628121700621....
LUADCAediting_124336chr1_179073455_+7.17528651981602e-070.385726221995769....
LUSCCAediting_124336chr1_179073455_+3.99521451077768e-100.40400576954511....
HNSCCAediting_124336chr1_179073455_+0.02284507411914660.186391105543923....
STADCAediting_124336chr1_179073455_+0.0247393342270340.174788823910187....
ESCACAediting_124336chr1_179073455_+0.0006733953557060940.289056744803574....
OVCAediting_124336chr1_179073455_+8.45156082794528e-080.350834747934633....
PCPGCAediting_124336chr1_179073455_+0.01274082309297450.346510093221659....
SKCMCAediting_124336chr1_179073455_+2.22823926311261e-060.344228091444366....
SARCCAediting_124336chr1_179073455_+0.00116883353079340.422811332567269....
BLCACAediting_124339chr1_179073481_+9.15564093560795e-090.35204086926071....
LGGCAediting_124339chr1_179073481_+2.58269008565739e-080.299642639902478....
BRCACAediting_124339chr1_179073481_+1.52523633296338e-540.471184005140431....
LIHCCAediting_124339chr1_179073481_+0.03093375400107430.154595825561293....
CESCCAediting_124339chr1_179073481_+1.04388142773899e-090.395026923790668....
LUADCAediting_124339chr1_179073481_+1.99310814470493e-170.412173174307888....
COADCAediting_124339chr1_179073481_+6.59339985422322e-080.347672583708185....
LUSCCAediting_124339chr1_179073481_+3.64244232622731e-170.380198656254542....
PRADCAediting_124339chr1_179073481_+5.04247526703301e-050.222880007284697....
HNSCCAediting_124339chr1_179073481_+1.31513519507418e-080.28567669304547....
STADCAediting_124339chr1_179073481_+2.9464339563912e-080.336695019152784....
THCACAediting_124339chr1_179073481_+1.34187245770836e-070.263135109724616....
KIRCCAediting_124339chr1_179073481_+0.01434825360131640.127545182112394....
UCECCAediting_124339chr1_179073481_+0.007534757444950320.199123146699016....
ESCACAediting_124339chr1_179073481_+0.003542331192853880.233642567548984....
OVCAediting_124339chr1_179073481_+1.0480343500879e-060.287900653849839....
PCPGCAediting_124339chr1_179073481_+5.38244512603552e-060.398762647494879....
SKCMCAediting_124339chr1_179073481_+4.87298005206993e-230.475311944611144....
SARCCAediting_124339chr1_179073481_+3.86541681620971e-060.341044644098202....
TGCTCAediting_124339chr1_179073481_+1.085471809636e-050.426283331665994....
BLCACAediting_124340chr1_179073488_+8.44080475595861e-060.336070903068456..0.03381176070993070.163854758455486
BRCACAediting_124340chr1_179073488_+3.24307515909895e-240.369399750658763....
LIHCCAediting_124340chr1_179073488_+0.006351881804834360.203268189451414....
CESCCAediting_124340chr1_179073488_+0.01141821506507660.200787238449445....
LUADCAediting_124340chr1_179073488_+2.32123302358201e-110.379379562366055....
LUSCCAediting_124340chr1_179073488_+4.09911080105332e-080.300753302409243....
PRADCAediting_124340chr1_179073488_+0.03202507776413570.167522215564575....
HNSCCAediting_124340chr1_179073488_+0.001774073020280880.195575826007955....
STADCAediting_124340chr1_179073488_+0.00122672756793020.249560150140024....
KIRCCAediting_124340chr1_179073488_+0.04084773025270050.131571417638163....
UCECCAediting_124340chr1_179073488_+0.04150556846825750.192106643601068....
OVCAediting_124340chr1_179073488_+0.001526355330468590.22665042465188....
SKCMCAediting_124340chr1_179073488_+0.002661746812687730.211357165614896....
SARCCAediting_124340chr1_179073488_+0.001607133339335710.27609849413715....
TGCTCAediting_124340chr1_179073488_+0.0006516364517857940.406039185236087....
BLCACAediting_124347chr1_179073557_+0.04860480532522760.1571588120448080.01001613237343380.204333788238501..
BRCACAediting_124347chr1_179073557_+2.62360004694289e-130.259745585880987....
LIHCCAediting_124347chr1_179073557_+0.01494155667618930.210651321484023....
LUADCAediting_124347chr1_179073557_+0.0002341863029236840.23536003151504....
LUSCCAediting_124347chr1_179073557_+3.16228898381859e-100.323274014607641....
GBMCAediting_124347chr1_179073557_+0.03641163559865340.258094712942186....
PRADCAediting_124347chr1_179073557_+4.07838108558313e-050.319346584469071....
HNSCCAediting_124347chr1_179073557_+0.04370561684381970.12519371542402....
STADCAediting_124347chr1_179073557_+1.07420503753812e-050.277653655521893....
THCACAediting_124347chr1_179073557_+0.01240437319997920.184511368522992....
ESCACAediting_124347chr1_179073557_+7.20934294416951e-060.35609630057724....
OVCAediting_124347chr1_179073557_+4.92923613026679e-050.241355480531075....
PCPGCAediting_124347chr1_179073557_+0.007917821575979440.260309192517844....
SKCMCAediting_124347chr1_179073557_+0.0001423180924445790.243626476406216....
SARCCAediting_124347chr1_179073557_+0.0002740511720805730.352963652952248....
BLCACAediting_124348chr1_179073562_+0.03562148659016080.156738464470256....
BRCACAediting_124348chr1_179073562_+2.38962435459039e-190.297068989785526....
CESCCAediting_124348chr1_179073562_+0.0001873192444443140.272753075452112....
LUADCAediting_124348chr1_179073562_+6.77437743916704e-050.237031489166875....
LUSCCAediting_124348chr1_179073562_+7.49371840228278e-060.224627151710934....
PRADCAediting_124348chr1_179073562_+4.95350698741072e-060.287062915846816....
HNSCCAediting_124348chr1_179073562_+0.000169858743076670.213000286331759....
STADCAediting_124348chr1_179073562_+2.62287999908613e-080.34100868983134....
THCACAediting_124348chr1_179073562_+0.03348659174499880.131415251405235....
UCECCAediting_124348chr1_179073562_+0.03821854140212790.171134985726108....
ESCACAediting_124348chr1_179073562_+0.004328896109928740.22798943770923....
OVCAediting_124348chr1_179073562_+0.00155230782458130.187613604128241....
SKCMCAediting_124348chr1_179073562_+1.39967755424579e-110.369281277133145....
BLCACAediting_124349chr1_179073566_+6.68950724938205e-050.264312177800643....
LGGCAediting_124349chr1_179073566_+0.01436572172446940.135063141664....
BRCACAediting_124349chr1_179073566_+3.36912969000791e-260.339852213580811....
LIHCCAediting_124349chr1_179073566_+0.03391509436938580.193815857341796....
CESCCAediting_124349chr1_179073566_+0.0003658135323298730.251405197696111....
LUADCAediting_124349chr1_179073566_+3.74989101906783e-060.254849770994425....
COADCAediting_124349chr1_179073566_+0.02865183786878240.149969513792448....
LUSCCAediting_124349chr1_179073566_+9.94921361072177e-090.275714910488965....
GBMCAediting_124349chr1_179073566_+0.01756842088209390.230262515725739....
PRADCAediting_124349chr1_179073566_+1.61326470110144e-080.31204425314361....
HNSCCAediting_124349chr1_179073566_+8.38555828568995e-050.212896960175789....
STADCAediting_124349chr1_179073566_+1.75833596893633e-050.254854805399446....
THCACAediting_124349chr1_179073566_+0.0005179564338781590.188656390178394....
UCECCAediting_124349chr1_179073566_+0.001229197939041330.239063038505172....
ESCACAediting_124349chr1_179073566_+0.01166187955329470.200844057999097....
OVCAediting_124349chr1_179073566_+1.12620442748228e-060.275382850618541....
PAADCAediting_124349chr1_179073566_+0.004638445416833190.258922591045447....
PCPGCAediting_124349chr1_179073566_+4.17775364524308e-050.356511695504945....
SKCMCAediting_124349chr1_179073566_+1.41343006561268e-140.395297112139703....
SARCCAediting_124349chr1_179073566_+0.007660803203610380.209458165368344....
BRCACAediting_124351chr1_179073584_+0.01147442664851480.134412648240489....
STADCAediting_124351chr1_179073584_+3.94258607926026e-050.26153725406621....
ESCACAediting_124351chr1_179073584_+0.002028449655930510.262394485856457....
BLCACAediting_124362chr1_179073770_+9.63957480786021e-080.328248756833079....
BRCACAediting_124362chr1_179073770_+4.36738549612777e-350.410541834010826....
LIHCCAediting_124362chr1_179073770_+1.09341152654342e-050.279090581318643....
CESCCAediting_124362chr1_179073770_+2.10960827210841e-070.335507732623682....
LUADCAediting_124362chr1_179073770_+3.22027363186483e-140.371634300452011....
COADCAediting_124362chr1_179073770_+0.0007377331632427570.227942338842269....
LUSCCAediting_124362chr1_179073770_+1.5912966911113e-190.416617331658874....
PRADCAediting_124362chr1_179073770_+5.69344443288307e-070.343271554135775....
HNSCCAediting_124362chr1_179073770_+3.2224854962214e-080.272394460025504....
STADCAediting_124362chr1_179073770_+1.22729242020092e-110.379993043962477....
UCECCAediting_124362chr1_179073770_+0.002157054908062380.224785075614991....
KIRPCAediting_124362chr1_179073770_+0.04417539692701010.254447005218364....
ESCACAediting_124362chr1_179073770_+9.09993413847879e-050.309102210775139....
OVCAediting_124362chr1_179073770_+4.81542664676524e-080.308677716909725....
SKCMCAediting_124362chr1_179073770_+2.30711342280833e-100.352163664227765....
SARCCAediting_124362chr1_179073770_+1.1422006810094e-060.388714653465407....
TGCTCAediting_124362chr1_179073770_+1.10251787669016e-110.613948568213393....
BRCACAediting_124370chr1_179074970_+1.47649004004145e-100.256462102648881....
LUADCAediting_124370chr1_179074970_+0.001160617505843540.220098164514206....
PCPGCAediting_124370chr1_179074970_+0.001908119888894270.328275849292471....
BLCACAediting_124371chr1_179074975_+2.43740390489739e-090.332116779032602....
LGGCAediting_124371chr1_179074975_+7.77548279690253e-080.2961124460339....
BRCACAediting_124371chr1_179074975_+2.98611563601396e-380.395978948534845....
LIHCCAediting_124371chr1_179074975_+0.00538304405317760.157467467771267....
CESCCAediting_124371chr1_179074975_+4.83871162288932e-090.360867075326135....
LUADCAediting_124371chr1_179074975_+2.54726456222694e-140.352144397671234....
COADCAediting_124371chr1_179074975_+0.0007733373521125370.20304399919984....
LUSCCAediting_124371chr1_179074975_+3.00877451903519e-130.332707168894702....
GBMCAediting_124371chr1_179074975_+0.02226151976069580.195201486436921....
PRADCAediting_124371chr1_179074975_+1.29149562428927e-100.32737354654262....
HNSCCAediting_124371chr1_179074975_+6.43740336701619e-070.238654832778729....
STADCAediting_124371chr1_179074975_+2.1579703850499e-080.311313438586373....
THCACAediting_124371chr1_179074975_+0.0001990108569211780.182300225450559....
UCECCAediting_124371chr1_179074975_+4.51715370098398e-100.31560838706715....
ACCCAediting_124371chr1_179074975_+0.00022120345391220.48234458059838....
ESCACAediting_124371chr1_179074975_+0.007616727374997170.210912054568857....
OVCAediting_124371chr1_179074975_+2.14153583060278e-080.290193046973187....
PAADCAediting_124371chr1_179074975_+0.0005369672723566590.280241478692022....
PCPGCAediting_124371chr1_179074975_+8.98802890027491e-070.378021436623941....
SKCMCAediting_124371chr1_179074975_+2.69698892717575e-170.424827259981583....
MESOCAediting_124371chr1_179074975_+0.007783600337778250.293714278339018....
SARCCAediting_124371chr1_179074975_+2.21814191895616e-080.378395067014482....
TGCTCAediting_124371chr1_179074975_+2.69543154033913e-070.431349616090749....
THYMCAediting_124371chr1_179074975_+0.02074958115186780.28635282128892....
BRCACAediting_124383chr1_179075039_+7.60449816041865e-080.281347248156309....
LIHCCAediting_124383chr1_179075039_+0.005517734395943850.208957704772401....
LUADCAediting_124383chr1_179075039_+0.008400936141849780.215907416511702....
LUSCCAediting_124383chr1_179075039_+0.0006137640525933840.321558743394154....
KIRCCAediting_124383chr1_179075039_+0.0239960530272920.243289862306898....
UCECCAediting_124383chr1_179075039_+..0.01135082581015220.2928090659471690.000742866121593160.383550201856198
ESCACAediting_124383chr1_179075039_+0.02136004034008790.2895262019057....
SKCMCAediting_124383chr1_179075039_+0.02676314181672140.28596469755425....
BLCACAediting_124384chr1_179075040_+0.004565419516320980.21590888656835....
LGGCAediting_124384chr1_179075040_+0.003838728869235530.314034209731961....
BRCACAediting_124384chr1_179075040_+4.6148727509834e-210.354726556058818....
LIHCCAediting_124384chr1_179075040_+0.04978084791346870.13037549664958....
CESCCAediting_124384chr1_179075040_+0.001220877158162720.262485396869039....
LUADCAediting_124384chr1_179075040_+0.0003735601328740990.226907017934657....
COADCAediting_124384chr1_179075040_+0.009295521579023360.269812036306908....
LUSCCAediting_124384chr1_179075040_+6.88705293946779e-090.354788269692241....
PRADCAediting_124384chr1_179075040_+0.00664435739994850.260891854447384....
HNSCCAediting_124384chr1_179075040_+0.01310091501559120.162678741879962....
STADCAediting_124384chr1_179075040_+0.002420791669047850.203964250419324....
THCACAediting_124384chr1_179075040_+0.0365442092249570.182884933231257....
KIRCCAediting_124384chr1_179075040_+0.003165065849565850.196798923497372....
ESCACAediting_124384chr1_179075040_+0.002568431767026470.258451183090815....
SARCCAediting_124384chr1_179075040_+0.0002053799046540580.353072504093876....
TGCTCAediting_124384chr1_179075040_+3.76989110997979e-050.422200832006174....
BLCACAediting_124386chr1_179075045_+0.0001277960807378970.192769813111832....
LGGCAediting_124386chr1_179075045_+0.0006041353918548280.151515012793891....
BRCACAediting_124386chr1_179075045_+1.81328270564929e-120.21342973919152....
CESCCAediting_124386chr1_179075045_+0.01366788207540020.144663506930895....
LUADCAediting_124386chr1_179075045_+0.001971610094472870.139608430506543....
LUSCCAediting_124386chr1_179075045_+0.01075795020167410.114895058439625....
GBMCAediting_124386chr1_179075045_+0.009033153868489460.207091563291906....
PRADCAediting_124386chr1_179075045_+0.0003407708768755650.164197046169078....
HNSCCAediting_124386chr1_179075045_+0.02310738771876170.104997651718987....
STADCAediting_124386chr1_179075045_+0.0004631654879007510.190252129499058....
KICHCAediting_124386chr1_179075045_+0.02299771346173130.283904606812154....
UCECCAediting_124386chr1_179075045_+1.3448179390233e-060.23687425068368....
KIRPCAediting_124386chr1_179075045_+0.04277304703085320.128243541663809....
OVCAediting_124386chr1_179075045_+0.003275283218743980.152089352777433....
PCPGCAediting_124386chr1_179075045_+0.000150476513660680.285874268089505....
SKCMCAediting_124386chr1_179075045_+1.05396452847817e-080.26792583562065....
UCSCAediting_124386chr1_179075045_+0.0007683607375729410.44029641915457....
READCAediting_124386chr1_179075045_+0.004415378244826340.2444777172674....
THYMCAediting_124386chr1_179075045_+0.0386093016533910.217226174985251....
LGGCAediting_124387chr1_179075046_+0.004183933037134070.201690732971007....
BRCACAediting_124387chr1_179075046_+2.22387107963843e-200.329112541924481....
CESCCAediting_124387chr1_179075046_+0.01149036304319950.198134550402309....
LUADCAediting_124387chr1_179075046_+0.01753188969911050.144738776239702....
LUSCCAediting_124387chr1_179075046_+4.06367708468092e-060.271414070172696....
PRADCAediting_124387chr1_179075046_+0.02107092708367150.165965621778883....
HNSCCAediting_124387chr1_179075046_+0.001949147543352960.20280299421601....
STADCAediting_124387chr1_179075046_+0.002497883248284930.187120087880244....
UCECCAediting_124387chr1_179075046_+0.004553244445140360.189325683924476..0.01394763295300750.164442447265688
OVCAediting_124387chr1_179075046_+6.38881036935594e-050.222259760789108....
PAADCAediting_124387chr1_179075046_+..0.01248204912421260.305942265563043..
SKCMCAediting_124387chr1_179075046_+0.0001964673756412470.234792193679172....
SARCCAediting_124387chr1_179075046_+7.67412239474312e-050.31920723460105....
BRCACAediting_124389chr1_179075061_+0.003922824510757540.245789750784385....
STADCAediting_124389chr1_179075061_+0.001261964017275890.210012185618511....
OVCAediting_124389chr1_179075061_+0.002133202698184230.17435497572612....
BRCACAediting_124393chr1_179075107_+4.43424436561509e-080.240308065909435....
LUADCAediting_124393chr1_179075107_+0.006276174065422450.299446792490013....
STADCAediting_124393chr1_179075107_+1.38089235025321e-070.307951731053655....
OVCAediting_124393chr1_179075107_+0.004217483323618630.15131296370351....
KIRCCAediting_124400chr1_179075137_+0.02672871982473030.293452167559526..0.02690922167792380.293119913808303
BRCACAediting_124402chr1_179075144_+0.0009499850331067780.147656170922705....
LUADCAediting_124402chr1_179075144_+0.02369556529093010.17244143334455....
STADCAediting_124402chr1_179075144_+0.01513658070508290.201396964896822....
PCPGCAediting_124402chr1_179075144_+0.0006295583845903940.432224888034458....
SKCMCAediting_124402chr1_179075144_+0.0001260087102167030.344299703025009....

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Relation with cancer stages for FAM20B

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_124322chr1_179073347_+0.003183871291978980.307618534028527
BLCApathologic_stageCAediting_124336chr1_179073455_+0.04347805434983540.238678037461015
BLCApathologic_stageCAediting_124371chr1_179074975_+0.001027637636509780.186778219758452
BLCApathologic_stageCAediting_124386chr1_179075045_+0.01093731900260480.129063003934182
BRCApathologic_stageCAediting_124337chr1_179073457_+0.01250040816961640.200850917829031
BRCApathologic_stageCAediting_124340chr1_179073488_+0.00337945490959410.111272350592282
BRCApathologic_stageCAediting_124381chr1_179075034_+0.0209393563228850.200081888446796
BRCApathologic_stageCAediting_124384chr1_179075040_+0.02308020103353730.0893197630297121
BRCApathologic_stageCAediting_124387chr1_179075046_+0.02381721119426790.0833605031999857
COADpathologic_stageCAediting_124347chr1_179073557_+0.0347864053414729-0.184605699879018
ESCApathologic_stageCAediting_124383chr1_179075039_+0.04030882211737610.265540256338598
HNSCclinical_stageCAediting_124362chr1_179073770_+0.00142234853643270.160589116275925
HNSCclinical_stageCAediting_124384chr1_179075040_+0.005900508455113440.182213838495733
HNSCpathologic_stageCAediting_124347chr1_179073557_+0.01842227280862980.157033150575953
HNSCpathologic_stageCAediting_124348chr1_179073562_+0.04519508424484320.123380031025146
HNSCpathologic_stageCAediting_124362chr1_179073770_+0.007964246280830550.141229153865255
KIRCpathologic_stageCAediting_124329chr1_179073409_+0.01898955914378190.294836614558048
KIRCpathologic_stageCAediting_124340chr1_179073488_+0.005128208831741630.179754652373394
KIRCpathologic_stageCAediting_124347chr1_179073557_+0.04101028307742510.126341078015883
KIRCpathologic_stageCAediting_124362chr1_179073770_+0.0005815229604669340.236001144989954
KIRCpathologic_stageCAediting_124370chr1_179074970_+0.02095910556284820.153854083572967
KIRCpathologic_stageCAediting_124371chr1_179074975_+0.0001282763117019060.18218784552873
KIRPclinical_stageCAediting_124362chr1_179073770_+0.003458308225807010.426798375928873
KIRPclinical_stageCAediting_124371chr1_179074975_+0.03081350000516040.206980863650773
KIRPclinical_stageCAediting_124386chr1_179075045_+0.03038224999766570.166123438868006
KIRPpathologic_stageCAediting_124339chr1_179073481_+0.01806195672729030.22822526657836
KIRPpathologic_stageCAediting_124347chr1_179073557_+0.04893871069731130.245254445959975
KIRPpathologic_stageCAediting_124348chr1_179073562_+0.03865447574383290.224739174413991
KIRPpathologic_stageCAediting_124349chr1_179073566_+0.0007716157070124370.335819697322526
KIRPpathologic_stageCAediting_124362chr1_179073770_+0.0005336277708652950.437304759190955
KIRPpathologic_stageCAediting_124371chr1_179074975_+0.004427696862739180.232689955632391
KIRPpathologic_stageCAediting_124386chr1_179075045_+0.0009542314020148440.218311630732153
LUADpathologic_stageCAediting_124346chr1_179073552_+0.03513554766173310.189397795739238
LUADpathologic_stageCAediting_124362chr1_179073770_+0.009663084842006340.131732422250959
LUADpathologic_stageCAediting_124371chr1_179074975_+0.04715516037643470.0953362734099763
LUADpathologic_stageCAediting_124386chr1_179075045_+0.04271986585112270.0924402431396436
LUSCpathologic_stageCAediting_124371chr1_179074975_+0.02996864001023370.102107720990175
MESOpathologic_stageCAediting_124347chr1_179073557_+0.0225828073610293-0.309894173022309
MESOpathologic_stageCAediting_124387chr1_179075046_+0.0319972196940335-0.292256212396145
OVclinical_stageCAediting_124351chr1_179073584_+0.004469419029552970.181792341575982
PAADpathologic_stageCAediting_124340chr1_179073488_+0.01087061419733110.292532520140657
SKCMpathologic_stageCAediting_124346chr1_179073552_+0.04472212932400320.203249869445375
TGCTpathologic_stageCAediting_124384chr1_179075040_+0.014578455411288-0.343550996697836
THCApathologic_stageCAediting_124322chr1_179073347_+0.03850646950296120.17206151874091
THCApathologic_stageCAediting_124371chr1_179074975_+0.004444650320677610.140739322989421
THCApathologic_stageCAediting_124386chr1_179075045_+0.04129854989537510.0924092638030335
UCECclinical_stageCAediting_124348chr1_179073562_+0.00312599836157751-0.242158872517884

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Relation with survival for FAM20B

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LGGCAediting_124371chr1_179074975_+0.0304880847266870.00037875873.5478
BRCACAediting_124381chr1_179075034_+0.0285977081435290.01079182.1677e+26
LIHCCAediting_124351chr1_179073584_+0.009628219385709460.047848434.0796
HNSCCAediting_124387chr1_179075046_+0.03061943463769790.032625226.9009
STADCAediting_124325chr1_179073377_+0.005005803656637610.011276768.2898
UCECCAediting_124387chr1_179075046_+0.03123953744170530.042402528.2544
ESCACAediting_124349chr1_179073566_+0.04689879124391870.0078117111.1457
ESCACAediting_124371chr1_179074975_+0.04861731452069960.04422466.15595
ESCACAediting_124402chr1_179075144_+0.00227926900672060.002647345714.7
MESOCAediting_124386chr1_179075045_+0.01083325327141260.0057889523.4988
READCAediting_124386chr1_179075045_+0.04128186261980630.0053066274.078
SARCCAediting_124347chr1_179073557_+0.02435356774276530.044745121.318

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RelatedDrugs for FAM20B

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for FAM20B

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource