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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: CEP350 (CAeditome ID:9857) |
Gene summary for CEP350 |
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Gene information | Gene symbol | CEP350 | Gene ID | 9857 |
Gene name | centrosomal protein 350 | |
Synonyms | CAP350|GM133 | |
Cytomap | 1q25.2 | |
Type of gene | protein-coding | |
Description | centrosome-associated protein 350centrosomal protein 350kDa | |
Modification date | 20210518 | |
UniProtAcc | Q5VT06 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
CEP350 | GO:0005813 | Centrosome-associated protein 350 | 0000052 |
CEP350 | GO:0005813 | Centrosome-associated protein 350 | 21399614 |
CEP350 | GO:0005814 | Centrosome-associated protein 350 | 28625565 |
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RNA A-to-I events for CEP350 |
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CAediting_125762(179959593, +), CAediting_125763(179959595, +), CAediting_125764(179959596, +), CAediting_125765(179959651, +), CAediting_125766(179959666, +), CAediting_125767(179959680, +), CAediting_125768(179961341, +), CAediting_125769(179961349, +), CAediting_125770(179961885, +), CAediting_125771(179961914, +), CAediting_125772(179961939, +), CAediting_125773(179961946, +), CAediting_125774(179961963, +), CAediting_125775(179961985, +), CAediting_125776(179962067, +), CAediting_125777(179962068, +), CAediting_125778(179962069, +), CAediting_125779(179962121, +), CAediting_125780(179967465, +), CAediting_125781(179967538, +), CAediting_125782(179967597, +), CAediting_125783(179968039, +), CAediting_125784(179968041, +), CAediting_125785(179968075, +), CAediting_125786(179968166, +), CAediting_125787(179968210, +), CAediting_125788(179968223, +), CAediting_125789(179968238, +), CAediting_125790(179974742, +), CAediting_125791(179974758, +), CAediting_125792(179974790, +), CAediting_125793(179974806, +), CAediting_125794(179974834, +), CAediting_125795(179974852, +), CAediting_125796(179974870, +), CAediting_125797(179974880, +), CAediting_125798(179974882, +), CAediting_125799(179974884, +), CAediting_125800(179974893, +), CAediting_125801(179974936, +), CAediting_125802(179974940, +), CAediting_125803(179974978, +), CAediting_125804(179976571, +), CAediting_125805(179981759, +), CAediting_125806(179994728, +), CAediting_125807(179997299, +), CAediting_125808(179997325, +), CAediting_125809(179997338, +), CAediting_125810(179997353, +), CAediting_125811(179997354, +), CAediting_125812(179997356, +), CAediting_125813(179997362, +), CAediting_125814(179997363, +), CAediting_125815(179997364, +), CAediting_125816(179997393, +), CAediting_125817(179997396, +), CAediting_125818(179997420, +), CAediting_125819(179997422, +), CAediting_125820(179997428, +), CAediting_125821(179997482, +), CAediting_125822(179998503, +), CAediting_125823(180001265, +), CAediting_125824(180001521, +), CAediting_125825(180001541, +), CAediting_125826(180002240, +), CAediting_125827(180002264, +), CAediting_125828(180002273, +), CAediting_125829(180002275, +), CAediting_125830(180002278, +), CAediting_125831(180002279, +), CAediting_125832(180002309, +), CAediting_125833(180002310, +), CAediting_125834(180002315, +), CAediting_125835(180002316, +), CAediting_125836(180002318, +), CAediting_125837(180002321, +), CAediting_125838(180002322, +), CAediting_125839(180002324, +), CAediting_125840(180002327, +), CAediting_125841(180002334, +), CAediting_125842(180002335, +), CAediting_125843(180002384, +), CAediting_125844(180002394, +), CAediting_125845(180002395, +), CAediting_125846(180002399, +), CAediting_125847(180002469, +), CAediting_125848(180026074, +), CAediting_125849(180026098, +), CAediting_125850(180027398, +), CAediting_125851(180027511, +), CAediting_125852(180027530, +), CAediting_125853(180027587, +), CAediting_125854(180027590, +), CAediting_125855(180027605, +), CAediting_125856(180028521, +), CAediting_125857(180028535, +), CAediting_125858(180028643, +), CAediting_125859(180028644, +), CAediting_125860(180028645, +), CAediting_125861(180028646, +), CAediting_125862(180028786, +), CAediting_125863(180048969, +), CAediting_125864(180050416, +), CAediting_125865(180050613, +), CAediting_125866(180056671, +), CAediting_125867(180060464, +), CAediting_125868(180060534, +), CAediting_125869(180060565, +), CAediting_125870(180060570, +), CAediting_125871(180063738, +), CAediting_125872(180063757, +), CAediting_125873(180063800, +), CAediting_125874(180065576, +), CAediting_125875(180069023, +), CAediting_125876(180071228, +), CAediting_125877(180071352, +), CAediting_125878(180071353, +), CAediting_125879(180084482, +), CAediting_125880(180084746, +), CAediting_125881(180084862, +), CAediting_125882(180091602, +), |
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RNA editing positional annotations for CEP350 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_125762 | chr1_179959593_+ | intronic |
CAediting_125763 | chr1_179959595_+ | intronic |
CAediting_125764 | chr1_179959596_+ | intronic |
CAediting_125765 | chr1_179959651_+ | intronic |
CAediting_125766 | chr1_179959666_+ | intronic |
CAediting_125767 | chr1_179959680_+ | intronic |
CAediting_125768 | chr1_179961341_+ | intronic |
CAediting_125769 | chr1_179961349_+ | intronic |
CAediting_125770 | chr1_179961885_+ | intronic |
CAediting_125771 | chr1_179961914_+ | intronic |
CAediting_125772 | chr1_179961939_+ | intronic |
CAediting_125773 | chr1_179961946_+ | intronic |
CAediting_125774 | chr1_179961963_+ | intronic |
CAediting_125775 | chr1_179961985_+ | intronic |
CAediting_125776 | chr1_179962067_+ | intronic |
CAediting_125777 | chr1_179962068_+ | intronic |
CAediting_125778 | chr1_179962069_+ | intronic |
CAediting_125779 | chr1_179962121_+ | intronic |
CAediting_125780 | chr1_179967465_+ | intronic |
CAediting_125781 | chr1_179967538_+ | intronic |
CAediting_125782 | chr1_179967597_+ | intronic |
CAediting_125783 | chr1_179968039_+ | intronic |
CAediting_125784 | chr1_179968041_+ | intronic |
CAediting_125785 | chr1_179968075_+ | intronic |
CAediting_125786 | chr1_179968166_+ | intronic |
CAediting_125787 | chr1_179968210_+ | intronic |
CAediting_125788 | chr1_179968223_+ | intronic |
CAediting_125789 | chr1_179968238_+ | intronic |
CAediting_125790 | chr1_179974742_+ | intronic |
CAediting_125791 | chr1_179974758_+ | intronic |
CAediting_125792 | chr1_179974790_+ | intronic |
CAediting_125793 | chr1_179974806_+ | intronic |
CAediting_125794 | chr1_179974834_+ | intronic |
CAediting_125795 | chr1_179974852_+ | intronic |
CAediting_125796 | chr1_179974870_+ | intronic |
CAediting_125797 | chr1_179974880_+ | intronic |
CAediting_125798 | chr1_179974882_+ | intronic |
CAediting_125799 | chr1_179974884_+ | intronic |
CAediting_125800 | chr1_179974893_+ | intronic |
CAediting_125801 | chr1_179974936_+ | intronic |
CAediting_125802 | chr1_179974940_+ | intronic |
CAediting_125803 | chr1_179974978_+ | intronic |
CAediting_125804 | chr1_179976571_+ | intronic |
CAediting_125805 | chr1_179981759_+ | intronic |
CAediting_125806 | chr1_179994728_+ | intronic |
CAediting_125807 | chr1_179997299_+ | intronic |
CAediting_125808 | chr1_179997325_+ | intronic |
CAediting_125809 | chr1_179997338_+ | intronic |
CAediting_125810 | chr1_179997353_+ | intronic |
CAediting_125811 | chr1_179997354_+ | intronic |
CAediting_125812 | chr1_179997356_+ | intronic |
CAediting_125813 | chr1_179997362_+ | intronic |
CAediting_125814 | chr1_179997363_+ | intronic |
CAediting_125815 | chr1_179997364_+ | intronic |
CAediting_125816 | chr1_179997393_+ | intronic |
CAediting_125817 | chr1_179997396_+ | intronic |
CAediting_125818 | chr1_179997420_+ | intronic |
CAediting_125819 | chr1_179997422_+ | intronic |
CAediting_125820 | chr1_179997428_+ | intronic |
CAediting_125821 | chr1_179997482_+ | intronic |
CAediting_125822 | chr1_179998503_+ | intronic |
CAediting_125823 | chr1_180001265_+ | intronic |
CAediting_125824 | chr1_180001521_+ | intronic |
CAediting_125825 | chr1_180001541_+ | intronic |
CAediting_125826 | chr1_180002240_+ | intronic |
CAediting_125827 | chr1_180002264_+ | intronic |
CAediting_125828 | chr1_180002273_+ | intronic |
CAediting_125829 | chr1_180002275_+ | intronic |
CAediting_125830 | chr1_180002278_+ | intronic |
CAediting_125831 | chr1_180002279_+ | intronic |
CAediting_125832 | chr1_180002309_+ | intronic |
CAediting_125833 | chr1_180002310_+ | intronic |
CAediting_125834 | chr1_180002315_+ | intronic |
CAediting_125835 | chr1_180002316_+ | intronic |
CAediting_125836 | chr1_180002318_+ | intronic |
CAediting_125837 | chr1_180002321_+ | intronic |
CAediting_125838 | chr1_180002322_+ | intronic |
CAediting_125839 | chr1_180002324_+ | intronic |
CAediting_125840 | chr1_180002327_+ | intronic |
CAediting_125841 | chr1_180002334_+ | intronic |
CAediting_125842 | chr1_180002335_+ | intronic |
CAediting_125843 | chr1_180002384_+ | intronic |
CAediting_125844 | chr1_180002394_+ | intronic |
CAediting_125845 | chr1_180002395_+ | intronic |
CAediting_125846 | chr1_180002399_+ | intronic |
CAediting_125847 | chr1_180002469_+ | intronic |
CAediting_125848 | chr1_180026074_+ | intronic |
CAediting_125849 | chr1_180026098_+ | intronic |
CAediting_125850 | chr1_180027398_+ | intronic |
CAediting_125851 | chr1_180027511_+ | intronic |
CAediting_125852 | chr1_180027530_+ | intronic |
CAediting_125853 | chr1_180027587_+ | intronic |
CAediting_125854 | chr1_180027590_+ | intronic |
CAediting_125855 | chr1_180027605_+ | intronic |
CAediting_125856 | chr1_180028521_+ | intronic |
CAediting_125857 | chr1_180028535_+ | intronic |
CAediting_125858 | chr1_180028643_+ | intronic |
CAediting_125859 | chr1_180028644_+ | intronic |
CAediting_125860 | chr1_180028645_+ | intronic |
CAediting_125861 | chr1_180028646_+ | intronic |
CAediting_125862 | chr1_180028786_+ | intronic |
CAediting_125863 | chr1_180048969_+ | intronic |
CAediting_125864 | chr1_180050416_+ | intronic |
CAediting_125865 | chr1_180050613_+ | intronic |
CAediting_125866 | chr1_180056671_+ | intronic |
CAediting_125867 | chr1_180060464_+ | intronic |
CAediting_125868 | chr1_180060534_+ | intronic |
CAediting_125869 | chr1_180060565_+ | intronic |
CAediting_125870 | chr1_180060570_+ | intronic |
CAediting_125871 | chr1_180063738_+ | intronic |
CAediting_125872 | chr1_180063757_+ | intronic |
CAediting_125873 | chr1_180063800_+ | intronic |
CAediting_125874 | chr1_180065576_+ | intronic |
CAediting_125875 | chr1_180069023_+ | intronic |
CAediting_125876 | chr1_180071228_+ | intronic |
CAediting_125877 | chr1_180071352_+ | intronic |
CAediting_125878 | chr1_180071353_+ | intronic |
CAediting_125879 | chr1_180084482_+ | intronic |
CAediting_125880 | chr1_180084746_+ | intronic |
CAediting_125881 | chr1_180084862_+ | intronic |
CAediting_125882 | chr1_180091602_+ | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_125762 | chr1_179959593_+ | SINE | Alu | AluSx1 |
CAediting_125763 | chr1_179959595_+ | SINE | Alu | AluSx1 |
CAediting_125764 | chr1_179959596_+ | SINE | Alu | AluSx1 |
CAediting_125765 | chr1_179959651_+ | SINE | Alu | AluSx1 |
CAediting_125766 | chr1_179959666_+ | SINE | Alu | AluSx1 |
CAediting_125767 | chr1_179959680_+ | SINE | Alu | AluSx1 |
CAediting_125768 | chr1_179961341_+ | SINE | Alu | AluSz |
CAediting_125769 | chr1_179961349_+ | SINE | Alu | AluSz |
CAediting_125770 | chr1_179961885_+ | SINE | Alu | AluSz |
CAediting_125771 | chr1_179961914_+ | SINE | Alu | AluSz |
CAediting_125772 | chr1_179961939_+ | SINE | Alu | AluSz |
CAediting_125773 | chr1_179961946_+ | SINE | Alu | AluSz |
CAediting_125774 | chr1_179961963_+ | SINE | Alu | AluSz |
CAediting_125775 | chr1_179961985_+ | SINE | Alu | AluSz |
CAediting_125776 | chr1_179962067_+ | SINE | Alu | AluSz |
CAediting_125777 | chr1_179962068_+ | SINE | Alu | AluSz |
CAediting_125778 | chr1_179962069_+ | SINE | Alu | AluSz |
CAediting_125779 | chr1_179962121_+ | SINE | Alu | AluSz |
CAediting_125780 | chr1_179967465_+ | SINE | Alu | AluSx |
CAediting_125781 | chr1_179967538_+ | SINE | Alu | AluSx |
CAediting_125782 | chr1_179967597_+ | SINE | Alu | AluSx |
CAediting_125783 | chr1_179968039_+ | LINE | L2 | L2c |
CAediting_125784 | chr1_179968041_+ | LINE | L2 | L2c |
CAediting_125785 | chr1_179968075_+ | SINE | Alu | AluSx |
CAediting_125786 | chr1_179968166_+ | SINE | Alu | AluSx |
CAediting_125787 | chr1_179968210_+ | SINE | Alu | AluSx |
CAediting_125788 | chr1_179968223_+ | SINE | Alu | AluSx |
CAediting_125789 | chr1_179968238_+ | SINE | Alu | AluSx |
CAediting_125790 | chr1_179974742_+ | SINE | Alu | AluJr4 |
CAediting_125791 | chr1_179974758_+ | SINE | Alu | AluJr4 |
CAediting_125792 | chr1_179974790_+ | SINE | Alu | AluJr4 |
CAediting_125793 | chr1_179974806_+ | SINE | Alu | AluJr4 |
CAediting_125794 | chr1_179974834_+ | SINE | Alu | AluJr4 |
CAediting_125795 | chr1_179974852_+ | SINE | Alu | AluJr4 |
CAediting_125796 | chr1_179974870_+ | SINE | Alu | AluJr4 |
CAediting_125797 | chr1_179974880_+ | SINE | Alu | AluJr4 |
CAediting_125798 | chr1_179974882_+ | SINE | Alu | AluJr4 |
CAediting_125799 | chr1_179974884_+ | SINE | Alu | AluJr4 |
CAediting_125800 | chr1_179974893_+ | SINE | Alu | AluJr4 |
CAediting_125801 | chr1_179974936_+ | SINE | Alu | AluJr4 |
CAediting_125802 | chr1_179974940_+ | SINE | Alu | AluJr4 |
CAediting_125803 | chr1_179974978_+ | SINE | Alu | AluJr4 |
CAediting_125804 | chr1_179976571_+ | SINE | Alu | AluYc |
CAediting_125805 | chr1_179981759_+ | SINE | Alu | AluJb |
CAediting_125806 | chr1_179994728_+ | SINE | Alu | AluJo |
CAediting_125807 | chr1_179997299_+ | SINE | Alu | AluY |
CAediting_125808 | chr1_179997325_+ | SINE | Alu | AluY |
CAediting_125809 | chr1_179997338_+ | SINE | Alu | AluY |
CAediting_125810 | chr1_179997353_+ | SINE | Alu | AluY |
CAediting_125811 | chr1_179997354_+ | SINE | Alu | AluY |
CAediting_125812 | chr1_179997356_+ | SINE | Alu | AluY |
CAediting_125813 | chr1_179997362_+ | SINE | Alu | AluY |
CAediting_125814 | chr1_179997363_+ | SINE | Alu | AluY |
CAediting_125815 | chr1_179997364_+ | SINE | Alu | AluY |
CAediting_125816 | chr1_179997393_+ | SINE | Alu | AluY |
CAediting_125817 | chr1_179997396_+ | SINE | Alu | AluY |
CAediting_125818 | chr1_179997420_+ | SINE | Alu | AluY |
CAediting_125819 | chr1_179997422_+ | SINE | Alu | AluY |
CAediting_125820 | chr1_179997428_+ | SINE | Alu | AluY |
CAediting_125821 | chr1_179997482_+ | SINE | Alu | AluY |
CAediting_125822 | chr1_179998503_+ | SINE | Alu | AluSx1 |
CAediting_125823 | chr1_180001265_+ | SINE | Alu | AluSz6 |
CAediting_125824 | chr1_180001521_+ | SINE | Alu | AluSz6 |
CAediting_125825 | chr1_180001541_+ | SINE | Alu | AluSz6 |
CAediting_125826 | chr1_180002240_+ | SINE | Alu | AluSz |
CAediting_125827 | chr1_180002264_+ | SINE | Alu | AluSz |
CAediting_125828 | chr1_180002273_+ | SINE | Alu | AluSz |
CAediting_125829 | chr1_180002275_+ | SINE | Alu | AluSz |
CAediting_125830 | chr1_180002278_+ | SINE | Alu | AluSz |
CAediting_125831 | chr1_180002279_+ | SINE | Alu | AluSz |
CAediting_125832 | chr1_180002309_+ | SINE | Alu | AluSz |
CAediting_125833 | chr1_180002310_+ | SINE | Alu | AluSz |
CAediting_125834 | chr1_180002315_+ | SINE | Alu | AluSz |
CAediting_125835 | chr1_180002316_+ | SINE | Alu | AluSz |
CAediting_125836 | chr1_180002318_+ | SINE | Alu | AluSz |
CAediting_125837 | chr1_180002321_+ | SINE | Alu | AluSz |
CAediting_125838 | chr1_180002322_+ | SINE | Alu | AluSz |
CAediting_125839 | chr1_180002324_+ | SINE | Alu | AluSz |
CAediting_125840 | chr1_180002327_+ | SINE | Alu | AluSz |
CAediting_125841 | chr1_180002334_+ | SINE | Alu | AluSz |
CAediting_125842 | chr1_180002335_+ | SINE | Alu | AluSz |
CAediting_125843 | chr1_180002384_+ | SINE | Alu | AluSz |
CAediting_125844 | chr1_180002394_+ | SINE | Alu | AluSz |
CAediting_125845 | chr1_180002395_+ | SINE | Alu | AluSz |
CAediting_125846 | chr1_180002399_+ | SINE | Alu | AluSz |
CAediting_125847 | chr1_180002469_+ | SINE | Alu | AluSz |
CAediting_125848 | chr1_180026074_+ | SINE | Alu | AluSx1 |
CAediting_125849 | chr1_180026098_+ | SINE | Alu | AluSx1 |
CAediting_125850 | chr1_180027398_+ | SINE | Alu | AluJb |
CAediting_125851 | chr1_180027511_+ | SINE | Alu | AluJb |
CAediting_125852 | chr1_180027530_+ | SINE | Alu | AluJb |
CAediting_125853 | chr1_180027587_+ | SINE | Alu | AluJb |
CAediting_125854 | chr1_180027590_+ | SINE | Alu | AluJb |
CAediting_125855 | chr1_180027605_+ | SINE | Alu | AluJb |
CAediting_125856 | chr1_180028521_+ | SINE | Alu | AluJb |
CAediting_125857 | chr1_180028535_+ | SINE | Alu | AluJb |
CAediting_125858 | chr1_180028643_+ | SINE | Alu | AluJb |
CAediting_125859 | chr1_180028644_+ | SINE | Alu | AluJb |
CAediting_125860 | chr1_180028645_+ | SINE | Alu | AluJb |
CAediting_125861 | chr1_180028646_+ | SINE | Alu | AluJb |
CAediting_125862 | chr1_180028786_+ | SINE | Alu | AluJb |
CAediting_125863 | chr1_180048969_+ | SINE | Alu | AluJr4 |
CAediting_125864 | chr1_180050416_+ | SINE | Alu | AluSq |
CAediting_125865 | chr1_180050613_+ | SINE | Alu | AluSq |
CAediting_125866 | chr1_180056671_+ | SINE | Alu | AluJb |
CAediting_125867 | chr1_180060464_+ | SINE | Alu | AluJr |
CAediting_125868 | chr1_180060534_+ | SINE | Alu | AluJr |
CAediting_125869 | chr1_180060565_+ | SINE | Alu | AluJr |
CAediting_125870 | chr1_180060570_+ | SINE | Alu | AluJr |
CAediting_125871 | chr1_180063738_+ | SINE | Alu | AluJb |
CAediting_125872 | chr1_180063757_+ | SINE | Alu | AluJb |
CAediting_125873 | chr1_180063800_+ | SINE | Alu | AluJb |
CAediting_125874 | chr1_180065576_+ | SINE | Alu | AluJo |
CAediting_125875 | chr1_180069023_+ | SINE | Alu | FLAM_A |
CAediting_125876 | chr1_180071228_+ | SINE | Alu | AluSq2 |
CAediting_125877 | chr1_180071352_+ | SINE | Alu | AluSq2 |
CAediting_125878 | chr1_180071353_+ | SINE | Alu | AluSq2 |
CAediting_125879 | chr1_180084482_+ | SINE | Alu | AluY |
CAediting_125880 | chr1_180084746_+ | SINE | Alu | AluJr |
CAediting_125881 | chr1_180084862_+ | SINE | Alu | AluJr |
CAediting_125882 | chr1_180091602_+ | SINE | Alu | AluJb |
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RNA A-to-I editing events in the alternative splicing sites for CEP350 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEP350 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for CEP350 |
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The effects of the RNA editing to the miRNA binding sites for CEP350 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000135837.14 | ENST00000429851 | hsa-miR-200b-3p | 180112433 | 180112439 | 7mer-m8 | 180112419 | 180112440 | 147 | -14.54 |
CAediting_393 | chr1_1167164_+ | ENSG00000135837.14 | ENST00000429851 | hsa-miR-200b-3p | 180112991 | 180112997 | 7mer-m8 | 180112977 | 180112998 | 143 | -12.02 |
CAediting_393 | chr1_1167164_+ | ENSG00000135837.14 | ENST00000417046 | hsa-miR-200b-3p | 180112991 | 180112997 | 7mer-m8 | 180112977 | 180112998 | 143 | -12.02 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000135837.14 | ENST00000429851 | hsa-miR-548aa | 180112548 | 180112554 | 7mer-m8 | 180112529 | 180112555 | 142 | -8.29 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000135837.14 | ENST00000417046 | hsa-miR-548aa | 180112548 | 180112554 | 7mer-m8 | 180112529 | 180112555 | 142 | -8.29 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_442554 | chr5_154685830_+ | ENSG00000135837.14 | ENST00000429851 | hsa-miR-1303 | 180111589 | 180111596 | 8mer-1a | 180111575 | 180111596 | 145 | -15.7 |
CAediting_393 | chr1_1167164_+ | ENSG00000135837.14 | ENST00000429851 | hsa-miR-200b-3p | 180111597 | 180111604 | 8mer-1a | 180111583 | 180111604 | 152 | -11.6 |
CAediting_228905 | chr2_188297554_+ | ENSG00000135837.14 | ENST00000429851 | hsa-miR-561-3p | 180113228 | 180113235 | 8mer-1a | 180113213 | 180113235 | 155 | -8.3 |
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The effects of the RNA editing to the stability of the RNA structures for CEP350 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CEP350 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for CEP350 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
STAD | pathologic_stage | CAediting_125811 | chr1_179997354_+ | 0.0414618569655833 | 0.247971861095381 |
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Relation with survival for CEP350 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for CEP350 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CEP350 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |