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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: IST1 (CAeditome ID:9798)

Gene summary for IST1

check button Gene summary
Gene informationGene symbol

IST1

Gene ID

9798

Gene nameIST1 factor associated with ESCRT-III
SynonymsCHMP8|OLC1
Cytomap

16q22.2

Type of geneprotein-coding
DescriptionIST1 homologIST1, ESCRT-III associated factorIST1, endosomal sorting complex required for transport-III componentincreased sodium tolerance 1 homologoverexpressed in lung cancer 1putative MAPK-activating protein PM28
Modification date20210518
UniProtAcc

P53990

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
IST1

GO:0000785

IST1 homolog

28242692

IST1

GO:0044877

IST1 homolog

19129479

IST1

GO:0009838

IST1 homolog

19129479

IST1

GO:0009838

IST1 homolog

19129480

IST1

GO:0019076

IST1 homolog

19129479

IST1

GO:0045862

IST1 homolog

20849418

IST1

GO:0046745

IST1 homolog

19129479

IST1

GO:0005793

IST1 homolog

10942595

IST1

GO:0005813

IST1 homolog

19129479

IST1

GO:0005813

IST1 homolog

20719964

IST1

GO:0005829

IST1 homolog

19129480

IST1

GO:0030496

IST1 homolog

19129479

IST1

GO:0030496

IST1 homolog

20719964

IST1

GO:0043231

IST1 homolog

0000052

IST1

GO:0090543

IST1 homolog

19129479


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RNA A-to-I events for IST1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000182149.19
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1131241(71896702, +), CAediting_1131242(71896747, +), CAediting_1131243(71896760, +), CAediting_1131244(71896765, +), CAediting_1131245(71896802, +), CAediting_1131246(71896803, +), CAediting_1131247(71896821, +), CAediting_1131248(71896874, +), CAediting_1131249(71896888, +), CAediting_1131250(71896907, +), CAediting_1131251(71896929, +), CAediting_1131252(71897078, +), CAediting_1131253(71897099, +), CAediting_1131254(71897113, +), CAediting_1131255(71897726, +), CAediting_1131256(71898111, +), CAediting_1131257(71898160, +), CAediting_1131258(71898165, +), CAediting_1131259(71898429, +), CAediting_1131260(71898469, +), CAediting_1131261(71898482, +), CAediting_1131262(71898497, +), CAediting_1131263(71898498, +), CAediting_1131264(71898500, +), CAediting_1131265(71898528, +), CAediting_1131266(71898531, +), CAediting_1131267(71898532, +), CAediting_1131268(71898533, +), CAediting_1131269(71898537, +), CAediting_1131270(71898545, +), CAediting_1131271(71898583, +), CAediting_1131272(71898598, +), CAediting_1131273(71898602, +), CAediting_1131274(71898701, +), CAediting_1131275(71898715, +), CAediting_1131276(71898724, +), CAediting_1131277(71898729, +), CAediting_1131278(71898793, +), CAediting_1131279(71898801, +), CAediting_1131280(71898854, +), CAediting_1131281(71898885, +), CAediting_1131282(71898886, +), CAediting_1131283(71898890, +), CAediting_1131284(71899301, +), CAediting_1131285(71899621, +), CAediting_1131286(71899689, +), CAediting_1131287(71899690, +), CAediting_1131288(71899711, +), CAediting_1131289(71899720, +), CAediting_1131290(71899760, +), CAediting_1131291(71899768, +), CAediting_1131292(71899769, +), CAediting_1131293(71899873, +), CAediting_1131294(71899876, +), CAediting_1131295(71899884, +), CAediting_1131296(71899947, +), CAediting_1131297(71900014, +), CAediting_1131298(71900019, +), CAediting_1131299(71900039, +), CAediting_1131300(71900045, +), CAediting_1131301(71900046, +), CAediting_1131302(71900055, +), CAediting_1131303(71900072, +), CAediting_1131304(71900077, +), CAediting_1131305(71900078, +), CAediting_1131306(71900094, +), CAediting_1131307(71900117, +), CAediting_1131308(71901275, +), CAediting_1131309(71901353, +), CAediting_1131310(71901420, +), CAediting_1131311(71902467, +), CAediting_1131312(71902505, +), CAediting_1131313(71902508, +), CAediting_1131314(71903011, +), CAediting_1131315(71903013, +), CAediting_1131316(71903036, +), CAediting_1131317(71903058, +), CAediting_1131318(71903242, +), CAediting_1131319(71904263, +), CAediting_1131320(71904332, +), CAediting_1131321(71904345, +), CAediting_1131322(71904436, +), CAediting_1131323(71904586, +), CAediting_1131324(71904661, +), CAediting_1131325(71906133, +), CAediting_1131326(71906210, +), CAediting_1131327(71906909, +), CAediting_1131328(71906978, +), CAediting_1131329(71909237, +), CAediting_1131330(71909247, +), CAediting_1131331(71909249, +), CAediting_1131332(71910329, +), CAediting_1131333(71910344, +), CAediting_1131334(71910351, +), CAediting_1131335(71910352, +), CAediting_1131336(71910357, +), CAediting_1131337(71910378, +), CAediting_1131338(71910419, +), CAediting_1131339(71910421, +), CAediting_1131340(71910449, +), CAediting_1131341(71910459, +), CAediting_1131342(71910512, +), CAediting_1131343(71911020, +), CAediting_1131344(71911038, +), CAediting_1131345(71911063, +), CAediting_1131346(71911147, +), CAediting_1131347(71911160, +), CAediting_1131348(71911161, +), CAediting_1131349(71911412, +), CAediting_1131350(71911413, +), CAediting_1131351(71911454, +), CAediting_1131352(71911516, +), CAediting_1131353(71911791, +), CAediting_1131354(71911846, +), CAediting_1131355(71923384, +), CAediting_1131356(71924354, +), CAediting_1131357(71924355, +), CAediting_1131358(71924390, +), CAediting_1131359(71924405, +), CAediting_1131360(71924426, +), CAediting_1131361(71924430, +), CAediting_1131362(71924431, +), CAediting_1131363(71924432, +), CAediting_1131364(71924433, +), CAediting_1131365(71924435, +), CAediting_1131366(71924441, +), CAediting_1131367(71924452, +), CAediting_1131368(71924454, +), CAediting_1131369(71924516, +), CAediting_1131370(71924519, +), CAediting_1131371(71924520, +), CAediting_1131372(71924573, +), CAediting_1131373(71925087, +), CAediting_1131374(71925093, +), CAediting_1131375(71925142, +), CAediting_1131376(71925152, +), CAediting_1131377(71925220, +), CAediting_1131378(71925277, +), CAediting_1131379(71925289, +), CAediting_1131380(71925295, +), CAediting_1131381(71925396, +), CAediting_1131382(71925397, +), CAediting_1131383(71925416, +), CAediting_1131384(71925445, +), CAediting_1131385(71925481, +), CAediting_1131386(71925482, +), CAediting_1131387(71925496, +), CAediting_1131388(71925499, +), CAediting_1131389(71925513, +), CAediting_1131390(71925545, +), CAediting_1131391(71925575, +), CAediting_1131392(71925576, +), CAediting_1131393(71925583, +), CAediting_1131394(71925588, +), CAediting_1131395(71925597, +), CAediting_1131396(71925680, +), CAediting_1131397(71925696, +), CAediting_1131398(71925702, +), CAediting_1131399(71925703, +), CAediting_1131400(71925707, +), CAediting_1131401(71925708, +), CAediting_1131402(71925711, +), CAediting_1131403(71925720, +), CAediting_1131404(71925729, +), CAediting_1131405(71925732, +), CAediting_1131406(71925790, +), CAediting_1131407(71925828, +), CAediting_1131408(71925848, +), CAediting_1131409(71925849, +), CAediting_1131410(71925866, +), CAediting_1131411(71925880, +), CAediting_1131412(71925916, +), CAediting_1131413(71925917, +), CAediting_1131414(71926018, +), CAediting_1131415(71926026, +), CAediting_1131416(71926027, +), CAediting_1131417(71926032, +), CAediting_1131418(71926057, +), CAediting_1131419(71926081, +), CAediting_1131420(71926083, +), CAediting_1131421(71926095, +), CAediting_1131422(71926098, +), CAediting_1131423(71926104, +), CAediting_1131424(71926105, +), CAediting_1131425(71926117, +), CAediting_1131426(71926120, +), CAediting_1131427(71926121, +), CAediting_1131428(71926135, +), CAediting_1131429(71926161, +), CAediting_1131430(71926162, +), CAediting_1131431(71926167, +), CAediting_1131432(71926171, +), CAediting_1131433(71926179, +), CAediting_1131434(71926188, +), CAediting_1131435(71926203, +), CAediting_1131436(71926227, +), CAediting_1131437(71926228, +), CAediting_1131438(71926231, +), CAediting_1131439(71926365, +), CAediting_1131440(71926395, +), CAediting_1131441(71926399, +), CAediting_1131442(71926408, +), CAediting_1131443(71926418, +), CAediting_1131444(71926424, +), CAediting_1131445(71926430, +), CAediting_1131446(71926461, +), CAediting_1131447(71926470, +), CAediting_1131448(71926473, +), CAediting_1131449(71926485, +), CAediting_1131450(71926528, +), CAediting_1131451(71926531, +), CAediting_1131452(71926545, +), CAediting_1131453(71926548, +), CAediting_1131454(71926553, +), CAediting_1131455(71926557, +), CAediting_1131456(71926569, +), CAediting_1131457(71926585, +), CAediting_1131458(71926606, +), CAediting_1131459(71926607, +), CAediting_1131460(71926608, +), CAediting_1131461(71926620, +), CAediting_1131462(71926629, +), CAediting_1131463(71926636, +), CAediting_1131464(71927222, +), CAediting_1131465(71927236, +), CAediting_1131466(71927238, +), CAediting_1131467(71927244, +), CAediting_1131468(71927289, +), CAediting_1131469(71927296, +), CAediting_1131470(71927302, +), CAediting_1131471(71927303, +), CAediting_1131472(71927313, +), CAediting_1131473(71927324, +), CAediting_1131474(71927327, +), CAediting_1131475(71927328, +), CAediting_1131476(71927333, +), CAediting_1131477(71927336, +), CAediting_1131478(71927337, +), CAediting_1131479(71927338, +), CAediting_1131480(71927342, +), CAediting_1131481(71927346, +), CAediting_1131482(71927358, +), CAediting_1131483(71927368, +), CAediting_1131484(71927369, +), CAediting_1131485(71927410, +), CAediting_1131486(71927414, +), CAediting_1131487(71927429, +), CAediting_1131488(71927443, +),

Top

RNA editing positional annotations for IST1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1131241chr16_71896702_+ncRNA_intronic
CAediting_1131242chr16_71896747_+ncRNA_intronic
CAediting_1131243chr16_71896760_+ncRNA_intronic
CAediting_1131244chr16_71896765_+ncRNA_intronic
CAediting_1131245chr16_71896802_+ncRNA_intronic
CAediting_1131246chr16_71896803_+ncRNA_intronic
CAediting_1131247chr16_71896821_+ncRNA_intronic
CAediting_1131248chr16_71896874_+ncRNA_intronic
CAediting_1131249chr16_71896888_+ncRNA_intronic
CAediting_1131250chr16_71896907_+ncRNA_intronic
CAediting_1131251chr16_71896929_+ncRNA_intronic
CAediting_1131252chr16_71897078_+ncRNA_intronic
CAediting_1131253chr16_71897099_+ncRNA_intronic
CAediting_1131254chr16_71897113_+ncRNA_intronic
CAediting_1131255chr16_71897726_+ncRNA_intronic
CAediting_1131256chr16_71898111_+ncRNA_intronic
CAediting_1131257chr16_71898160_+ncRNA_intronic
CAediting_1131258chr16_71898165_+ncRNA_intronic
CAediting_1131259chr16_71898429_+ncRNA_intronic
CAediting_1131260chr16_71898469_+ncRNA_intronic
CAediting_1131261chr16_71898482_+ncRNA_intronic
CAediting_1131262chr16_71898497_+ncRNA_intronic
CAediting_1131263chr16_71898498_+ncRNA_intronic
CAediting_1131264chr16_71898500_+ncRNA_intronic
CAediting_1131265chr16_71898528_+ncRNA_intronic
CAediting_1131266chr16_71898531_+ncRNA_intronic
CAediting_1131267chr16_71898532_+ncRNA_intronic
CAediting_1131268chr16_71898533_+ncRNA_intronic
CAediting_1131269chr16_71898537_+ncRNA_intronic
CAediting_1131270chr16_71898545_+ncRNA_intronic
CAediting_1131271chr16_71898583_+ncRNA_intronic
CAediting_1131272chr16_71898598_+ncRNA_intronic
CAediting_1131273chr16_71898602_+ncRNA_intronic
CAediting_1131274chr16_71898701_+ncRNA_intronic
CAediting_1131275chr16_71898715_+ncRNA_intronic
CAediting_1131276chr16_71898724_+ncRNA_intronic
CAediting_1131277chr16_71898729_+ncRNA_intronic
CAediting_1131278chr16_71898793_+ncRNA_intronic
CAediting_1131279chr16_71898801_+ncRNA_intronic
CAediting_1131280chr16_71898854_+ncRNA_intronic
CAediting_1131281chr16_71898885_+ncRNA_intronic
CAediting_1131282chr16_71898886_+ncRNA_intronic
CAediting_1131283chr16_71898890_+ncRNA_intronic
CAediting_1131284chr16_71899301_+ncRNA_intronic
CAediting_1131285chr16_71899621_+ncRNA_intronic
CAediting_1131286chr16_71899689_+ncRNA_intronic
CAediting_1131287chr16_71899690_+ncRNA_intronic
CAediting_1131288chr16_71899711_+ncRNA_intronic
CAediting_1131289chr16_71899720_+ncRNA_intronic
CAediting_1131290chr16_71899760_+ncRNA_intronic
CAediting_1131291chr16_71899768_+ncRNA_intronic
CAediting_1131292chr16_71899769_+ncRNA_intronic
CAediting_1131293chr16_71899873_+ncRNA_intronic
CAediting_1131294chr16_71899876_+ncRNA_intronic
CAediting_1131295chr16_71899884_+ncRNA_intronic
CAediting_1131296chr16_71899947_+ncRNA_intronic
CAediting_1131297chr16_71900014_+ncRNA_intronic
CAediting_1131298chr16_71900019_+ncRNA_intronic
CAediting_1131299chr16_71900039_+ncRNA_intronic
CAediting_1131300chr16_71900045_+ncRNA_intronic
CAediting_1131301chr16_71900046_+ncRNA_intronic
CAediting_1131302chr16_71900055_+ncRNA_intronic
CAediting_1131303chr16_71900072_+ncRNA_intronic
CAediting_1131304chr16_71900077_+ncRNA_intronic
CAediting_1131305chr16_71900078_+ncRNA_intronic
CAediting_1131306chr16_71900094_+ncRNA_intronic
CAediting_1131307chr16_71900117_+ncRNA_intronic
CAediting_1131308chr16_71901275_+ncRNA_intronic
CAediting_1131309chr16_71901353_+ncRNA_intronic
CAediting_1131310chr16_71901420_+ncRNA_intronic
CAediting_1131311chr16_71902467_+ncRNA_intronic
CAediting_1131312chr16_71902505_+ncRNA_intronic
CAediting_1131313chr16_71902508_+ncRNA_intronic
CAediting_1131314chr16_71903011_+ncRNA_intronic
CAediting_1131315chr16_71903013_+ncRNA_intronic
CAediting_1131316chr16_71903036_+ncRNA_intronic
CAediting_1131317chr16_71903058_+ncRNA_intronic
CAediting_1131318chr16_71903242_+ncRNA_intronic
CAediting_1131319chr16_71904263_+ncRNA_intronic
CAediting_1131320chr16_71904332_+ncRNA_intronic
CAediting_1131321chr16_71904345_+ncRNA_intronic
CAediting_1131322chr16_71904436_+ncRNA_intronic
CAediting_1131323chr16_71904586_+ncRNA_intronic
CAediting_1131324chr16_71904661_+ncRNA_intronic
CAediting_1131325chr16_71906133_+ncRNA_intronic
CAediting_1131326chr16_71906210_+ncRNA_intronic
CAediting_1131327chr16_71906909_+ncRNA_intronic
CAediting_1131328chr16_71906978_+ncRNA_intronic
CAediting_1131329chr16_71909237_+ncRNA_intronic
CAediting_1131330chr16_71909247_+ncRNA_intronic
CAediting_1131331chr16_71909249_+ncRNA_intronic
CAediting_1131332chr16_71910329_+ncRNA_intronic
CAediting_1131333chr16_71910344_+ncRNA_intronic
CAediting_1131334chr16_71910351_+ncRNA_intronic
CAediting_1131335chr16_71910352_+ncRNA_intronic
CAediting_1131336chr16_71910357_+ncRNA_intronic
CAediting_1131337chr16_71910378_+ncRNA_intronic
CAediting_1131338chr16_71910419_+ncRNA_intronic
CAediting_1131339chr16_71910421_+ncRNA_intronic
CAediting_1131340chr16_71910449_+ncRNA_intronic
CAediting_1131341chr16_71910459_+ncRNA_intronic
CAediting_1131342chr16_71910512_+ncRNA_intronic
CAediting_1131343chr16_71911020_+ncRNA_intronic
CAediting_1131344chr16_71911038_+ncRNA_intronic
CAediting_1131345chr16_71911063_+ncRNA_intronic
CAediting_1131346chr16_71911147_+ncRNA_intronic
CAediting_1131347chr16_71911160_+ncRNA_intronic
CAediting_1131348chr16_71911161_+ncRNA_intronic
CAediting_1131349chr16_71911412_+ncRNA_intronic
CAediting_1131350chr16_71911413_+ncRNA_intronic
CAediting_1131351chr16_71911454_+ncRNA_intronic
CAediting_1131352chr16_71911516_+ncRNA_intronic
CAediting_1131353chr16_71911791_+ncRNA_intronic
CAediting_1131354chr16_71911846_+ncRNA_intronic
CAediting_1131355chr16_71923384_+exonic
CAediting_1131356chr16_71924354_+ncRNA_intronic
CAediting_1131357chr16_71924355_+ncRNA_intronic
CAediting_1131358chr16_71924390_+ncRNA_intronic
CAediting_1131359chr16_71924405_+ncRNA_intronic
CAediting_1131360chr16_71924426_+ncRNA_exonic
CAediting_1131361chr16_71924430_+ncRNA_exonic
CAediting_1131362chr16_71924431_+ncRNA_exonic
CAediting_1131363chr16_71924432_+ncRNA_exonic
CAediting_1131364chr16_71924433_+ncRNA_exonic
CAediting_1131365chr16_71924435_+ncRNA_exonic
CAediting_1131366chr16_71924441_+ncRNA_exonic
CAediting_1131367chr16_71924452_+ncRNA_exonic
CAediting_1131368chr16_71924454_+ncRNA_exonic
CAediting_1131369chr16_71924516_+ncRNA_exonic
CAediting_1131370chr16_71924519_+ncRNA_exonic
CAediting_1131371chr16_71924520_+ncRNA_exonic
CAediting_1131372chr16_71924573_+ncRNA_exonic
CAediting_1131373chr16_71925087_+ncRNA_intronic
CAediting_1131374chr16_71925093_+ncRNA_intronic
CAediting_1131375chr16_71925142_+ncRNA_intronic
CAediting_1131376chr16_71925152_+ncRNA_intronic
CAediting_1131377chr16_71925220_+ncRNA_intronic
CAediting_1131378chr16_71925277_+ncRNA_intronic
CAediting_1131379chr16_71925289_+ncRNA_intronic
CAediting_1131380chr16_71925295_+ncRNA_intronic
CAediting_1131381chr16_71925396_+ncRNA_intronic
CAediting_1131382chr16_71925397_+ncRNA_intronic
CAediting_1131383chr16_71925416_+ncRNA_intronic
CAediting_1131384chr16_71925445_+ncRNA_intronic
CAediting_1131385chr16_71925481_+ncRNA_intronic
CAediting_1131386chr16_71925482_+ncRNA_intronic
CAediting_1131387chr16_71925496_+ncRNA_intronic
CAediting_1131388chr16_71925499_+ncRNA_intronic
CAediting_1131389chr16_71925513_+ncRNA_intronic
CAediting_1131390chr16_71925545_+ncRNA_intronic
CAediting_1131391chr16_71925575_+ncRNA_intronic
CAediting_1131392chr16_71925576_+ncRNA_intronic
CAediting_1131393chr16_71925583_+ncRNA_intronic
CAediting_1131394chr16_71925588_+ncRNA_intronic
CAediting_1131395chr16_71925597_+ncRNA_intronic
CAediting_1131396chr16_71925680_+ncRNA_intronic
CAediting_1131397chr16_71925696_+ncRNA_intronic
CAediting_1131398chr16_71925702_+ncRNA_intronic
CAediting_1131399chr16_71925703_+ncRNA_intronic
CAediting_1131400chr16_71925707_+ncRNA_intronic
CAediting_1131401chr16_71925708_+ncRNA_intronic
CAediting_1131402chr16_71925711_+ncRNA_intronic
CAediting_1131403chr16_71925720_+ncRNA_intronic
CAediting_1131404chr16_71925729_+ncRNA_intronic
CAediting_1131405chr16_71925732_+ncRNA_intronic
CAediting_1131406chr16_71925790_+ncRNA_intronic
CAediting_1131407chr16_71925828_+ncRNA_intronic
CAediting_1131408chr16_71925848_+ncRNA_intronic
CAediting_1131409chr16_71925849_+ncRNA_intronic
CAediting_1131410chr16_71925866_+ncRNA_intronic
CAediting_1131411chr16_71925880_+ncRNA_intronic
CAediting_1131412chr16_71925916_+ncRNA_intronic
CAediting_1131413chr16_71925917_+ncRNA_intronic
CAediting_1131414chr16_71926018_+ncRNA_intronic
CAediting_1131415chr16_71926026_+ncRNA_intronic
CAediting_1131416chr16_71926027_+ncRNA_intronic
CAediting_1131417chr16_71926032_+ncRNA_intronic
CAediting_1131418chr16_71926057_+ncRNA_intronic
CAediting_1131419chr16_71926081_+ncRNA_intronic
CAediting_1131420chr16_71926083_+ncRNA_intronic
CAediting_1131421chr16_71926095_+ncRNA_intronic
CAediting_1131422chr16_71926098_+ncRNA_intronic
CAediting_1131423chr16_71926104_+ncRNA_intronic
CAediting_1131424chr16_71926105_+ncRNA_intronic
CAediting_1131425chr16_71926117_+ncRNA_intronic
CAediting_1131426chr16_71926120_+ncRNA_intronic
CAediting_1131427chr16_71926121_+ncRNA_intronic
CAediting_1131428chr16_71926135_+ncRNA_intronic
CAediting_1131429chr16_71926161_+ncRNA_intronic
CAediting_1131430chr16_71926162_+ncRNA_intronic
CAediting_1131431chr16_71926167_+ncRNA_intronic
CAediting_1131432chr16_71926171_+ncRNA_intronic
CAediting_1131433chr16_71926179_+ncRNA_intronic
CAediting_1131434chr16_71926188_+ncRNA_intronic
CAediting_1131435chr16_71926203_+ncRNA_intronic
CAediting_1131436chr16_71926227_+ncRNA_intronic
CAediting_1131437chr16_71926228_+ncRNA_intronic
CAediting_1131438chr16_71926231_+ncRNA_intronic
CAediting_1131439chr16_71926365_+ncRNA_intronic
CAediting_1131440chr16_71926395_+ncRNA_intronic
CAediting_1131441chr16_71926399_+ncRNA_intronic
CAediting_1131442chr16_71926408_+ncRNA_intronic
CAediting_1131443chr16_71926418_+ncRNA_intronic
CAediting_1131444chr16_71926424_+ncRNA_intronic
CAediting_1131445chr16_71926430_+ncRNA_intronic
CAediting_1131446chr16_71926461_+ncRNA_intronic
CAediting_1131447chr16_71926470_+ncRNA_intronic
CAediting_1131448chr16_71926473_+ncRNA_intronic
CAediting_1131449chr16_71926485_+ncRNA_intronic
CAediting_1131450chr16_71926528_+ncRNA_intronic
CAediting_1131451chr16_71926531_+ncRNA_intronic
CAediting_1131452chr16_71926545_+ncRNA_intronic
CAediting_1131453chr16_71926548_+ncRNA_intronic
CAediting_1131454chr16_71926553_+ncRNA_intronic
CAediting_1131455chr16_71926557_+ncRNA_intronic
CAediting_1131456chr16_71926569_+ncRNA_intronic
CAediting_1131457chr16_71926585_+ncRNA_intronic
CAediting_1131458chr16_71926606_+ncRNA_intronic
CAediting_1131459chr16_71926607_+ncRNA_intronic
CAediting_1131460chr16_71926608_+ncRNA_intronic
CAediting_1131461chr16_71926620_+ncRNA_intronic
CAediting_1131462chr16_71926629_+ncRNA_intronic
CAediting_1131463chr16_71926636_+ncRNA_intronic
CAediting_1131464chr16_71927222_+ncRNA_intronic
CAediting_1131465chr16_71927236_+ncRNA_intronic
CAediting_1131466chr16_71927238_+ncRNA_intronic
CAediting_1131467chr16_71927244_+ncRNA_intronic
CAediting_1131468chr16_71927289_+ncRNA_intronic
CAediting_1131469chr16_71927296_+ncRNA_intronic
CAediting_1131470chr16_71927302_+ncRNA_intronic
CAediting_1131471chr16_71927303_+ncRNA_intronic
CAediting_1131472chr16_71927313_+ncRNA_intronic
CAediting_1131473chr16_71927324_+ncRNA_intronic
CAediting_1131474chr16_71927327_+ncRNA_intronic
CAediting_1131475chr16_71927328_+ncRNA_intronic
CAediting_1131476chr16_71927333_+ncRNA_intronic
CAediting_1131477chr16_71927336_+ncRNA_intronic
CAediting_1131478chr16_71927337_+ncRNA_intronic
CAediting_1131479chr16_71927338_+ncRNA_intronic
CAediting_1131480chr16_71927342_+ncRNA_intronic
CAediting_1131481chr16_71927346_+ncRNA_intronic
CAediting_1131482chr16_71927358_+ncRNA_intronic
CAediting_1131483chr16_71927368_+ncRNA_intronic
CAediting_1131484chr16_71927369_+ncRNA_intronic
CAediting_1131485chr16_71927410_+ncRNA_intronic
CAediting_1131486chr16_71927414_+ncRNA_intronic
CAediting_1131487chr16_71927429_+ncRNA_intronic
CAediting_1131488chr16_71927443_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1131241chr16_71896702_+SINEAluAluJb
CAediting_1131242chr16_71896747_+SINEAluAluJb
CAediting_1131243chr16_71896760_+SINEAluAluJb
CAediting_1131244chr16_71896765_+SINEAluAluJb
CAediting_1131245chr16_71896802_+SINEAluAluJb
CAediting_1131246chr16_71896803_+SINEAluAluJb
CAediting_1131247chr16_71896821_+SINEAluAluJb
CAediting_1131248chr16_71896874_+SINEAluAluJb
CAediting_1131249chr16_71896888_+SINEAluAluJb
CAediting_1131250chr16_71896907_+SINEAluAluJb
CAediting_1131251chr16_71896929_+SINEAluAluJb
CAediting_1131252chr16_71897078_+SINEAluAluJb
CAediting_1131253chr16_71897099_+SINEAluAluJb
CAediting_1131254chr16_71897113_+SINEAluAluJb
CAediting_1131255chr16_71897726_+SINEAluAluSx
CAediting_1131256chr16_71898111_+SINEAluAluSx1
CAediting_1131257chr16_71898160_+SINEAluAluSx1
CAediting_1131258chr16_71898165_+SINEAluAluSx1
CAediting_1131259chr16_71898429_+SINEAluAluSx1
CAediting_1131260chr16_71898469_+SINEAluAluSx1
CAediting_1131261chr16_71898482_+SINEAluAluSx1
CAediting_1131262chr16_71898497_+SINEAluAluSx1
CAediting_1131263chr16_71898498_+SINEAluAluSx1
CAediting_1131264chr16_71898500_+SINEAluAluSx1
CAediting_1131265chr16_71898528_+SINEAluAluSx1
CAediting_1131266chr16_71898531_+SINEAluAluSx1
CAediting_1131267chr16_71898532_+SINEAluAluSx1
CAediting_1131268chr16_71898533_+SINEAluAluSx1
CAediting_1131269chr16_71898537_+SINEAluAluSx1
CAediting_1131270chr16_71898545_+SINEAluAluSx1
CAediting_1131271chr16_71898583_+SINEAluAluSx1
CAediting_1131272chr16_71898598_+SINEAluAluSx1
CAediting_1131273chr16_71898602_+SINEAluAluSx1
CAediting_1131274chr16_71898701_+SINEAluAluSg
CAediting_1131275chr16_71898715_+SINEAluAluSg
CAediting_1131276chr16_71898724_+SINEAluAluSg
CAediting_1131277chr16_71898729_+SINEAluAluSg
CAediting_1131278chr16_71898793_+SINEAluAluSg
CAediting_1131279chr16_71898801_+SINEAluAluSg
CAediting_1131280chr16_71898854_+SINEAluAluSg
CAediting_1131281chr16_71898885_+SINEAluAluSg
CAediting_1131282chr16_71898886_+SINEAluAluSg
CAediting_1131283chr16_71898890_+SINEAluAluSg
CAediting_1131284chr16_71899301_+SINEAluFLAM_C
CAediting_1131285chr16_71899621_+SINEAluAluSq2
CAediting_1131286chr16_71899689_+SINEAluAluSq2
CAediting_1131287chr16_71899690_+SINEAluAluSq2
CAediting_1131288chr16_71899711_+SINEAluAluSq2
CAediting_1131289chr16_71899720_+SINEAluAluSq2
CAediting_1131290chr16_71899760_+SINEAluAluY
CAediting_1131291chr16_71899768_+SINEAluAluY
CAediting_1131292chr16_71899769_+SINEAluAluY
CAediting_1131293chr16_71899873_+SINEAluAluY
CAediting_1131294chr16_71899876_+SINEAluAluY
CAediting_1131295chr16_71899884_+SINEAluAluY
CAediting_1131296chr16_71899947_+SINEAluAluY
CAediting_1131297chr16_71900014_+SINEAluAluY
CAediting_1131298chr16_71900019_+SINEAluAluSq2
CAediting_1131299chr16_71900039_+SINEAluAluSq2
CAediting_1131300chr16_71900045_+SINEAluAluSq2
CAediting_1131301chr16_71900046_+SINEAluAluSq2
CAediting_1131302chr16_71900055_+SINEAluAluSq2
CAediting_1131303chr16_71900072_+SINEAluAluSq2
CAediting_1131304chr16_71900077_+SINEAluAluSq2
CAediting_1131305chr16_71900078_+SINEAluAluSq2
CAediting_1131306chr16_71900094_+SINEAluAluSq2
CAediting_1131307chr16_71900117_+SINEAluAluSq2
CAediting_1131308chr16_71901275_+SINEAluAluY
CAediting_1131309chr16_71901353_+SINEAluAluY
CAediting_1131310chr16_71901420_+SINEAluAluY
CAediting_1131311chr16_71902467_+SINEAluAluSx1
CAediting_1131312chr16_71902505_+SINEAluAluSx1
CAediting_1131313chr16_71902508_+SINEAluAluSx1
CAediting_1131314chr16_71903011_+SINEAluAluJr
CAediting_1131315chr16_71903013_+SINEAluAluJr
CAediting_1131316chr16_71903036_+SINEAluAluJr
CAediting_1131317chr16_71903058_+SINEAluAluJr
CAediting_1131318chr16_71903242_+SINEAluAluJr
CAediting_1131319chr16_71904263_+SINEAluAluSq
CAediting_1131320chr16_71904332_+SINEAluAluSq
CAediting_1131321chr16_71904345_+SINEAluAluSq
CAediting_1131322chr16_71904436_+SINEAluAluJr
CAediting_1131323chr16_71904586_+SINEAluAluJr
CAediting_1131324chr16_71904661_+SINEAluAluJr
CAediting_1131325chr16_71906133_+SINEAluAluSc8
CAediting_1131326chr16_71906210_+SINEAluAluSc8
CAediting_1131327chr16_71906909_+SINEAluAluSx3
CAediting_1131328chr16_71906978_+SINEAluAluSx3
CAediting_1131329chr16_71909237_+SINEAluAluJr4
CAediting_1131330chr16_71909247_+SINEAluAluJr4
CAediting_1131331chr16_71909249_+SINEAluAluJr4
CAediting_1131332chr16_71910329_+SINEAluAluYm1
CAediting_1131333chr16_71910344_+SINEAluAluYm1
CAediting_1131334chr16_71910351_+SINEAluAluYm1
CAediting_1131335chr16_71910352_+SINEAluAluYm1
CAediting_1131336chr16_71910357_+SINEAluAluYm1
CAediting_1131337chr16_71910378_+SINEAluAluYm1
CAediting_1131338chr16_71910419_+SINEAluAluYm1
CAediting_1131339chr16_71910421_+SINEAluAluYm1
CAediting_1131340chr16_71910449_+SINEAluAluYm1
CAediting_1131341chr16_71910459_+SINEAluAluYm1
CAediting_1131342chr16_71910512_+SINEAluAluYm1
CAediting_1131343chr16_71911020_+SINEAluAluSz
CAediting_1131344chr16_71911038_+SINEAluAluSz
CAediting_1131345chr16_71911063_+SINEAluAluSz
CAediting_1131346chr16_71911147_+SINEAluAluSz
CAediting_1131347chr16_71911160_+SINEAluAluSz
CAediting_1131348chr16_71911161_+SINEAluAluSz
CAediting_1131349chr16_71911412_+SINEAluAluSx
CAediting_1131350chr16_71911413_+SINEAluAluSx
CAediting_1131351chr16_71911454_+SINEAluAluSx
CAediting_1131352chr16_71911516_+SINEAluAluSx
CAediting_1131353chr16_71911791_+SINEAluAluJb
CAediting_1131354chr16_71911846_+SINEAluAluJb
CAediting_1131356chr16_71924354_+SINEAluAluJb
CAediting_1131357chr16_71924355_+SINEAluAluJb
CAediting_1131358chr16_71924390_+SINEAluAluJb
CAediting_1131359chr16_71924405_+SINEAluAluJb
CAediting_1131360chr16_71924426_+SINEAluAluJb
CAediting_1131361chr16_71924430_+SINEAluAluJb
CAediting_1131362chr16_71924431_+SINEAluAluJb
CAediting_1131363chr16_71924432_+SINEAluAluJb
CAediting_1131364chr16_71924433_+SINEAluAluJb
CAediting_1131365chr16_71924435_+SINEAluAluJb
CAediting_1131366chr16_71924441_+SINEAluAluJb
CAediting_1131367chr16_71924452_+SINEAluAluJb
CAediting_1131368chr16_71924454_+SINEAluAluJb
CAediting_1131369chr16_71924516_+SINEAluAluJb
CAediting_1131370chr16_71924519_+SINEAluAluJb
CAediting_1131371chr16_71924520_+SINEAluAluJb
CAediting_1131372chr16_71924573_+SINEAluAluJb
CAediting_1131373chr16_71925087_+SINEAluAluY
CAediting_1131374chr16_71925093_+SINEAluAluY
CAediting_1131375chr16_71925142_+SINEAluAluY
CAediting_1131376chr16_71925152_+SINEAluAluY
CAediting_1131377chr16_71925220_+SINEAluAluY
CAediting_1131378chr16_71925277_+SINEAluAluY
CAediting_1131379chr16_71925289_+SINEAluAluY
CAediting_1131380chr16_71925295_+SINEAluAluY
CAediting_1131381chr16_71925396_+SINEAluAluSg
CAediting_1131382chr16_71925397_+SINEAluAluSg
CAediting_1131383chr16_71925416_+SINEAluAluSg
CAediting_1131384chr16_71925445_+SINEAluAluSg
CAediting_1131385chr16_71925481_+SINEAluAluSg
CAediting_1131386chr16_71925482_+SINEAluAluSg
CAediting_1131387chr16_71925496_+SINEAluAluSg
CAediting_1131388chr16_71925499_+SINEAluAluSg
CAediting_1131389chr16_71925513_+SINEAluAluSg
CAediting_1131390chr16_71925545_+SINEAluAluSg
CAediting_1131391chr16_71925575_+SINEAluAluSg
CAediting_1131392chr16_71925576_+SINEAluAluSg
CAediting_1131393chr16_71925583_+SINEAluAluSg
CAediting_1131394chr16_71925588_+SINEAluAluSg
CAediting_1131395chr16_71925597_+SINEAluAluSg
CAediting_1131396chr16_71925680_+SINEAluAluJr4
CAediting_1131397chr16_71925696_+SINEAluAluJr4
CAediting_1131398chr16_71925702_+SINEAluAluJr4
CAediting_1131399chr16_71925703_+SINEAluAluJr4
CAediting_1131400chr16_71925707_+SINEAluAluJr4
CAediting_1131401chr16_71925708_+SINEAluAluJr4
CAediting_1131402chr16_71925711_+SINEAluAluJr4
CAediting_1131403chr16_71925720_+SINEAluAluJr4
CAediting_1131404chr16_71925729_+SINEAluAluJr4
CAediting_1131405chr16_71925732_+SINEAluAluJr4
CAediting_1131406chr16_71925790_+SINEAluAluJr4
CAediting_1131407chr16_71925828_+SINEAluAluJr4
CAediting_1131408chr16_71925848_+SINEAluAluJr4
CAediting_1131409chr16_71925849_+SINEAluAluJr4
CAediting_1131410chr16_71925866_+SINEAluAluJr4
CAediting_1131411chr16_71925880_+SINEAluAluJr4
CAediting_1131412chr16_71925916_+SINEAluAluJr4
CAediting_1131413chr16_71925917_+SINEAluAluJr4
CAediting_1131414chr16_71926018_+SINEAluAluSx1
CAediting_1131415chr16_71926026_+SINEAluAluSx1
CAediting_1131416chr16_71926027_+SINEAluAluSx1
CAediting_1131417chr16_71926032_+SINEAluAluSx1
CAediting_1131418chr16_71926057_+SINEAluAluSx1
CAediting_1131419chr16_71926081_+SINEAluAluSx1
CAediting_1131420chr16_71926083_+SINEAluAluSx1
CAediting_1131421chr16_71926095_+SINEAluAluSx1
CAediting_1131422chr16_71926098_+SINEAluAluSx1
CAediting_1131423chr16_71926104_+SINEAluAluSx1
CAediting_1131424chr16_71926105_+SINEAluAluSx1
CAediting_1131425chr16_71926117_+SINEAluAluSx1
CAediting_1131426chr16_71926120_+SINEAluAluSx1
CAediting_1131427chr16_71926121_+SINEAluAluSx1
CAediting_1131428chr16_71926135_+SINEAluAluSx1
CAediting_1131429chr16_71926161_+SINEAluAluSx1
CAediting_1131430chr16_71926162_+SINEAluAluSx1
CAediting_1131431chr16_71926167_+SINEAluAluSx1
CAediting_1131432chr16_71926171_+SINEAluAluSx1
CAediting_1131433chr16_71926179_+SINEAluAluSx1
CAediting_1131434chr16_71926188_+SINEAluAluSx1
CAediting_1131435chr16_71926203_+SINEAluAluSx1
CAediting_1131436chr16_71926227_+SINEAluAluSx1
CAediting_1131437chr16_71926228_+SINEAluAluSx1
CAediting_1131438chr16_71926231_+SINEAluAluSx1
CAediting_1131439chr16_71926365_+SINEAluAluY
CAediting_1131440chr16_71926395_+SINEAluAluY
CAediting_1131441chr16_71926399_+SINEAluAluY
CAediting_1131442chr16_71926408_+SINEAluAluY
CAediting_1131443chr16_71926418_+SINEAluAluY
CAediting_1131444chr16_71926424_+SINEAluAluY
CAediting_1131445chr16_71926430_+SINEAluAluY
CAediting_1131446chr16_71926461_+SINEAluAluY
CAediting_1131447chr16_71926470_+SINEAluAluY
CAediting_1131448chr16_71926473_+SINEAluAluY
CAediting_1131449chr16_71926485_+SINEAluAluY
CAediting_1131450chr16_71926528_+SINEAluAluY
CAediting_1131451chr16_71926531_+SINEAluAluY
CAediting_1131452chr16_71926545_+SINEAluAluY
CAediting_1131453chr16_71926548_+SINEAluAluY
CAediting_1131454chr16_71926553_+SINEAluAluY
CAediting_1131455chr16_71926557_+SINEAluAluY
CAediting_1131456chr16_71926569_+SINEAluAluY
CAediting_1131457chr16_71926585_+SINEAluAluY
CAediting_1131458chr16_71926606_+SINEAluAluY
CAediting_1131459chr16_71926607_+SINEAluAluY
CAediting_1131460chr16_71926608_+SINEAluAluY
CAediting_1131461chr16_71926620_+SINEAluAluY
CAediting_1131462chr16_71926629_+SINEAluAluY
CAediting_1131463chr16_71926636_+SINEAluAluY
CAediting_1131464chr16_71927222_+SINEAluAluSz
CAediting_1131465chr16_71927236_+SINEAluAluSz
CAediting_1131466chr16_71927238_+SINEAluAluSz
CAediting_1131467chr16_71927244_+SINEAluAluSz
CAediting_1131468chr16_71927289_+SINEAluAluSz
CAediting_1131469chr16_71927296_+SINEAluAluSz
CAediting_1131470chr16_71927302_+SINEAluAluSz
CAediting_1131471chr16_71927303_+SINEAluAluSz
CAediting_1131472chr16_71927313_+SINEAluAluSz
CAediting_1131473chr16_71927324_+SINEAluAluSz
CAediting_1131474chr16_71927327_+SINEAluAluSz
CAediting_1131475chr16_71927328_+SINEAluAluSz
CAediting_1131476chr16_71927333_+SINEAluAluSz
CAediting_1131477chr16_71927336_+SINEAluAluSz
CAediting_1131478chr16_71927337_+SINEAluAluSz
CAediting_1131479chr16_71927338_+SINEAluAluSz
CAediting_1131480chr16_71927342_+SINEAluAluSz
CAediting_1131481chr16_71927346_+SINEAluAluSz
CAediting_1131482chr16_71927358_+SINEAluAluSz
CAediting_1131483chr16_71927368_+SINEAluAluSz
CAediting_1131484chr16_71927369_+SINEAluAluSz
CAediting_1131485chr16_71927410_+SINEAluAluSz
CAediting_1131486chr16_71927414_+SINEAluAluSz
CAediting_1131487chr16_71927429_+SINEAluAluSz
CAediting_1131488chr16_71927443_+SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for IST1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1131355chr16_71923384_+71923378:719233865SS0+4iTCTGTAAGT7.96TCTGTAGGT2.49
ESCAediting_1131355chr16_71923384_+71923382:719233905SS1+0iTAAGTGCCT-6.02TAGGTGCCT1.26
IRCAediting_1131355chr16_71923384_+71923378:719233865SS0+4iTCTGTAAGT7.96TCTGTAGGT2.49
IRCAediting_1131355chr16_71923384_+71923382:719233905SS1+0iTAAGTGCCT-6.02TAGGTGCCT1.26
MEX_1CAediting_1131355chr16_71923384_+71923382:719233905SS1+0iTAAGTGCCT-6.02TAGGTGCCT1.26

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000182149.19.IST1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000182149.19.IST1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for IST1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for IST1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for IST1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229414chr17_67471546_+ENSG00000182149.19ENST00000535424hsa-miR-548aa71929181719291877mer-m87192916071929188147-13.04
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000535424hsa-miR-548aa71928864719288707mer-m87192884771928871145-14.74
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000535424hsa-miR-4423-3p71930154719301607mer-m87193014171930161145-16.53
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000535424hsa-miR-4423-3p71928753719287597mer-m87192874071928760170-23.45
CAediting_1229414chr17_67471546_+ENSG00000182149.19ENST00000606369hsa-miR-548aa71929181719291877mer-m87192916071929188147-13.04
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000606369hsa-miR-548aa71928864719288707mer-m87192884771928871145-14.74
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000606369hsa-miR-4423-3p71930154719301607mer-m87193014171930161145-16.53
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000606369hsa-miR-4423-3p71928753719287597mer-m87192874071928760170-23.45
CAediting_1229414chr17_67471546_+ENSG00000182149.19ENST00000378799hsa-miR-548aa71929181719291877mer-m87192916071929188147-13.04
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000378799hsa-miR-548aa71928864719288707mer-m87192884771928871145-14.74
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000378799hsa-miR-548aa71930640719306467mer-m87193062471930647151-12.68
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000378799hsa-miR-4423-3p71930154719301607mer-m87193014171930161145-16.53
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000378799hsa-miR-4423-3p71928753719287597mer-m87192874071928760170-23.45
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000329908hsa-miR-548aa71928864719288707mer-m87192884771928871145-14.74
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000329908hsa-miR-4423-3p71928753719287597mer-m87192874071928760170-23.45
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000378798hsa-miR-548aa71928864719288707mer-m87192884771928871145-14.74
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000378798hsa-miR-4423-3p71928753719287597mer-m87192874071928760170-23.45
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000439924hsa-miR-548aa71928864719288707mer-m87192884771928871145-14.74
CAediting_1160181chr17_7017644_-ENSG00000182149.19ENST00000439924hsa-miR-195-3p71927757719277637mer-1a7192774171927763141-16.44
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000439924hsa-miR-4423-3p71928753719287597mer-m87192874071928760170-23.45
CAediting_1229415chr17_67471547_+ENSG00000182149.19ENST00000456820hsa-miR-548aa71928864719288707mer-m87192884771928871145-14.74
CAediting_77128chr1_85133844_+ENSG00000182149.19ENST00000456820hsa-miR-4423-3p71928753719287597mer-m87192874071928760170-23.45
CAediting_1160181chr17_7017644_-ENSG00000182149.19ENST00000536027hsa-miR-195-3p71927757719277637mer-1a7192774171927763141-16.44

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000182149.19ENST00000535424hsa-miR-200b-3p71929353719293586mer7192933871929359140-11.32
CAediting_1524209chrX_134546392_-ENSG00000182149.19ENST00000535424hsa-miR-503-5p71929322719293276mer7192930571929328150-24.79
CAediting_980496chr14_31014685_-ENSG00000182149.19ENST00000535424hsa-miR-624-3p71928269719282757mer-m87192825271928276145-19.41
CAediting_393chr1_1167164_+ENSG00000182149.19ENST00000606369hsa-miR-200b-3p71929353719293586mer7192933871929359140-11.32
CAediting_1524209chrX_134546392_-ENSG00000182149.19ENST00000606369hsa-miR-503-5p71929322719293276mer7192930571929328150-24.79
CAediting_980496chr14_31014685_-ENSG00000182149.19ENST00000606369hsa-miR-624-3p71928269719282757mer-m87192825271928276145-19.41
CAediting_393chr1_1167164_+ENSG00000182149.19ENST00000378799hsa-miR-200b-3p71929353719293586mer7192933871929359140-11.32
CAediting_1524209chrX_134546392_-ENSG00000182149.19ENST00000378799hsa-miR-503-5p71929322719293276mer7192930571929328150-24.79
CAediting_980496chr14_31014685_-ENSG00000182149.19ENST00000378799hsa-miR-624-3p71928269719282757mer-m87192825271928276145-19.41
CAediting_980496chr14_31014685_-ENSG00000182149.19ENST00000329908hsa-miR-624-3p71928269719282757mer-m87192825271928276145-19.41
CAediting_980496chr14_31014685_-ENSG00000182149.19ENST00000378798hsa-miR-624-3p71928269719282757mer-m87192825271928276145-19.41
CAediting_980496chr14_31014685_-ENSG00000182149.19ENST00000439924hsa-miR-624-3p71928269719282757mer-m87192825271928276145-19.41
CAediting_980496chr14_31014685_-ENSG00000182149.19ENST00000456820hsa-miR-624-3p71928269719282757mer-m87192825271928276145-19.41

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for IST1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for IST1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LUADCAediting_1131399chr16_71925703_+0.04046088458211420.242110316883082....
LUADCAediting_1131460chr16_71926608_+0.03048710334281050.289444967477222....

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Relation with cancer stages for IST1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KIRCpathologic_stageCAediting_1131399chr16_71925703_+0.04547037628385290.164138268569828
KIRCpathologic_stageCAediting_1131460chr16_71926608_+0.0007594399972356320.298480275306152
KIRCpathologic_stageCAediting_1131466chr16_71927238_+0.02152514099373550.202256609828795
LUSCpathologic_stageCAediting_1131399chr16_71925703_+0.03438245014906190.278330384952981

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Relation with survival for IST1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for IST1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for IST1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource