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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ZFYVE16 (CAeditome ID:9765)

Gene summary for ZFYVE16

check button Gene summary
Gene informationGene symbol

ZFYVE16

Gene ID

9765

Gene namezinc finger FYVE-type containing 16
SynonymsPPP1R69
Cytomap

5q14.1

Type of geneprotein-coding
Descriptionzinc finger FYVE domain-containing protein 16endosome-associated FYVE-domain proteinprotein phosphatase 1, regulatory subunit 69zinc finger, FYVE domain containing 16
Modification date20210518
UniProtAcc

Q7Z3T8

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
ZFYVE16

GO:0005545

Zinc finger FYVE domain-containing protein 16

11546807

ZFYVE16

GO:0005547

Zinc finger FYVE domain-containing protein 16

11433298

ZFYVE16

GO:0005769

Zinc finger FYVE domain-containing protein 16

11546807

ZFYVE16

GO:0005829

Zinc finger FYVE domain-containing protein 16

0000052

ZFYVE16

GO:0043231

Zinc finger FYVE domain-containing protein 16

0000052


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RNA A-to-I events for ZFYVE16

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000039319.15

check button RNA A-to-I editing events in Cancer.
CAediting_418231(80410830, +), CAediting_418232(80412946, +), CAediting_418233(80412993, +), CAediting_418234(80413029, +), CAediting_418235(80413072, +), CAediting_418236(80413096, +), CAediting_418237(80413147, +), CAediting_418238(80413158, +), CAediting_418239(80413282, +), CAediting_418240(80413392, +), CAediting_418241(80413399, +), CAediting_418242(80413421, +), CAediting_418243(80422251, +), CAediting_418244(80423004, +), CAediting_418245(80426979, +), CAediting_418246(80426980, +), CAediting_418247(80427821, +), CAediting_418248(80427825, +), CAediting_418249(80427922, +), CAediting_418250(80442143, +), CAediting_418251(80442207, +), CAediting_418252(80445965, +), CAediting_418253(80446013, +), CAediting_418254(80446025, +), CAediting_418255(80446076, +), CAediting_418256(80446079, +), CAediting_418257(80446130, +), CAediting_418258(80446131, +), CAediting_418259(80446135, +), CAediting_418260(80446970, +), CAediting_418261(80446979, +), CAediting_418262(80447006, +), CAediting_418263(80447007, +), CAediting_418264(80447015, +), CAediting_418265(80447029, +), CAediting_418266(80447047, +), CAediting_418267(80447052, +), CAediting_418268(80447060, +), CAediting_418269(80447061, +), CAediting_418270(80447071, +), CAediting_418271(80447075, +), CAediting_418272(80447082, +), CAediting_418273(80447083, +), CAediting_418274(80447085, +), CAediting_418275(80447096, +), CAediting_418276(80447108, +), CAediting_418277(80447111, +), CAediting_418278(80447113, +), CAediting_418279(80447117, +), CAediting_418280(80447121, +), CAediting_418281(80447125, +), CAediting_418282(80447143, +), CAediting_418283(80447149, +), CAediting_418284(80447153, +), CAediting_418285(80447163, +), CAediting_418286(80447187, +), CAediting_418287(80447188, +), CAediting_418288(80447192, +), CAediting_418289(80447195, +), CAediting_418290(80447199, +), CAediting_418291(80447208, +), CAediting_418292(80447212, +), CAediting_418293(80447216, +), CAediting_418294(80447249, +), CAediting_418295(80452356, +), CAediting_418296(80452360, +), CAediting_418297(80452375, +), CAediting_418298(80452384, +), CAediting_418299(80452389, +), CAediting_418300(80452421, +), CAediting_418301(80454772, +), CAediting_418302(80454784, +), CAediting_418303(80457750, +), CAediting_418304(80457756, +), CAediting_418305(80457772, +), CAediting_418306(80457811, +), CAediting_418307(80457820, +), CAediting_418308(80457848, +), CAediting_418309(80457849, +), CAediting_418310(80457867, +), CAediting_418311(80457869, +), CAediting_418312(80457872, +), CAediting_418313(80457879, +), CAediting_418314(80457905, +), CAediting_418315(80457911, +), CAediting_418316(80459061, +), CAediting_418317(80461929, +), CAediting_418318(80466402, +), CAediting_418319(80466416, +), CAediting_418320(80466487, +), CAediting_418321(80466515, +), CAediting_418322(80466521, +), CAediting_418323(80466530, +), CAediting_418324(80466540, +), CAediting_418325(80466548, +), CAediting_418326(80466575, +), CAediting_418327(80466578, +), CAediting_418328(80466579, +), CAediting_418329(80466584, +), CAediting_418330(80466601, +), CAediting_418331(80466607, +), CAediting_418332(80466617, +), CAediting_418333(80466639, +), CAediting_418334(80467730, +), CAediting_418335(80467745, +), CAediting_418336(80467747, +), CAediting_418337(80467753, +), CAediting_418338(80467760, +), CAediting_418339(80467763, +), CAediting_418340(80467764, +), CAediting_418341(80467767, +), CAediting_418342(80467768, +), CAediting_418343(80467770, +), CAediting_418344(80467773, +), CAediting_418345(80467783, +), CAediting_418346(80467784, +), CAediting_418347(80467792, +), CAediting_418348(80467793, +), CAediting_418349(80467800, +), CAediting_418350(80467806, +), CAediting_418351(80467809, +), CAediting_418352(80467813, +), CAediting_418353(80467835, +), CAediting_418354(80467837, +), CAediting_418355(80467838, +), CAediting_418356(80467846, +), CAediting_418357(80467848, +), CAediting_418358(80467851, +), CAediting_418359(80467854, +), CAediting_418360(80467855, +), CAediting_418361(80467856, +), CAediting_418362(80467864, +), CAediting_418363(80467872, +), CAediting_418364(80467891, +), CAediting_418365(80467894, +), CAediting_418366(80467904, +), CAediting_418367(80467916, +), CAediting_418368(80467923, +), CAediting_418369(80467930, +), CAediting_418370(80467934, +), CAediting_418371(80469236, +), CAediting_418372(80469445, +), CAediting_418373(80470694, +), CAediting_418374(80470785, +), CAediting_418375(80472279, +), CAediting_418376(80476044, +), CAediting_418377(80476047, +), CAediting_418378(80476048, +), CAediting_418379(80476061, +), CAediting_418380(80476166, +), CAediting_418381(80476211, +), CAediting_418382(80478931, +),

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RNA editing positional annotations for ZFYVE16 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_418231chr5_80410830_+ncRNA_intronic
CAediting_418232chr5_80412946_+ncRNA_intronic
CAediting_418233chr5_80412993_+ncRNA_intronic
CAediting_418234chr5_80413029_+ncRNA_intronic
CAediting_418235chr5_80413072_+ncRNA_intronic
CAediting_418236chr5_80413096_+ncRNA_intronic
CAediting_418237chr5_80413147_+ncRNA_intronic
CAediting_418238chr5_80413158_+ncRNA_intronic
CAediting_418239chr5_80413282_+ncRNA_intronic
CAediting_418240chr5_80413392_+ncRNA_intronic
CAediting_418241chr5_80413399_+ncRNA_intronic
CAediting_418242chr5_80413421_+ncRNA_intronic
CAediting_418243chr5_80422251_+ncRNA_intronic
CAediting_418244chr5_80423004_+ncRNA_intronic
CAediting_418245chr5_80426979_+ncRNA_intronic
CAediting_418246chr5_80426980_+ncRNA_intronic
CAediting_418247chr5_80427821_+ncRNA_intronic
CAediting_418248chr5_80427825_+ncRNA_intronic
CAediting_418249chr5_80427922_+ncRNA_intronic
CAediting_418250chr5_80442143_+ncRNA_intronic
CAediting_418251chr5_80442207_+ncRNA_intronic
CAediting_418252chr5_80445965_+ncRNA_intronic
CAediting_418253chr5_80446013_+ncRNA_intronic
CAediting_418254chr5_80446025_+ncRNA_intronic
CAediting_418255chr5_80446076_+ncRNA_intronic
CAediting_418256chr5_80446079_+ncRNA_intronic
CAediting_418257chr5_80446130_+ncRNA_intronic
CAediting_418258chr5_80446131_+ncRNA_intronic
CAediting_418259chr5_80446135_+ncRNA_intronic
CAediting_418260chr5_80446970_+ncRNA_intronic
CAediting_418261chr5_80446979_+ncRNA_intronic
CAediting_418262chr5_80447006_+ncRNA_intronic
CAediting_418263chr5_80447007_+ncRNA_intronic
CAediting_418264chr5_80447015_+ncRNA_intronic
CAediting_418265chr5_80447029_+ncRNA_intronic
CAediting_418266chr5_80447047_+ncRNA_intronic
CAediting_418267chr5_80447052_+ncRNA_intronic
CAediting_418268chr5_80447060_+ncRNA_intronic
CAediting_418269chr5_80447061_+ncRNA_intronic
CAediting_418270chr5_80447071_+ncRNA_intronic
CAediting_418271chr5_80447075_+ncRNA_intronic
CAediting_418272chr5_80447082_+ncRNA_intronic
CAediting_418273chr5_80447083_+ncRNA_intronic
CAediting_418274chr5_80447085_+ncRNA_intronic
CAediting_418275chr5_80447096_+ncRNA_intronic
CAediting_418276chr5_80447108_+ncRNA_intronic
CAediting_418277chr5_80447111_+ncRNA_intronic
CAediting_418278chr5_80447113_+ncRNA_intronic
CAediting_418279chr5_80447117_+ncRNA_intronic
CAediting_418280chr5_80447121_+ncRNA_intronic
CAediting_418281chr5_80447125_+ncRNA_intronic
CAediting_418282chr5_80447143_+ncRNA_intronic
CAediting_418283chr5_80447149_+ncRNA_intronic
CAediting_418284chr5_80447153_+ncRNA_intronic
CAediting_418285chr5_80447163_+ncRNA_intronic
CAediting_418286chr5_80447187_+ncRNA_intronic
CAediting_418287chr5_80447188_+ncRNA_intronic
CAediting_418288chr5_80447192_+ncRNA_intronic
CAediting_418289chr5_80447195_+ncRNA_intronic
CAediting_418290chr5_80447199_+ncRNA_intronic
CAediting_418291chr5_80447208_+ncRNA_intronic
CAediting_418292chr5_80447212_+ncRNA_intronic
CAediting_418293chr5_80447216_+ncRNA_intronic
CAediting_418294chr5_80447249_+ncRNA_intronic
CAediting_418295chr5_80452356_+ncRNA_exonic
CAediting_418296chr5_80452360_+ncRNA_exonic
CAediting_418297chr5_80452375_+ncRNA_exonic
CAediting_418298chr5_80452384_+ncRNA_exonic
CAediting_418299chr5_80452389_+ncRNA_exonic
CAediting_418300chr5_80452421_+ncRNA_exonic
CAediting_418301chr5_80454772_+ncRNA_exonic
CAediting_418302chr5_80454784_+ncRNA_exonic
CAediting_418303chr5_80457750_+ncRNA_intronic
CAediting_418304chr5_80457756_+ncRNA_intronic
CAediting_418305chr5_80457772_+ncRNA_intronic
CAediting_418306chr5_80457811_+ncRNA_intronic
CAediting_418307chr5_80457820_+ncRNA_intronic
CAediting_418308chr5_80457848_+ncRNA_intronic
CAediting_418309chr5_80457849_+ncRNA_intronic
CAediting_418310chr5_80457867_+ncRNA_intronic
CAediting_418311chr5_80457869_+ncRNA_intronic
CAediting_418312chr5_80457872_+ncRNA_intronic
CAediting_418313chr5_80457879_+ncRNA_intronic
CAediting_418314chr5_80457905_+ncRNA_intronic
CAediting_418315chr5_80457911_+ncRNA_intronic
CAediting_418316chr5_80459061_+ncRNA_intronic
CAediting_418317chr5_80461929_+ncRNA_intronic
CAediting_418318chr5_80466402_+ncRNA_intronic
CAediting_418319chr5_80466416_+ncRNA_intronic
CAediting_418320chr5_80466487_+ncRNA_intronic
CAediting_418321chr5_80466515_+ncRNA_intronic
CAediting_418322chr5_80466521_+ncRNA_intronic
CAediting_418323chr5_80466530_+ncRNA_intronic
CAediting_418324chr5_80466540_+ncRNA_intronic
CAediting_418325chr5_80466548_+ncRNA_intronic
CAediting_418326chr5_80466575_+ncRNA_intronic
CAediting_418327chr5_80466578_+ncRNA_intronic
CAediting_418328chr5_80466579_+ncRNA_intronic
CAediting_418329chr5_80466584_+ncRNA_intronic
CAediting_418330chr5_80466601_+ncRNA_intronic
CAediting_418331chr5_80466607_+ncRNA_intronic
CAediting_418332chr5_80466617_+ncRNA_intronic
CAediting_418333chr5_80466639_+ncRNA_intronic
CAediting_418334chr5_80467730_+ncRNA_intronic
CAediting_418335chr5_80467745_+ncRNA_intronic
CAediting_418336chr5_80467747_+ncRNA_intronic
CAediting_418337chr5_80467753_+ncRNA_intronic
CAediting_418338chr5_80467760_+ncRNA_intronic
CAediting_418339chr5_80467763_+ncRNA_intronic
CAediting_418340chr5_80467764_+ncRNA_intronic
CAediting_418341chr5_80467767_+ncRNA_intronic
CAediting_418342chr5_80467768_+ncRNA_intronic
CAediting_418343chr5_80467770_+ncRNA_intronic
CAediting_418344chr5_80467773_+ncRNA_intronic
CAediting_418345chr5_80467783_+ncRNA_intronic
CAediting_418346chr5_80467784_+ncRNA_intronic
CAediting_418347chr5_80467792_+ncRNA_intronic
CAediting_418348chr5_80467793_+ncRNA_intronic
CAediting_418349chr5_80467800_+ncRNA_intronic
CAediting_418350chr5_80467806_+ncRNA_intronic
CAediting_418351chr5_80467809_+ncRNA_intronic
CAediting_418352chr5_80467813_+ncRNA_intronic
CAediting_418353chr5_80467835_+ncRNA_intronic
CAediting_418354chr5_80467837_+ncRNA_intronic
CAediting_418355chr5_80467838_+ncRNA_intronic
CAediting_418356chr5_80467846_+ncRNA_intronic
CAediting_418357chr5_80467848_+ncRNA_intronic
CAediting_418358chr5_80467851_+ncRNA_intronic
CAediting_418359chr5_80467854_+ncRNA_intronic
CAediting_418360chr5_80467855_+ncRNA_intronic
CAediting_418361chr5_80467856_+ncRNA_intronic
CAediting_418362chr5_80467864_+ncRNA_intronic
CAediting_418363chr5_80467872_+ncRNA_intronic
CAediting_418364chr5_80467891_+ncRNA_intronic
CAediting_418365chr5_80467894_+ncRNA_intronic
CAediting_418366chr5_80467904_+ncRNA_intronic
CAediting_418367chr5_80467916_+ncRNA_intronic
CAediting_418368chr5_80467923_+ncRNA_intronic
CAediting_418369chr5_80467930_+ncRNA_intronic
CAediting_418370chr5_80467934_+ncRNA_intronic
CAediting_418371chr5_80469236_+ncRNA_intronic
CAediting_418372chr5_80469445_+ncRNA_intronic
CAediting_418373chr5_80470694_+ncRNA_intronic
CAediting_418374chr5_80470785_+ncRNA_intronic
CAediting_418375chr5_80472279_+ncRNA_intronic
CAediting_418376chr5_80476044_+ncRNA_intronic
CAediting_418377chr5_80476047_+ncRNA_intronic
CAediting_418378chr5_80476048_+ncRNA_intronic
CAediting_418379chr5_80476061_+ncRNA_intronic
CAediting_418380chr5_80476166_+ncRNA_intronic
CAediting_418381chr5_80476211_+ncRNA_intronic
CAediting_418382chr5_80478931_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_418231chr5_80410830_+SINEAluAluSc
CAediting_418232chr5_80412946_+SINEAluAluJo
CAediting_418233chr5_80412993_+SINEAluAluJo
CAediting_418234chr5_80413029_+SINEAluAluJo
CAediting_418235chr5_80413072_+SINEAluAluJo
CAediting_418236chr5_80413096_+SINEAluAluJo
CAediting_418237chr5_80413147_+SINEAluAluJo
CAediting_418238chr5_80413158_+SINEAluAluJo
CAediting_418239chr5_80413282_+SINEAluAluSp
CAediting_418240chr5_80413392_+SINEAluAluSp
CAediting_418241chr5_80413399_+SINEAluAluSp
CAediting_418242chr5_80413421_+SINEAluAluSp
CAediting_418243chr5_80422251_+LINEL1L1PA5
CAediting_418244chr5_80423004_+LINEL1L1PA5
CAediting_418245chr5_80426979_+LINEL1L1PA10
CAediting_418246chr5_80426980_+LINEL1L1PA10
CAediting_418247chr5_80427821_+SINEAluAluSz
CAediting_418248chr5_80427825_+SINEAluAluSz
CAediting_418249chr5_80427922_+SINEAluAluSz
CAediting_418250chr5_80442143_+SINEAluAluSz
CAediting_418251chr5_80442207_+SINEAluAluSz
CAediting_418252chr5_80445965_+SINEAluAluSq
CAediting_418253chr5_80446013_+SINEAluAluSq
CAediting_418254chr5_80446025_+SINEAluAluSq
CAediting_418255chr5_80446076_+SINEAluAluSq
CAediting_418256chr5_80446079_+SINEAluAluSq
CAediting_418257chr5_80446130_+SINEAluAluSq
CAediting_418258chr5_80446131_+SINEAluAluSq
CAediting_418259chr5_80446135_+SINEAluAluSq
CAediting_418262chr5_80447006_+SINEAluAluSx
CAediting_418263chr5_80447007_+SINEAluAluSx
CAediting_418264chr5_80447015_+SINEAluAluSx
CAediting_418265chr5_80447029_+SINEAluAluSx
CAediting_418266chr5_80447047_+SINEAluAluSx
CAediting_418267chr5_80447052_+SINEAluAluSx
CAediting_418268chr5_80447060_+SINEAluAluSx
CAediting_418269chr5_80447061_+SINEAluAluSx
CAediting_418270chr5_80447071_+SINEAluAluSx
CAediting_418271chr5_80447075_+SINEAluAluSx
CAediting_418272chr5_80447082_+SINEAluAluSx
CAediting_418273chr5_80447083_+SINEAluAluSx
CAediting_418274chr5_80447085_+SINEAluAluSx
CAediting_418275chr5_80447096_+SINEAluAluSx
CAediting_418276chr5_80447108_+SINEAluAluSx
CAediting_418277chr5_80447111_+SINEAluAluSx
CAediting_418278chr5_80447113_+SINEAluAluSx
CAediting_418279chr5_80447117_+SINEAluAluSx
CAediting_418280chr5_80447121_+SINEAluAluSx
CAediting_418281chr5_80447125_+SINEAluAluSx
CAediting_418282chr5_80447143_+SINEAluAluSx
CAediting_418283chr5_80447149_+SINEAluAluSx
CAediting_418284chr5_80447153_+SINEAluAluSx
CAediting_418285chr5_80447163_+SINEAluAluSx
CAediting_418286chr5_80447187_+SINEAluAluSx
CAediting_418287chr5_80447188_+SINEAluAluSx
CAediting_418288chr5_80447192_+SINEAluAluSx
CAediting_418289chr5_80447195_+SINEAluAluSx
CAediting_418290chr5_80447199_+SINEAluAluSx
CAediting_418291chr5_80447208_+SINEAluAluSx
CAediting_418292chr5_80447212_+SINEAluAluSx
CAediting_418293chr5_80447216_+SINEAluAluSx
CAediting_418294chr5_80447249_+SINEAluAluSx
CAediting_418295chr5_80452356_+SINEAluAluSx1
CAediting_418296chr5_80452360_+SINEAluAluSx1
CAediting_418297chr5_80452375_+SINEAluAluSx1
CAediting_418298chr5_80452384_+SINEAluAluSx1
CAediting_418299chr5_80452389_+SINEAluAluSx1
CAediting_418300chr5_80452421_+SINEAluAluSx1
CAediting_418301chr5_80454772_+SINEAluAluY
CAediting_418302chr5_80454784_+SINEAluAluY
CAediting_418303chr5_80457750_+SINEAluAluY
CAediting_418304chr5_80457756_+SINEAluAluY
CAediting_418305chr5_80457772_+SINEAluAluY
CAediting_418306chr5_80457811_+SINEAluAluY
CAediting_418307chr5_80457820_+SINEAluAluY
CAediting_418308chr5_80457848_+SINEAluAluY
CAediting_418309chr5_80457849_+SINEAluAluY
CAediting_418310chr5_80457867_+SINEAluAluY
CAediting_418311chr5_80457869_+SINEAluAluY
CAediting_418312chr5_80457872_+SINEAluAluY
CAediting_418313chr5_80457879_+SINEAluAluY
CAediting_418314chr5_80457905_+SINEAluAluY
CAediting_418315chr5_80457911_+SINEAluAluY
CAediting_418316chr5_80459061_+SINEAluAluSx1
CAediting_418317chr5_80461929_+SINEAluAluSx1
CAediting_418318chr5_80466402_+LINEL1L1M4
CAediting_418319chr5_80466416_+LINEL1L1M4
CAediting_418320chr5_80466487_+LINEL1L1M4
CAediting_418321chr5_80466515_+LINEL1L1M4
CAediting_418322chr5_80466521_+LINEL1L1M4
CAediting_418323chr5_80466530_+LINEL1L1M4
CAediting_418324chr5_80466540_+LINEL1L1M4
CAediting_418325chr5_80466548_+LINEL1L1M4
CAediting_418326chr5_80466575_+LINEL1L1M4
CAediting_418327chr5_80466578_+LINEL1L1M4
CAediting_418328chr5_80466579_+LINEL1L1M4
CAediting_418329chr5_80466584_+LINEL1L1M4
CAediting_418330chr5_80466601_+LINEL1L1M4
CAediting_418331chr5_80466607_+LINEL1L1M4
CAediting_418332chr5_80466617_+LINEL1L1M4
CAediting_418333chr5_80466639_+LINEL1L1M4
CAediting_418334chr5_80467730_+LINEL1L1M4
CAediting_418335chr5_80467745_+LINEL1L1M4
CAediting_418336chr5_80467747_+LINEL1L1M4
CAediting_418337chr5_80467753_+LINEL1L1M4
CAediting_418338chr5_80467760_+LINEL1L1M4
CAediting_418339chr5_80467763_+LINEL1L1M4
CAediting_418340chr5_80467764_+LINEL1L1M4
CAediting_418341chr5_80467767_+LINEL1L1M4
CAediting_418342chr5_80467768_+LINEL1L1M4
CAediting_418343chr5_80467770_+LINEL1L1M4
CAediting_418344chr5_80467773_+LINEL1L1M4
CAediting_418345chr5_80467783_+LINEL1L1M4
CAediting_418346chr5_80467784_+LINEL1L1M4
CAediting_418347chr5_80467792_+LINEL1L1M4
CAediting_418348chr5_80467793_+LINEL1L1M4
CAediting_418349chr5_80467800_+LINEL1L1M4
CAediting_418350chr5_80467806_+LINEL1L1M4
CAediting_418351chr5_80467809_+LINEL1L1M4
CAediting_418352chr5_80467813_+LINEL1L1M4
CAediting_418353chr5_80467835_+LINEL1L1M4
CAediting_418354chr5_80467837_+LINEL1L1M4
CAediting_418355chr5_80467838_+LINEL1L1M4
CAediting_418356chr5_80467846_+LINEL1L1M4
CAediting_418357chr5_80467848_+LINEL1L1M4
CAediting_418358chr5_80467851_+LINEL1L1M4
CAediting_418359chr5_80467854_+LINEL1L1M4
CAediting_418360chr5_80467855_+LINEL1L1M4
CAediting_418361chr5_80467856_+LINEL1L1M4
CAediting_418362chr5_80467864_+LINEL1L1M4
CAediting_418363chr5_80467872_+LINEL1L1M4
CAediting_418364chr5_80467891_+LINEL1L1M4
CAediting_418365chr5_80467894_+LINEL1L1M4
CAediting_418366chr5_80467904_+LINEL1L1M4
CAediting_418367chr5_80467916_+LINEL1L1M4
CAediting_418368chr5_80467923_+LINEL1L1M4
CAediting_418369chr5_80467930_+LINEL1L1M4
CAediting_418370chr5_80467934_+LINEL1L1M4
CAediting_418371chr5_80469236_+SINEAluAluJb
CAediting_418372chr5_80469445_+SINEAluAluJo
CAediting_418373chr5_80470694_+SINEAluAluJr
CAediting_418374chr5_80470785_+SINEAluAluJr
CAediting_418376chr5_80476044_+SINEAluAluSx
CAediting_418377chr5_80476047_+SINEAluAluSx
CAediting_418378chr5_80476048_+SINEAluAluSx
CAediting_418379chr5_80476061_+SINEAluAluSx
CAediting_418380chr5_80476166_+SINEAluAluSx
CAediting_418381chr5_80476211_+SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for ZFYVE16

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000039319.15.ZFYVE16.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000039319.15.ZFYVE16.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZFYVE16

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZFYVE16

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for ZFYVE16

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000338008hsa-miR-1285-5p80478928804789347mer-m88047891580478935152.00-11.45
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000338008hsa-miR-342-3p80478926804789338mer-1a8047891180478933140.00-14.42
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000510158hsa-miR-1285-5p80478928804789347mer-m88047891580478935152.00-11.45
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000510158hsa-miR-342-3p80478926804789338mer-1a8047891180478933140.00-14.42

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000338008hsa-miR-200a-5p80478928804789347mer-m88047891480478935140-16.28
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000338008hsa-miR-200b-5p80478928804789347mer-m88047891480478935140-12.25
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000510158hsa-miR-200a-5p80478928804789347mer-m88047891480478935140-16.28
CAediting_418382chr5_80478931_+ENSG00000039319.15ENST00000510158hsa-miR-200b-5p80478928804789347mer-m88047891480478935140-12.25

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000039319.15ENST00000513789hsa-miR-605-3p80474755804747628mer-1a8047474080474762151-19.37
CAediting_393chr1_1167164_+ENSG00000039319.15ENST00000513789hsa-miR-200b-3p80477257804772648mer-1a8047724380477264140-14.22
CAediting_1229413chr17_67471544_+ENSG00000039319.15ENST00000338008hsa-miR-548aa80477785804777917mer-m88047776780477792155-13.59
CAediting_228905chr2_188297554_+ENSG00000039319.15ENST00000338008hsa-miR-561-3p80477919804779257mer-m88047790380477926146-8.04
CAediting_396018chr5_1062918_-ENSG00000039319.15ENST00000338008hsa-miR-463580478728804787336mer8047871280478734145-18.3
CAediting_1229413chr17_67471544_+ENSG00000039319.15ENST00000510158hsa-miR-548aa80477785804777917mer-m88047776780477792155-13.59
CAediting_228905chr2_188297554_+ENSG00000039319.15ENST00000510158hsa-miR-561-3p80477919804779257mer-m88047790380477926146-8.04
CAediting_396018chr5_1062918_-ENSG00000039319.15ENST00000510158hsa-miR-463580478728804787336mer8047871280478734145-18.3
CAediting_117844chr1_162342605_+ENSG00000039319.15ENST00000509558hsa-miR-556-3p80443912804439187mer-m88044389680443919152-14.15
CAediting_228905chr2_188297554_+ENSG00000039319.15ENST00000513789hsa-miR-561-3p80474768804747758mer-1a8047475480474775140-7.4
CAediting_524911chr7_5495852_-ENSG00000039319.15ENST00000513789hsa-miR-589-3p80477283804772908mer-1a8047726780477290144-15.63

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_117844chr1_162342605_+ENSG00000039319.15ENST00000338008hsa-miR-556-3p80478137804781437mer-m88047811980478144144-8.64
CAediting_117844chr1_162342605_+ENSG00000039319.15ENST00000510158hsa-miR-556-3p80478137804781437mer-m88047811980478144144-8.64
CAediting_77128chr1_85133844_+ENSG00000039319.15ENST00000509558hsa-miR-4423-3p80445396804454027mer-m88044538380445403140-11.9

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZFYVE16

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000338008.8protein_codingSoverviewSoverview
ENST00000505560.4protein_codingSoverviewSoverview
ENST00000510158.4protein_codingSoverviewSoverview
ENST00000512558.4retained_intronSoverviewSoverview
ENST00000511829.4retained_intronSoverviewSoverview
ENST00000512907.4retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_418382ENST00000338008.8chr5_80478931_+-1684.90-1684.00-1684.90
CAediting_418382ENST00000505560.4chr5_80478931_+-1653.90-1653.90-1653.90
CAediting_418382ENST00000510158.4chr5_80478931_+-1673.70-1673.70-1673.70
CAediting_418295ENST00000512558.4chr5_80452356_+-1163.70-1163.70-1169.70
CAediting_418296ENST00000512558.4chr5_80452360_+-1163.10-1163.70-1169.70
CAediting_418297ENST00000512558.4chr5_80452375_+-1163.10-1163.70-1169.70
CAediting_418298ENST00000512558.4chr5_80452384_+-1163.70-1163.70-1169.70
CAediting_418299ENST00000512558.4chr5_80452389_+-1163.70-1163.70-1169.70
CAediting_418300ENST00000512558.4chr5_80452421_+-1167.30-1163.70-1169.70
CAediting_418382ENST00000511829.4chr5_80478931_+-892.70-892.30-892.70
CAediting_418301ENST00000512907.4chr5_80454772_+-1491.10-1491.40-1494.80
CAediting_418302ENST00000512907.4chr5_80454784_+-1491.70-1491.40-1494.80
CAediting_418382ENST00000512907.4chr5_80478931_+-1494.80-1491.40-1494.80

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Relation with ADAR for ZFYVE16

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_418288chr5_80447192_+....0.006648773700933710.284125074387682

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Relation with cancer stages for ZFYVE16

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ZFYVE16

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ZFYVE16

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ZFYVE16

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
ZFYVE16C0023893Liver Cirrhosis, Experimental1CTD_human