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Editing gene: CEP104 (CAeditome ID:9731)

Gene summary for CEP104

Gene summary

Gene information	Gene symbol	CEP104
	Gene ID	9731
	Gene name	centrosomal protein 104
	Synonyms	CFAP256\|GlyBP\|JBTS25\|KIAA0562\|ROC22
	Cytomap	1p36.32
	Type of gene	protein-coding
	Description	centrosomal protein of 104 kDacentrosomal protein 104kDa
	Modification date	20210518
	UniProtAcc	O60308
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CEP104	GO:0005814	Centrosomal protein of 104 kDa	21399614

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RNA A-to-I events for CEP104

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000116198.11

RNA A-to-I editing events in Cancer.

CAediting_4125(3812574, -), CAediting_4126(3812581, -), CAediting_4127(3812583, -), CAediting_4128(3812587, -), CAediting_4129(3812595, -), CAediting_4130(3812596, -), CAediting_4131(3812610, -), CAediting_4132(3812614, -), CAediting_4133(3812618, -), CAediting_4134(3812635, -), CAediting_4135(3812646, -), CAediting_4136(3812653, -), CAediting_4137(3812658, -), CAediting_4138(3812668, -), CAediting_4139(3812670, -), CAediting_4140(3812672, -), CAediting_4141(3812675, -), CAediting_4142(3812681, -), CAediting_4143(3812691, -), CAediting_4144(3812718, -), CAediting_4145(3812728, -), CAediting_4146(3812731, -), CAediting_4147(3812740, -), CAediting_4148(3812753, -), CAediting_4149(3812757, -), CAediting_4150(3812777, -), CAediting_4151(3812778, -), CAediting_4152(3812793, -), CAediting_4153(3812814, -), CAediting_4154(3812836, -), CAediting_4155(3813086, -), CAediting_4156(3813280, -), CAediting_4157(3813286, -), CAediting_4158(3813293, -), CAediting_4159(3813298, -), CAediting_4160(3813303, -), CAediting_4161(3813308, -), CAediting_4162(3813313, -), CAediting_4163(3813318, -), CAediting_4164(3813323, -), CAediting_4165(3813347, -), CAediting_4166(3813348, -), CAediting_4167(3813356, -), CAediting_4168(3813358, -), CAediting_4169(3813359, -), CAediting_4170(3813362, -), CAediting_4171(3813366, -), CAediting_4172(3813372, -), CAediting_4173(3813374, -), CAediting_4174(3813383, -), CAediting_4175(3813389, -), CAediting_4176(3813405, -), CAediting_4177(3813409, -), CAediting_4178(3813412, -), CAediting_4179(3813413, -), CAediting_4180(3813414, -), CAediting_4181(3813420, -), CAediting_4182(3813421, -), CAediting_4183(3813422, -), CAediting_4184(3813423, -), CAediting_4185(3813424, -), CAediting_4186(3813427, -), CAediting_4187(3813438, -), CAediting_4188(3813439, -), CAediting_4189(3813440, -), CAediting_4190(3813448, -), CAediting_4191(3813449, -), CAediting_4192(3813472, -), CAediting_4193(3813501, -), CAediting_4194(3813509, -), CAediting_4195(3813517, -), CAediting_4196(3813518, -), CAediting_4197(3813525, -), CAediting_4198(3813539, -), CAediting_4199(3813549, -), CAediting_4200(3813572, -), CAediting_4201(3813578, -), CAediting_4202(3813585, -), CAediting_4203(3813594, -), CAediting_4204(3813606, -), CAediting_4205(3813607, -), CAediting_4206(3813621, -), CAediting_4207(3813629, -), CAediting_4208(3813630, -), CAediting_4209(3813637, -), CAediting_4210(3813644, -), CAediting_4211(3813645, -), CAediting_4212(3813657, -), CAediting_4213(3813679, -), CAediting_4214(3813681, -), CAediting_4215(3813683, -), CAediting_4216(3813686, -), CAediting_4217(3813692, -), CAediting_4218(3813701, -), CAediting_4219(3813726, -), CAediting_4220(3813728, -), CAediting_4221(3813738, -), CAediting_4222(3813741, -), CAediting_4223(3813750, -), CAediting_4224(3813763, -), CAediting_4225(3813764, -), CAediting_4226(3813767, -), CAediting_4227(3813768, -), CAediting_4228(3813781, -), CAediting_4229(3813787, -), CAediting_4230(3813788, -), CAediting_4231(3813793, -), CAediting_4232(3813803, -), CAediting_4233(3813811, -), CAediting_4234(3813817, -), CAediting_4235(3813836, -), CAediting_4236(3813842, -), CAediting_4237(3813846, -), CAediting_4238(3814226, -), CAediting_4239(3824247, -), CAediting_4240(3826890, -), CAediting_4241(3826902, -), CAediting_4242(3826903, -), CAediting_4243(3826904, -), CAediting_4244(3826929, -), CAediting_4245(3826945, -), CAediting_4246(3826946, -), CAediting_4247(3826957, -), CAediting_4248(3826985, -), CAediting_4249(3826987, -), CAediting_4250(3827004, -), CAediting_4251(3827005, -), CAediting_4252(3827009, -), CAediting_4253(3827028, -), CAediting_4254(3827040, -), CAediting_4255(3827076, -), CAediting_4256(3827261, -), CAediting_4257(3827307, -), CAediting_4258(3827352, -), CAediting_4259(3827353, -), CAediting_4260(3827375, -), CAediting_4261(3827379, -), CAediting_4262(3827383, -), CAediting_4263(3827439, -), CAediting_4264(3827444, -), CAediting_4265(3827445, -), CAediting_4266(3827447, -), CAediting_4267(3827452, -), CAediting_4268(3827457, -), CAediting_4269(3827501, -), CAediting_4270(3840348, -), CAediting_4271(3842916, -), CAediting_4272(3842926, -), CAediting_4273(3842970, -), CAediting_4274(3843044, -), CAediting_4275(3843439, -), CAediting_4276(3843633, -), CAediting_4277(3844347, -), CAediting_4278(3847865, -), CAediting_4279(3847867, -), CAediting_4280(3847873, -), CAediting_4281(3847903, -), CAediting_4282(3847907, -), CAediting_4283(3847943, -), CAediting_4284(3847972, -), CAediting_4285(3847975, -), CAediting_4286(3847991, -), CAediting_4287(3848008, -), CAediting_4288(3848017, -), CAediting_4289(3853929, -), CAediting_4290(3855306, -), CAediting_4291(3855346, -),

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RNA editing positional annotations for CEP104 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_4125	chr1_3812574_-	UTR3
CAediting_4126	chr1_3812581_-	UTR3
CAediting_4127	chr1_3812583_-	UTR3
CAediting_4128	chr1_3812587_-	UTR3
CAediting_4129	chr1_3812595_-	UTR3
CAediting_4130	chr1_3812596_-	UTR3
CAediting_4131	chr1_3812610_-	UTR3
CAediting_4132	chr1_3812614_-	UTR3
CAediting_4133	chr1_3812618_-	UTR3
CAediting_4134	chr1_3812635_-	UTR3
CAediting_4135	chr1_3812646_-	UTR3
CAediting_4136	chr1_3812653_-	UTR3
CAediting_4137	chr1_3812658_-	UTR3
CAediting_4138	chr1_3812668_-	UTR3
CAediting_4139	chr1_3812670_-	UTR3
CAediting_4140	chr1_3812672_-	UTR3
CAediting_4141	chr1_3812675_-	UTR3
CAediting_4142	chr1_3812681_-	UTR3
CAediting_4143	chr1_3812691_-	UTR3
CAediting_4144	chr1_3812718_-	UTR3
CAediting_4145	chr1_3812728_-	UTR3
CAediting_4146	chr1_3812731_-	UTR3
CAediting_4147	chr1_3812740_-	UTR3
CAediting_4148	chr1_3812753_-	UTR3
CAediting_4149	chr1_3812757_-	UTR3
CAediting_4150	chr1_3812777_-	UTR3
CAediting_4151	chr1_3812778_-	UTR3
CAediting_4152	chr1_3812793_-	UTR3
CAediting_4153	chr1_3812814_-	UTR3
CAediting_4154	chr1_3812836_-	UTR3
CAediting_4155	chr1_3813086_-	UTR3
CAediting_4156	chr1_3813280_-	UTR3
CAediting_4157	chr1_3813286_-	UTR3
CAediting_4158	chr1_3813293_-	UTR3
CAediting_4159	chr1_3813298_-	UTR3
CAediting_4160	chr1_3813303_-	UTR3
CAediting_4161	chr1_3813308_-	UTR3
CAediting_4162	chr1_3813313_-	UTR3
CAediting_4163	chr1_3813318_-	UTR3
CAediting_4164	chr1_3813323_-	UTR3
CAediting_4165	chr1_3813347_-	UTR3
CAediting_4166	chr1_3813348_-	UTR3
CAediting_4167	chr1_3813356_-	UTR3
CAediting_4168	chr1_3813358_-	UTR3
CAediting_4169	chr1_3813359_-	UTR3
CAediting_4170	chr1_3813362_-	UTR3
CAediting_4171	chr1_3813366_-	UTR3
CAediting_4172	chr1_3813372_-	UTR3
CAediting_4173	chr1_3813374_-	UTR3
CAediting_4174	chr1_3813383_-	UTR3
CAediting_4175	chr1_3813389_-	UTR3
CAediting_4176	chr1_3813405_-	UTR3
CAediting_4177	chr1_3813409_-	UTR3
CAediting_4178	chr1_3813412_-	UTR3
CAediting_4179	chr1_3813413_-	UTR3
CAediting_4180	chr1_3813414_-	UTR3
CAediting_4181	chr1_3813420_-	UTR3
CAediting_4182	chr1_3813421_-	UTR3
CAediting_4183	chr1_3813422_-	UTR3
CAediting_4184	chr1_3813423_-	UTR3
CAediting_4185	chr1_3813424_-	UTR3
CAediting_4186	chr1_3813427_-	UTR3
CAediting_4187	chr1_3813438_-	UTR3
CAediting_4188	chr1_3813439_-	UTR3
CAediting_4189	chr1_3813440_-	UTR3
CAediting_4190	chr1_3813448_-	UTR3
CAediting_4191	chr1_3813449_-	UTR3
CAediting_4192	chr1_3813472_-	UTR3
CAediting_4193	chr1_3813501_-	UTR3
CAediting_4194	chr1_3813509_-	UTR3
CAediting_4195	chr1_3813517_-	UTR3
CAediting_4196	chr1_3813518_-	UTR3
CAediting_4197	chr1_3813525_-	UTR3
CAediting_4198	chr1_3813539_-	UTR3
CAediting_4199	chr1_3813549_-	UTR3
CAediting_4200	chr1_3813572_-	UTR3
CAediting_4201	chr1_3813578_-	UTR3
CAediting_4202	chr1_3813585_-	UTR3
CAediting_4203	chr1_3813594_-	UTR3
CAediting_4204	chr1_3813606_-	UTR3
CAediting_4205	chr1_3813607_-	UTR3
CAediting_4206	chr1_3813621_-	UTR3
CAediting_4207	chr1_3813629_-	UTR3
CAediting_4208	chr1_3813630_-	UTR3
CAediting_4209	chr1_3813637_-	UTR3
CAediting_4210	chr1_3813644_-	UTR3
CAediting_4211	chr1_3813645_-	UTR3
CAediting_4212	chr1_3813657_-	UTR3
CAediting_4213	chr1_3813679_-	UTR3
CAediting_4214	chr1_3813681_-	UTR3
CAediting_4215	chr1_3813683_-	UTR3
CAediting_4216	chr1_3813686_-	UTR3
CAediting_4217	chr1_3813692_-	UTR3
CAediting_4218	chr1_3813701_-	UTR3
CAediting_4219	chr1_3813726_-	UTR3
CAediting_4220	chr1_3813728_-	UTR3
CAediting_4221	chr1_3813738_-	UTR3
CAediting_4222	chr1_3813741_-	UTR3
CAediting_4223	chr1_3813750_-	UTR3
CAediting_4224	chr1_3813763_-	UTR3
CAediting_4225	chr1_3813764_-	UTR3
CAediting_4226	chr1_3813767_-	UTR3
CAediting_4227	chr1_3813768_-	UTR3
CAediting_4228	chr1_3813781_-	UTR3
CAediting_4229	chr1_3813787_-	UTR3
CAediting_4230	chr1_3813788_-	UTR3
CAediting_4231	chr1_3813793_-	UTR3
CAediting_4232	chr1_3813803_-	UTR3
CAediting_4233	chr1_3813811_-	UTR3
CAediting_4234	chr1_3813817_-	UTR3
CAediting_4235	chr1_3813836_-	UTR3
CAediting_4236	chr1_3813842_-	UTR3
CAediting_4237	chr1_3813846_-	UTR3
CAediting_4238	chr1_3814226_-	UTR3
CAediting_4239	chr1_3824247_-	intronic
CAediting_4240	chr1_3826890_-	intronic
CAediting_4241	chr1_3826902_-	intronic
CAediting_4242	chr1_3826903_-	intronic
CAediting_4243	chr1_3826904_-	intronic
CAediting_4244	chr1_3826929_-	intronic
CAediting_4245	chr1_3826945_-	intronic
CAediting_4246	chr1_3826946_-	intronic
CAediting_4247	chr1_3826957_-	intronic
CAediting_4248	chr1_3826985_-	intronic
CAediting_4249	chr1_3826987_-	intronic
CAediting_4250	chr1_3827004_-	intronic
CAediting_4251	chr1_3827005_-	intronic
CAediting_4252	chr1_3827009_-	intronic
CAediting_4253	chr1_3827028_-	intronic
CAediting_4254	chr1_3827040_-	intronic
CAediting_4255	chr1_3827076_-	intronic
CAediting_4256	chr1_3827261_-	intronic
CAediting_4257	chr1_3827307_-	intronic
CAediting_4258	chr1_3827352_-	intronic
CAediting_4259	chr1_3827353_-	intronic
CAediting_4260	chr1_3827375_-	intronic
CAediting_4261	chr1_3827379_-	intronic
CAediting_4262	chr1_3827383_-	intronic
CAediting_4263	chr1_3827439_-	intronic
CAediting_4264	chr1_3827444_-	intronic
CAediting_4265	chr1_3827445_-	intronic
CAediting_4266	chr1_3827447_-	intronic
CAediting_4267	chr1_3827452_-	intronic
CAediting_4268	chr1_3827457_-	intronic
CAediting_4269	chr1_3827501_-	intronic
CAediting_4270	chr1_3840348_-	ncRNA_intronic
CAediting_4271	chr1_3842916_-	ncRNA_intronic
CAediting_4272	chr1_3842926_-	ncRNA_intronic
CAediting_4273	chr1_3842970_-	ncRNA_intronic
CAediting_4274	chr1_3843044_-	ncRNA_intronic
CAediting_4275	chr1_3843439_-	ncRNA_intronic
CAediting_4276	chr1_3843633_-	ncRNA_intronic
CAediting_4277	chr1_3844347_-	ncRNA_intronic
CAediting_4278	chr1_3847865_-	ncRNA_intronic
CAediting_4279	chr1_3847867_-	ncRNA_intronic
CAediting_4280	chr1_3847873_-	ncRNA_intronic
CAediting_4281	chr1_3847903_-	ncRNA_intronic
CAediting_4282	chr1_3847907_-	ncRNA_intronic
CAediting_4283	chr1_3847943_-	ncRNA_intronic
CAediting_4284	chr1_3847972_-	ncRNA_intronic
CAediting_4285	chr1_3847975_-	ncRNA_intronic
CAediting_4286	chr1_3847991_-	ncRNA_intronic
CAediting_4287	chr1_3848008_-	ncRNA_intronic
CAediting_4288	chr1_3848017_-	ncRNA_intronic
CAediting_4289	chr1_3853929_-	ncRNA_intronic
CAediting_4290	chr1_3855306_-	ncRNA_intronic
CAediting_4291	chr1_3855346_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_4125	chr1_3812574_-	SINE	Alu	AluSx3
CAediting_4126	chr1_3812581_-	SINE	Alu	AluSx3
CAediting_4127	chr1_3812583_-	SINE	Alu	AluSx3
CAediting_4128	chr1_3812587_-	SINE	Alu	AluSx3
CAediting_4129	chr1_3812595_-	SINE	Alu	AluSx3
CAediting_4130	chr1_3812596_-	SINE	Alu	AluSx3
CAediting_4131	chr1_3812610_-	SINE	Alu	AluSx3
CAediting_4132	chr1_3812614_-	SINE	Alu	AluSx3
CAediting_4133	chr1_3812618_-	SINE	Alu	AluSx3
CAediting_4134	chr1_3812635_-	SINE	Alu	AluSx3
CAediting_4135	chr1_3812646_-	SINE	Alu	AluSx3
CAediting_4136	chr1_3812653_-	SINE	Alu	AluSx3
CAediting_4137	chr1_3812658_-	SINE	Alu	AluSx3
CAediting_4138	chr1_3812668_-	SINE	Alu	AluSx3
CAediting_4139	chr1_3812670_-	SINE	Alu	AluSx3
CAediting_4140	chr1_3812672_-	SINE	Alu	AluSx3
CAediting_4141	chr1_3812675_-	SINE	Alu	AluSx3
CAediting_4142	chr1_3812681_-	SINE	Alu	AluSx3
CAediting_4143	chr1_3812691_-	SINE	Alu	AluSx3
CAediting_4144	chr1_3812718_-	SINE	Alu	AluSx3
CAediting_4145	chr1_3812728_-	SINE	Alu	AluSx3
CAediting_4146	chr1_3812731_-	SINE	Alu	AluSx3
CAediting_4147	chr1_3812740_-	SINE	Alu	AluSx3
CAediting_4148	chr1_3812753_-	SINE	Alu	AluSx3
CAediting_4149	chr1_3812757_-	SINE	Alu	AluSx3
CAediting_4150	chr1_3812777_-	SINE	Alu	AluSx3
CAediting_4151	chr1_3812778_-	SINE	Alu	AluSx3
CAediting_4152	chr1_3812793_-	SINE	Alu	AluSx3
CAediting_4153	chr1_3812814_-	SINE	Alu	AluSx3
CAediting_4154	chr1_3812836_-	SINE	Alu	AluSx3
CAediting_4156	chr1_3813280_-	SINE	Alu	AluSx
CAediting_4157	chr1_3813286_-	SINE	Alu	AluSx
CAediting_4158	chr1_3813293_-	SINE	Alu	AluSx
CAediting_4159	chr1_3813298_-	SINE	Alu	AluSx
CAediting_4160	chr1_3813303_-	SINE	Alu	AluSx
CAediting_4161	chr1_3813308_-	SINE	Alu	AluSx
CAediting_4162	chr1_3813313_-	SINE	Alu	AluSx
CAediting_4163	chr1_3813318_-	SINE	Alu	AluSx
CAediting_4164	chr1_3813323_-	SINE	Alu	AluSx
CAediting_4165	chr1_3813347_-	SINE	Alu	AluSx
CAediting_4166	chr1_3813348_-	SINE	Alu	AluSx
CAediting_4167	chr1_3813356_-	SINE	Alu	AluSx
CAediting_4168	chr1_3813358_-	SINE	Alu	AluSx
CAediting_4169	chr1_3813359_-	SINE	Alu	AluSx
CAediting_4170	chr1_3813362_-	SINE	Alu	AluSx
CAediting_4171	chr1_3813366_-	SINE	Alu	AluSx
CAediting_4172	chr1_3813372_-	SINE	Alu	AluSx
CAediting_4173	chr1_3813374_-	SINE	Alu	AluSx
CAediting_4174	chr1_3813383_-	SINE	Alu	AluSx
CAediting_4175	chr1_3813389_-	SINE	Alu	AluSx
CAediting_4176	chr1_3813405_-	SINE	Alu	AluSx
CAediting_4177	chr1_3813409_-	SINE	Alu	AluSx
CAediting_4178	chr1_3813412_-	SINE	Alu	AluSx
CAediting_4179	chr1_3813413_-	SINE	Alu	AluSx
CAediting_4180	chr1_3813414_-	SINE	Alu	AluSx
CAediting_4181	chr1_3813420_-	SINE	Alu	AluSx
CAediting_4182	chr1_3813421_-	SINE	Alu	AluSx
CAediting_4183	chr1_3813422_-	SINE	Alu	AluSx
CAediting_4184	chr1_3813423_-	SINE	Alu	AluSx
CAediting_4185	chr1_3813424_-	SINE	Alu	AluSx
CAediting_4186	chr1_3813427_-	SINE	Alu	AluSx
CAediting_4187	chr1_3813438_-	SINE	Alu	AluSx
CAediting_4188	chr1_3813439_-	SINE	Alu	AluSx
CAediting_4189	chr1_3813440_-	SINE	Alu	AluSx
CAediting_4190	chr1_3813448_-	SINE	Alu	AluSx
CAediting_4191	chr1_3813449_-	SINE	Alu	AluSx
CAediting_4192	chr1_3813472_-	SINE	Alu	AluSx
CAediting_4193	chr1_3813501_-	SINE	Alu	AluSx
CAediting_4194	chr1_3813509_-	SINE	Alu	AluSx
CAediting_4195	chr1_3813517_-	SINE	Alu	AluSx
CAediting_4196	chr1_3813518_-	SINE	Alu	AluSx
CAediting_4197	chr1_3813525_-	SINE	Alu	AluSx
CAediting_4198	chr1_3813539_-	SINE	Alu	AluSx
CAediting_4200	chr1_3813572_-	SINE	Alu	AluSx3
CAediting_4201	chr1_3813578_-	SINE	Alu	AluSx3
CAediting_4202	chr1_3813585_-	SINE	Alu	AluSx3
CAediting_4203	chr1_3813594_-	SINE	Alu	AluSx3
CAediting_4204	chr1_3813606_-	SINE	Alu	AluSx3
CAediting_4205	chr1_3813607_-	SINE	Alu	AluSx3
CAediting_4206	chr1_3813621_-	SINE	Alu	AluSx3
CAediting_4207	chr1_3813629_-	SINE	Alu	AluSx3
CAediting_4208	chr1_3813630_-	SINE	Alu	AluSx3
CAediting_4209	chr1_3813637_-	SINE	Alu	AluSx3
CAediting_4210	chr1_3813644_-	SINE	Alu	AluSx3
CAediting_4211	chr1_3813645_-	SINE	Alu	AluSx3
CAediting_4212	chr1_3813657_-	SINE	Alu	AluSx3
CAediting_4213	chr1_3813679_-	SINE	Alu	AluSx3
CAediting_4214	chr1_3813681_-	SINE	Alu	AluSx3
CAediting_4215	chr1_3813683_-	SINE	Alu	AluSx3
CAediting_4216	chr1_3813686_-	SINE	Alu	AluSx3
CAediting_4217	chr1_3813692_-	SINE	Alu	AluSx3
CAediting_4218	chr1_3813701_-	SINE	Alu	AluSx3
CAediting_4219	chr1_3813726_-	SINE	Alu	AluSx3
CAediting_4220	chr1_3813728_-	SINE	Alu	AluSx3
CAediting_4221	chr1_3813738_-	SINE	Alu	AluSx3
CAediting_4222	chr1_3813741_-	SINE	Alu	AluSx3
CAediting_4223	chr1_3813750_-	SINE	Alu	AluSx3
CAediting_4224	chr1_3813763_-	SINE	Alu	AluSx3
CAediting_4225	chr1_3813764_-	SINE	Alu	AluSx3
CAediting_4226	chr1_3813767_-	SINE	Alu	AluSx3
CAediting_4227	chr1_3813768_-	SINE	Alu	AluSx3
CAediting_4228	chr1_3813781_-	SINE	Alu	AluSx3
CAediting_4229	chr1_3813787_-	SINE	Alu	AluSx3
CAediting_4230	chr1_3813788_-	SINE	Alu	AluSx3
CAediting_4231	chr1_3813793_-	SINE	Alu	AluSx3
CAediting_4232	chr1_3813803_-	SINE	Alu	AluSx3
CAediting_4233	chr1_3813811_-	SINE	Alu	AluSx3
CAediting_4234	chr1_3813817_-	SINE	Alu	AluSx3
CAediting_4235	chr1_3813836_-	SINE	Alu	AluSx3
CAediting_4236	chr1_3813842_-	SINE	Alu	AluSx3
CAediting_4237	chr1_3813846_-	SINE	Alu	AluSx3
CAediting_4239	chr1_3824247_-	SINE	Alu	AluSp
CAediting_4240	chr1_3826890_-	SINE	Alu	AluJb
CAediting_4241	chr1_3826902_-	SINE	Alu	AluJb
CAediting_4242	chr1_3826903_-	SINE	Alu	AluJb
CAediting_4243	chr1_3826904_-	SINE	Alu	AluJb
CAediting_4244	chr1_3826929_-	SINE	Alu	AluJb
CAediting_4245	chr1_3826945_-	SINE	Alu	AluJb
CAediting_4246	chr1_3826946_-	SINE	Alu	AluJb
CAediting_4247	chr1_3826957_-	SINE	Alu	AluJb
CAediting_4248	chr1_3826985_-	SINE	Alu	AluJb
CAediting_4249	chr1_3826987_-	SINE	Alu	AluJb
CAediting_4250	chr1_3827004_-	SINE	Alu	AluJb
CAediting_4251	chr1_3827005_-	SINE	Alu	AluJb
CAediting_4252	chr1_3827009_-	SINE	Alu	AluJb
CAediting_4253	chr1_3827028_-	SINE	Alu	AluJb
CAediting_4254	chr1_3827040_-	SINE	Alu	AluJb
CAediting_4255	chr1_3827076_-	SINE	Alu	AluJb
CAediting_4256	chr1_3827261_-	SINE	Alu	AluJb
CAediting_4257	chr1_3827307_-	SINE	Alu	AluJb
CAediting_4258	chr1_3827352_-	SINE	Alu	AluJb
CAediting_4259	chr1_3827353_-	SINE	Alu	AluJb
CAediting_4260	chr1_3827375_-	SINE	Alu	AluJb
CAediting_4261	chr1_3827379_-	SINE	Alu	AluJb
CAediting_4262	chr1_3827383_-	SINE	Alu	AluJb
CAediting_4263	chr1_3827439_-	SINE	Alu	AluJb
CAediting_4264	chr1_3827444_-	SINE	Alu	AluJb
CAediting_4265	chr1_3827445_-	SINE	Alu	AluJb
CAediting_4266	chr1_3827447_-	SINE	Alu	AluJb
CAediting_4267	chr1_3827452_-	SINE	Alu	AluJb
CAediting_4268	chr1_3827457_-	SINE	Alu	AluJb
CAediting_4269	chr1_3827501_-	SINE	Alu	AluJb
CAediting_4270	chr1_3840348_-	SINE	Alu	AluSz
CAediting_4271	chr1_3842916_-	SINE	Alu	AluSz
CAediting_4272	chr1_3842926_-	SINE	Alu	AluSz
CAediting_4273	chr1_3842970_-	SINE	Alu	AluSz
CAediting_4274	chr1_3843044_-	SINE	Alu	AluSz
CAediting_4275	chr1_3843439_-	SINE	Alu	AluJo
CAediting_4276	chr1_3843633_-	SINE	Alu	AluJo
CAediting_4277	chr1_3844347_-	SINE	Alu	AluSq2
CAediting_4278	chr1_3847865_-	SINE	Alu	AluSx1
CAediting_4279	chr1_3847867_-	SINE	Alu	AluSx1
CAediting_4280	chr1_3847873_-	SINE	Alu	AluSx1
CAediting_4281	chr1_3847903_-	SINE	Alu	AluSx1
CAediting_4282	chr1_3847907_-	SINE	Alu	AluSx1
CAediting_4283	chr1_3847943_-	SINE	Alu	AluSx1
CAediting_4284	chr1_3847972_-	SINE	Alu	AluSx1
CAediting_4285	chr1_3847975_-	SINE	Alu	AluSx1
CAediting_4286	chr1_3847991_-	SINE	Alu	AluSx1
CAediting_4287	chr1_3848008_-	SINE	Alu	AluSx1
CAediting_4288	chr1_3848017_-	SINE	Alu	AluSx1
CAediting_4289	chr1_3853929_-	SINE	Alu	FLAM_C
CAediting_4290	chr1_3855306_-	SINE	Alu	AluJr4
CAediting_4291	chr1_3855346_-	SINE	Alu	AluJr4

Top

RNA A-to-I editing events in the alternative splicing sites for CEP104

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_4158	chr1_3813293_-	3813289:3813311	3SS	0+2i	GCCATTGCACTCCAGCCCAGGCG	0.21	GCCATTGCACTCCAGCCCGGGCG	-7.74
IR	CAediting_4159	chr1_3813298_-	3813289:3813311	3SS	0+7i	GCCATTGCACTCCAGCCCAGGCG	0.21	GCCATTGCACTCCGGCCCAGGCG	4.15
IR	CAediting_4160	chr1_3813303_-	3813289:3813311	3SS	0+12i	GCCATTGCACTCCAGCCCAGGCG	0.21	GCCATTGCGCTCCAGCCCAGGCG	0.45
IR	CAediting_4161	chr1_3813308_-	3813289:3813311	3SS	0+17i	GCCATTGCACTCCAGCCCAGGCG	0.21	GCCGTTGCACTCCAGCCCAGGCG	0.88
IR	CAediting_4237	chr1_3813846_-	3813843:3813851	5SS	0+3i	TTGCGACGG	-9.36	TTGCGGCGG	-12.12

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000116198.11.CEP104.

Correlation between RNA A-to-I editing and PSI for ENSG00000116198.11.CEP104.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEP104

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

GBM.CAediting_4148.ENSG00000116198.CEP104.png
Soverview

KIRC.CAediting_4158.ENSG00000116198.CEP104.png
Soverview

OV.CAediting_4168.ENSG00000116198.CEP104.png
Soverview

SKCM.CAediting_4158.ENSG00000116198.CEP104.png
Soverview

THCA.CAediting_4226.ENSG00000116198.CEP104.png
Soverview

UCEC.CAediting_4168.ENSG00000116198.CEP104.png
Soverview

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Protein coding region RNA A-to-I editings for CEP104

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for CEP104

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CEP104

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000378230.6	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_4125	ENST00000378230.6	chr1_3812574_-	-2384.80	-2383.70	-2460.10
CAediting_4126	ENST00000378230.6	chr1_3812581_-	-2383.00	-2383.70	-2460.10
CAediting_4127	ENST00000378230.6	chr1_3812583_-	-2382.70	-2383.70	-2460.10
CAediting_4128	ENST00000378230.6	chr1_3812587_-	-2387.20	-2383.70	-2460.10
CAediting_4129	ENST00000378230.6	chr1_3812595_-	-2389.90	-2383.70	-2460.10
CAediting_4130	ENST00000378230.6	chr1_3812596_-	-2385.60	-2383.70	-2460.10
CAediting_4131	ENST00000378230.6	chr1_3812610_-	-2383.30	-2383.70	-2460.10
CAediting_4132	ENST00000378230.6	chr1_3812614_-	-2383.00	-2383.70	-2460.10
CAediting_4133	ENST00000378230.6	chr1_3812618_-	-2384.40	-2383.70	-2460.10
CAediting_4134	ENST00000378230.6	chr1_3812635_-	-2383.60	-2383.70	-2460.10
CAediting_4135	ENST00000378230.6	chr1_3812646_-	-2383.80	-2383.70	-2460.10
CAediting_4136	ENST00000378230.6	chr1_3812653_-	-2384.20	-2383.70	-2460.10
CAediting_4137	ENST00000378230.6	chr1_3812658_-	-2387.50	-2383.70	-2460.10
CAediting_4138	ENST00000378230.6	chr1_3812668_-	-2384.20	-2383.70	-2460.10
CAediting_4139	ENST00000378230.6	chr1_3812670_-	-2382.80	-2383.70	-2460.10
CAediting_4140	ENST00000378230.6	chr1_3812672_-	-2383.60	-2383.70	-2460.10
CAediting_4141	ENST00000378230.6	chr1_3812675_-	-2386.90	-2383.70	-2460.10
CAediting_4142	ENST00000378230.6	chr1_3812681_-	-2384.30	-2383.70	-2460.10
CAediting_4143	ENST00000378230.6	chr1_3812691_-	-2383.20	-2383.70	-2460.10
CAediting_4144	ENST00000378230.6	chr1_3812718_-	-2384.10	-2383.70	-2460.10
CAediting_4145	ENST00000378230.6	chr1_3812728_-	-2385.50	-2383.70	-2460.10
CAediting_4146	ENST00000378230.6	chr1_3812731_-	-2387.30	-2383.70	-2460.10
CAediting_4147	ENST00000378230.6	chr1_3812740_-	-2387.80	-2383.70	-2460.10
CAediting_4148	ENST00000378230.6	chr1_3812753_-	-2382.90	-2383.70	-2460.10
CAediting_4149	ENST00000378230.6	chr1_3812757_-	-2383.30	-2383.70	-2460.10
CAediting_4150	ENST00000378230.6	chr1_3812777_-	-2383.70	-2383.70	-2460.10
CAediting_4151	ENST00000378230.6	chr1_3812778_-	-2383.00	-2383.70	-2460.10
CAediting_4152	ENST00000378230.6	chr1_3812793_-	-2383.70	-2383.70	-2460.10
CAediting_4153	ENST00000378230.6	chr1_3812814_-	-2386.90	-2383.70	-2460.10
CAediting_4154	ENST00000378230.6	chr1_3812836_-	-2390.90	-2383.70	-2460.10
CAediting_4155	ENST00000378230.6	chr1_3813086_-	-2383.40	-2383.70	-2460.10
CAediting_4156	ENST00000378230.6	chr1_3813280_-	-2382.80	-2383.70	-2460.10
CAediting_4157	ENST00000378230.6	chr1_3813286_-	-2383.00	-2383.70	-2460.10
CAediting_4158	ENST00000378230.6	chr1_3813293_-	-2389.90	-2383.70	-2460.10
CAediting_4159	ENST00000378230.6	chr1_3813298_-	-2383.00	-2383.70	-2460.10
CAediting_4160	ENST00000378230.6	chr1_3813303_-	-2383.30	-2383.70	-2460.10
CAediting_4161	ENST00000378230.6	chr1_3813308_-	-2383.30	-2383.70	-2460.10
CAediting_4162	ENST00000378230.6	chr1_3813313_-	-2380.30	-2383.70	-2460.10
CAediting_4163	ENST00000378230.6	chr1_3813318_-	-2383.70	-2383.70	-2460.10
CAediting_4164	ENST00000378230.6	chr1_3813323_-	-2382.80	-2383.70	-2460.10
CAediting_4165	ENST00000378230.6	chr1_3813347_-	-2383.70	-2383.70	-2460.10
CAediting_4166	ENST00000378230.6	chr1_3813348_-	-2383.20	-2383.70	-2460.10
CAediting_4167	ENST00000378230.6	chr1_3813356_-	-2383.70	-2383.70	-2460.10
CAediting_4168	ENST00000378230.6	chr1_3813358_-	-2390.10	-2383.70	-2460.10
CAediting_4169	ENST00000378230.6	chr1_3813359_-	-2382.80	-2383.70	-2460.10
CAediting_4170	ENST00000378230.6	chr1_3813362_-	-2383.00	-2383.70	-2460.10
CAediting_4171	ENST00000378230.6	chr1_3813366_-	-2382.80	-2383.70	-2460.10
CAediting_4172	ENST00000378230.6	chr1_3813372_-	-2382.80	-2383.70	-2460.10
CAediting_4173	ENST00000378230.6	chr1_3813374_-	-2390.60	-2383.70	-2460.10
CAediting_4174	ENST00000378230.6	chr1_3813383_-	-2383.00	-2383.70	-2460.10
CAediting_4175	ENST00000378230.6	chr1_3813389_-	-2383.30	-2383.70	-2460.10
CAediting_4176	ENST00000378230.6	chr1_3813405_-	-2388.90	-2383.70	-2460.10
CAediting_4177	ENST00000378230.6	chr1_3813409_-	-2383.70	-2383.70	-2460.10
CAediting_4178	ENST00000378230.6	chr1_3813412_-	-2383.70	-2383.70	-2460.10
CAediting_4179	ENST00000378230.6	chr1_3813413_-	-2383.80	-2383.70	-2460.10
CAediting_4180	ENST00000378230.6	chr1_3813414_-	-2383.80	-2383.70	-2460.10
CAediting_4181	ENST00000378230.6	chr1_3813420_-	-2383.70	-2383.70	-2460.10
CAediting_4182	ENST00000378230.6	chr1_3813421_-	-2383.80	-2383.70	-2460.10
CAediting_4183	ENST00000378230.6	chr1_3813422_-	-2383.80	-2383.70	-2460.10
CAediting_4184	ENST00000378230.6	chr1_3813423_-	-2383.80	-2383.70	-2460.10
CAediting_4185	ENST00000378230.6	chr1_3813424_-	-2383.80	-2383.70	-2460.10
CAediting_4186	ENST00000378230.6	chr1_3813427_-	-2383.70	-2383.70	-2460.10
CAediting_4187	ENST00000378230.6	chr1_3813438_-	-2383.70	-2383.70	-2460.10
CAediting_4188	ENST00000378230.6	chr1_3813439_-	-2383.80	-2383.70	-2460.10
CAediting_4189	ENST00000378230.6	chr1_3813440_-	-2383.20	-2383.70	-2460.10
CAediting_4190	ENST00000378230.6	chr1_3813448_-	-2383.70	-2383.70	-2460.10
CAediting_4191	ENST00000378230.6	chr1_3813449_-	-2383.40	-2383.70	-2460.10
CAediting_4192	ENST00000378230.6	chr1_3813472_-	-2383.00	-2383.70	-2460.10
CAediting_4193	ENST00000378230.6	chr1_3813501_-	-2382.80	-2383.70	-2460.10
CAediting_4194	ENST00000378230.6	chr1_3813509_-	-2383.30	-2383.70	-2460.10
CAediting_4195	ENST00000378230.6	chr1_3813517_-	-2383.70	-2383.70	-2460.10
CAediting_4196	ENST00000378230.6	chr1_3813518_-	-2383.80	-2383.70	-2460.10
CAediting_4197	ENST00000378230.6	chr1_3813525_-	-2383.30	-2383.70	-2460.10
CAediting_4198	ENST00000378230.6	chr1_3813539_-	-2387.90	-2383.70	-2460.10
CAediting_4199	ENST00000378230.6	chr1_3813549_-	-2383.70	-2383.70	-2460.10
CAediting_4200	ENST00000378230.6	chr1_3813572_-	-2384.90	-2383.70	-2460.10
CAediting_4201	ENST00000378230.6	chr1_3813578_-	-2389.10	-2383.70	-2460.10
CAediting_4202	ENST00000378230.6	chr1_3813585_-	-2382.80	-2383.70	-2460.10
CAediting_4203	ENST00000378230.6	chr1_3813594_-	-2383.70	-2383.70	-2460.10
CAediting_4204	ENST00000378230.6	chr1_3813606_-	-2383.40	-2383.70	-2460.10
CAediting_4205	ENST00000378230.6	chr1_3813607_-	-2383.80	-2383.70	-2460.10
CAediting_4206	ENST00000378230.6	chr1_3813621_-	-2389.10	-2383.70	-2460.10
CAediting_4207	ENST00000378230.6	chr1_3813629_-	-2386.90	-2383.70	-2460.10
CAediting_4208	ENST00000378230.6	chr1_3813630_-	-2385.70	-2383.70	-2460.10
CAediting_4209	ENST00000378230.6	chr1_3813637_-	-2383.10	-2383.70	-2460.10
CAediting_4210	ENST00000378230.6	chr1_3813644_-	-2383.70	-2383.70	-2460.10
CAediting_4211	ENST00000378230.6	chr1_3813645_-	-2383.20	-2383.70	-2460.10
CAediting_4212	ENST00000378230.6	chr1_3813657_-	-2383.00	-2383.70	-2460.10
CAediting_4213	ENST00000378230.6	chr1_3813679_-	-2383.10	-2383.70	-2460.10
CAediting_4214	ENST00000378230.6	chr1_3813681_-	-2382.80	-2383.70	-2460.10
CAediting_4215	ENST00000378230.6	chr1_3813683_-	-2383.40	-2383.70	-2460.10
CAediting_4216	ENST00000378230.6	chr1_3813686_-	-2383.40	-2383.70	-2460.10
CAediting_4217	ENST00000378230.6	chr1_3813692_-	-2383.70	-2383.70	-2460.10
CAediting_4218	ENST00000378230.6	chr1_3813701_-	-2384.00	-2383.70	-2460.10
CAediting_4219	ENST00000378230.6	chr1_3813726_-	-2383.00	-2383.70	-2460.10
CAediting_4220	ENST00000378230.6	chr1_3813728_-	-2383.70	-2383.70	-2460.10
CAediting_4221	ENST00000378230.6	chr1_3813738_-	-2383.40	-2383.70	-2460.10
CAediting_4222	ENST00000378230.6	chr1_3813741_-	-2383.80	-2383.70	-2460.10
CAediting_4223	ENST00000378230.6	chr1_3813750_-	-2383.00	-2383.70	-2460.10
CAediting_4224	ENST00000378230.6	chr1_3813763_-	-2383.70	-2383.70	-2460.10
CAediting_4225	ENST00000378230.6	chr1_3813764_-	-2383.40	-2383.70	-2460.10
CAediting_4226	ENST00000378230.6	chr1_3813767_-	-2383.40	-2383.70	-2460.10
CAediting_4227	ENST00000378230.6	chr1_3813768_-	-2383.40	-2383.70	-2460.10
CAediting_4228	ENST00000378230.6	chr1_3813781_-	-2383.30	-2383.70	-2460.10
CAediting_4229	ENST00000378230.6	chr1_3813787_-	-2383.70	-2383.70	-2460.10
CAediting_4230	ENST00000378230.6	chr1_3813788_-	-2382.80	-2383.70	-2460.10
CAediting_4231	ENST00000378230.6	chr1_3813793_-	-2382.50	-2383.70	-2460.10
CAediting_4232	ENST00000378230.6	chr1_3813803_-	-2383.10	-2383.70	-2460.10
CAediting_4233	ENST00000378230.6	chr1_3813811_-	-2383.70	-2383.70	-2460.10
CAediting_4234	ENST00000378230.6	chr1_3813817_-	-2383.70	-2383.70	-2460.10
CAediting_4235	ENST00000378230.6	chr1_3813836_-	-2389.10	-2383.70	-2460.10
CAediting_4236	ENST00000378230.6	chr1_3813842_-	-2382.80	-2383.70	-2460.10
CAediting_4237	ENST00000378230.6	chr1_3813846_-	-2383.10	-2383.70	-2460.10
CAediting_4238	ENST00000378230.6	chr1_3814226_-	-2383.70	-2383.70	-2460.10

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Relation with ADAR for CEP104

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
GBM	CAediting_4148	chr1_3812753_-	0.000888671634808509	0.353987311274657	.	.	.	.
LUAD	CAediting_4155	chr1_3813086_-	0.00141406645601226	0.338890744825315	.	.	.	.
BLCA	CAediting_4158	chr1_3813293_-	0.000841899398265336	0.441110065433329	.	.	.	.
LGG	CAediting_4158	chr1_3813293_-	4.2870934634384e-05	0.249941480128255	.	.	.	.
BRCA	CAediting_4158	chr1_3813293_-	1.26964158221954e-19	0.434034180923488	.	.	.	.
CESC	CAediting_4158	chr1_3813293_-	0.0031320820950648	0.332495852429796	.	.	.	.
LUAD	CAediting_4158	chr1_3813293_-	3.97581831073592e-05	0.343452782862426	.	.	.	.
COAD	CAediting_4158	chr1_3813293_-	2.59491586785916e-05	0.548135697169753	.	.	.	.
LUSC	CAediting_4158	chr1_3813293_-	0.00554466899908821	0.294976188104823	.	.	.	.
GBM	CAediting_4158	chr1_3813293_-	0.0235489375787228	0.251452102575517	.	.	.	.
PRAD	CAediting_4158	chr1_3813293_-	0.000106040250111609	0.244141302162401	.	.	.	.
HNSC	CAediting_4158	chr1_3813293_-	0.000160741530649059	0.468352370622088	.	.	.	.
STAD	CAediting_4158	chr1_3813293_-	0.00184712179149101	0.253895671646748	.	.	.	.
THCA	CAediting_4158	chr1_3813293_-	1.10689793451669e-05	0.249924663018087	.	.	.	.
KIRC	CAediting_4158	chr1_3813293_-	2.00989999236433e-05	0.265090500649559	.	.	.	.
OV	CAediting_4158	chr1_3813293_-	1.29127582172532e-05	0.328581303061871	.	.	.	.
SKCM	CAediting_4158	chr1_3813293_-	9.04870342168372e-08	0.491093242219217	.	.	.	.
SARC	CAediting_4158	chr1_3813293_-	0.00177603523916665	0.419322090789172	.	.	.	.
LUAD	CAediting_4160	chr1_3813303_-	0.0398842588417337	0.261736315664133	.	.	.	.
THCA	CAediting_4160	chr1_3813303_-	0.00981932503071791	0.283621294043008	.	.	.	.
BRCA	CAediting_4161	chr1_3813308_-	0.0304933728691439	0.172755890715004	.	.	.	.
LUAD	CAediting_4161	chr1_3813308_-	0.0111012242797053	0.334042147013728	.	.	.	.
KIRC	CAediting_4161	chr1_3813308_-	0.00978223217418441	0.266627474454772	.	.	.	.
BLCA	CAediting_4165	chr1_3813347_-	0.0127240092710473	0.277422605810538	.	.	.	.
BRCA	CAediting_4165	chr1_3813347_-	1.14313338626007e-09	0.27137824801975	.	.	.	.
CESC	CAediting_4165	chr1_3813347_-	0.00334300800282942	0.306119688070044	.	.	.	.
LUAD	CAediting_4165	chr1_3813347_-	2.01216794963719e-07	0.374798809290532	.	.	.	.
LUSC	CAediting_4165	chr1_3813347_-	0.0353467696722713	0.218523103707239	.	.	.	.
PRAD	CAediting_4165	chr1_3813347_-	0.00109161388971457	0.203764524775139	.	.	.	.
THCA	CAediting_4165	chr1_3813347_-	0.00498580583786155	0.160661349771141	.	.	.	.
KIRC	CAediting_4165	chr1_3813347_-	0.0166642769113435	0.145058988577729	.	.	.	.
UCEC	CAediting_4165	chr1_3813347_-	0.00883753948017308	0.3630306710532	.	.	.	.
SKCM	CAediting_4165	chr1_3813347_-	2.15136884026017e-06	0.379365452804187	.	.	.	.
SARC	CAediting_4165	chr1_3813347_-	0.000355548812274384	0.414883935849636	.	.	.	.
BRCA	CAediting_4167	chr1_3813356_-	0.000488862389927186	0.208888338109526	.	.	.	.
PRAD	CAediting_4167	chr1_3813356_-	0.031106389065447	0.156049143091555	.	.	.	.
BLCA	CAediting_4168	chr1_3813358_-	0.0242378963151496	0.241488513788383	.	.	.	.
BRCA	CAediting_4168	chr1_3813358_-	7.58151909232259e-14	0.348610356954615	.	.	.	.
LUAD	CAediting_4168	chr1_3813358_-	1.27789159255316e-06	0.363509265517409	.	.	.	.
LUSC	CAediting_4168	chr1_3813358_-	8.15362187187859e-05	0.376563220666421	0.0113704559032595	0.247315781431337	.	.
PRAD	CAediting_4168	chr1_3813358_-	0.00307714429096677	0.175668523375036	.	.	.	.
THCA	CAediting_4168	chr1_3813358_-	0.000145116453637588	0.201710447086492	.	.	.	.
KIRC	CAediting_4168	chr1_3813358_-	0.00202661989533361	0.195470496421606	.	.	.	.
UCEC	CAediting_4168	chr1_3813358_-	0.0157302527623821	0.291878813555565	.	.	.	.
OV	CAediting_4168	chr1_3813358_-	0.00902211685552111	0.253682249428204	.	.	.	.
SKCM	CAediting_4168	chr1_3813358_-	4.2714400400171e-07	0.414665619923291	.	.	.	.
SARC	CAediting_4168	chr1_3813358_-	0.00414873049849362	0.377309703913709	.	.	.	.
THYM	CAediting_4168	chr1_3813358_-	.	.	.	.	0.0420549157960935	0.265579673724053
CESC	CAediting_4170	chr1_3813362_-	0.00265789104181503	0.314814092122227	.	.	.	.
THCA	CAediting_4170	chr1_3813362_-	0.0392427505170134	0.11105405086808	.	.	.	.
UCEC	CAediting_4170	chr1_3813362_-	0.0068212386341717	0.318329481416394	.	.	.	.
SARC	CAediting_4170	chr1_3813362_-	0.0202875263689203	0.294196833239621	.	.	.	.
BRCA	CAediting_4171	chr1_3813366_-	0.0123116760731843	0.243502071459309	.	.	.	.
BRCA	CAediting_4195	chr1_3813517_-	1.24399938415512e-05	0.360072833372413	.	.	.	.
PRAD	CAediting_4195	chr1_3813517_-	0.0356394575154506	0.26958244585386	.	.	.	.
BRCA	CAediting_4196	chr1_3813518_-	3.83977670303196e-10	0.493360495755687	.	.	.	.
PRAD	CAediting_4196	chr1_3813518_-	0.00100217434781194	0.395845710718452	.	.	.	.
BRCA	CAediting_4201	chr1_3813578_-	6.88246596273529e-06	0.324728205604589	.	.	.	.
BRCA	CAediting_4203	chr1_3813594_-	3.71640863558659e-08	0.478478513463978	.	.	.	.
BRCA	CAediting_4206	chr1_3813621_-	0.000889412730261924	0.418010169925308	.	.	.	.
BRCA	CAediting_4208	chr1_3813630_-	0.00583682740003208	0.338356829679237	.	.	.	.
BRCA	CAediting_4215	chr1_3813683_-	0.0054851077860793	0.315597622353444	.	.	.	.
BRCA	CAediting_4216	chr1_3813686_-	0.00134147713893127	0.334802436256482	.	.	.	.
LGG	CAediting_4221	chr1_3813738_-	8.51315398429175e-06	0.434942231341963	.	.	.	.
BRCA	CAediting_4221	chr1_3813738_-	1.27799804272256e-10	0.399697525239354	.	.	.	.
PRAD	CAediting_4221	chr1_3813738_-	0.0302519511754485	0.229842603703981	.	.	.	.
THCA	CAediting_4221	chr1_3813738_-	.	.	.	.	0.00502724658502012	0.274433993747055
KIRC	CAediting_4221	chr1_3813738_-	0.0235683218469083	0.195527922756096	.	.	.	.
SKCM	CAediting_4221	chr1_3813738_-	0.00307952852746724	0.341806393718332	.	.	.	.
BLCA	CAediting_4222	chr1_3813741_-	4.52854090922519e-06	0.438414858379077	.	.	.	.
LGG	CAediting_4222	chr1_3813741_-	1.02274509693548e-07	0.287030621889256	.	.	.	.
BRCA	CAediting_4222	chr1_3813741_-	1.02868487345722e-19	0.384675488749195	.	.	.	.
CESC	CAediting_4222	chr1_3813741_-	0.0243956799867575	0.210759324898093	.	.	.	.
LUAD	CAediting_4222	chr1_3813741_-	1.0122983590138e-05	0.309524992305887	.	.	.	.
LUSC	CAediting_4222	chr1_3813741_-	0.000239450551957424	0.332041894641169	.	.	.	.
HNSC	CAediting_4222	chr1_3813741_-	0.021255520914507	0.204254742735637	0.0199574512109493	0.206313949613705	.	.
STAD	CAediting_4222	chr1_3813741_-	0.0476862506106348	0.254604874317297	.	.	.	.
THCA	CAediting_4222	chr1_3813741_-	4.44063915043583e-05	0.221151077939351	.	.	.	.
PCPG	CAediting_4222	chr1_3813741_-	0.0016866966400976	0.38205071818583	.	.	.	.
SKCM	CAediting_4222	chr1_3813741_-	1.82322927760666e-06	0.348840506724803	.	.	.	.
SARC	CAediting_4222	chr1_3813741_-	0.00799578409411997	0.276413032113947	.	.	.	.
THYM	CAediting_4222	chr1_3813741_-	0.00893201964481074	0.30817953503208	.	.	.	.
LGG	CAediting_4223	chr1_3813750_-	0.0330465515581465	0.1475172513778	.	.	.	.
BRCA	CAediting_4223	chr1_3813750_-	4.4670099157894e-07	0.231769461680835	.	.	.	.
LUAD	CAediting_4223	chr1_3813750_-	0.00868331124147196	0.224226677892108	.	.	.	.
LUSC	CAediting_4223	chr1_3813750_-	.	.	0.0496948462434972	0.203027770651064	.	.
KIRC	CAediting_4223	chr1_3813750_-	0.00615292359463562	0.167257913145801	.	.	.	.
UCEC	CAediting_4223	chr1_3813750_-	0.00807491887527481	0.341722694371011	.	.	.	.
OV	CAediting_4223	chr1_3813750_-	1.99755633068815e-05	0.489173236208753	.	.	.	.
SKCM	CAediting_4223	chr1_3813750_-	0.0100673116969933	0.250137077091323	.	.	.	.
BRCA	CAediting_4224	chr1_3813763_-	7.04035266439713e-06	0.228754072118773	.	.	.	.
GBM	CAediting_4224	chr1_3813763_-	0.00371166922249392	0.250892578109883	.	.	.	.
PRAD	CAediting_4224	chr1_3813763_-	0.00566648706713029	0.183074050910355	.	.	.	.
HNSC	CAediting_4224	chr1_3813763_-	0.00405690715500978	0.395645773317989	.	.	.	.
STAD	CAediting_4224	chr1_3813763_-	0.000178533498490462	0.336994089632439	.	.	.	.
THCA	CAediting_4224	chr1_3813763_-	0.000202334110296639	0.221894217864204	.	.	.	.
KIRC	CAediting_4224	chr1_3813763_-	8.80923455104993e-05	0.257287603777435	.	.	.	.
SKCM	CAediting_4224	chr1_3813763_-	0.00143952990137482	0.319181347209141	.	.	.	.
BRCA	CAediting_4225	chr1_3813764_-	0.0267208229001009	0.198187831219906	.	.	.	.
BRCA	CAediting_4226	chr1_3813767_-	0.000223382620518088	0.175891321336551	.	.	.	.
COAD	CAediting_4226	chr1_3813767_-	0.0372203042846552	0.261028601731842	.	.	.	.
LUSC	CAediting_4226	chr1_3813767_-	0.00217104776868084	0.306146431300409	.	.	.	.
PRAD	CAediting_4226	chr1_3813767_-	0.000328877160403557	0.21578658971291	.	.	.	.
STAD	CAediting_4226	chr1_3813767_-	0.0242826770299774	0.204735117501483	.	.	.	.
THCA	CAediting_4226	chr1_3813767_-	0.00139214769631988	0.177396478325704	.	.	.	.
UCEC	CAediting_4226	chr1_3813767_-	0.032134250027353	0.204473993994489	.	.	.	.
SKCM	CAediting_4226	chr1_3813767_-	0.00760927726357017	0.236736964051232	.	.	.	.
BLCA	CAediting_4227	chr1_3813768_-	0.0276119504569073	0.308528460624254	.	.	.	.
BRCA	CAediting_4227	chr1_3813768_-	2.13470964498345e-05	0.214234984440449	.	.	.	.
LUSC	CAediting_4227	chr1_3813768_-	0.0265081860479035	0.237882890121944	.	.	.	.
HNSC	CAediting_4227	chr1_3813768_-	0.0169737922354732	0.323643292996618	.	.	.	.
BRCA	CAediting_4229	chr1_3813787_-	2.43460390080593e-06	0.269563939899375	.	.	.	.
LUAD	CAediting_4229	chr1_3813787_-	0.00660173959678979	0.253038698089919	.	.	.	.
OV	CAediting_4229	chr1_3813787_-	0.00757528579240207	0.29467584880422	.	.	.	.
BRCA	CAediting_4233	chr1_3813811_-	.	.	0.000561343649797621	0.366484116202036	.	.
BLCA	CAediting_4235	chr1_3813836_-	0.00291337692433044	0.182529828925808	.	.	.	.
LGG	CAediting_4235	chr1_3813836_-	0.042930810009963	0.0905736815772684	.	.	.	.
BRCA	CAediting_4235	chr1_3813836_-	8.6389368318987e-11	0.20699859227326	.	.	.	.
CESC	CAediting_4235	chr1_3813836_-	0.00392949098434862	0.185114079862926	.	.	.	.
LUAD	CAediting_4235	chr1_3813836_-	0.000258918021888541	0.179719855702813	.	.	.	.
COAD	CAediting_4235	chr1_3813836_-	0.00761005002222316	0.167435180962527	.	.	.	.
LUSC	CAediting_4235	chr1_3813836_-	4.8222395863573e-06	0.233926578509785	.	.	.	.
GBM	CAediting_4235	chr1_3813836_-	0.0283553764532464	0.177287170682798	.	.	.	.
PRAD	CAediting_4235	chr1_3813836_-	0.00246101067380143	0.142888455085827	.	.	.	.
HNSC	CAediting_4235	chr1_3813836_-	8.24964045090526e-05	0.219635344258172	.	.	.	.
STAD	CAediting_4235	chr1_3813836_-	0.000562343326477901	0.233870847773452	.	.	.	.
THCA	CAediting_4235	chr1_3813836_-	0.0039134492486976	0.133123685225949	.	.	.	.
KIRC	CAediting_4235	chr1_3813836_-	0.000590578610028419	0.157084214218516	.	.	.	.
UCEC	CAediting_4235	chr1_3813836_-	0.00296877499021353	0.186069742120278	.	.	.	.
KIRP	CAediting_4235	chr1_3813836_-	0.0251116239500167	0.150992668845107	.	.	.	.
PAAD	CAediting_4235	chr1_3813836_-	0.0394297607397569	0.173067119871293	.	.	.	.
PCPG	CAediting_4235	chr1_3813836_-	0.027295326822177	0.18792712915087	.	.	.	.
SKCM	CAediting_4235	chr1_3813836_-	1.65196355758471e-07	0.275748614507523	.	.	.	.
READ	CAediting_4235	chr1_3813836_-	0.00723511654475949	0.287679807365037	.	.	.	.
LUAD	CAediting_4238	chr1_3814226_-	1.26927156418614e-07	0.507995022438436	.	.	.	.

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Relation with cancer stages for CEP104

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_4224	chr1_3813763_-	0.0358399456559801	0.286292935649542
BRCA	pathologic_stage	CAediting_4201	chr1_3813578_-	0.0195124499508652	0.173486688716642
BRCA	pathologic_stage	CAediting_4223	chr1_3813750_-	0.0162968419764236	0.112568316566649
BRCA	pathologic_stage	CAediting_4229	chr1_3813787_-	0.0059067887463122	0.160742522739619
CESC	clinical_stage	CAediting_4235	chr1_3813836_-	0.00827675192486851	-0.171884240180327
HNSC	clinical_stage	CAediting_4229	chr1_3813787_-	0.00787646656644308	-0.368062052438252
HNSC	pathologic_stage	CAediting_4165	chr1_3813347_-	0.0110588442594656	0.25186766569543
HNSC	pathologic_stage	CAediting_4229	chr1_3813787_-	0.000537135617491053	-0.495582232097826
KIRC	pathologic_stage	CAediting_4167	chr1_3813356_-	0.0406950777598681	0.150632052311274
KIRC	pathologic_stage	CAediting_4168	chr1_3813358_-	0.0233303052350317	0.14428420864493
KIRC	pathologic_stage	CAediting_4195	chr1_3813517_-	0.0119695559912287	0.325182666233153
KIRC	pathologic_stage	CAediting_4201	chr1_3813578_-	0.0233189533930148	0.21234485367613
KIRC	pathologic_stage	CAediting_4235	chr1_3813836_-	1.75799869031116e-05	0.196020096600573
KIRC	pathologic_stage	CAediting_4238	chr1_3814226_-	0.000699500350871725	0.375717550428519
KIRP	clinical_stage	CAediting_4170	chr1_3813362_-	0.00987234389866193	0.288695038277932
KIRP	clinical_stage	CAediting_4222	chr1_3813741_-	0.0393050000588133	0.212977993048117
KIRP	clinical_stage	CAediting_4235	chr1_3813836_-	0.00117359643853991	0.263367167558755
KIRP	pathologic_stage	CAediting_4170	chr1_3813362_-	0.00160531530651759	0.310014629832574
KIRP	pathologic_stage	CAediting_4222	chr1_3813741_-	0.0101229518065411	0.232024012624647
KIRP	pathologic_stage	CAediting_4223	chr1_3813750_-	0.0144735746727095	0.272485534912319
KIRP	pathologic_stage	CAediting_4235	chr1_3813836_-	4.63770677818434e-05	0.283849506270885
LUAD	pathologic_stage	CAediting_4235	chr1_3813836_-	0.00803296256235309	0.132199945628557
SKCM	pathologic_stage	CAediting_4158	chr1_3813293_-	0.032987082092029	-0.22377020234635
THCA	pathologic_stage	CAediting_4158	chr1_3813293_-	0.0161559677889701	0.139012531202486
THCA	pathologic_stage	CAediting_4221	chr1_3813738_-	0.00307966955980364	0.288905501817111
THCA	pathologic_stage	CAediting_4229	chr1_3813787_-	0.0407144276303949	0.188701583536493
UCEC	clinical_stage	CAediting_4223	chr1_3813750_-	0.0433091186334182	-0.264035533295598
UCEC	clinical_stage	CAediting_4224	chr1_3813763_-	0.00524281578295882	-0.285738195317393

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Relation with survival for CEP104

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
CESC	CAediting_4165	chr1_3813347_-	0.0121085448118237	0.025711	0.0011252
COAD	CAediting_4226	chr1_3813767_-	0.0273727292087454	0.0223605	1.48133e-05
HNSC	CAediting_4170	chr1_3813362_-	0.00384455654993132	0.01737	12.9411
KIRP	CAediting_4235	chr1_3813836_-	0.0144217426836876	0.00390107	6265.4
ESCA	CAediting_4226	chr1_3813767_-	0.0319040064233275	0.0062089	222.084

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RelatedDrugs for CEP104

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CEP104

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
CEP104	C0431399	Familial aplasia of the vermis	1	GENOMICS_ENGLAND;ORPHANET
CEP104	C3553264	JOUBERT SYNDROME 17	1	GENOMICS_ENGLAND
CEP104	C4084842	JOUBERT SYNDROME 25	1	GENOMICS_ENGLAND
CEP104	C4551568	Joubert syndrome 1	1	ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene