Home

Download

Statistics

Examples

Help

Contact

Editing gene: DEPDC5 (CAeditome ID:9681)

Gene summary for DEPDC5

Gene summary

Gene information	Gene symbol	DEPDC5
	Gene ID	9681
	Gene name	DEP domain containing 5, GATOR1 subcomplex subunit
	Synonyms	DEP.5\|FFEVF\|FFEVF1
	Cytomap	22q12.2-q12.3
	Type of gene	protein-coding
	Description	GATOR complex protein DEPDC5DEP domain-containing protein 5
	Modification date	20210518
	UniProtAcc	O75140
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
DEPDC5	GO:0005096	GATOR complex protein DEPDC5	23723238
DEPDC5	GO:0044877	GATOR complex protein DEPDC5	23723238
DEPDC5	GO:0005764	GATOR complex protein DEPDC5	23723238
DEPDC5	GO:0005765	GATOR complex protein DEPDC5	28199306
DEPDC5	GO:1990130	GATOR complex protein DEPDC5	23723238

Top

RNA A-to-I events for DEPDC5

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000100150.15

RNA A-to-I editing events in Cancer.

CAediting_1476560(31761540, +), CAediting_1476561(31761542, +), CAediting_1476562(31761578, +), CAediting_1476563(31761589, +), CAediting_1476564(31761713, +), CAediting_1476565(31761721, +), CAediting_1476566(31761815, +), CAediting_1476567(31761841, +), CAediting_1476568(31761847, +), CAediting_1476569(31761848, +), CAediting_1476570(31761853, +), CAediting_1476571(31761923, +), CAediting_1476572(31762074, +), CAediting_1476573(31769739, +), CAediting_1476574(31770154, +), CAediting_1476575(31771555, +), CAediting_1476576(31771984, +), CAediting_1476577(31772899, +), CAediting_1476578(31772947, +), CAediting_1476579(31772962, +), CAediting_1476580(31778009, +), CAediting_1476581(31778385, +), CAediting_1476582(31778891, +), CAediting_1476583(31779170, +), CAediting_1476584(31781843, +), CAediting_1476585(31784443, +), CAediting_1476586(31786011, +), CAediting_1476587(31786017, +), CAediting_1476588(31786110, +), CAediting_1476589(31786211, +), CAediting_1476590(31786621, +), CAediting_1476591(31786622, +), CAediting_1476592(31786677, +), CAediting_1476593(31786684, +), CAediting_1476594(31786685, +), CAediting_1476595(31786690, +), CAediting_1476596(31786692, +), CAediting_1476597(31786705, +), CAediting_1476598(31786744, +), CAediting_1476599(31786746, +), CAediting_1476600(31786760, +), CAediting_1476601(31786793, +), CAediting_1476602(31786918, +), CAediting_1476603(31786940, +), CAediting_1476604(31787042, +), CAediting_1476605(31787054, +), CAediting_1476606(31787076, +), CAediting_1476607(31787165, +), CAediting_1476608(31787180, +), CAediting_1476609(31787186, +), CAediting_1476610(31787212, +), CAediting_1476611(31787217, +), CAediting_1476612(31787240, +), CAediting_1476613(31787249, +), CAediting_1476614(31787266, +), CAediting_1476615(31787268, +), CAediting_1476616(31787285, +), CAediting_1476617(31787294, +), CAediting_1476618(31787352, +), CAediting_1476619(31787358, +), CAediting_1476620(31787543, +), CAediting_1476621(31787551, +), CAediting_1476622(31787552, +), CAediting_1476623(31787557, +), CAediting_1476624(31787584, +), CAediting_1476625(31787593, +), CAediting_1476626(31787598, +), CAediting_1476627(31787599, +), CAediting_1476628(31787600, +), CAediting_1476629(31787609, +), CAediting_1476630(31787610, +), CAediting_1476631(31787614, +), CAediting_1476632(31787616, +), CAediting_1476633(31787618, +), CAediting_1476634(31787619, +), CAediting_1476635(31787621, +), CAediting_1476636(31787622, +), CAediting_1476637(31787623, +), CAediting_1476638(31787624, +), CAediting_1476639(31787627, +), CAediting_1476640(31787649, +), CAediting_1476641(31787654, +), CAediting_1476642(31787659, +), CAediting_1476643(31787661, +), CAediting_1476644(31787665, +), CAediting_1476645(31787682, +), CAediting_1476646(31787683, +), CAediting_1476647(31787691, +), CAediting_1476648(31787706, +), CAediting_1476649(31787708, +), CAediting_1476650(31787714, +), CAediting_1476651(31787718, +), CAediting_1476652(31787719, +), CAediting_1476653(31787721, +), CAediting_1476654(31787740, +), CAediting_1476655(31787741, +), CAediting_1476656(31787746, +), CAediting_1476657(31787751, +), CAediting_1476658(31787753, +), CAediting_1476659(31787756, +), CAediting_1476660(31787759, +), CAediting_1476661(31787764, +), CAediting_1476662(31787772, +), CAediting_1476663(31787777, +), CAediting_1476664(31787778, +), CAediting_1476665(31787794, +), CAediting_1476666(31787800, +), CAediting_1476667(31788353, +), CAediting_1476668(31788408, +), CAediting_1476669(31788483, +), CAediting_1476670(31788983, +), CAediting_1476671(31789796, +), CAediting_1476672(31789881, +), CAediting_1476673(31790876, +), CAediting_1476674(31790927, +), CAediting_1476675(31791375, +), CAediting_1476676(31791510, +), CAediting_1476677(31791771, +), CAediting_1476678(31791806, +), CAediting_1476679(31792512, +), CAediting_1476680(31794623, +), CAediting_1476681(31794627, +), CAediting_1476682(31812880, +), CAediting_1476683(31812883, +), CAediting_1476684(31815646, +), CAediting_1476685(31815659, +), CAediting_1476686(31815790, +), CAediting_1476687(31817601, +), CAediting_1476688(31823412, +), CAediting_1476689(31823436, +), CAediting_1476690(31823439, +), CAediting_1476691(31823483, +), CAediting_1476692(31824168, +), CAediting_1476693(31824170, +), CAediting_1476694(31824734, +), CAediting_1476695(31824784, +), CAediting_1476696(31824855, +), CAediting_1476697(31826229, +), CAediting_1476698(31828330, +), CAediting_1476699(31828331, +), CAediting_1476700(31828336, +), CAediting_1476701(31828357, +), CAediting_1476702(31828373, +), CAediting_1476703(31831644, +), CAediting_1476704(31834726, +), CAediting_1476705(31835016, +), CAediting_1476706(31843970, +), CAediting_1476707(31844106, +), CAediting_1476708(31844756, +), CAediting_1476709(31844765, +), CAediting_1476710(31844766, +), CAediting_1476711(31844789, +), CAediting_1476712(31844790, +), CAediting_1476713(31844793, +), CAediting_1476714(31844817, +), CAediting_1476715(31857830, +), CAediting_1476716(31869163, +), CAediting_1476717(31869177, +), CAediting_1476718(31869490, +), CAediting_1476719(31869497, +), CAediting_1476720(31872816, +), CAediting_1476721(31874064, +), CAediting_1476722(31876928, +), CAediting_1476723(31877032, +), CAediting_1476724(31877568, +), CAediting_1476725(31877630, +), CAediting_1476726(31877656, +), CAediting_1476727(31877691, +), CAediting_1476728(31878031, +), CAediting_1476729(31880770, +), CAediting_1476730(31881182, +), CAediting_1476731(31881690, +), CAediting_1476732(31881691, +), CAediting_1476733(31882876, +), CAediting_1476734(31886091, +), CAediting_1476735(31886096, +), CAediting_1476736(31886187, +), CAediting_1476737(31887273, +), CAediting_1476738(31892505, +), CAediting_1476739(31892534, +), CAediting_1476740(31892596, +), CAediting_1476741(31892633, +), CAediting_1476742(31893959, +), CAediting_1476743(31895200, +), CAediting_1476744(31895247, +), CAediting_1476745(31895252, +),

Top

RNA editing positional annotations for DEPDC5 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1476560	chr22_31761540_+	intronic
CAediting_1476561	chr22_31761542_+	intronic
CAediting_1476562	chr22_31761578_+	intronic
CAediting_1476563	chr22_31761589_+	intronic
CAediting_1476564	chr22_31761713_+	intronic
CAediting_1476565	chr22_31761721_+	intronic
CAediting_1476566	chr22_31761815_+	intronic
CAediting_1476567	chr22_31761841_+	intronic
CAediting_1476568	chr22_31761847_+	intronic
CAediting_1476569	chr22_31761848_+	intronic
CAediting_1476570	chr22_31761853_+	intronic
CAediting_1476571	chr22_31761923_+	intronic
CAediting_1476572	chr22_31762074_+	intronic
CAediting_1476573	chr22_31769739_+	intronic
CAediting_1476574	chr22_31770154_+	intronic
CAediting_1476575	chr22_31771555_+	intronic
CAediting_1476576	chr22_31771984_+	intronic
CAediting_1476577	chr22_31772899_+	intronic
CAediting_1476578	chr22_31772947_+	intronic
CAediting_1476579	chr22_31772962_+	intronic
CAediting_1476580	chr22_31778009_+	intronic
CAediting_1476581	chr22_31778385_+	intronic
CAediting_1476582	chr22_31778891_+	intronic
CAediting_1476583	chr22_31779170_+	intronic
CAediting_1476584	chr22_31781843_+	intronic
CAediting_1476585	chr22_31784443_+	intronic
CAediting_1476586	chr22_31786011_+	ncRNA_intronic
CAediting_1476587	chr22_31786017_+	ncRNA_intronic
CAediting_1476588	chr22_31786110_+	ncRNA_intronic
CAediting_1476589	chr22_31786211_+	ncRNA_intronic
CAediting_1476590	chr22_31786621_+	ncRNA_intronic
CAediting_1476591	chr22_31786622_+	ncRNA_intronic
CAediting_1476592	chr22_31786677_+	ncRNA_intronic
CAediting_1476593	chr22_31786684_+	ncRNA_intronic
CAediting_1476594	chr22_31786685_+	ncRNA_intronic
CAediting_1476595	chr22_31786690_+	ncRNA_intronic
CAediting_1476596	chr22_31786692_+	ncRNA_intronic
CAediting_1476597	chr22_31786705_+	ncRNA_intronic
CAediting_1476598	chr22_31786744_+	ncRNA_intronic
CAediting_1476599	chr22_31786746_+	ncRNA_intronic
CAediting_1476600	chr22_31786760_+	ncRNA_intronic
CAediting_1476601	chr22_31786793_+	ncRNA_intronic
CAediting_1476602	chr22_31786918_+	ncRNA_intronic
CAediting_1476603	chr22_31786940_+	ncRNA_intronic
CAediting_1476604	chr22_31787042_+	ncRNA_intronic
CAediting_1476605	chr22_31787054_+	ncRNA_intronic
CAediting_1476606	chr22_31787076_+	ncRNA_intronic
CAediting_1476607	chr22_31787165_+	ncRNA_intronic
CAediting_1476608	chr22_31787180_+	ncRNA_intronic
CAediting_1476609	chr22_31787186_+	ncRNA_intronic
CAediting_1476610	chr22_31787212_+	ncRNA_intronic
CAediting_1476611	chr22_31787217_+	ncRNA_intronic
CAediting_1476612	chr22_31787240_+	ncRNA_intronic
CAediting_1476613	chr22_31787249_+	ncRNA_intronic
CAediting_1476614	chr22_31787266_+	ncRNA_intronic
CAediting_1476615	chr22_31787268_+	ncRNA_intronic
CAediting_1476616	chr22_31787285_+	ncRNA_intronic
CAediting_1476617	chr22_31787294_+	ncRNA_intronic
CAediting_1476618	chr22_31787352_+	ncRNA_intronic
CAediting_1476619	chr22_31787358_+	ncRNA_intronic
CAediting_1476620	chr22_31787543_+	ncRNA_intronic
CAediting_1476621	chr22_31787551_+	ncRNA_intronic
CAediting_1476622	chr22_31787552_+	ncRNA_intronic
CAediting_1476623	chr22_31787557_+	ncRNA_intronic
CAediting_1476624	chr22_31787584_+	ncRNA_intronic
CAediting_1476625	chr22_31787593_+	ncRNA_intronic
CAediting_1476626	chr22_31787598_+	ncRNA_intronic
CAediting_1476627	chr22_31787599_+	ncRNA_intronic
CAediting_1476628	chr22_31787600_+	ncRNA_intronic
CAediting_1476629	chr22_31787609_+	ncRNA_intronic
CAediting_1476630	chr22_31787610_+	ncRNA_intronic
CAediting_1476631	chr22_31787614_+	ncRNA_intronic
CAediting_1476632	chr22_31787616_+	ncRNA_intronic
CAediting_1476633	chr22_31787618_+	ncRNA_intronic
CAediting_1476634	chr22_31787619_+	ncRNA_intronic
CAediting_1476635	chr22_31787621_+	ncRNA_intronic
CAediting_1476636	chr22_31787622_+	ncRNA_intronic
CAediting_1476637	chr22_31787623_+	ncRNA_intronic
CAediting_1476638	chr22_31787624_+	ncRNA_intronic
CAediting_1476639	chr22_31787627_+	ncRNA_intronic
CAediting_1476640	chr22_31787649_+	ncRNA_intronic
CAediting_1476641	chr22_31787654_+	ncRNA_intronic
CAediting_1476642	chr22_31787659_+	ncRNA_intronic
CAediting_1476643	chr22_31787661_+	ncRNA_intronic
CAediting_1476644	chr22_31787665_+	ncRNA_intronic
CAediting_1476645	chr22_31787682_+	ncRNA_intronic
CAediting_1476646	chr22_31787683_+	ncRNA_intronic
CAediting_1476647	chr22_31787691_+	ncRNA_intronic
CAediting_1476648	chr22_31787706_+	ncRNA_intronic
CAediting_1476649	chr22_31787708_+	ncRNA_intronic
CAediting_1476650	chr22_31787714_+	ncRNA_intronic
CAediting_1476651	chr22_31787718_+	ncRNA_intronic
CAediting_1476652	chr22_31787719_+	ncRNA_intronic
CAediting_1476653	chr22_31787721_+	ncRNA_intronic
CAediting_1476654	chr22_31787740_+	ncRNA_intronic
CAediting_1476655	chr22_31787741_+	ncRNA_intronic
CAediting_1476656	chr22_31787746_+	ncRNA_intronic
CAediting_1476657	chr22_31787751_+	ncRNA_intronic
CAediting_1476658	chr22_31787753_+	ncRNA_intronic
CAediting_1476659	chr22_31787756_+	ncRNA_intronic
CAediting_1476660	chr22_31787759_+	ncRNA_intronic
CAediting_1476661	chr22_31787764_+	ncRNA_intronic
CAediting_1476662	chr22_31787772_+	ncRNA_intronic
CAediting_1476663	chr22_31787777_+	ncRNA_intronic
CAediting_1476664	chr22_31787778_+	ncRNA_intronic
CAediting_1476665	chr22_31787794_+	ncRNA_intronic
CAediting_1476666	chr22_31787800_+	ncRNA_intronic
CAediting_1476667	chr22_31788353_+	ncRNA_intronic
CAediting_1476668	chr22_31788408_+	ncRNA_intronic
CAediting_1476669	chr22_31788483_+	ncRNA_intronic
CAediting_1476670	chr22_31788983_+	ncRNA_intronic
CAediting_1476671	chr22_31789796_+	ncRNA_intronic
CAediting_1476672	chr22_31789881_+	ncRNA_intronic
CAediting_1476673	chr22_31790876_+	ncRNA_intronic
CAediting_1476674	chr22_31790927_+	ncRNA_intronic
CAediting_1476675	chr22_31791375_+	ncRNA_intronic
CAediting_1476676	chr22_31791510_+	ncRNA_intronic
CAediting_1476677	chr22_31791771_+	ncRNA_intronic
CAediting_1476678	chr22_31791806_+	ncRNA_intronic
CAediting_1476679	chr22_31792512_+	ncRNA_intronic
CAediting_1476680	chr22_31794623_+	ncRNA_intronic
CAediting_1476681	chr22_31794627_+	ncRNA_intronic
CAediting_1476682	chr22_31812880_+	intronic
CAediting_1476683	chr22_31812883_+	intronic
CAediting_1476684	chr22_31815646_+	UTR3
CAediting_1476685	chr22_31815659_+	UTR3
CAediting_1476686	chr22_31815790_+	UTR3
CAediting_1476687	chr22_31817601_+	intronic
CAediting_1476688	chr22_31823412_+	intronic
CAediting_1476689	chr22_31823436_+	intronic
CAediting_1476690	chr22_31823439_+	intronic
CAediting_1476691	chr22_31823483_+	intronic
CAediting_1476692	chr22_31824168_+	intronic
CAediting_1476693	chr22_31824170_+	intronic
CAediting_1476694	chr22_31824734_+	intronic
CAediting_1476695	chr22_31824784_+	intronic
CAediting_1476696	chr22_31824855_+	intronic
CAediting_1476697	chr22_31826229_+	intronic
CAediting_1476698	chr22_31828330_+	intronic
CAediting_1476699	chr22_31828331_+	intronic
CAediting_1476700	chr22_31828336_+	intronic
CAediting_1476701	chr22_31828357_+	intronic
CAediting_1476702	chr22_31828373_+	intronic
CAediting_1476703	chr22_31831644_+	intronic
CAediting_1476704	chr22_31834726_+	ncRNA_intronic
CAediting_1476705	chr22_31835016_+	ncRNA_intronic
CAediting_1476706	chr22_31843970_+	intronic
CAediting_1476707	chr22_31844106_+	intronic
CAediting_1476708	chr22_31844756_+	intronic
CAediting_1476709	chr22_31844765_+	intronic
CAediting_1476710	chr22_31844766_+	intronic
CAediting_1476711	chr22_31844789_+	intronic
CAediting_1476712	chr22_31844790_+	intronic
CAediting_1476713	chr22_31844793_+	intronic
CAediting_1476714	chr22_31844817_+	intronic
CAediting_1476715	chr22_31857830_+	ncRNA_intronic
CAediting_1476716	chr22_31869163_+	ncRNA_intronic
CAediting_1476717	chr22_31869177_+	ncRNA_intronic
CAediting_1476718	chr22_31869490_+	ncRNA_intronic
CAediting_1476719	chr22_31869497_+	ncRNA_intronic
CAediting_1476720	chr22_31872816_+	ncRNA_intronic
CAediting_1476721	chr22_31874064_+	ncRNA_exonic
CAediting_1476722	chr22_31876928_+	ncRNA_intronic
CAediting_1476723	chr22_31877032_+	ncRNA_intronic
CAediting_1476724	chr22_31877568_+	ncRNA_intronic
CAediting_1476725	chr22_31877630_+	ncRNA_intronic
CAediting_1476726	chr22_31877656_+	ncRNA_intronic
CAediting_1476727	chr22_31877691_+	ncRNA_intronic
CAediting_1476728	chr22_31878031_+	ncRNA_intronic
CAediting_1476729	chr22_31880770_+	intronic
CAediting_1476730	chr22_31881182_+	intronic
CAediting_1476731	chr22_31881690_+	intronic
CAediting_1476732	chr22_31881691_+	intronic
CAediting_1476733	chr22_31882876_+	intronic
CAediting_1476734	chr22_31886091_+	intronic
CAediting_1476735	chr22_31886096_+	intronic
CAediting_1476736	chr22_31886187_+	intronic
CAediting_1476737	chr22_31887273_+	intronic
CAediting_1476738	chr22_31892505_+	intronic
CAediting_1476739	chr22_31892534_+	intronic
CAediting_1476740	chr22_31892596_+	intronic
CAediting_1476741	chr22_31892633_+	intronic
CAediting_1476742	chr22_31893959_+	intronic
CAediting_1476743	chr22_31895200_+	intronic
CAediting_1476744	chr22_31895247_+	intronic
CAediting_1476745	chr22_31895252_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1476560	chr22_31761540_+	SINE	Alu	AluJr4
CAediting_1476561	chr22_31761542_+	SINE	Alu	AluJr4
CAediting_1476562	chr22_31761578_+	SINE	Alu	AluJr4
CAediting_1476563	chr22_31761589_+	SINE	Alu	AluJr4
CAediting_1476564	chr22_31761713_+	SINE	Alu	AluSx
CAediting_1476565	chr22_31761721_+	SINE	Alu	AluSx
CAediting_1476566	chr22_31761815_+	SINE	Alu	AluSx
CAediting_1476567	chr22_31761841_+	SINE	Alu	AluSx
CAediting_1476568	chr22_31761847_+	SINE	Alu	AluSx
CAediting_1476569	chr22_31761848_+	SINE	Alu	AluSx
CAediting_1476570	chr22_31761853_+	SINE	Alu	AluSx
CAediting_1476571	chr22_31761923_+	SINE	Alu	AluSx
CAediting_1476572	chr22_31762074_+	SINE	Alu	AluJr
CAediting_1476573	chr22_31769739_+	SINE	Alu	AluJb
CAediting_1476574	chr22_31770154_+	SINE	Alu	AluJb
CAediting_1476575	chr22_31771555_+	SINE	Alu	AluSc5
CAediting_1476576	chr22_31771984_+	SINE	Alu	AluJb
CAediting_1476577	chr22_31772899_+	SINE	Alu	AluSz6
CAediting_1476578	chr22_31772947_+	SINE	Alu	AluSz6
CAediting_1476579	chr22_31772962_+	SINE	Alu	AluSz6
CAediting_1476580	chr22_31778009_+	SINE	Alu	AluSx
CAediting_1476581	chr22_31778385_+	SINE	Alu	AluJo
CAediting_1476582	chr22_31778891_+	DNA	hAT-Charlie	MER20
CAediting_1476583	chr22_31779170_+	DNA	hAT-Charlie	MER20
CAediting_1476584	chr22_31781843_+	SINE	Alu	AluJo
CAediting_1476585	chr22_31784443_+	SINE	Alu	AluSx1
CAediting_1476586	chr22_31786011_+	SINE	Alu	AluSx1
CAediting_1476587	chr22_31786017_+	SINE	Alu	AluSx1
CAediting_1476588	chr22_31786110_+	SINE	Alu	AluSx1
CAediting_1476589	chr22_31786211_+	SINE	Alu	AluSx1
CAediting_1476590	chr22_31786621_+	SINE	Alu	AluJr4
CAediting_1476591	chr22_31786622_+	SINE	Alu	AluJr4
CAediting_1476592	chr22_31786677_+	SINE	Alu	AluJr4
CAediting_1476593	chr22_31786684_+	SINE	Alu	AluJr4
CAediting_1476594	chr22_31786685_+	SINE	Alu	AluJr4
CAediting_1476595	chr22_31786690_+	SINE	Alu	AluJr4
CAediting_1476596	chr22_31786692_+	SINE	Alu	AluJr4
CAediting_1476597	chr22_31786705_+	SINE	Alu	AluJr4
CAediting_1476598	chr22_31786744_+	SINE	Alu	AluJr4
CAediting_1476599	chr22_31786746_+	SINE	Alu	AluJr4
CAediting_1476600	chr22_31786760_+	SINE	Alu	AluJr4
CAediting_1476601	chr22_31786793_+	SINE	Alu	AluSx1
CAediting_1476602	chr22_31786918_+	SINE	Alu	AluSx1
CAediting_1476603	chr22_31786940_+	SINE	Alu	AluSx1
CAediting_1476604	chr22_31787042_+	SINE	Alu	AluSx1
CAediting_1476605	chr22_31787054_+	SINE	Alu	AluSx1
CAediting_1476606	chr22_31787076_+	SINE	Alu	AluSx1
CAediting_1476607	chr22_31787165_+	SINE	Alu	AluJb
CAediting_1476608	chr22_31787180_+	SINE	Alu	AluJb
CAediting_1476609	chr22_31787186_+	SINE	Alu	AluJb
CAediting_1476610	chr22_31787212_+	SINE	Alu	AluJb
CAediting_1476611	chr22_31787217_+	SINE	Alu	AluJb
CAediting_1476612	chr22_31787240_+	SINE	Alu	AluJb
CAediting_1476613	chr22_31787249_+	SINE	Alu	AluJb
CAediting_1476614	chr22_31787266_+	SINE	Alu	AluJb
CAediting_1476615	chr22_31787268_+	SINE	Alu	AluJb
CAediting_1476616	chr22_31787285_+	SINE	Alu	AluJb
CAediting_1476617	chr22_31787294_+	SINE	Alu	AluJb
CAediting_1476618	chr22_31787352_+	SINE	Alu	AluJb
CAediting_1476619	chr22_31787358_+	SINE	Alu	AluJb
CAediting_1476620	chr22_31787543_+	SINE	Alu	AluJr4
CAediting_1476621	chr22_31787551_+	SINE	Alu	AluJr4
CAediting_1476622	chr22_31787552_+	SINE	Alu	AluJr4
CAediting_1476623	chr22_31787557_+	SINE	Alu	AluJr4
CAediting_1476624	chr22_31787584_+	SINE	Alu	AluJr4
CAediting_1476625	chr22_31787593_+	SINE	Alu	AluJr4
CAediting_1476626	chr22_31787598_+	SINE	Alu	AluJr4
CAediting_1476627	chr22_31787599_+	SINE	Alu	AluJr4
CAediting_1476628	chr22_31787600_+	SINE	Alu	AluJr4
CAediting_1476629	chr22_31787609_+	SINE	Alu	AluJr4
CAediting_1476630	chr22_31787610_+	SINE	Alu	AluJr4
CAediting_1476631	chr22_31787614_+	SINE	Alu	AluJr4
CAediting_1476632	chr22_31787616_+	SINE	Alu	AluJr4
CAediting_1476633	chr22_31787618_+	SINE	Alu	AluJr4
CAediting_1476634	chr22_31787619_+	SINE	Alu	AluJr4
CAediting_1476635	chr22_31787621_+	SINE	Alu	AluJr4
CAediting_1476636	chr22_31787622_+	SINE	Alu	AluJr4
CAediting_1476637	chr22_31787623_+	SINE	Alu	AluJr4
CAediting_1476638	chr22_31787624_+	SINE	Alu	AluJr4
CAediting_1476639	chr22_31787627_+	SINE	Alu	AluJr4
CAediting_1476640	chr22_31787649_+	SINE	Alu	AluJr4
CAediting_1476641	chr22_31787654_+	SINE	Alu	AluJr4
CAediting_1476642	chr22_31787659_+	SINE	Alu	AluJr4
CAediting_1476643	chr22_31787661_+	SINE	Alu	AluJr4
CAediting_1476644	chr22_31787665_+	SINE	Alu	AluJr4
CAediting_1476645	chr22_31787682_+	SINE	Alu	AluJr4
CAediting_1476646	chr22_31787683_+	SINE	Alu	AluJr4
CAediting_1476647	chr22_31787691_+	SINE	Alu	AluJr4
CAediting_1476648	chr22_31787706_+	SINE	Alu	AluJr4
CAediting_1476649	chr22_31787708_+	SINE	Alu	AluJr4
CAediting_1476650	chr22_31787714_+	SINE	Alu	AluJr4
CAediting_1476651	chr22_31787718_+	SINE	Alu	AluJr4
CAediting_1476652	chr22_31787719_+	SINE	Alu	AluJr4
CAediting_1476653	chr22_31787721_+	SINE	Alu	AluJr4
CAediting_1476654	chr22_31787740_+	SINE	Alu	AluJr4
CAediting_1476655	chr22_31787741_+	SINE	Alu	AluJr4
CAediting_1476656	chr22_31787746_+	SINE	Alu	AluJr4
CAediting_1476657	chr22_31787751_+	SINE	Alu	AluJr4
CAediting_1476658	chr22_31787753_+	SINE	Alu	AluJr4
CAediting_1476659	chr22_31787756_+	SINE	Alu	AluJr4
CAediting_1476660	chr22_31787759_+	SINE	Alu	AluJr4
CAediting_1476661	chr22_31787764_+	SINE	Alu	AluJr4
CAediting_1476662	chr22_31787772_+	SINE	Alu	AluJr4
CAediting_1476663	chr22_31787777_+	SINE	Alu	AluJr4
CAediting_1476664	chr22_31787778_+	SINE	Alu	AluJr4
CAediting_1476665	chr22_31787794_+	SINE	Alu	AluJr4
CAediting_1476666	chr22_31787800_+	SINE	Alu	AluJr4
CAediting_1476667	chr22_31788353_+	SINE	Alu	AluJo
CAediting_1476668	chr22_31788408_+	SINE	Alu	AluJo
CAediting_1476669	chr22_31788483_+	SINE	Alu	AluJo
CAediting_1476670	chr22_31788983_+	SINE	Alu	AluSz6
CAediting_1476671	chr22_31789796_+	SINE	Alu	FLAM_A
CAediting_1476672	chr22_31789881_+	SINE	Alu	FLAM_A
CAediting_1476673	chr22_31790876_+	SINE	Alu	AluSx
CAediting_1476674	chr22_31790927_+	SINE	Alu	AluSx
CAediting_1476675	chr22_31791375_+	SINE	Alu	AluSz
CAediting_1476676	chr22_31791510_+	SINE	Alu	AluSz
CAediting_1476677	chr22_31791771_+	SINE	Alu	AluSc
CAediting_1476678	chr22_31791806_+	SINE	Alu	AluSc
CAediting_1476679	chr22_31792512_+	SINE	Alu	AluSx
CAediting_1476680	chr22_31794623_+	SINE	Alu	AluJb
CAediting_1476681	chr22_31794627_+	SINE	Alu	AluJb
CAediting_1476682	chr22_31812880_+	SINE	Alu	AluSp
CAediting_1476683	chr22_31812883_+	SINE	Alu	AluSp
CAediting_1476684	chr22_31815646_+	SINE	Alu	AluJr
CAediting_1476685	chr22_31815659_+	SINE	Alu	AluJr
CAediting_1476686	chr22_31815790_+	SINE	Alu	AluJr
CAediting_1476687	chr22_31817601_+	SINE	Alu	AluJb
CAediting_1476688	chr22_31823412_+	SINE	Alu	AluSz
CAediting_1476689	chr22_31823436_+	SINE	Alu	AluSz
CAediting_1476690	chr22_31823439_+	SINE	Alu	AluSz
CAediting_1476691	chr22_31823483_+	SINE	Alu	AluSz
CAediting_1476692	chr22_31824168_+	SINE	Alu	AluSx
CAediting_1476693	chr22_31824170_+	SINE	Alu	AluSx
CAediting_1476694	chr22_31824734_+	SINE	Alu	AluY
CAediting_1476695	chr22_31824784_+	SINE	Alu	AluY
CAediting_1476696	chr22_31824855_+	SINE	Alu	AluY
CAediting_1476697	chr22_31826229_+	SINE	Alu	AluSz6
CAediting_1476698	chr22_31828330_+	SINE	Alu	AluSp
CAediting_1476699	chr22_31828331_+	SINE	Alu	AluSp
CAediting_1476700	chr22_31828336_+	SINE	Alu	AluSp
CAediting_1476701	chr22_31828357_+	SINE	Alu	AluSp
CAediting_1476702	chr22_31828373_+	SINE	Alu	AluSp
CAediting_1476703	chr22_31831644_+	SINE	Alu	AluSx1
CAediting_1476704	chr22_31834726_+	SINE	Alu	AluSg
CAediting_1476705	chr22_31835016_+	SINE	Alu	AluJo
CAediting_1476706	chr22_31843970_+	SINE	Alu	AluSq2
CAediting_1476707	chr22_31844106_+	SINE	Alu	AluSq2
CAediting_1476708	chr22_31844756_+	SINE	Alu	AluJo
CAediting_1476709	chr22_31844765_+	SINE	Alu	AluJo
CAediting_1476710	chr22_31844766_+	SINE	Alu	AluJo
CAediting_1476711	chr22_31844789_+	SINE	Alu	AluJo
CAediting_1476712	chr22_31844790_+	SINE	Alu	AluJo
CAediting_1476713	chr22_31844793_+	SINE	Alu	AluJo
CAediting_1476714	chr22_31844817_+	SINE	Alu	AluJo
CAediting_1476715	chr22_31857830_+	SINE	Alu	AluJo
CAediting_1476716	chr22_31869163_+	SINE	Alu	AluJo
CAediting_1476717	chr22_31869177_+	SINE	Alu	AluJo
CAediting_1476718	chr22_31869490_+	SINE	Alu	AluSx
CAediting_1476719	chr22_31869497_+	SINE	Alu	AluSx
CAediting_1476720	chr22_31872816_+	SINE	Alu	AluSz
CAediting_1476721	chr22_31874064_+	SINE	Alu	AluSx1
CAediting_1476722	chr22_31876928_+	SINE	Alu	AluSz
CAediting_1476723	chr22_31877032_+	SINE	Alu	AluSz
CAediting_1476724	chr22_31877568_+	SINE	Alu	AluSg
CAediting_1476725	chr22_31877630_+	SINE	Alu	AluSg
CAediting_1476726	chr22_31877656_+	SINE	Alu	AluSg
CAediting_1476727	chr22_31877691_+	SINE	Alu	AluSg
CAediting_1476728	chr22_31878031_+	SINE	Alu	AluSc
CAediting_1476729	chr22_31880770_+	SINE	Alu	AluY
CAediting_1476730	chr22_31881182_+	SINE	Alu	AluSx1
CAediting_1476731	chr22_31881690_+	SINE	Alu	AluSx1
CAediting_1476732	chr22_31881691_+	SINE	Alu	AluSx1
CAediting_1476733	chr22_31882876_+	SINE	Alu	FLAM_C
CAediting_1476734	chr22_31886091_+	SINE	Alu	AluJo
CAediting_1476735	chr22_31886096_+	SINE	Alu	AluJo
CAediting_1476736	chr22_31886187_+	SINE	Alu	AluJo
CAediting_1476737	chr22_31887273_+	SINE	Alu	AluSq2
CAediting_1476738	chr22_31892505_+	SINE	Alu	AluSx
CAediting_1476739	chr22_31892534_+	SINE	Alu	AluSx
CAediting_1476740	chr22_31892596_+	SINE	Alu	AluSx
CAediting_1476741	chr22_31892633_+	SINE	Alu	AluSx
CAediting_1476742	chr22_31893959_+	DNA	hAT-Charlie	MER20
CAediting_1476743	chr22_31895200_+	DNA	hAT-Charlie	MER20
CAediting_1476744	chr22_31895247_+	DNA	hAT-Charlie	MER20
CAediting_1476745	chr22_31895252_+	DNA	hAT-Charlie	MER20

Top

RNA A-to-I editing events in the alternative splicing sites for DEPDC5

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000100150.15.DEPDC5.

Correlation between RNA A-to-I editing and PSI for ENSG00000100150.15.DEPDC5.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for DEPDC5

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for DEPDC5

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for DEPDC5

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000100150.15	ENST00000382111	hsa-miR-605-3p	31906538	31906545	8mer-1a	31906524	31906545	142	-17.51
CAediting_1306323	chr19_13836462_-	ENSG00000100150.15	ENST00000382111	hsa-miR-27a-3p	31906429	31906435	7mer-m8	31906412	31906436	149	-22.98

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for DEPDC5

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for DEPDC5

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_1476657	chr22_31787751_+	.	.	.	.	1.30331044751795e-05	0.546735252489713

Top

Relation with cancer stages for DEPDC5

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for DEPDC5

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for DEPDC5

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for DEPDC5

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
DEPDC5	C1858477	Epilepsy, Partial, with Variable Foci	8	CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET
DEPDC5	C4551983	EPILEPSY, FAMILIAL FOCAL, WITH VARIABLE FOCI 1	8	GENOMICS_ENGLAND;UNIPROT
DEPDC5	C1838062	Autosomal Dominant Lateral Temporal Lobe Epilepsy	2	ORPHANET
DEPDC5	C3696898	Autosomal Dominant Nocturnal Frontal Lobe Epilepsy	2	ORPHANET
DEPDC5	C2239176	Liver carcinoma	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene