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Editing gene: IQCB1 (CAeditome ID:9657)

Gene summary for IQCB1

Gene summary

Gene information	Gene symbol	IQCB1
	Gene ID	9657
	Gene name	IQ motif containing B1
	Synonyms	NPHP5\|PIQ\|SLSN5
	Cytomap	3q13.33\|3q21.1
	Type of gene	protein-coding
	Description	IQ calmodulin-binding motif-containing protein 1nephrocystin 5p53 and DNA damage-regulated IQ motif protein
	Modification date	20210518
	UniProtAcc	Q15051
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
IQCB1	GO:0005516	IQ calmodulin-binding motif-containing protein 1	15723066
IQCB1	GO:0005654	IQ calmodulin-binding motif-containing protein 1	0000052
IQCB1	GO:0005813	IQ calmodulin-binding motif-containing protein 1	21399614
IQCB1	GO:0015630	IQ calmodulin-binding motif-containing protein 1	0000052
IQCB1	GO:0032391	IQ calmodulin-binding motif-containing protein 1	15723066
IQCB1	GO:0045171	IQ calmodulin-binding motif-containing protein 1	0000052
IQCB1	GO:0072686	IQ calmodulin-binding motif-containing protein 1	0000052

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RNA A-to-I events for IQCB1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000173226.15

RNA A-to-I editing events in Cancer.

CAediting_302809(121770775, -), CAediting_302810(121770785, -), CAediting_302811(121778005, -), CAediting_302812(121778010, -), CAediting_302813(121778661, -), CAediting_302814(121782755, -), CAediting_302815(121782791, -), CAediting_302816(121782804, -), CAediting_302817(121782812, -), CAediting_302818(121784297, -), CAediting_302819(121784748, -), CAediting_302820(121784796, -), CAediting_302821(121784924, -), CAediting_302822(121785451, -), CAediting_302823(121785924, -), CAediting_302824(121785951, -), CAediting_302825(121786088, -), CAediting_302826(121786415, -), CAediting_302827(121787629, -), CAediting_302828(121787675, -), CAediting_302829(121820987, -), CAediting_302830(121829832, -), CAediting_302831(121829941, -), CAediting_302832(121829962, -), CAediting_302833(121829977, -), CAediting_302834(121829981, -), CAediting_302835(121829985, -), CAediting_302836(121830002, -), CAediting_302837(121830015, -), CAediting_302838(121830024, -), CAediting_302839(121830027, -), CAediting_302840(121830037, -), CAediting_302841(121830038, -), CAediting_302842(121830041, -), CAediting_302843(121830044, -), CAediting_302844(121830050, -), CAediting_302845(121830070, -), CAediting_302846(121830080, -), CAediting_302847(121830084, -), CAediting_302848(121830086, -), CAediting_302849(121830089, -), CAediting_302850(121830095, -), CAediting_302851(121830096, -), CAediting_302852(121830108, -), CAediting_302853(121830122, -), CAediting_302854(121830129, -), CAediting_302855(121830147, -), CAediting_302856(121830162, -), CAediting_302857(121830178, -), CAediting_302858(121830191, -), CAediting_302859(121830198, -), CAediting_302860(121830400, -), CAediting_302861(121831261, -), CAediting_302862(121831269, -), CAediting_302863(121831275, -), CAediting_302864(121831278, -), CAediting_302865(121831288, -), CAediting_302866(121831305, -), CAediting_302867(121831311, -), CAediting_302868(121831316, -), CAediting_302869(121831317, -), CAediting_302870(121831340, -), CAediting_302871(121831341, -), CAediting_302872(121831342, -), CAediting_302873(121831343, -), CAediting_302874(121831344, -), CAediting_302875(121831347, -), CAediting_302876(121831350, -), CAediting_302877(121831351, -), CAediting_302878(121831352, -), CAediting_302879(121831356, -), CAediting_302880(121831367, -), CAediting_302881(121831368, -), CAediting_302882(121832371, -), CAediting_302883(121832385, -), CAediting_302884(121832393, -), CAediting_302885(121832395, -), CAediting_302886(121832400, -), CAediting_302887(121832424, -), CAediting_302888(121832442, -), CAediting_302889(121832464, -), CAediting_302890(121832465, -), CAediting_302891(121832475, -), CAediting_302892(121832500, -), CAediting_302893(121832504, -), CAediting_302894(121832505, -), CAediting_302895(121832506, -), CAediting_302896(121832509, -), CAediting_302897(121832520, -), CAediting_302898(121832530, -), CAediting_302899(121832531, -), CAediting_302900(121832540, -), CAediting_302901(121832543, -), CAediting_302902(121832545, -), CAediting_302903(121832546, -), CAediting_302904(121832554, -), CAediting_302905(121832559, -), CAediting_302906(121832564, -), CAediting_302907(121832569, -), CAediting_302908(121832599, -), CAediting_302909(121832600, -), CAediting_302910(121833130, -), CAediting_302911(121833131, -), CAediting_302912(121833134, -), CAediting_302913(121833138, -), CAediting_302914(121833148, -), CAediting_302915(121833156, -), CAediting_302916(121833160, -), CAediting_302917(121833170, -), CAediting_302918(121833179, -), CAediting_302919(121833188, -), CAediting_302920(121833189, -), CAediting_302921(121833191, -), CAediting_302922(121833192, -), CAediting_302923(121833194, -), CAediting_302924(121833195, -), CAediting_302925(121833205, -), CAediting_302926(121833206, -), CAediting_302927(121833208, -), CAediting_302928(121833216, -), CAediting_302929(121833219, -), CAediting_302930(121833223, -), CAediting_302931(121833224, -), CAediting_302932(121833225, -), CAediting_302933(121833226, -), CAediting_302934(121833237, -), CAediting_302935(121833241, -), CAediting_302936(121833245, -), CAediting_302937(121833249, -), CAediting_302938(121833830, -), CAediting_302939(121833835, -), CAediting_302940(121833836, -), CAediting_302941(121833841, -), CAediting_302942(121833843, -), CAediting_302943(121833846, -), CAediting_302944(121833854, -), CAediting_302945(121833866, -), CAediting_302946(121833867, -), CAediting_302947(121833871, -), CAediting_302948(121833877, -), CAediting_302949(121833887, -), CAediting_302950(121833889, -), CAediting_302951(121833890, -), CAediting_302952(121833898, -), CAediting_302953(121833906, -), CAediting_302954(121833907, -), CAediting_302955(121833909, -), CAediting_302956(121833912, -), CAediting_302957(121833915, -), CAediting_302958(121833916, -), CAediting_302959(121833919, -), CAediting_302960(121833921, -), CAediting_302961(121833924, -), CAediting_302962(121833926, -), CAediting_302963(121833928, -), CAediting_302964(121833929, -), CAediting_302965(121833933, -), CAediting_302966(121833937, -), CAediting_302967(121833956, -),

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RNA editing positional annotations for IQCB1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_302809	chr3_121770775_-	intronic
CAediting_302810	chr3_121770785_-	intronic
CAediting_302811	chr3_121778005_-	intronic
CAediting_302812	chr3_121778010_-	intronic
CAediting_302813	chr3_121778661_-	intronic
CAediting_302814	chr3_121782755_-	intronic
CAediting_302815	chr3_121782791_-	intronic
CAediting_302816	chr3_121782804_-	intronic
CAediting_302817	chr3_121782812_-	intronic
CAediting_302818	chr3_121784297_-	intronic
CAediting_302819	chr3_121784748_-	intronic
CAediting_302820	chr3_121784796_-	intronic
CAediting_302821	chr3_121784924_-	intronic
CAediting_302822	chr3_121785451_-	intronic
CAediting_302823	chr3_121785924_-	intronic
CAediting_302824	chr3_121785951_-	intronic
CAediting_302825	chr3_121786088_-	intronic
CAediting_302826	chr3_121786415_-	intronic
CAediting_302827	chr3_121787629_-	intronic
CAediting_302828	chr3_121787675_-	intronic
CAediting_302829	chr3_121820987_-	intronic
CAediting_302830	chr3_121829832_-	intronic
CAediting_302831	chr3_121829941_-	intronic
CAediting_302832	chr3_121829962_-	intronic
CAediting_302833	chr3_121829977_-	intronic
CAediting_302834	chr3_121829981_-	intronic
CAediting_302835	chr3_121829985_-	intronic
CAediting_302836	chr3_121830002_-	intronic
CAediting_302837	chr3_121830015_-	intronic
CAediting_302838	chr3_121830024_-	intronic
CAediting_302839	chr3_121830027_-	intronic
CAediting_302840	chr3_121830037_-	intronic
CAediting_302841	chr3_121830038_-	intronic
CAediting_302842	chr3_121830041_-	intronic
CAediting_302843	chr3_121830044_-	intronic
CAediting_302844	chr3_121830050_-	intronic
CAediting_302845	chr3_121830070_-	intronic
CAediting_302846	chr3_121830080_-	intronic
CAediting_302847	chr3_121830084_-	intronic
CAediting_302848	chr3_121830086_-	intronic
CAediting_302849	chr3_121830089_-	intronic
CAediting_302850	chr3_121830095_-	intronic
CAediting_302851	chr3_121830096_-	intronic
CAediting_302852	chr3_121830108_-	intronic
CAediting_302853	chr3_121830122_-	intronic
CAediting_302854	chr3_121830129_-	intronic
CAediting_302855	chr3_121830147_-	intronic
CAediting_302856	chr3_121830162_-	intronic
CAediting_302857	chr3_121830178_-	intronic
CAediting_302858	chr3_121830191_-	intronic
CAediting_302859	chr3_121830198_-	intronic
CAediting_302860	chr3_121830400_-	intronic
CAediting_302861	chr3_121831261_-	intronic
CAediting_302862	chr3_121831269_-	intronic
CAediting_302863	chr3_121831275_-	intronic
CAediting_302864	chr3_121831278_-	intronic
CAediting_302865	chr3_121831288_-	intronic
CAediting_302866	chr3_121831305_-	intronic
CAediting_302867	chr3_121831311_-	intronic
CAediting_302868	chr3_121831316_-	intronic
CAediting_302869	chr3_121831317_-	intronic
CAediting_302870	chr3_121831340_-	intronic
CAediting_302871	chr3_121831341_-	intronic
CAediting_302872	chr3_121831342_-	intronic
CAediting_302873	chr3_121831343_-	intronic
CAediting_302874	chr3_121831344_-	intronic
CAediting_302875	chr3_121831347_-	intronic
CAediting_302876	chr3_121831350_-	intronic
CAediting_302877	chr3_121831351_-	intronic
CAediting_302878	chr3_121831352_-	intronic
CAediting_302879	chr3_121831356_-	intronic
CAediting_302880	chr3_121831367_-	intronic
CAediting_302881	chr3_121831368_-	intronic
CAediting_302882	chr3_121832371_-	intronic
CAediting_302883	chr3_121832385_-	intronic
CAediting_302884	chr3_121832393_-	intronic
CAediting_302885	chr3_121832395_-	intronic
CAediting_302886	chr3_121832400_-	intronic
CAediting_302887	chr3_121832424_-	intronic
CAediting_302888	chr3_121832442_-	intronic
CAediting_302889	chr3_121832464_-	intronic
CAediting_302890	chr3_121832465_-	intronic
CAediting_302891	chr3_121832475_-	intronic
CAediting_302892	chr3_121832500_-	intronic
CAediting_302893	chr3_121832504_-	intronic
CAediting_302894	chr3_121832505_-	intronic
CAediting_302895	chr3_121832506_-	intronic
CAediting_302896	chr3_121832509_-	intronic
CAediting_302897	chr3_121832520_-	intronic
CAediting_302898	chr3_121832530_-	intronic
CAediting_302899	chr3_121832531_-	intronic
CAediting_302900	chr3_121832540_-	intronic
CAediting_302901	chr3_121832543_-	intronic
CAediting_302902	chr3_121832545_-	intronic
CAediting_302903	chr3_121832546_-	intronic
CAediting_302904	chr3_121832554_-	intronic
CAediting_302905	chr3_121832559_-	intronic
CAediting_302906	chr3_121832564_-	intronic
CAediting_302907	chr3_121832569_-	intronic
CAediting_302908	chr3_121832599_-	intronic
CAediting_302909	chr3_121832600_-	intronic
CAediting_302910	chr3_121833130_-	intronic
CAediting_302911	chr3_121833131_-	intronic
CAediting_302912	chr3_121833134_-	intronic
CAediting_302913	chr3_121833138_-	intronic
CAediting_302914	chr3_121833148_-	intronic
CAediting_302915	chr3_121833156_-	intronic
CAediting_302916	chr3_121833160_-	intronic
CAediting_302917	chr3_121833170_-	intronic
CAediting_302918	chr3_121833179_-	intronic
CAediting_302919	chr3_121833188_-	intronic
CAediting_302920	chr3_121833189_-	intronic
CAediting_302921	chr3_121833191_-	intronic
CAediting_302922	chr3_121833192_-	intronic
CAediting_302923	chr3_121833194_-	intronic
CAediting_302924	chr3_121833195_-	intronic
CAediting_302925	chr3_121833205_-	intronic
CAediting_302926	chr3_121833206_-	intronic
CAediting_302927	chr3_121833208_-	intronic
CAediting_302928	chr3_121833216_-	intronic
CAediting_302929	chr3_121833219_-	intronic
CAediting_302930	chr3_121833223_-	intronic
CAediting_302931	chr3_121833224_-	intronic
CAediting_302932	chr3_121833225_-	intronic
CAediting_302933	chr3_121833226_-	intronic
CAediting_302934	chr3_121833237_-	intronic
CAediting_302935	chr3_121833241_-	intronic
CAediting_302936	chr3_121833245_-	intronic
CAediting_302937	chr3_121833249_-	intronic
CAediting_302938	chr3_121833830_-	intronic
CAediting_302939	chr3_121833835_-	intronic
CAediting_302940	chr3_121833836_-	intronic
CAediting_302941	chr3_121833841_-	intronic
CAediting_302942	chr3_121833843_-	intronic
CAediting_302943	chr3_121833846_-	intronic
CAediting_302944	chr3_121833854_-	intronic
CAediting_302945	chr3_121833866_-	intronic
CAediting_302946	chr3_121833867_-	intronic
CAediting_302947	chr3_121833871_-	intronic
CAediting_302948	chr3_121833877_-	intronic
CAediting_302949	chr3_121833887_-	intronic
CAediting_302950	chr3_121833889_-	intronic
CAediting_302951	chr3_121833890_-	intronic
CAediting_302952	chr3_121833898_-	intronic
CAediting_302953	chr3_121833906_-	intronic
CAediting_302954	chr3_121833907_-	intronic
CAediting_302955	chr3_121833909_-	intronic
CAediting_302956	chr3_121833912_-	intronic
CAediting_302957	chr3_121833915_-	intronic
CAediting_302958	chr3_121833916_-	intronic
CAediting_302959	chr3_121833919_-	intronic
CAediting_302960	chr3_121833921_-	intronic
CAediting_302961	chr3_121833924_-	intronic
CAediting_302962	chr3_121833926_-	intronic
CAediting_302963	chr3_121833928_-	intronic
CAediting_302964	chr3_121833929_-	intronic
CAediting_302965	chr3_121833933_-	intronic
CAediting_302966	chr3_121833937_-	ncRNA_exonic
CAediting_302967	chr3_121833956_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_302809	chr3_121770775_-	SINE	Alu	AluJb
CAediting_302810	chr3_121770785_-	SINE	Alu	AluJb
CAediting_302811	chr3_121778005_-	SINE	Alu	AluJb
CAediting_302812	chr3_121778010_-	SINE	Alu	AluJb
CAediting_302813	chr3_121778661_-	SINE	Alu	AluSq2
CAediting_302814	chr3_121782755_-	SINE	Alu	AluSc
CAediting_302815	chr3_121782791_-	SINE	Alu	AluSc
CAediting_302816	chr3_121782804_-	SINE	Alu	AluSc
CAediting_302817	chr3_121782812_-	SINE	Alu	AluSc
CAediting_302818	chr3_121784297_-	scRNA	scRNA	BC200
CAediting_302819	chr3_121784748_-	SINE	Alu	AluJb
CAediting_302820	chr3_121784796_-	SINE	Alu	AluJb
CAediting_302821	chr3_121784924_-	SINE	Alu	AluJb
CAediting_302822	chr3_121785451_-	SINE	Alu	AluJb
CAediting_302823	chr3_121785924_-	SINE	Alu	AluJo
CAediting_302824	chr3_121785951_-	SINE	Alu	AluJo
CAediting_302825	chr3_121786088_-	SINE	Alu	AluJo
CAediting_302826	chr3_121786415_-	SINE	Alu	AluJo
CAediting_302827	chr3_121787629_-	SINE	Alu	AluSc
CAediting_302828	chr3_121787675_-	SINE	Alu	AluSc
CAediting_302829	chr3_121820987_-	SINE	Alu	AluJo
CAediting_302830	chr3_121829832_-	LTR	ERVL	MER68
CAediting_302831	chr3_121829941_-	SINE	Alu	AluSz
CAediting_302832	chr3_121829962_-	SINE	Alu	AluSz
CAediting_302833	chr3_121829977_-	SINE	Alu	AluSz
CAediting_302834	chr3_121829981_-	SINE	Alu	AluSz
CAediting_302835	chr3_121829985_-	SINE	Alu	AluSz
CAediting_302836	chr3_121830002_-	SINE	Alu	AluSz
CAediting_302837	chr3_121830015_-	SINE	Alu	AluSz
CAediting_302838	chr3_121830024_-	SINE	Alu	AluSz
CAediting_302839	chr3_121830027_-	SINE	Alu	AluSz
CAediting_302840	chr3_121830037_-	SINE	Alu	AluSz
CAediting_302841	chr3_121830038_-	SINE	Alu	AluSz
CAediting_302842	chr3_121830041_-	SINE	Alu	AluSz
CAediting_302843	chr3_121830044_-	SINE	Alu	AluSz
CAediting_302844	chr3_121830050_-	SINE	Alu	AluSz
CAediting_302845	chr3_121830070_-	SINE	Alu	AluSz
CAediting_302846	chr3_121830080_-	SINE	Alu	AluSz
CAediting_302847	chr3_121830084_-	SINE	Alu	AluSz
CAediting_302848	chr3_121830086_-	SINE	Alu	AluSz
CAediting_302849	chr3_121830089_-	SINE	Alu	AluSz
CAediting_302850	chr3_121830095_-	SINE	Alu	AluSz
CAediting_302851	chr3_121830096_-	SINE	Alu	AluSz
CAediting_302852	chr3_121830108_-	SINE	Alu	AluSz
CAediting_302853	chr3_121830122_-	SINE	Alu	AluSz
CAediting_302854	chr3_121830129_-	SINE	Alu	AluSz
CAediting_302855	chr3_121830147_-	SINE	Alu	AluSz
CAediting_302856	chr3_121830162_-	SINE	Alu	AluSz
CAediting_302857	chr3_121830178_-	SINE	Alu	AluSz
CAediting_302858	chr3_121830191_-	SINE	Alu	AluSz
CAediting_302859	chr3_121830198_-	SINE	Alu	AluSz
CAediting_302860	chr3_121830400_-	SINE	Alu	FLAM_A
CAediting_302861	chr3_121831261_-	SINE	Alu	AluJb
CAediting_302862	chr3_121831269_-	SINE	Alu	AluJb
CAediting_302863	chr3_121831275_-	SINE	Alu	AluJb
CAediting_302864	chr3_121831278_-	SINE	Alu	AluJb
CAediting_302865	chr3_121831288_-	SINE	Alu	AluJb
CAediting_302866	chr3_121831305_-	SINE	Alu	AluJb
CAediting_302867	chr3_121831311_-	SINE	Alu	AluJb
CAediting_302868	chr3_121831316_-	SINE	Alu	AluJb
CAediting_302869	chr3_121831317_-	SINE	Alu	AluJb
CAediting_302870	chr3_121831340_-	LTR	ERVL	MER21A
CAediting_302871	chr3_121831341_-	LTR	ERVL	MER21A
CAediting_302872	chr3_121831342_-	LTR	ERVL	MER21A
CAediting_302873	chr3_121831343_-	LTR	ERVL	MER21A
CAediting_302874	chr3_121831344_-	LTR	ERVL	MER21A
CAediting_302875	chr3_121831347_-	LTR	ERVL	MER21A
CAediting_302876	chr3_121831350_-	LTR	ERVL	MER21A
CAediting_302877	chr3_121831351_-	LTR	ERVL	MER21A
CAediting_302878	chr3_121831352_-	LTR	ERVL	MER21A
CAediting_302879	chr3_121831356_-	LTR	ERVL	MER21A
CAediting_302880	chr3_121831367_-	LTR	ERVL	MER21A
CAediting_302881	chr3_121831368_-	LTR	ERVL	MER21A
CAediting_302882	chr3_121832371_-	SINE	Alu	AluSz
CAediting_302883	chr3_121832385_-	SINE	Alu	AluSz
CAediting_302884	chr3_121832393_-	SINE	Alu	AluSz
CAediting_302885	chr3_121832395_-	SINE	Alu	AluSz
CAediting_302886	chr3_121832400_-	SINE	Alu	AluSz
CAediting_302887	chr3_121832424_-	SINE	Alu	AluSz
CAediting_302888	chr3_121832442_-	SINE	Alu	AluSz
CAediting_302889	chr3_121832464_-	SINE	Alu	AluSz
CAediting_302890	chr3_121832465_-	SINE	Alu	AluSz
CAediting_302891	chr3_121832475_-	SINE	Alu	AluSz
CAediting_302892	chr3_121832500_-	SINE	Alu	AluSz
CAediting_302893	chr3_121832504_-	SINE	Alu	AluSz
CAediting_302894	chr3_121832505_-	SINE	Alu	AluSz
CAediting_302895	chr3_121832506_-	SINE	Alu	AluSz
CAediting_302896	chr3_121832509_-	SINE	Alu	AluSz
CAediting_302897	chr3_121832520_-	SINE	Alu	AluSz
CAediting_302898	chr3_121832530_-	SINE	Alu	AluSz
CAediting_302899	chr3_121832531_-	SINE	Alu	AluSz
CAediting_302900	chr3_121832540_-	SINE	Alu	AluSz
CAediting_302901	chr3_121832543_-	SINE	Alu	AluSz
CAediting_302902	chr3_121832545_-	SINE	Alu	AluSz
CAediting_302903	chr3_121832546_-	SINE	Alu	AluSz
CAediting_302904	chr3_121832554_-	SINE	Alu	AluSz
CAediting_302905	chr3_121832559_-	SINE	Alu	AluSz
CAediting_302906	chr3_121832564_-	SINE	Alu	AluSz
CAediting_302907	chr3_121832569_-	SINE	Alu	AluSz
CAediting_302908	chr3_121832599_-	SINE	Alu	AluSz
CAediting_302909	chr3_121832600_-	SINE	Alu	AluSz
CAediting_302910	chr3_121833130_-	SINE	MIR	MIR
CAediting_302911	chr3_121833131_-	SINE	MIR	MIR
CAediting_302912	chr3_121833134_-	SINE	MIR	MIR
CAediting_302913	chr3_121833138_-	SINE	MIR	MIR
CAediting_302914	chr3_121833148_-	SINE	MIR	MIR
CAediting_302915	chr3_121833156_-	SINE	MIR	MIR
CAediting_302916	chr3_121833160_-	SINE	MIR	MIR
CAediting_302917	chr3_121833170_-	SINE	MIR	MIR
CAediting_302918	chr3_121833179_-	SINE	MIR	MIR
CAediting_302919	chr3_121833188_-	SINE	MIR	MIR
CAediting_302920	chr3_121833189_-	SINE	MIR	MIR
CAediting_302921	chr3_121833191_-	SINE	MIR	MIR
CAediting_302922	chr3_121833192_-	SINE	MIR	MIR
CAediting_302923	chr3_121833194_-	SINE	MIR	MIR
CAediting_302924	chr3_121833195_-	SINE	MIR	MIR
CAediting_302947	chr3_121833871_-	SINE	MIR	MIR
CAediting_302948	chr3_121833877_-	SINE	MIR	MIR
CAediting_302949	chr3_121833887_-	SINE	MIR	MIR
CAediting_302950	chr3_121833889_-	SINE	MIR	MIR
CAediting_302951	chr3_121833890_-	SINE	MIR	MIR
CAediting_302952	chr3_121833898_-	SINE	MIR	MIR
CAediting_302953	chr3_121833906_-	SINE	MIR	MIR
CAediting_302954	chr3_121833907_-	SINE	MIR	MIR
CAediting_302955	chr3_121833909_-	SINE	MIR	MIR
CAediting_302956	chr3_121833912_-	SINE	MIR	MIR
CAediting_302957	chr3_121833915_-	SINE	MIR	MIR
CAediting_302958	chr3_121833916_-	SINE	MIR	MIR
CAediting_302959	chr3_121833919_-	SINE	MIR	MIR
CAediting_302960	chr3_121833921_-	SINE	MIR	MIR
CAediting_302961	chr3_121833924_-	SINE	MIR	MIR
CAediting_302962	chr3_121833926_-	SINE	MIR	MIR
CAediting_302963	chr3_121833928_-	SINE	MIR	MIR
CAediting_302964	chr3_121833929_-	SINE	MIR	MIR
CAediting_302965	chr3_121833933_-	SINE	MIR	MIR
CAediting_302966	chr3_121833937_-	SINE	MIR	MIR
CAediting_302967	chr3_121833956_-	SINE	MIR	MIR

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RNA A-to-I editing events in the alternative splicing sites for IQCB1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000173226.15.IQCB1.

Correlation between RNA A-to-I editing and PSI for ENSG00000173226.15.IQCB1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for IQCB1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for IQCB1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for IQCB1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000173226.15	ENST00000349820	hsa-miR-548aa	121770055	121770061	7mer-m8	121770054	121770081	143	-14.02
CAediting_1229415	chr17_67471547_+	ENSG00000173226.15	ENST00000349820	hsa-miR-548aa	121770120	121770126	7mer-m8	121770119	121770143	156	-17.31
CAediting_1160181	chr17_7017644_-	ENSG00000173226.15	ENST00000393650	hsa-miR-195-3p	121788369	121788375	7mer-m8	121788368	121788387	144	-16.1
CAediting_1229413	chr17_67471544_+	ENSG00000173226.15	ENST00000393650	hsa-miR-548aa	121770055	121770061	7mer-m8	121770054	121770081	143	-14.02
CAediting_1229415	chr17_67471547_+	ENSG00000173226.15	ENST00000393650	hsa-miR-548aa	121770120	121770126	7mer-m8	121770119	121770143	156	-17.31

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for IQCB1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000471726.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_302966	ENST00000471726.1	chr3_121833937_-	-158.10	-158.10	-157.70
CAediting_302967	ENST00000471726.1	chr3_121833956_-	-157.70	-158.10	-157.70

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Relation with ADAR for IQCB1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_302950	chr3_121833889_-	0.0114045049224522	0.327262044191706	.	.	.	.
LAML	CAediting_302956	chr3_121833912_-	0.00976325604536577	0.300604756544816	.	.	.	.
ESCA	CAediting_302963	chr3_121833928_-	.	.	0.0106213897837969	0.341906775532017	.	.
ESCA	CAediting_302965	chr3_121833933_-	.	.	0.0210897837956287	0.299737517873328	.	.

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Relation with cancer stages for IQCB1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_302933	chr3_121833226_-	0.0284687577324721	-0.406924870448507
ESCA	clinical_stage	CAediting_302951	chr3_121833890_-	0.00165756533366397	0.618454880930854

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Relation with survival for IQCB1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for IQCB1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for IQCB1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
IQCB1	C0339527	Leber Congenital Amaurosis	2	GENOMICS_ENGLAND;ORPHANET
IQCB1	C0403553	Renal dysplasia and retinal aplasia (disorder)	1	GENOMICS_ENGLAND;ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene