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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RALGPS1 (CAeditome ID:9649)

Gene summary for RALGPS1

check button Gene summary
Gene informationGene symbol

RALGPS1

Gene ID

9649

Gene nameRal GEF with PH domain and SH3 binding motif 1
SynonymsRALGEF2|RALGPS1A
Cytomap

9q33.3

Type of geneprotein-coding
Descriptionras-specific guanine nucleotide-releasing factor RalGPS1Ral guanine nucleotide exchange factor RalGPS1Aral guanine nucleotide exchange factor 2ralA exchange factor RalGPS1
Modification date20210518
UniProtAcc

Q5JS13

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
RALGPS1

GO:0005085

Ras-specific guanine nucleotide-releasing factor RalGPS1

10747847

RALGPS1

GO:0032485

Ras-specific guanine nucleotide-releasing factor RalGPS1

10747847


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RNA A-to-I events for RALGPS1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000136828.17

check button RNA A-to-I editing events in Cancer.
CAediting_710034(126946369, +), CAediting_710035(126966246, +), CAediting_710036(126966337, +), CAediting_710037(126966357, +), CAediting_710038(126966372, +), CAediting_710039(126966376, +), CAediting_710040(126966380, +), CAediting_710041(126966392, +), CAediting_710042(126966394, +), CAediting_710043(126966402, +), CAediting_710044(126966416, +), CAediting_710045(126966428, +), CAediting_710046(126966450, +), CAediting_710047(126966456, +), CAediting_710048(126966476, +), CAediting_710049(126968223, +), CAediting_710050(127000605, +), CAediting_710051(127001019, +), CAediting_710052(127001020, +), CAediting_710053(127001028, +), CAediting_710054(127001180, +), CAediting_710055(127001202, +), CAediting_710056(127001275, +), CAediting_710057(127032774, +), CAediting_710058(127040840, +), CAediting_710059(127040985, +), CAediting_710060(127041432, +), CAediting_710061(127044030, +), CAediting_710062(127044106, +), CAediting_710063(127046654, +), CAediting_710064(127047611, +), CAediting_710065(127072236, +), CAediting_710066(127173945, +), CAediting_710067(127181826, +), CAediting_710068(127181850, +), CAediting_710069(127181908, +), CAediting_710070(127181973, +), CAediting_710071(127182082, +), CAediting_710072(127182083, +), CAediting_710073(127182232, +), CAediting_710074(127182299, +), CAediting_710075(127182703, +), CAediting_710076(127182749, +), CAediting_710077(127182766, +), CAediting_710078(127182774, +), CAediting_710079(127182776, +), CAediting_710080(127182779, +), CAediting_710081(127182780, +), CAediting_710082(127182851, +), CAediting_710083(127182856, +), CAediting_710084(127182857, +), CAediting_710085(127182900, +), CAediting_710086(127182911, +), CAediting_710087(127183760, +), CAediting_710088(127183812, +), CAediting_710089(127183889, +), CAediting_710090(127183894, +), CAediting_710091(127183895, +), CAediting_710092(127183900, +), CAediting_710093(127183901, +), CAediting_710094(127183904, +), CAediting_710095(127183907, +), CAediting_710096(127183913, +), CAediting_710097(127183914, +), CAediting_710098(127183916, +), CAediting_710099(127183920, +), CAediting_710100(127183922, +), CAediting_710101(127183936, +), CAediting_710102(127184088, +), CAediting_710103(127184093, +), CAediting_710104(127184094, +), CAediting_710105(127184202, +), CAediting_710106(127184230, +), CAediting_710107(127188162, +), CAediting_710108(127188179, +), CAediting_710109(127188266, +), CAediting_710110(127188286, +), CAediting_710111(127188751, +), CAediting_710112(127188756, +), CAediting_710113(127188765, +), CAediting_710114(127188836, +), CAediting_710115(127188847, +), CAediting_710116(127188857, +), CAediting_710117(127188871, +), CAediting_710118(127188877, +), CAediting_710119(127188879, +), CAediting_710120(127188880, +), CAediting_710121(127188896, +), CAediting_710122(127188901, +), CAediting_710123(127188902, +), CAediting_710124(127188906, +), CAediting_710125(127188911, +), CAediting_710126(127188912, +), CAediting_710127(127188915, +), CAediting_710128(127188920, +), CAediting_710129(127188921, +), CAediting_710130(127188925, +), CAediting_710131(127188928, +), CAediting_710132(127188941, +), CAediting_710133(127188945, +), CAediting_710134(127188949, +), CAediting_710135(127188950, +), CAediting_710136(127188952, +), CAediting_710137(127188957, +), CAediting_710138(127188960, +), CAediting_710139(127188982, +), CAediting_710140(127188987, +), CAediting_710141(127190351, +), CAediting_710142(127190393, +), CAediting_710143(127190403, +), CAediting_710144(127190427, +), CAediting_710145(127190441, +), CAediting_710146(127190450, +), CAediting_710147(127190508, +), CAediting_710148(127192543, +), CAediting_710149(127196257, +), CAediting_710150(127196290, +), CAediting_710151(127196313, +), CAediting_710152(127203815, +), CAediting_710153(127203842, +), CAediting_710154(127203879, +), CAediting_710155(127203880, +), CAediting_710156(127204860, +), CAediting_710157(127205231, +), CAediting_710158(127205235, +),

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RNA editing positional annotations for RALGPS1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_710102chr9_127184088_+nonsynonymous SNVENST00000394022.6c.A1132Gp.S378GDBN
CAediting_710104chr9_127184094_+nonsynonymous SNVENST00000394022.6c.A1138Gp.S380GDBN

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_710034chr9_126946369_+ncRNA_intronic
CAediting_710035chr9_126966246_+ncRNA_intronic
CAediting_710036chr9_126966337_+ncRNA_intronic
CAediting_710037chr9_126966357_+ncRNA_intronic
CAediting_710038chr9_126966372_+ncRNA_intronic
CAediting_710039chr9_126966376_+ncRNA_intronic
CAediting_710040chr9_126966380_+ncRNA_intronic
CAediting_710041chr9_126966392_+ncRNA_intronic
CAediting_710042chr9_126966394_+ncRNA_intronic
CAediting_710043chr9_126966402_+ncRNA_intronic
CAediting_710044chr9_126966416_+ncRNA_intronic
CAediting_710045chr9_126966428_+ncRNA_intronic
CAediting_710046chr9_126966450_+ncRNA_intronic
CAediting_710047chr9_126966456_+ncRNA_intronic
CAediting_710048chr9_126966476_+ncRNA_intronic
CAediting_710049chr9_126968223_+ncRNA_intronic
CAediting_710050chr9_127000605_+ncRNA_intronic
CAediting_710051chr9_127001019_+ncRNA_intronic
CAediting_710052chr9_127001020_+ncRNA_intronic
CAediting_710053chr9_127001028_+ncRNA_intronic
CAediting_710054chr9_127001180_+ncRNA_intronic
CAediting_710055chr9_127001202_+ncRNA_intronic
CAediting_710056chr9_127001275_+ncRNA_intronic
CAediting_710057chr9_127032774_+ncRNA_intronic
CAediting_710058chr9_127040840_+ncRNA_intronic
CAediting_710059chr9_127040985_+ncRNA_intronic
CAediting_710060chr9_127041432_+ncRNA_intronic
CAediting_710061chr9_127044030_+ncRNA_intronic
CAediting_710062chr9_127044106_+ncRNA_intronic
CAediting_710063chr9_127046654_+ncRNA_intronic
CAediting_710064chr9_127047611_+ncRNA_intronic
CAediting_710065chr9_127072236_+ncRNA_intronic
CAediting_710066chr9_127173945_+intronic
CAediting_710067chr9_127181826_+intronic
CAediting_710068chr9_127181850_+intronic
CAediting_710069chr9_127181908_+intronic
CAediting_710070chr9_127181973_+intronic
CAediting_710071chr9_127182082_+intronic
CAediting_710072chr9_127182083_+intronic
CAediting_710073chr9_127182232_+intronic
CAediting_710074chr9_127182299_+intronic
CAediting_710075chr9_127182703_+intronic
CAediting_710076chr9_127182749_+intronic
CAediting_710077chr9_127182766_+intronic
CAediting_710078chr9_127182774_+intronic
CAediting_710079chr9_127182776_+intronic
CAediting_710080chr9_127182779_+intronic
CAediting_710081chr9_127182780_+intronic
CAediting_710082chr9_127182851_+intronic
CAediting_710083chr9_127182856_+intronic
CAediting_710084chr9_127182857_+intronic
CAediting_710085chr9_127182900_+intronic
CAediting_710086chr9_127182911_+intronic
CAediting_710087chr9_127183760_+intronic
CAediting_710088chr9_127183812_+intronic
CAediting_710089chr9_127183889_+exonic
CAediting_710090chr9_127183894_+exonic
CAediting_710091chr9_127183895_+exonic
CAediting_710092chr9_127183900_+exonic
CAediting_710093chr9_127183901_+exonic
CAediting_710094chr9_127183904_+exonic
CAediting_710095chr9_127183907_+exonic
CAediting_710096chr9_127183913_+exonic
CAediting_710097chr9_127183914_+exonic
CAediting_710098chr9_127183916_+exonic
CAediting_710099chr9_127183920_+exonic
CAediting_710100chr9_127183922_+exonic
CAediting_710101chr9_127183936_+exonic
CAediting_710102chr9_127184088_+exonic
CAediting_710103chr9_127184093_+exonic
CAediting_710104chr9_127184094_+exonic
CAediting_710105chr9_127184202_+UTR3
CAediting_710106chr9_127184230_+UTR3
CAediting_710107chr9_127188162_+intronic
CAediting_710108chr9_127188179_+intronic
CAediting_710109chr9_127188266_+intronic
CAediting_710110chr9_127188286_+intronic
CAediting_710111chr9_127188751_+intronic
CAediting_710112chr9_127188756_+intronic
CAediting_710113chr9_127188765_+intronic
CAediting_710114chr9_127188836_+intronic
CAediting_710115chr9_127188847_+intronic
CAediting_710116chr9_127188857_+intronic
CAediting_710117chr9_127188871_+intronic
CAediting_710118chr9_127188877_+intronic
CAediting_710119chr9_127188879_+intronic
CAediting_710120chr9_127188880_+intronic
CAediting_710121chr9_127188896_+intronic
CAediting_710122chr9_127188901_+intronic
CAediting_710123chr9_127188902_+intronic
CAediting_710124chr9_127188906_+intronic
CAediting_710125chr9_127188911_+intronic
CAediting_710126chr9_127188912_+intronic
CAediting_710127chr9_127188915_+intronic
CAediting_710128chr9_127188920_+intronic
CAediting_710129chr9_127188921_+intronic
CAediting_710130chr9_127188925_+intronic
CAediting_710131chr9_127188928_+intronic
CAediting_710132chr9_127188941_+intronic
CAediting_710133chr9_127188945_+intronic
CAediting_710134chr9_127188949_+intronic
CAediting_710135chr9_127188950_+intronic
CAediting_710136chr9_127188952_+intronic
CAediting_710137chr9_127188957_+intronic
CAediting_710138chr9_127188960_+intronic
CAediting_710139chr9_127188982_+intronic
CAediting_710140chr9_127188987_+intronic
CAediting_710141chr9_127190351_+intronic
CAediting_710142chr9_127190393_+intronic
CAediting_710143chr9_127190403_+intronic
CAediting_710144chr9_127190427_+intronic
CAediting_710145chr9_127190441_+intronic
CAediting_710146chr9_127190450_+intronic
CAediting_710147chr9_127190508_+intronic
CAediting_710148chr9_127192543_+intronic
CAediting_710149chr9_127196257_+intronic
CAediting_710150chr9_127196290_+intronic
CAediting_710151chr9_127196313_+intronic
CAediting_710152chr9_127203815_+intronic
CAediting_710153chr9_127203842_+intronic
CAediting_710154chr9_127203879_+intronic
CAediting_710155chr9_127203880_+intronic
CAediting_710156chr9_127204860_+intronic
CAediting_710157chr9_127205231_+intronic
CAediting_710158chr9_127205235_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_710034chr9_126946369_+SINEAluAluSx
CAediting_710035chr9_126966246_+SINEAluAluJo
CAediting_710036chr9_126966337_+SINEAluAluJo
CAediting_710037chr9_126966357_+SINEAluAluJo
CAediting_710038chr9_126966372_+SINEAluAluJo
CAediting_710039chr9_126966376_+SINEAluAluJo
CAediting_710040chr9_126966380_+SINEAluAluJo
CAediting_710041chr9_126966392_+SINEAluAluJo
CAediting_710042chr9_126966394_+SINEAluAluJo
CAediting_710043chr9_126966402_+SINEAluAluJo
CAediting_710044chr9_126966416_+SINEAluAluJo
CAediting_710045chr9_126966428_+SINEAluAluJo
CAediting_710046chr9_126966450_+SINEAluAluJo
CAediting_710047chr9_126966456_+SINEAluAluJo
CAediting_710048chr9_126966476_+SINEAluAluJo
CAediting_710049chr9_126968223_+SINEAluAluSc
CAediting_710050chr9_127000605_+SINEAluAluSp
CAediting_710051chr9_127001019_+SINEAluAluJr
CAediting_710052chr9_127001020_+SINEAluAluJr
CAediting_710053chr9_127001028_+SINEAluAluJr
CAediting_710054chr9_127001180_+SINEAluAluJr
CAediting_710055chr9_127001202_+SINEAluAluJr
CAediting_710056chr9_127001275_+SINEAluAluJr
CAediting_710057chr9_127032774_+SINEAluAluJr
CAediting_710058chr9_127040840_+LINEL1L1MC3
CAediting_710059chr9_127040985_+LINEL1L1MC3
CAediting_710060chr9_127041432_+LINEL1L1MC3
CAediting_710061chr9_127044030_+LINEL1L1MC3
CAediting_710062chr9_127044106_+LINEL1L1MC3
CAediting_710063chr9_127046654_+SINEAluAluJr
CAediting_710064chr9_127047611_+SINEAluAluSx
CAediting_710065chr9_127072236_+SINEAluAluJo
CAediting_710066chr9_127173945_+SINEAluAluSz
CAediting_710071chr9_127182082_+SINEAluAluJo
CAediting_710072chr9_127182083_+SINEAluAluJo
CAediting_710073chr9_127182232_+LTRERVL-MaLRMSTB
CAediting_710074chr9_127182299_+LTRERVL-MaLRMSTB
CAediting_710075chr9_127182703_+SINEAluAluSx1
CAediting_710076chr9_127182749_+LTRERVL-MaLRMSTB
CAediting_710077chr9_127182766_+LTRERVL-MaLRMSTB
CAediting_710078chr9_127182774_+LTRERVL-MaLRMSTB
CAediting_710079chr9_127182776_+LTRERVL-MaLRMSTB
CAediting_710080chr9_127182779_+LTRERVL-MaLRMSTB
CAediting_710081chr9_127182780_+LTRERVL-MaLRMSTB
CAediting_710082chr9_127182851_+LTRERVL-MaLRMSTB
CAediting_710083chr9_127182856_+LTRERVL-MaLRMSTB
CAediting_710084chr9_127182857_+LTRERVL-MaLRMSTB
CAediting_710085chr9_127182900_+LTRERVL-MaLRMSTB
CAediting_710086chr9_127182911_+LTRERVL-MaLRMSTB
CAediting_710102chr9_127184088_+SINEAluAluJb
CAediting_710103chr9_127184093_+SINEAluAluJb
CAediting_710104chr9_127184094_+SINEAluAluJb
CAediting_710105chr9_127184202_+SINEAluAluJb
CAediting_710106chr9_127184230_+SINEAluAluJb
CAediting_710107chr9_127188162_+SINEAluAluSx3
CAediting_710108chr9_127188179_+SINEAluAluSx3
CAediting_710109chr9_127188266_+SINEAluAluSx3
CAediting_710110chr9_127188286_+SINEAluAluSx3
CAediting_710111chr9_127188751_+SINEAluAluSz6
CAediting_710112chr9_127188756_+SINEAluAluSz6
CAediting_710113chr9_127188765_+SINEAluAluSz6
CAediting_710114chr9_127188836_+SINEAluAluSz6
CAediting_710115chr9_127188847_+SINEAluAluSz6
CAediting_710116chr9_127188857_+SINEAluAluSz6
CAediting_710117chr9_127188871_+SINEAluAluSz6
CAediting_710118chr9_127188877_+SINEAluAluSz6
CAediting_710119chr9_127188879_+SINEAluAluSz6
CAediting_710120chr9_127188880_+SINEAluAluSz6
CAediting_710121chr9_127188896_+SINEAluAluSz6
CAediting_710122chr9_127188901_+SINEAluAluSz6
CAediting_710123chr9_127188902_+SINEAluAluSz6
CAediting_710124chr9_127188906_+SINEAluAluSz6
CAediting_710125chr9_127188911_+SINEAluAluSz6
CAediting_710126chr9_127188912_+SINEAluAluSz6
CAediting_710127chr9_127188915_+SINEAluAluSz6
CAediting_710128chr9_127188920_+SINEAluAluSz6
CAediting_710129chr9_127188921_+SINEAluAluSz6
CAediting_710130chr9_127188925_+SINEAluAluSz6
CAediting_710131chr9_127188928_+SINEAluAluSz6
CAediting_710132chr9_127188941_+SINEAluAluSz6
CAediting_710133chr9_127188945_+SINEAluAluSz6
CAediting_710134chr9_127188949_+SINEAluAluSz6
CAediting_710135chr9_127188950_+SINEAluAluSz6
CAediting_710136chr9_127188952_+SINEAluAluSz6
CAediting_710137chr9_127188957_+SINEAluAluSz6
CAediting_710138chr9_127188960_+SINEAluAluSz6
CAediting_710139chr9_127188982_+SINEAluAluSz6
CAediting_710140chr9_127188987_+SINEAluAluSz6
CAediting_710141chr9_127190351_+SINEAluAluJb
CAediting_710142chr9_127190393_+SINEAluAluJb
CAediting_710143chr9_127190403_+SINEAluAluJb
CAediting_710144chr9_127190427_+SINEAluAluJb
CAediting_710145chr9_127190441_+SINEAluAluJb
CAediting_710146chr9_127190450_+SINEAluAluJb
CAediting_710147chr9_127190508_+SINEAluAluJb
CAediting_710148chr9_127192543_+SINEAluAluJb
CAediting_710149chr9_127196257_+SINEMIRMIRc
CAediting_710150chr9_127196290_+SINEMIRMIRc
CAediting_710151chr9_127196313_+SINEMIRMIRc

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RNA A-to-I editing events in the alternative splicing sites for RALGPS1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000136828.17.RALGPS1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000136828.17.RALGPS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RALGPS1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RALGPS1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for RALGPS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-10394-5p1271841981271842047mer-m8127184180127184205145.00-22.96
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-12051271841981271842047mer-m8127184186127184205140.00-15.56
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-42691271841951271842017mer-m8127184182127184202159.00-23.62
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-6511b-5p1271841971271842037mer-m8127184181127184204145.00-20.30
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-6511b-5p1271841971271842037mer-m8127184181127184204145.00-20.30
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-6715b-5p1271841951271842017mer-m8127184181127184202153.00-21.03
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-6811-5p1271841971271842037mer-m8127184184127184204154.00-19.40

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_710105chr9_127184202_+ENSG00000136828.17ENST00000394022hsa-miR-4423-3p1271841951271842017mer-m8127184182127184202145-13.76

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000136828.17ENST00000394011hsa-miR-624-3p1269900911269900977mer-m8126990080126990098147-17.74
CAediting_748296chr10_51299626_+ENSG00000136828.17ENST00000438723hsa-miR-605-3p1272221531272221608mer-1a127222138127222160158-20.12
CAediting_980496chr14_31014685_-ENSG00000136828.17ENST00000438723hsa-miR-624-3p1272211941272212007mer-m8127221180127221201142-18.4
CAediting_393chr1_1167164_+ENSG00000136828.17ENST00000438723hsa-miR-200b-3p1272227761272227816mer127222761127222782140-14.08
CAediting_1368054chr19_46709310_-ENSG00000136828.17ENST00000394022hsa-miR-320e1271842071271842137mer-m8127184195127184214148-21.7
CAediting_573000chr7_92204081_-ENSG00000136828.17ENST00000394022hsa-miR-1285-5p1271842261271842327mer-m8127184215127184233151-25.44
CAediting_1229413chr17_67471544_+ENSG00000136828.17ENST00000394011hsa-miR-548aa1269901841269901907mer-m8126990167126990191159-15.08
CAediting_524911chr7_5495852_-ENSG00000136828.17ENST00000394011hsa-miR-589-3p1269900351269900428mer-1a126990018126990042149-27.24
CAediting_1229413chr17_67471544_+ENSG00000136828.17ENST00000438723hsa-miR-548aa1272202201272202278mer-1a127220206127220227154-15.82
CAediting_1229413chr17_67471544_+ENSG00000136828.17ENST00000438723hsa-miR-548aa1272220161272220238mer-1a127221999127222023145-11.54
CAediting_1160181chr17_7017644_-ENSG00000136828.17ENST00000438723hsa-miR-195-3p1272214471272214537mer-m8127221435127221454152-16.82
CAediting_396018chr5_1062918_-ENSG00000136828.17ENST00000438723hsa-miR-46351272202571272202648mer-1a127220244127220264144-15.9
CAediting_524911chr7_5495852_-ENSG00000136828.17ENST00000438723hsa-miR-589-3p1272205521272205587mer-m8127220539127220559146-21.9
CAediting_524911chr7_5495852_-ENSG00000136828.17ENST00000438723hsa-miR-589-3p1272218691272218757mer-m8127221853127221876162-17.26
CAediting_468389chr6_31355314_-ENSG00000136828.17ENST00000438723hsa-miR-6891-5p1272196341272196407mer-m8127219624127219641147-22.75

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1368054chr19_46709310_-ENSG00000136828.17ENST00000394022hsa-miR-320e1271842871271842937mer-m8127184277127184294146-16.99
CAediting_1306324chr19_13836464_-ENSG00000136828.17ENST00000438723hsa-miR-27a-3p1272202141272202196mer127220200127220220143-18.51
CAediting_1306324chr19_13836464_-ENSG00000136828.17ENST00000438723hsa-miR-27a-3p1272226851272226917mer-m8127222672127222692152-12.7
CAediting_1368054chr19_46709310_-ENSG00000136828.17ENST00000438723hsa-miR-320e1272219881272219936mer127221977127221994142-15.48
CAediting_1054808chr15_66496985_-ENSG00000136828.17ENST00000438723hsa-miR-45121272193481272193547mer-m8127219334127219355150-22.7
CAediting_1054808chr15_66496985_-ENSG00000136828.17ENST00000438723hsa-miR-45121272196301272196367mer-m8127219616127219637150-22.83
CAediting_396018chr5_1062918_-ENSG00000136828.17ENST00000438723hsa-miR-46351272192891272192968mer-1a127219274127219296148-18.53
CAediting_1229413chr17_67471544_+ENSG00000136828.17ENST00000438723hsa-miR-548aa1272208001272208067mer-m8127220785127220807154-11.55
CAediting_1229415chr17_67471547_+ENSG00000136828.17ENST00000438723hsa-miR-548aa1272208001272208067mer-m8127220785127220807154-11.55
CAediting_1229414chr17_67471546_+ENSG00000136828.17ENST00000438723hsa-miR-548aa1272208001272208067mer-m8127220785127220807154-11.55
CAediting_980496chr14_31014685_-ENSG00000136828.17ENST00000438723hsa-miR-624-3p1272200321272200387mer-m8127220018127220039150-14.66
CAediting_1351755chr19_40282625_-ENSG00000136828.17ENST00000438723hsa-miR-6411272194731272194786mer127219457127219479142-12.24
CAediting_580943chr7_100356700_+ENSG00000136828.17ENST00000438723hsa-miR-6840-3p1272228891272228957mer-m8127222874127222896146-25.46
CAediting_580943chr7_100356700_+ENSG00000136828.17ENST00000438723hsa-miR-6840-3p1272188391272188457mer-m8127218824127218846152-22.32
CAediting_468389chr6_31355314_-ENSG00000136828.17ENST00000438723hsa-miR-6891-5p1272197811272197866mer127219769127219787141-24.99
CAediting_468389chr6_31355314_-ENSG00000136828.17ENST00000438723hsa-miR-6891-5p1272222011272222077mer-1a127222189127222207141-19.11

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RALGPS1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for RALGPS1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for RALGPS1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for RALGPS1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for RALGPS1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for RALGPS1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
RALGPS1C0005684Malignant neoplasm of urinary bladder1CTD_human
RALGPS1C0005695Bladder Neoplasm1CTD_human