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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: GCC2 (CAeditome ID:9648)

Gene summary for GCC2

check button Gene summary
Gene informationGene symbol

GCC2

Gene ID

9648

Gene nameGRIP and coiled-coil domain containing 2
SynonymsGCC185|RANBP2L4|REN53
Cytomap

2q12.3

Type of geneprotein-coding
DescriptionGRIP and coiled-coil domain-containing protein 2185 kDa Golgi coiled-coil proteinCLL-associated antigen KW-11CTCL tumor antigen se1-1GCC protein, 185-kDGolgi coiled-coil protein GCC185Ran-binding protein 2-like 4renal carcinoma antigen NY-REN-53
Modification date20210518
UniProtAcc

Q8IWJ2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
GCC2

GO:0005654

GRIP and coiled-coil domain-containing protein 2

0000052

GCC2

GO:0005794

GRIP and coiled-coil domain-containing protein 2

0000052

GCC2

GO:0005794

GRIP and coiled-coil domain-containing protein 2

18243103

GCC2

GO:0005802

GRIP and coiled-coil domain-containing protein 2

16885419

GCC2

GO:0005802

GRIP and coiled-coil domain-containing protein 2

17488291


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RNA A-to-I events for GCC2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000135968.18

check button RNA A-to-I editing events in Cancer.
CAediting_205526(108452788, +), CAediting_205527(108452811, +), CAediting_205528(108452873, +), CAediting_205529(108452881, +), CAediting_205530(108452904, +), CAediting_205531(108452954, +), CAediting_205532(108452966, +), CAediting_205533(108453513, +), CAediting_205534(108453523, +), CAediting_205535(108453559, +), CAediting_205536(108453598, +), CAediting_205537(108453609, +), CAediting_205538(108453620, +), CAediting_205539(108453626, +), CAediting_205540(108453627, +), CAediting_205541(108453638, +), CAediting_205542(108453658, +), CAediting_205543(108453663, +), CAediting_205544(108453664, +), CAediting_205545(108453665, +), CAediting_205546(108453671, +), CAediting_205547(108453674, +), CAediting_205548(108453678, +), CAediting_205549(108453687, +), CAediting_205550(108453691, +), CAediting_205551(108453694, +), CAediting_205552(108453705, +), CAediting_205553(108453706, +), CAediting_205554(108453710, +), CAediting_205555(108453717, +), CAediting_205556(108453720, +), CAediting_205557(108453726, +), CAediting_205558(108453730, +), CAediting_205559(108453735, +), CAediting_205560(108453737, +), CAediting_205561(108453772, +), CAediting_205562(108453773, +), CAediting_205563(108454034, +), CAediting_205564(108454052, +), CAediting_205565(108454055, +), CAediting_205566(108454071, +), CAediting_205567(108454120, +), CAediting_205568(108454197, +), CAediting_205569(108454912, +), CAediting_205570(108454957, +), CAediting_205571(108455176, +), CAediting_205572(108455178, +), CAediting_205573(108455184, +), CAediting_205574(108455185, +), CAediting_205575(108455230, +), CAediting_205576(108455244, +), CAediting_205577(108455253, +), CAediting_205578(108455254, +), CAediting_205579(108455269, +), CAediting_205580(108455275, +), CAediting_205581(108455280, +), CAediting_205582(108455281, +), CAediting_205583(108455282, +), CAediting_205584(108455284, +), CAediting_205585(108455286, +), CAediting_205586(108455287, +), CAediting_205587(108455290, +), CAediting_205588(108455293, +), CAediting_205589(108455297, +), CAediting_205590(108455319, +), CAediting_205591(108455325, +), CAediting_205592(108455329, +), CAediting_205593(108455341, +), CAediting_205594(108455345, +), CAediting_205595(108455347, +), CAediting_205596(108455348, +), CAediting_205597(108455364, +), CAediting_205598(108455367, +), CAediting_205599(108455371, +), CAediting_205600(108455393, +), CAediting_205601(108455418, +), CAediting_205602(108455419, +), CAediting_205603(108455421, +), CAediting_205604(108455440, +), CAediting_205605(108455443, +), CAediting_205606(108456192, +), CAediting_205607(108456713, +), CAediting_205608(108456736, +), CAediting_205609(108456785, +), CAediting_205610(108456806, +), CAediting_205611(108456828, +), CAediting_205612(108456874, +), CAediting_205613(108456906, +), CAediting_205614(108460893, +), CAediting_205615(108461014, +), CAediting_205616(108461536, +), CAediting_205617(108461642, +), CAediting_205618(108462702, +), CAediting_205619(108464799, +), CAediting_205620(108464803, +), CAediting_205621(108464808, +), CAediting_205622(108464888, +), CAediting_205623(108465085, +), CAediting_205624(108465098, +), CAediting_205625(108465124, +), CAediting_205626(108465131, +), CAediting_205627(108473890, +), CAediting_205628(108474047, +), CAediting_205629(108474068, +), CAediting_205630(108474075, +), CAediting_205631(108474090, +), CAediting_205632(108476189, +), CAediting_205633(108476338, +), CAediting_205634(108477812, +), CAediting_205635(108477899, +), CAediting_205636(108477915, +), CAediting_205637(108479457, +), CAediting_205638(108479464, +), CAediting_205639(108479465, +), CAediting_205640(108479510, +), CAediting_205641(108479530, +), CAediting_205642(108479728, +), CAediting_205643(108479735, +), CAediting_205644(108479781, +), CAediting_205645(108479796, +), CAediting_205646(108479804, +), CAediting_205647(108479805, +), CAediting_205648(108479831, +), CAediting_205649(108479835, +), CAediting_205650(108479839, +), CAediting_205651(108479848, +), CAediting_205652(108479851, +), CAediting_205653(108479861, +), CAediting_205654(108479871, +), CAediting_205655(108479884, +), CAediting_205656(108479897, +), CAediting_205657(108479903, +), CAediting_205658(108479908, +), CAediting_205659(108479926, +), CAediting_205660(108479927, +), CAediting_205661(108479931, +), CAediting_205662(108479937, +), CAediting_205663(108493176, +), CAediting_205664(108493304, +), CAediting_205665(108494135, +), CAediting_205666(108494246, +), CAediting_205667(108494263, +), CAediting_205668(108494306, +), CAediting_205669(108494324, +), CAediting_205670(108494957, +), CAediting_205671(108495001, +), CAediting_205672(108495063, +), CAediting_205673(108500236, +), CAediting_205674(108500259, +), CAediting_205675(108500433, +), CAediting_205676(108500434, +), CAediting_205677(108500445, +), CAediting_205678(108501021, +), CAediting_205679(108501035, +), CAediting_205680(108501096, +), CAediting_205681(108501122, +), CAediting_205682(108501125, +), CAediting_205683(108501167, +), CAediting_205684(108501170, +), CAediting_205685(108501246, +), CAediting_205686(108501247, +), CAediting_205687(108502619, +), CAediting_205688(108502642, +), CAediting_205689(108502666, +), CAediting_205690(108502668, +), CAediting_205691(108502674, +), CAediting_205692(108502675, +), CAediting_205693(108502682, +), CAediting_205694(108502690, +), CAediting_205695(108502737, +), CAediting_205696(108502747, +), CAediting_205697(108502758, +), CAediting_205698(108502802, +), CAediting_205699(108502803, +), CAediting_205700(108502812, +), CAediting_205701(108502825, +), CAediting_205702(108502835, +), CAediting_205703(108502843, +), CAediting_205704(108502844, +), CAediting_205705(108502855, +), CAediting_205706(108502864, +), CAediting_205707(108502902, +), CAediting_205708(108502912, +), CAediting_205709(108503859, +), CAediting_205710(108503880, +), CAediting_205711(108503985, +), CAediting_205712(108503987, +), CAediting_205713(108503993, +), CAediting_205714(108503997, +), CAediting_205715(108504009, +), CAediting_205716(108504014, +), CAediting_205717(108504017, +), CAediting_205718(108504033, +), CAediting_205719(108504067, +), CAediting_205720(108504077, +), CAediting_205721(108507183, +), CAediting_205722(108507229, +), CAediting_205723(108507305, +), CAediting_205724(108507309, +),

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RNA editing positional annotations for GCC2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_205526chr2_108452788_+ncRNA_intronic
CAediting_205527chr2_108452811_+ncRNA_intronic
CAediting_205528chr2_108452873_+ncRNA_intronic
CAediting_205529chr2_108452881_+ncRNA_intronic
CAediting_205530chr2_108452904_+ncRNA_intronic
CAediting_205531chr2_108452954_+ncRNA_intronic
CAediting_205532chr2_108452966_+ncRNA_intronic
CAediting_205533chr2_108453513_+ncRNA_intronic
CAediting_205534chr2_108453523_+ncRNA_intronic
CAediting_205535chr2_108453559_+ncRNA_intronic
CAediting_205536chr2_108453598_+ncRNA_intronic
CAediting_205537chr2_108453609_+ncRNA_intronic
CAediting_205538chr2_108453620_+ncRNA_intronic
CAediting_205539chr2_108453626_+ncRNA_intronic
CAediting_205540chr2_108453627_+ncRNA_intronic
CAediting_205541chr2_108453638_+ncRNA_intronic
CAediting_205542chr2_108453658_+ncRNA_intronic
CAediting_205543chr2_108453663_+ncRNA_intronic
CAediting_205544chr2_108453664_+ncRNA_intronic
CAediting_205545chr2_108453665_+ncRNA_intronic
CAediting_205546chr2_108453671_+ncRNA_intronic
CAediting_205547chr2_108453674_+ncRNA_intronic
CAediting_205548chr2_108453678_+ncRNA_intronic
CAediting_205549chr2_108453687_+ncRNA_intronic
CAediting_205550chr2_108453691_+ncRNA_intronic
CAediting_205551chr2_108453694_+ncRNA_intronic
CAediting_205552chr2_108453705_+ncRNA_intronic
CAediting_205553chr2_108453706_+ncRNA_intronic
CAediting_205554chr2_108453710_+ncRNA_intronic
CAediting_205555chr2_108453717_+ncRNA_intronic
CAediting_205556chr2_108453720_+ncRNA_intronic
CAediting_205557chr2_108453726_+ncRNA_intronic
CAediting_205558chr2_108453730_+ncRNA_intronic
CAediting_205559chr2_108453735_+ncRNA_intronic
CAediting_205560chr2_108453737_+ncRNA_intronic
CAediting_205561chr2_108453772_+ncRNA_intronic
CAediting_205562chr2_108453773_+ncRNA_intronic
CAediting_205563chr2_108454034_+ncRNA_intronic
CAediting_205564chr2_108454052_+ncRNA_intronic
CAediting_205565chr2_108454055_+ncRNA_intronic
CAediting_205566chr2_108454071_+ncRNA_intronic
CAediting_205567chr2_108454120_+ncRNA_intronic
CAediting_205568chr2_108454197_+ncRNA_intronic
CAediting_205569chr2_108454912_+ncRNA_intronic
CAediting_205570chr2_108454957_+ncRNA_intronic
CAediting_205571chr2_108455176_+ncRNA_intronic
CAediting_205572chr2_108455178_+ncRNA_intronic
CAediting_205573chr2_108455184_+ncRNA_intronic
CAediting_205574chr2_108455185_+ncRNA_intronic
CAediting_205575chr2_108455230_+ncRNA_intronic
CAediting_205576chr2_108455244_+ncRNA_intronic
CAediting_205577chr2_108455253_+ncRNA_intronic
CAediting_205578chr2_108455254_+ncRNA_intronic
CAediting_205579chr2_108455269_+ncRNA_intronic
CAediting_205580chr2_108455275_+ncRNA_intronic
CAediting_205581chr2_108455280_+ncRNA_intronic
CAediting_205582chr2_108455281_+ncRNA_intronic
CAediting_205583chr2_108455282_+ncRNA_intronic
CAediting_205584chr2_108455284_+ncRNA_intronic
CAediting_205585chr2_108455286_+ncRNA_intronic
CAediting_205586chr2_108455287_+ncRNA_intronic
CAediting_205587chr2_108455290_+ncRNA_intronic
CAediting_205588chr2_108455293_+ncRNA_intronic
CAediting_205589chr2_108455297_+ncRNA_intronic
CAediting_205590chr2_108455319_+ncRNA_intronic
CAediting_205591chr2_108455325_+ncRNA_intronic
CAediting_205592chr2_108455329_+ncRNA_intronic
CAediting_205593chr2_108455341_+ncRNA_intronic
CAediting_205594chr2_108455345_+ncRNA_intronic
CAediting_205595chr2_108455347_+ncRNA_intronic
CAediting_205596chr2_108455348_+ncRNA_intronic
CAediting_205597chr2_108455364_+ncRNA_intronic
CAediting_205598chr2_108455367_+ncRNA_intronic
CAediting_205599chr2_108455371_+ncRNA_intronic
CAediting_205600chr2_108455393_+ncRNA_intronic
CAediting_205601chr2_108455418_+ncRNA_intronic
CAediting_205602chr2_108455419_+ncRNA_intronic
CAediting_205603chr2_108455421_+ncRNA_intronic
CAediting_205604chr2_108455440_+ncRNA_intronic
CAediting_205605chr2_108455443_+ncRNA_intronic
CAediting_205606chr2_108456192_+ncRNA_intronic
CAediting_205607chr2_108456713_+ncRNA_intronic
CAediting_205608chr2_108456736_+ncRNA_intronic
CAediting_205609chr2_108456785_+ncRNA_intronic
CAediting_205610chr2_108456806_+ncRNA_intronic
CAediting_205611chr2_108456828_+ncRNA_intronic
CAediting_205612chr2_108456874_+ncRNA_intronic
CAediting_205613chr2_108456906_+ncRNA_intronic
CAediting_205614chr2_108460893_+ncRNA_intronic
CAediting_205615chr2_108461014_+ncRNA_intronic
CAediting_205616chr2_108461536_+ncRNA_intronic
CAediting_205617chr2_108461642_+ncRNA_intronic
CAediting_205618chr2_108462702_+ncRNA_intronic
CAediting_205619chr2_108464799_+ncRNA_intronic
CAediting_205620chr2_108464803_+ncRNA_intronic
CAediting_205621chr2_108464808_+ncRNA_intronic
CAediting_205622chr2_108464888_+ncRNA_intronic
CAediting_205623chr2_108465085_+ncRNA_intronic
CAediting_205624chr2_108465098_+ncRNA_intronic
CAediting_205625chr2_108465124_+ncRNA_intronic
CAediting_205626chr2_108465131_+ncRNA_intronic
CAediting_205627chr2_108473890_+intronic
CAediting_205628chr2_108474047_+intronic
CAediting_205629chr2_108474068_+intronic
CAediting_205630chr2_108474075_+intronic
CAediting_205631chr2_108474090_+intronic
CAediting_205632chr2_108476189_+intronic
CAediting_205633chr2_108476338_+intronic
CAediting_205634chr2_108477812_+intronic
CAediting_205635chr2_108477899_+intronic
CAediting_205636chr2_108477915_+intronic
CAediting_205637chr2_108479457_+intronic
CAediting_205638chr2_108479464_+intronic
CAediting_205639chr2_108479465_+intronic
CAediting_205640chr2_108479510_+intronic
CAediting_205641chr2_108479530_+intronic
CAediting_205642chr2_108479728_+intronic
CAediting_205643chr2_108479735_+intronic
CAediting_205644chr2_108479781_+intronic
CAediting_205645chr2_108479796_+intronic
CAediting_205646chr2_108479804_+intronic
CAediting_205647chr2_108479805_+intronic
CAediting_205648chr2_108479831_+intronic
CAediting_205649chr2_108479835_+intronic
CAediting_205650chr2_108479839_+intronic
CAediting_205651chr2_108479848_+intronic
CAediting_205652chr2_108479851_+intronic
CAediting_205653chr2_108479861_+intronic
CAediting_205654chr2_108479871_+intronic
CAediting_205655chr2_108479884_+intronic
CAediting_205656chr2_108479897_+intronic
CAediting_205657chr2_108479903_+intronic
CAediting_205658chr2_108479908_+intronic
CAediting_205659chr2_108479926_+intronic
CAediting_205660chr2_108479927_+intronic
CAediting_205661chr2_108479931_+intronic
CAediting_205662chr2_108479937_+intronic
CAediting_205663chr2_108493176_+intronic
CAediting_205664chr2_108493304_+ncRNA_exonic
CAediting_205665chr2_108494135_+ncRNA_exonic
CAediting_205666chr2_108494246_+ncRNA_exonic
CAediting_205667chr2_108494263_+ncRNA_exonic
CAediting_205668chr2_108494306_+ncRNA_exonic
CAediting_205669chr2_108494324_+ncRNA_exonic
CAediting_205670chr2_108494957_+ncRNA_exonic
CAediting_205671chr2_108495001_+ncRNA_exonic
CAediting_205672chr2_108495063_+ncRNA_exonic
CAediting_205673chr2_108500236_+ncRNA_intronic
CAediting_205674chr2_108500259_+ncRNA_intronic
CAediting_205675chr2_108500433_+ncRNA_intronic
CAediting_205676chr2_108500434_+ncRNA_intronic
CAediting_205677chr2_108500445_+ncRNA_intronic
CAediting_205678chr2_108501021_+ncRNA_intronic
CAediting_205679chr2_108501035_+ncRNA_intronic
CAediting_205680chr2_108501096_+ncRNA_intronic
CAediting_205681chr2_108501122_+ncRNA_intronic
CAediting_205682chr2_108501125_+ncRNA_intronic
CAediting_205683chr2_108501167_+ncRNA_intronic
CAediting_205684chr2_108501170_+ncRNA_intronic
CAediting_205685chr2_108501246_+ncRNA_intronic
CAediting_205686chr2_108501247_+ncRNA_intronic
CAediting_205687chr2_108502619_+ncRNA_intronic
CAediting_205688chr2_108502642_+ncRNA_intronic
CAediting_205689chr2_108502666_+ncRNA_intronic
CAediting_205690chr2_108502668_+ncRNA_intronic
CAediting_205691chr2_108502674_+ncRNA_intronic
CAediting_205692chr2_108502675_+ncRNA_intronic
CAediting_205693chr2_108502682_+ncRNA_intronic
CAediting_205694chr2_108502690_+ncRNA_intronic
CAediting_205695chr2_108502737_+ncRNA_intronic
CAediting_205696chr2_108502747_+ncRNA_intronic
CAediting_205697chr2_108502758_+ncRNA_intronic
CAediting_205698chr2_108502802_+ncRNA_intronic
CAediting_205699chr2_108502803_+ncRNA_intronic
CAediting_205700chr2_108502812_+ncRNA_intronic
CAediting_205701chr2_108502825_+ncRNA_intronic
CAediting_205702chr2_108502835_+ncRNA_intronic
CAediting_205703chr2_108502843_+ncRNA_intronic
CAediting_205704chr2_108502844_+ncRNA_intronic
CAediting_205705chr2_108502855_+ncRNA_intronic
CAediting_205706chr2_108502864_+ncRNA_intronic
CAediting_205707chr2_108502902_+ncRNA_intronic
CAediting_205708chr2_108502912_+ncRNA_intronic
CAediting_205709chr2_108503859_+ncRNA_intronic
CAediting_205710chr2_108503880_+ncRNA_intronic
CAediting_205711chr2_108503985_+ncRNA_intronic
CAediting_205712chr2_108503987_+ncRNA_intronic
CAediting_205713chr2_108503993_+ncRNA_intronic
CAediting_205714chr2_108503997_+ncRNA_intronic
CAediting_205715chr2_108504009_+ncRNA_intronic
CAediting_205716chr2_108504014_+ncRNA_intronic
CAediting_205717chr2_108504017_+ncRNA_intronic
CAediting_205718chr2_108504033_+ncRNA_intronic
CAediting_205719chr2_108504067_+ncRNA_intronic
CAediting_205720chr2_108504077_+ncRNA_intronic
CAediting_205721chr2_108507183_+ncRNA_intronic
CAediting_205722chr2_108507229_+ncRNA_intronic
CAediting_205723chr2_108507305_+ncRNA_intronic
CAediting_205724chr2_108507309_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_205526chr2_108452788_+SINEAluAluSc
CAediting_205527chr2_108452811_+SINEAluAluSc
CAediting_205528chr2_108452873_+SINEAluAluSc
CAediting_205529chr2_108452881_+SINEAluAluSc
CAediting_205530chr2_108452904_+SINEAluAluSc
CAediting_205531chr2_108452954_+SINEAluAluSc
CAediting_205532chr2_108452966_+SINEAluAluSc
CAediting_205533chr2_108453513_+SINEAluAluSz
CAediting_205534chr2_108453523_+SINEAluAluSz
CAediting_205535chr2_108453559_+SINEAluAluSz
CAediting_205536chr2_108453598_+SINEAluAluSz
CAediting_205537chr2_108453609_+SINEAluAluSz
CAediting_205538chr2_108453620_+SINEAluAluSz
CAediting_205539chr2_108453626_+SINEAluAluSz
CAediting_205540chr2_108453627_+SINEAluAluSz
CAediting_205541chr2_108453638_+SINEAluAluSz
CAediting_205542chr2_108453658_+SINEAluAluSz
CAediting_205543chr2_108453663_+SINEAluAluSz
CAediting_205544chr2_108453664_+SINEAluAluSz
CAediting_205545chr2_108453665_+SINEAluAluSz
CAediting_205546chr2_108453671_+SINEAluAluSz
CAediting_205547chr2_108453674_+SINEAluAluSz
CAediting_205548chr2_108453678_+SINEAluAluSz
CAediting_205549chr2_108453687_+SINEAluAluSz
CAediting_205550chr2_108453691_+SINEAluAluSz
CAediting_205551chr2_108453694_+SINEAluAluSz
CAediting_205552chr2_108453705_+SINEAluAluSz
CAediting_205553chr2_108453706_+SINEAluAluSz
CAediting_205554chr2_108453710_+SINEAluAluSz
CAediting_205555chr2_108453717_+SINEAluAluSz
CAediting_205556chr2_108453720_+SINEAluAluSz
CAediting_205557chr2_108453726_+SINEAluAluSz
CAediting_205558chr2_108453730_+SINEAluAluSz
CAediting_205559chr2_108453735_+SINEAluAluSz
CAediting_205560chr2_108453737_+SINEAluAluSz
CAediting_205561chr2_108453772_+SINEAluAluSz
CAediting_205562chr2_108453773_+SINEAluAluSz
CAediting_205563chr2_108454034_+SINEAluAluY
CAediting_205564chr2_108454052_+SINEAluAluY
CAediting_205565chr2_108454055_+SINEAluAluY
CAediting_205566chr2_108454071_+SINEAluAluY
CAediting_205567chr2_108454120_+SINEAluAluY
CAediting_205568chr2_108454197_+SINEAluAluY
CAediting_205569chr2_108454912_+SINEAluAluSz6
CAediting_205570chr2_108454957_+SINEAluAluSz6
CAediting_205571chr2_108455176_+SINEAluAluSx
CAediting_205572chr2_108455178_+SINEAluAluSx
CAediting_205573chr2_108455184_+SINEAluAluSx
CAediting_205574chr2_108455185_+SINEAluAluSx
CAediting_205575chr2_108455230_+SINEAluAluSx
CAediting_205576chr2_108455244_+SINEAluAluSx
CAediting_205577chr2_108455253_+SINEAluAluSx
CAediting_205578chr2_108455254_+SINEAluAluSx
CAediting_205579chr2_108455269_+SINEAluAluSx
CAediting_205580chr2_108455275_+SINEAluAluSx
CAediting_205581chr2_108455280_+SINEAluAluSx
CAediting_205582chr2_108455281_+SINEAluAluSx
CAediting_205583chr2_108455282_+SINEAluAluSx
CAediting_205584chr2_108455284_+SINEAluAluSx
CAediting_205585chr2_108455286_+SINEAluAluSx
CAediting_205586chr2_108455287_+SINEAluAluSx
CAediting_205587chr2_108455290_+SINEAluAluSx
CAediting_205588chr2_108455293_+SINEAluAluSx
CAediting_205589chr2_108455297_+SINEAluAluSx
CAediting_205590chr2_108455319_+SINEAluAluSx
CAediting_205591chr2_108455325_+SINEAluAluSx
CAediting_205592chr2_108455329_+SINEAluAluSx
CAediting_205593chr2_108455341_+SINEAluAluSx
CAediting_205594chr2_108455345_+SINEAluAluSx
CAediting_205595chr2_108455347_+SINEAluAluSx
CAediting_205596chr2_108455348_+SINEAluAluSx
CAediting_205597chr2_108455364_+SINEAluAluSx
CAediting_205598chr2_108455367_+SINEAluAluSx
CAediting_205599chr2_108455371_+SINEAluAluSx
CAediting_205600chr2_108455393_+SINEAluAluSx
CAediting_205601chr2_108455418_+SINEAluAluSx
CAediting_205602chr2_108455419_+SINEAluAluSx
CAediting_205603chr2_108455421_+SINEAluAluSx
CAediting_205604chr2_108455440_+SINEAluAluSx
CAediting_205605chr2_108455443_+SINEAluAluSx
CAediting_205606chr2_108456192_+SINEAluAluY
CAediting_205607chr2_108456713_+SINEAluAluJo
CAediting_205608chr2_108456736_+SINEAluAluJo
CAediting_205609chr2_108456785_+SINEAluAluJo
CAediting_205610chr2_108456806_+SINEAluAluJo
CAediting_205611chr2_108456828_+SINEAluAluJo
CAediting_205612chr2_108456874_+SINEAluAluJo
CAediting_205613chr2_108456906_+SINEAluAluJo
CAediting_205614chr2_108460893_+LTRERVL-MaLRMSTA
CAediting_205615chr2_108461014_+LTRERVL-MaLRMSTA
CAediting_205616chr2_108461536_+SINEAluAluSq
CAediting_205617chr2_108461642_+SINEAluAluSq
CAediting_205618chr2_108462702_+SINEAluAluSx1
CAediting_205619chr2_108464799_+LTRERVL-MaLRMSTB
CAediting_205620chr2_108464803_+LTRERVL-MaLRMSTB
CAediting_205621chr2_108464808_+LTRERVL-MaLRMSTB
CAediting_205622chr2_108464888_+LTRERVL-MaLRMSTB
CAediting_205623chr2_108465085_+LTRERVL-MaLRMSTB
CAediting_205624chr2_108465098_+LTRERVL-MaLRMSTB
CAediting_205625chr2_108465124_+LTRERVL-MaLRMSTB
CAediting_205626chr2_108465131_+LTRERVL-MaLRMSTB
CAediting_205627chr2_108473890_+SINEAluAluY
CAediting_205628chr2_108474047_+SINEAluAluY
CAediting_205629chr2_108474068_+SINEAluAluY
CAediting_205630chr2_108474075_+SINEAluAluY
CAediting_205631chr2_108474090_+SINEAluAluY
CAediting_205632chr2_108476189_+SINEAluAluSg
CAediting_205633chr2_108476338_+SINEAluAluSg
CAediting_205634chr2_108477812_+SINEAluAluSz6
CAediting_205635chr2_108477899_+SINEAluAluSz6
CAediting_205636chr2_108477915_+SINEAluAluSz6
CAediting_205637chr2_108479457_+SINEAluAluSx
CAediting_205638chr2_108479464_+SINEAluAluSx
CAediting_205639chr2_108479465_+SINEAluAluSx
CAediting_205640chr2_108479510_+SINEAluAluSx
CAediting_205641chr2_108479530_+SINEAluAluSx
CAediting_205642chr2_108479728_+SINEAluAluSx
CAediting_205643chr2_108479735_+SINEAluAluSx
CAediting_205644chr2_108479781_+SINEAluAluSx
CAediting_205645chr2_108479796_+SINEAluAluSx
CAediting_205646chr2_108479804_+SINEAluAluSx
CAediting_205647chr2_108479805_+SINEAluAluSx
CAediting_205648chr2_108479831_+SINEAluAluSx
CAediting_205649chr2_108479835_+SINEAluAluSx
CAediting_205650chr2_108479839_+SINEAluAluSx
CAediting_205651chr2_108479848_+SINEAluAluSx
CAediting_205652chr2_108479851_+SINEAluAluSx
CAediting_205653chr2_108479861_+SINEAluAluSx
CAediting_205654chr2_108479871_+SINEAluAluSx
CAediting_205655chr2_108479884_+SINEAluAluSx
CAediting_205656chr2_108479897_+SINEAluAluSx
CAediting_205657chr2_108479903_+SINEAluAluSx
CAediting_205658chr2_108479908_+SINEAluAluSx
CAediting_205659chr2_108479926_+SINEAluAluSx
CAediting_205660chr2_108479927_+SINEAluAluSx
CAediting_205661chr2_108479931_+SINEAluAluSx
CAediting_205662chr2_108479937_+SINEAluAluSx
CAediting_205663chr2_108493176_+SINEAluAluY
CAediting_205664chr2_108493304_+SINEAluAluY
CAediting_205665chr2_108494135_+SINEAluAluSx
CAediting_205666chr2_108494246_+SINEAluAluSx
CAediting_205667chr2_108494263_+SINEAluAluSx
CAediting_205668chr2_108494306_+SINEAluAluSx
CAediting_205669chr2_108494324_+SINEAluAluSx
CAediting_205670chr2_108494957_+SINEAluAluSg7
CAediting_205671chr2_108495001_+SINEAluAluSg7
CAediting_205672chr2_108495063_+SINEAluAluSg7
CAediting_205673chr2_108500236_+SINEAluAluSc
CAediting_205674chr2_108500259_+SINEAluAluSc
CAediting_205675chr2_108500433_+SINEAluAluSc
CAediting_205676chr2_108500434_+SINEAluAluSc
CAediting_205677chr2_108500445_+SINEAluAluSc
CAediting_205678chr2_108501021_+SINEAluAluSc
CAediting_205679chr2_108501035_+SINEAluAluSc
CAediting_205680chr2_108501096_+SINEAluAluSc
CAediting_205681chr2_108501122_+SINEAluAluSc
CAediting_205682chr2_108501125_+SINEAluAluSc
CAediting_205683chr2_108501167_+SINEAluAluSc
CAediting_205684chr2_108501170_+SINEAluAluSc
CAediting_205685chr2_108501246_+SINEAluAluSc
CAediting_205686chr2_108501247_+SINEAluAluSc
CAediting_205687chr2_108502619_+LINEL1L1MEg
CAediting_205688chr2_108502642_+LINEL1L1MEg
CAediting_205689chr2_108502666_+SINEAluAluSq2
CAediting_205690chr2_108502668_+SINEAluAluSq2
CAediting_205691chr2_108502674_+SINEAluAluSq2
CAediting_205692chr2_108502675_+SINEAluAluSq2
CAediting_205693chr2_108502682_+SINEAluAluSq2
CAediting_205694chr2_108502690_+SINEAluAluSq2
CAediting_205695chr2_108502737_+SINEAluAluSq2
CAediting_205696chr2_108502747_+SINEAluAluSq2
CAediting_205697chr2_108502758_+SINEAluAluSq2
CAediting_205698chr2_108502802_+SINEAluAluSq2
CAediting_205699chr2_108502803_+SINEAluAluSq2
CAediting_205700chr2_108502812_+SINEAluAluSq2
CAediting_205701chr2_108502825_+SINEAluAluSq2
CAediting_205702chr2_108502835_+SINEAluAluSq2
CAediting_205703chr2_108502843_+SINEAluAluSq2
CAediting_205704chr2_108502844_+SINEAluAluSq2
CAediting_205705chr2_108502855_+SINEAluAluSq2
CAediting_205706chr2_108502864_+SINEAluAluSq2
CAediting_205707chr2_108502902_+SINEAluAluSq2
CAediting_205708chr2_108502912_+SINEAluAluSq2
CAediting_205709chr2_108503859_+SINEAluAluJr4
CAediting_205710chr2_108503880_+SINEAluAluJr4
CAediting_205711chr2_108503985_+SINEAluAluJr4
CAediting_205712chr2_108503987_+SINEAluAluJr4
CAediting_205713chr2_108503993_+SINEAluAluJr4
CAediting_205714chr2_108503997_+SINEAluAluJr4
CAediting_205715chr2_108504009_+SINEAluAluJr4
CAediting_205716chr2_108504014_+SINEAluAluJr4
CAediting_205717chr2_108504017_+SINEAluAluJr4
CAediting_205718chr2_108504033_+SINEAluAluJr4
CAediting_205719chr2_108504067_+SINEAluAluJr4
CAediting_205720chr2_108504077_+SINEAluAluJr4
CAediting_205721chr2_108507183_+SINEAluAluJb
CAediting_205722chr2_108507229_+SINEAluAluJb
CAediting_205723chr2_108507305_+SINEAluAluJb
CAediting_205724chr2_108507309_+SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for GCC2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135968.18.GCC2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000135968.18.GCC2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GCC2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GCC2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GCC2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000135968.18ENST00000482325hsa-miR-200b-3p1084700101084700178mer-1a108469990108470017142-19
CAediting_393chr1_1167164_+ENSG00000135968.18ENST00000482325hsa-miR-200b-3p1085085991085086057mer-m8108508585108508606155-14.69
CAediting_1229415chr17_67471547_+ENSG00000135968.18ENST00000482325hsa-miR-548aa1084717271084717337mer-m8108471709108471734154-11.36
CAediting_1351755chr19_40282625_-ENSG00000135968.18ENST00000482325hsa-miR-6411084877821084877898mer-1a108487766108487789153-16.66
CAediting_1160181chr17_7017644_-ENSG00000135968.18ENST00000482325hsa-miR-195-3p1084899241084899307mer-m8108489910108489931152-7.9
CAediting_442554chr5_154685830_+ENSG00000135968.18ENST00000482325hsa-miR-13031084927361084927427mer-m8108492725108492743148-16.5
CAediting_1229413chr17_67471544_+ENSG00000135968.18ENST00000482325hsa-miR-548aa1085089531085089597mer-m8108508937108508960145-12.1
CAediting_1229413chr17_67471544_+ENSG00000135968.18ENST00000482325hsa-miR-548aa1085093321085093387mer-m8108509308108509339143-15.2
CAediting_1229415chr17_67471547_+ENSG00000135968.18ENST00000482325hsa-miR-548aa1085089241085089307mer-m8108508910108508931146-10.59
CAediting_1160181chr17_7017644_-ENSG00000135968.18ENST00000482325hsa-miR-195-3p1085089481085089547mer-m8108508936108508955153-19.19
CAediting_1368054chr19_46709310_-ENSG00000135968.18ENST00000482325hsa-miR-320e1085081131085081197mer-m8108508102108508120149-18.29
CAediting_228905chr2_188297554_+ENSG00000135968.18ENST00000482325hsa-miR-561-3p1085083601085083667mer-m8108508346108508367145-10.54
CAediting_1351755chr19_40282625_-ENSG00000135968.18ENST00000393321hsa-miR-6411084877821084877898mer-1a108487766108487789153-16.66
CAediting_1160181chr17_7017644_-ENSG00000135968.18ENST00000393321hsa-miR-195-3p1084899241084899307mer-m8108489910108489931152-7.9
CAediting_1524209chrX_134546392_-ENSG00000135968.18ENST00000482325hsa-miR-503-5p1084866391084866457mer-1a108486622108486645142-25.08
CAediting_1524209chrX_134546392_-ENSG00000135968.18ENST00000393321hsa-miR-503-5p1084866391084866457mer-1a108486622108486645142-25.08

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688080chr9_63819626_+ENSG00000135968.18ENST00000482325hsa-miR-4477b1084714841084714918mer-1a108471466108471491150-11.05
CAediting_846604chr11_93733708_-ENSG00000135968.18ENST00000482325hsa-miR-1304-3p1085080881085080936mer108508075108508094144-20.6
CAediting_1351755chr19_40282625_-ENSG00000135968.18ENST00000482325hsa-miR-6411085084881085084936mer108508473108508494147-23.32

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GCC2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000480863.1retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_205664ENST00000480863.1chr2_108493304_+-1721.90-1722.20-1759.00
CAediting_205665ENST00000480863.1chr2_108494135_+-1724.30-1722.20-1759.00
CAediting_205666ENST00000480863.1chr2_108494246_+-1726.00-1722.20-1759.00
CAediting_205667ENST00000480863.1chr2_108494263_+-1728.90-1722.20-1759.00
CAediting_205668ENST00000480863.1chr2_108494306_+-1728.40-1722.20-1759.00
CAediting_205669ENST00000480863.1chr2_108494324_+-1721.90-1722.20-1759.00
CAediting_205670ENST00000480863.1chr2_108494957_+-1726.00-1722.20-1759.00
CAediting_205671ENST00000480863.1chr2_108495001_+-1728.80-1722.20-1759.00
CAediting_205672ENST00000480863.1chr2_108495063_+-1728.80-1722.20-1759.00

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Relation with ADAR for GCC2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for GCC2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for GCC2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for GCC2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GCC2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource