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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: GMFG (CAeditome ID:9535)

Gene summary for GMFG

check button Gene summary
Gene informationGene symbol

GMFG

Gene ID

9535

Gene nameglia maturation factor gamma
SynonymsGMF-GAMMA
Cytomap

19q13.2

Type of geneprotein-coding
Descriptionglia maturation factor gamma
Modification date20210518
UniProtAcc

O60234

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for GMFG

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000130755.11

check button RNA A-to-I editing events in Cancer.
CAediting_1350032(39328644, -), CAediting_1350033(39328649, -), CAediting_1350034(39328661, -), CAediting_1350035(39328694, -), CAediting_1350036(39328722, -), CAediting_1350037(39328739, -), CAediting_1350038(39328757, -), CAediting_1350039(39328766, -), CAediting_1350040(39328791, -), CAediting_1350041(39328792, -), CAediting_1350042(39328795, -), CAediting_1350043(39328816, -), CAediting_1350044(39328878, -), CAediting_1350045(39329906, -), CAediting_1350046(39329916, -), CAediting_1350047(39329922, -), CAediting_1350048(39329931, -), CAediting_1350049(39329941, -), CAediting_1350050(39329979, -), CAediting_1350051(39329996, -), CAediting_1350052(39329997, -), CAediting_1350053(39330002, -), CAediting_1350054(39330016, -), CAediting_1350055(39330032, -), CAediting_1350056(39330057, -), CAediting_1350057(39330066, -), CAediting_1350058(39330462, -), CAediting_1350059(39330505, -), CAediting_1350060(39330542, -), CAediting_1350061(39330544, -), CAediting_1350062(39330569, -), CAediting_1350063(39330672, -), CAediting_1350064(39330699, -), CAediting_1350065(39330734, -), CAediting_1350066(39330793, -), CAediting_1350067(39330872, -), CAediting_1350068(39330895, -), CAediting_1350069(39330903, -), CAediting_1350070(39330957, -), CAediting_1350071(39331010, -), CAediting_1350072(39331017, -), CAediting_1350073(39331332, -), CAediting_1350074(39331662, -), CAediting_1350075(39331663, -), CAediting_1350076(39331675, -), CAediting_1350077(39331692, -), CAediting_1350078(39331761, -), CAediting_1350079(39331775, -), CAediting_1350080(39331925, -), CAediting_1350081(39331929, -), CAediting_1350082(39331955, -), CAediting_1350083(39331960, -), CAediting_1350084(39332039, -), CAediting_1350085(39332040, -), CAediting_1350086(39332045, -), CAediting_1350087(39332130, -), CAediting_1350088(39332136, -), CAediting_1350089(39332149, -), CAediting_1350090(39332167, -), CAediting_1350091(39332247, -), CAediting_1350092(39332418, -), CAediting_1350093(39332440, -), CAediting_1350094(39332441, -), CAediting_1350095(39332719, -), CAediting_1350096(39332724, -), CAediting_1350097(39332744, -), CAediting_1350098(39332756, -), CAediting_1350099(39332764, -), CAediting_1350100(39332774, -), CAediting_1350101(39332787, -), CAediting_1350102(39332796, -), CAediting_1350103(39332797, -), CAediting_1350104(39332822, -), CAediting_1350105(39332823, -), CAediting_1350106(39332826, -), CAediting_1350107(39332829, -), CAediting_1350108(39332836, -), CAediting_1350109(39332838, -), CAediting_1350110(39332877, -), CAediting_1350111(39332878, -), CAediting_1350112(39332891, -), CAediting_1350113(39332931, -), CAediting_1350114(39332932, -), CAediting_1350115(39333200, -), CAediting_1350116(39333201, -), CAediting_1350117(39333202, -), CAediting_1350118(39333258, -), CAediting_1350119(39333266, -), CAediting_1350120(39333277, -), CAediting_1350121(39333279, -), CAediting_1350122(39333282, -), CAediting_1350123(39333288, -), CAediting_1350124(39333297, -), CAediting_1350125(39333322, -), CAediting_1350126(39333324, -), CAediting_1350127(39333334, -), CAediting_1350128(39333346, -), CAediting_1350129(39333359, -), CAediting_1350130(39333360, -), CAediting_1350131(39333363, -), CAediting_1350132(39333364, -), CAediting_1350133(39333383, -), CAediting_1350134(39333399, -), CAediting_1350135(39333443, -), CAediting_1350136(39333480, -), CAediting_1350137(39333493, -), CAediting_1350138(39333494, -), CAediting_1350139(39333498, -), CAediting_1350140(39333517, -), CAediting_1350141(39333518, -), CAediting_1350142(39333527, -), CAediting_1350143(39333534, -), CAediting_1350144(39333536, -), CAediting_1350145(39333541, -), CAediting_1350146(39334082, -), CAediting_1350147(39334084, -), CAediting_1350148(39334089, -), CAediting_1350149(39334149, -), CAediting_1350150(39334155, -), CAediting_1350151(39334181, -), CAediting_1350152(39334184, -), CAediting_1350153(39334188, -), CAediting_1350154(39334200, -), CAediting_1350155(39334272, -), CAediting_1350156(39334350, -), CAediting_1350157(39334392, -), CAediting_1350158(39334422, -), CAediting_1350159(39334427, -), CAediting_1350160(39334432, -), CAediting_1350161(39334441, -), CAediting_1350162(39334445, -), CAediting_1350163(39334471, -), CAediting_1350164(39334495, -), CAediting_1350165(39334540, -), CAediting_1350166(39334891, -), CAediting_1350167(39334904, -), CAediting_1350168(39334922, -), CAediting_1350169(39334937, -), CAediting_1350170(39334946, -), CAediting_1350171(39334955, -), CAediting_1350172(39334961, -), CAediting_1350173(39334978, -), CAediting_1350174(39334987, -), CAediting_1350175(39335006, -), CAediting_1350176(39335014, -), CAediting_1350177(39335018, -), CAediting_1350178(39335021, -), CAediting_1350179(39335026, -), CAediting_1350180(39335027, -), CAediting_1350181(39335028, -), CAediting_1350182(39335029, -), CAediting_1350183(39335030, -), CAediting_1350184(39335033, -), CAediting_1350185(39335044, -), CAediting_1350186(39335045, -), CAediting_1350187(39335052, -), CAediting_1350188(39335054, -), CAediting_1350189(39335067, -), CAediting_1350190(39335070, -), CAediting_1350191(39335083, -), CAediting_1350192(39335097, -), CAediting_1350193(39335115, -), CAediting_1350194(39335123, -), CAediting_1350195(39335124, -), CAediting_1350196(39335142, -), CAediting_1350197(39337919, -), CAediting_1350198(39339010, -),

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RNA editing positional annotations for GMFG using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1350032chr19_39328644_-UTR3
CAediting_1350033chr19_39328649_-UTR3
CAediting_1350034chr19_39328661_-UTR3
CAediting_1350035chr19_39328694_-UTR3
CAediting_1350036chr19_39328722_-UTR3
CAediting_1350037chr19_39328739_-UTR3
CAediting_1350038chr19_39328757_-UTR3
CAediting_1350039chr19_39328766_-UTR3
CAediting_1350040chr19_39328791_-UTR3
CAediting_1350041chr19_39328792_-UTR3
CAediting_1350042chr19_39328795_-UTR3
CAediting_1350043chr19_39328816_-UTR3
CAediting_1350044chr19_39328878_-UTR3
CAediting_1350045chr19_39329906_-intronic
CAediting_1350046chr19_39329916_-intronic
CAediting_1350047chr19_39329922_-intronic
CAediting_1350048chr19_39329931_-intronic
CAediting_1350049chr19_39329941_-intronic
CAediting_1350050chr19_39329979_-intronic
CAediting_1350051chr19_39329996_-intronic
CAediting_1350052chr19_39329997_-intronic
CAediting_1350053chr19_39330002_-intronic
CAediting_1350054chr19_39330016_-intronic
CAediting_1350055chr19_39330032_-intronic
CAediting_1350056chr19_39330057_-intronic
CAediting_1350057chr19_39330066_-intronic
CAediting_1350058chr19_39330462_-intronic
CAediting_1350059chr19_39330505_-intronic
CAediting_1350060chr19_39330542_-intronic
CAediting_1350061chr19_39330544_-intronic
CAediting_1350062chr19_39330569_-intronic
CAediting_1350063chr19_39330672_-intronic
CAediting_1350064chr19_39330699_-intronic
CAediting_1350065chr19_39330734_-intronic
CAediting_1350066chr19_39330793_-intronic
CAediting_1350067chr19_39330872_-intronic
CAediting_1350068chr19_39330895_-intronic
CAediting_1350069chr19_39330903_-intronic
CAediting_1350070chr19_39330957_-intronic
CAediting_1350071chr19_39331010_-intronic
CAediting_1350072chr19_39331017_-intronic
CAediting_1350073chr19_39331332_-intronic
CAediting_1350074chr19_39331662_-intronic
CAediting_1350075chr19_39331663_-intronic
CAediting_1350076chr19_39331675_-intronic
CAediting_1350077chr19_39331692_-intronic
CAediting_1350078chr19_39331761_-intronic
CAediting_1350079chr19_39331775_-intronic
CAediting_1350080chr19_39331925_-intronic
CAediting_1350081chr19_39331929_-intronic
CAediting_1350082chr19_39331955_-intronic
CAediting_1350083chr19_39331960_-intronic
CAediting_1350084chr19_39332039_-intronic
CAediting_1350085chr19_39332040_-intronic
CAediting_1350086chr19_39332045_-intronic
CAediting_1350087chr19_39332130_-intronic
CAediting_1350088chr19_39332136_-intronic
CAediting_1350089chr19_39332149_-intronic
CAediting_1350090chr19_39332167_-intronic
CAediting_1350091chr19_39332247_-intronic
CAediting_1350092chr19_39332418_-intronic
CAediting_1350093chr19_39332440_-intronic
CAediting_1350094chr19_39332441_-intronic
CAediting_1350095chr19_39332719_-intronic
CAediting_1350096chr19_39332724_-intronic
CAediting_1350097chr19_39332744_-intronic
CAediting_1350098chr19_39332756_-intronic
CAediting_1350099chr19_39332764_-intronic
CAediting_1350100chr19_39332774_-intronic
CAediting_1350101chr19_39332787_-intronic
CAediting_1350102chr19_39332796_-intronic
CAediting_1350103chr19_39332797_-intronic
CAediting_1350104chr19_39332822_-intronic
CAediting_1350105chr19_39332823_-intronic
CAediting_1350106chr19_39332826_-intronic
CAediting_1350107chr19_39332829_-intronic
CAediting_1350108chr19_39332836_-intronic
CAediting_1350109chr19_39332838_-intronic
CAediting_1350110chr19_39332877_-intronic
CAediting_1350111chr19_39332878_-intronic
CAediting_1350112chr19_39332891_-intronic
CAediting_1350113chr19_39332931_-ncRNA_exonic
CAediting_1350114chr19_39332932_-ncRNA_exonic
CAediting_1350115chr19_39333200_-ncRNA_intronic
CAediting_1350116chr19_39333201_-ncRNA_intronic
CAediting_1350117chr19_39333202_-ncRNA_intronic
CAediting_1350118chr19_39333258_-ncRNA_intronic
CAediting_1350119chr19_39333266_-ncRNA_intronic
CAediting_1350120chr19_39333277_-ncRNA_intronic
CAediting_1350121chr19_39333279_-ncRNA_intronic
CAediting_1350122chr19_39333282_-ncRNA_intronic
CAediting_1350123chr19_39333288_-ncRNA_intronic
CAediting_1350124chr19_39333297_-ncRNA_intronic
CAediting_1350125chr19_39333322_-ncRNA_intronic
CAediting_1350126chr19_39333324_-ncRNA_intronic
CAediting_1350127chr19_39333334_-ncRNA_intronic
CAediting_1350128chr19_39333346_-ncRNA_intronic
CAediting_1350129chr19_39333359_-ncRNA_intronic
CAediting_1350130chr19_39333360_-ncRNA_intronic
CAediting_1350131chr19_39333363_-ncRNA_intronic
CAediting_1350132chr19_39333364_-ncRNA_intronic
CAediting_1350133chr19_39333383_-ncRNA_intronic
CAediting_1350134chr19_39333399_-ncRNA_intronic
CAediting_1350135chr19_39333443_-ncRNA_intronic
CAediting_1350136chr19_39333480_-ncRNA_intronic
CAediting_1350137chr19_39333493_-ncRNA_intronic
CAediting_1350138chr19_39333494_-ncRNA_intronic
CAediting_1350139chr19_39333498_-ncRNA_intronic
CAediting_1350140chr19_39333517_-ncRNA_intronic
CAediting_1350141chr19_39333518_-ncRNA_intronic
CAediting_1350142chr19_39333527_-ncRNA_intronic
CAediting_1350143chr19_39333534_-ncRNA_intronic
CAediting_1350144chr19_39333536_-ncRNA_intronic
CAediting_1350145chr19_39333541_-ncRNA_intronic
CAediting_1350146chr19_39334082_-ncRNA_intronic
CAediting_1350147chr19_39334084_-ncRNA_intronic
CAediting_1350148chr19_39334089_-ncRNA_intronic
CAediting_1350149chr19_39334149_-ncRNA_intronic
CAediting_1350150chr19_39334155_-ncRNA_intronic
CAediting_1350151chr19_39334181_-ncRNA_intronic
CAediting_1350152chr19_39334184_-ncRNA_intronic
CAediting_1350153chr19_39334188_-ncRNA_intronic
CAediting_1350154chr19_39334200_-ncRNA_intronic
CAediting_1350155chr19_39334272_-ncRNA_intronic
CAediting_1350156chr19_39334350_-ncRNA_intronic
CAediting_1350157chr19_39334392_-ncRNA_intronic
CAediting_1350158chr19_39334422_-ncRNA_intronic
CAediting_1350159chr19_39334427_-ncRNA_intronic
CAediting_1350160chr19_39334432_-ncRNA_intronic
CAediting_1350161chr19_39334441_-ncRNA_intronic
CAediting_1350162chr19_39334445_-ncRNA_intronic
CAediting_1350163chr19_39334471_-ncRNA_intronic
CAediting_1350164chr19_39334495_-ncRNA_intronic
CAediting_1350165chr19_39334540_-ncRNA_intronic
CAediting_1350166chr19_39334891_-ncRNA_intronic
CAediting_1350167chr19_39334904_-ncRNA_intronic
CAediting_1350168chr19_39334922_-ncRNA_intronic
CAediting_1350169chr19_39334937_-ncRNA_intronic
CAediting_1350170chr19_39334946_-ncRNA_intronic
CAediting_1350171chr19_39334955_-ncRNA_intronic
CAediting_1350172chr19_39334961_-ncRNA_intronic
CAediting_1350173chr19_39334978_-ncRNA_intronic
CAediting_1350174chr19_39334987_-ncRNA_intronic
CAediting_1350175chr19_39335006_-ncRNA_intronic
CAediting_1350176chr19_39335014_-ncRNA_intronic
CAediting_1350177chr19_39335018_-ncRNA_intronic
CAediting_1350178chr19_39335021_-ncRNA_intronic
CAediting_1350179chr19_39335026_-ncRNA_intronic
CAediting_1350180chr19_39335027_-ncRNA_intronic
CAediting_1350181chr19_39335028_-ncRNA_intronic
CAediting_1350182chr19_39335029_-ncRNA_intronic
CAediting_1350183chr19_39335030_-ncRNA_intronic
CAediting_1350184chr19_39335033_-ncRNA_intronic
CAediting_1350185chr19_39335044_-ncRNA_intronic
CAediting_1350186chr19_39335045_-ncRNA_intronic
CAediting_1350187chr19_39335052_-ncRNA_intronic
CAediting_1350188chr19_39335054_-ncRNA_intronic
CAediting_1350189chr19_39335067_-ncRNA_intronic
CAediting_1350190chr19_39335070_-ncRNA_intronic
CAediting_1350191chr19_39335083_-ncRNA_intronic
CAediting_1350192chr19_39335097_-ncRNA_intronic
CAediting_1350193chr19_39335115_-ncRNA_intronic
CAediting_1350194chr19_39335123_-ncRNA_intronic
CAediting_1350195chr19_39335124_-ncRNA_intronic
CAediting_1350196chr19_39335142_-ncRNA_intronic
CAediting_1350197chr19_39337919_-intronic
CAediting_1350198chr19_39339010_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1350032chr19_39328644_-SINEAluAluSz
CAediting_1350033chr19_39328649_-SINEAluAluSz
CAediting_1350034chr19_39328661_-SINEAluAluSz
CAediting_1350035chr19_39328694_-SINEAluAluSz
CAediting_1350036chr19_39328722_-SINEAluAluSz
CAediting_1350037chr19_39328739_-SINEAluAluSz
CAediting_1350038chr19_39328757_-SINEAluAluSz
CAediting_1350039chr19_39328766_-SINEAluAluSz
CAediting_1350040chr19_39328791_-SINEAluAluSz
CAediting_1350041chr19_39328792_-SINEAluAluSz
CAediting_1350042chr19_39328795_-SINEAluAluSz
CAediting_1350043chr19_39328816_-SINEAluAluSz
CAediting_1350044chr19_39328878_-SINEAluAluSz
CAediting_1350045chr19_39329906_-SINEAluAluSq2
CAediting_1350046chr19_39329916_-SINEAluAluSq2
CAediting_1350047chr19_39329922_-SINEAluAluSq2
CAediting_1350048chr19_39329931_-SINEAluAluSq2
CAediting_1350049chr19_39329941_-SINEAluAluSq2
CAediting_1350050chr19_39329979_-SINEAluAluSq2
CAediting_1350051chr19_39329996_-SINEAluAluSq2
CAediting_1350052chr19_39329997_-SINEAluAluSq2
CAediting_1350053chr19_39330002_-SINEAluAluSq2
CAediting_1350054chr19_39330016_-SINEAluAluSq2
CAediting_1350055chr19_39330032_-SINEAluAluSq2
CAediting_1350056chr19_39330057_-SINEAluAluSq2
CAediting_1350057chr19_39330066_-SINEAluAluSq2
CAediting_1350058chr19_39330462_-SINEAluAluJr
CAediting_1350059chr19_39330505_-SINEAluAluJr
CAediting_1350060chr19_39330542_-SINEAluAluJr
CAediting_1350061chr19_39330544_-SINEAluAluJr
CAediting_1350062chr19_39330569_-SINEAluAluJr
CAediting_1350063chr19_39330672_-SINEAluAluJb
CAediting_1350064chr19_39330699_-SINEAluAluJb
CAediting_1350065chr19_39330734_-SINEAluAluJb
CAediting_1350066chr19_39330793_-SINEAluAluJb
CAediting_1350067chr19_39330872_-SINEAluAluJb
CAediting_1350068chr19_39330895_-SINEAluAluJb
CAediting_1350069chr19_39330903_-SINEAluAluJr
CAediting_1350070chr19_39330957_-SINEAluAluJr
CAediting_1350071chr19_39331010_-SINEAluAluJr
CAediting_1350072chr19_39331017_-SINEAluAluJr
CAediting_1350073chr19_39331332_-DNAhAT-Tip100MER45C
CAediting_1350074chr19_39331662_-SINEAluAluJo
CAediting_1350075chr19_39331663_-SINEAluAluJo
CAediting_1350076chr19_39331675_-SINEAluAluJo
CAediting_1350077chr19_39331692_-SINEAluAluJo
CAediting_1350078chr19_39331761_-SINEAluAluJo
CAediting_1350079chr19_39331775_-SINEAluAluJo
CAediting_1350080chr19_39331925_-SINEAluAluJr
CAediting_1350081chr19_39331929_-SINEAluAluJr
CAediting_1350082chr19_39331955_-SINEAluAluJr
CAediting_1350083chr19_39331960_-SINEAluAluJr
CAediting_1350084chr19_39332039_-SINEAluAluJr
CAediting_1350085chr19_39332040_-SINEAluAluJr
CAediting_1350086chr19_39332045_-SINEAluAluJr
CAediting_1350087chr19_39332130_-SINEAluAluSx1
CAediting_1350088chr19_39332136_-SINEAluAluSx1
CAediting_1350089chr19_39332149_-SINEAluAluSx1
CAediting_1350090chr19_39332167_-SINEAluAluSx1
CAediting_1350091chr19_39332247_-SINEAluAluSx1
CAediting_1350092chr19_39332418_-SINEAluAluJr
CAediting_1350093chr19_39332440_-SINEAluAluJr
CAediting_1350094chr19_39332441_-SINEAluAluJr
CAediting_1350095chr19_39332719_-SINEAluAluSz
CAediting_1350096chr19_39332724_-SINEAluAluSz
CAediting_1350097chr19_39332744_-SINEAluAluSz
CAediting_1350098chr19_39332756_-SINEAluAluSz
CAediting_1350099chr19_39332764_-SINEAluAluSz
CAediting_1350100chr19_39332774_-SINEAluAluSz
CAediting_1350101chr19_39332787_-SINEAluAluSz
CAediting_1350102chr19_39332796_-SINEAluAluSz
CAediting_1350103chr19_39332797_-SINEAluAluSz
CAediting_1350104chr19_39332822_-SINEAluAluSz
CAediting_1350105chr19_39332823_-SINEAluAluSz
CAediting_1350106chr19_39332826_-SINEAluAluSz
CAediting_1350107chr19_39332829_-SINEAluAluSz
CAediting_1350108chr19_39332836_-SINEAluAluSz
CAediting_1350109chr19_39332838_-SINEAluAluSz
CAediting_1350110chr19_39332877_-SINEAluAluSz
CAediting_1350111chr19_39332878_-SINEAluAluSz
CAediting_1350112chr19_39332891_-SINEAluAluSz
CAediting_1350113chr19_39332931_-SINEAluAluSz
CAediting_1350114chr19_39332932_-SINEAluAluSz
CAediting_1350115chr19_39333200_-SINEAluAluSc8
CAediting_1350116chr19_39333201_-SINEAluAluSc8
CAediting_1350117chr19_39333202_-SINEAluAluSc8
CAediting_1350118chr19_39333258_-SINEAluAluSc8
CAediting_1350119chr19_39333266_-SINEAluAluSc8
CAediting_1350120chr19_39333277_-SINEAluAluSc8
CAediting_1350121chr19_39333279_-SINEAluAluSc8
CAediting_1350122chr19_39333282_-SINEAluAluSc8
CAediting_1350123chr19_39333288_-SINEAluAluSc8
CAediting_1350124chr19_39333297_-SINEAluAluSc8
CAediting_1350125chr19_39333322_-SINEAluAluSc8
CAediting_1350126chr19_39333324_-SINEAluAluSc8
CAediting_1350127chr19_39333334_-SINEAluAluSc8
CAediting_1350128chr19_39333346_-SINEAluAluSc8
CAediting_1350129chr19_39333359_-SINEAluAluSc8
CAediting_1350130chr19_39333360_-SINEAluAluSc8
CAediting_1350131chr19_39333363_-SINEAluAluSc8
CAediting_1350132chr19_39333364_-SINEAluAluSc8
CAediting_1350133chr19_39333383_-SINEAluAluSc8
CAediting_1350134chr19_39333399_-SINEAluAluSc8
CAediting_1350135chr19_39333443_-SINEAluAluSc8
CAediting_1350136chr19_39333480_-SINEAluAluSq2
CAediting_1350137chr19_39333493_-SINEAluAluSq2
CAediting_1350138chr19_39333494_-SINEAluAluSq2
CAediting_1350139chr19_39333498_-SINEAluAluSq2
CAediting_1350140chr19_39333517_-SINEAluAluSq2
CAediting_1350141chr19_39333518_-SINEAluAluSq2
CAediting_1350142chr19_39333527_-SINEAluAluSq2
CAediting_1350143chr19_39333534_-SINEAluAluSq2
CAediting_1350144chr19_39333536_-SINEAluAluSq2
CAediting_1350145chr19_39333541_-SINEAluAluSq2
CAediting_1350146chr19_39334082_-SINEAluAluY
CAediting_1350147chr19_39334084_-SINEAluAluY
CAediting_1350148chr19_39334089_-SINEAluAluY
CAediting_1350149chr19_39334149_-SINEAluAluY
CAediting_1350150chr19_39334155_-SINEAluAluY
CAediting_1350151chr19_39334181_-SINEAluAluY
CAediting_1350152chr19_39334184_-SINEAluAluY
CAediting_1350153chr19_39334188_-SINEAluAluY
CAediting_1350154chr19_39334200_-SINEAluAluY
CAediting_1350155chr19_39334272_-SINEAluAluY
CAediting_1350156chr19_39334350_-SINEAluFLAM_A
CAediting_1350157chr19_39334392_-SINEAluAluJb
CAediting_1350158chr19_39334422_-SINEAluAluJb
CAediting_1350159chr19_39334427_-SINEAluAluJb
CAediting_1350160chr19_39334432_-SINEAluAluJb
CAediting_1350161chr19_39334441_-SINEAluAluJb
CAediting_1350162chr19_39334445_-SINEAluAluJb
CAediting_1350163chr19_39334471_-SINEAluAluJb
CAediting_1350164chr19_39334495_-SINEAluAluJb
CAediting_1350165chr19_39334540_-SINEAluAluJb
CAediting_1350166chr19_39334891_-SINEAluAluSx1
CAediting_1350167chr19_39334904_-SINEAluAluSx1
CAediting_1350168chr19_39334922_-SINEAluAluSx1
CAediting_1350169chr19_39334937_-SINEAluAluSx1
CAediting_1350170chr19_39334946_-SINEAluAluSx1
CAediting_1350171chr19_39334955_-SINEAluAluSx1
CAediting_1350172chr19_39334961_-SINEAluAluSx1
CAediting_1350173chr19_39334978_-SINEAluAluSx1
CAediting_1350174chr19_39334987_-SINEAluAluSx1
CAediting_1350175chr19_39335006_-SINEAluAluSx1
CAediting_1350176chr19_39335014_-SINEAluAluSx1
CAediting_1350177chr19_39335018_-SINEAluAluSx1
CAediting_1350178chr19_39335021_-SINEAluAluSx1
CAediting_1350179chr19_39335026_-SINEAluAluSx1
CAediting_1350180chr19_39335027_-SINEAluAluSx1
CAediting_1350181chr19_39335028_-SINEAluAluSx1
CAediting_1350182chr19_39335029_-SINEAluAluSx1
CAediting_1350183chr19_39335030_-SINEAluAluSx1
CAediting_1350184chr19_39335033_-SINEAluAluSx1
CAediting_1350185chr19_39335044_-SINEAluAluSx1
CAediting_1350186chr19_39335045_-SINEAluAluSx1
CAediting_1350187chr19_39335052_-SINEAluAluSx1
CAediting_1350188chr19_39335054_-SINEAluAluSx1
CAediting_1350189chr19_39335067_-SINEAluAluSx1
CAediting_1350190chr19_39335070_-SINEAluAluSx1
CAediting_1350191chr19_39335083_-SINEAluAluSx1
CAediting_1350192chr19_39335097_-SINEAluAluSx1
CAediting_1350193chr19_39335115_-SINEAluAluSx1
CAediting_1350194chr19_39335123_-SINEAluAluSx1
CAediting_1350195chr19_39335124_-SINEAluAluSx1
CAediting_1350196chr19_39335142_-SINEAluAluSx1
CAediting_1350197chr19_39337919_-SINEAluAluJr
CAediting_1350198chr19_39339010_-SINEAluAluSg

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RNA A-to-I editing events in the alternative splicing sites for GMFG

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000130755.11.GMFG.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000130755.11.GMFG.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for GMFG

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for GMFG

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for GMFG

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1350033chr19_39328649_-ENSG00000130755.11ENST00000598034hsa-miR-6765-5p39328644393286507mer-m83932864339328667150.00-25.39
CAediting_1350038chr19_39328757_-ENSG00000130755.11ENST00000598034hsa-miR-4763-5p39328751393287588mer-1a3932875139328772149.00-26.14
CAediting_1350039chr19_39328766_-ENSG00000130755.11ENST00000598034hsa-miR-1255b-2-3p39328764393287707mer-m83932876339328784142.00-10.54
CAediting_1350039chr19_39328766_-ENSG00000130755.11ENST00000598034hsa-miR-3614-5p39328766393287727mer-m83932876539328788152.00-25.27
CAediting_1350040chr19_39328791_-ENSG00000130755.11ENST00000598034hsa-miR-146a-5p39328786393287927mer-m83932878539328809151.00-20.69
CAediting_1350040chr19_39328791_-ENSG00000130755.11ENST00000598034hsa-miR-146b-5p39328786393287927mer-m83932878539328808147.00-19.87
CAediting_1350040chr19_39328791_-ENSG00000130755.11ENST00000598034hsa-miR-7153-5p39328786393287927mer-m83932878539328807145.00-17.70
CAediting_1350036chr19_39328722_-ENSG00000130755.11ENST00000598034hsa-miR-480139328721393287266mer3932872039328742141.00-15.71
CAediting_1350044chr19_39328878_-ENSG00000130755.11ENST00000598034hsa-miR-211739328873393288797mer-m83932887239328892142.00-14.25
CAediting_1350044chr19_39328878_-ENSG00000130755.11ENST00000598034hsa-miR-520f-5p39328875393288828mer-1a3932887539328896148.00-11.05

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1350038chr19_39328757_-ENSG00000130755.11ENST00000598034hsa-miR-214-5p39328751393287588mer-1a3932875139328773149-22.35
CAediting_1350040chr19_39328791_-ENSG00000130755.11ENST00000598034hsa-miR-219b-3p39328788393287947mer-m83932878739328807153-18.56
CAediting_1350041chr19_39328792_-ENSG00000130755.11ENST00000598034hsa-miR-219b-3p39328788393287947mer-m83932878739328807153-18.56
CAediting_1350040chr19_39328791_-ENSG00000130755.11ENST00000598034hsa-miR-302f39328789393287957mer-m83932878839328804145-8.67
CAediting_1350041chr19_39328792_-ENSG00000130755.11ENST00000598034hsa-miR-302f39328789393287957mer-m83932878839328804145-8.67
CAediting_1350037chr19_39328739_-ENSG00000130755.11ENST00000598034hsa-miR-3934-5p39328735393287417mer-m83932873439328756151-24.98
CAediting_1350039chr19_39328766_-ENSG00000130755.11ENST00000598034hsa-miR-430139328760393287678mer-1a3932876039328779155-18.95
CAediting_1350032chr19_39328644_-ENSG00000130755.11ENST00000598034hsa-miR-447839328640393286467mer-m83932863939328655154-23.41
CAediting_1350035chr19_39328694_-ENSG00000130755.11ENST00000598034hsa-miR-451739328692393286976mer3932869139328715144-17.02
CAediting_1350032chr19_39328644_-ENSG00000130755.11ENST00000598034hsa-miR-485-5p39328639393286457mer-m83932863839328659149-16.76
CAediting_1350036chr19_39328722_-ENSG00000130755.11ENST00000598034hsa-miR-520d-5p39328722393287276mer3932872139328740147-14.32
CAediting_1350036chr19_39328722_-ENSG00000130755.11ENST00000598034hsa-miR-524-5p39328722393287276mer3932872139328742142-11.88
CAediting_1350035chr19_39328694_-ENSG00000130755.11ENST00000598034hsa-miR-5583-3p39328692393286987mer-m83932869139328712143-10.39
CAediting_1350035chr19_39328694_-ENSG00000130755.11ENST00000598034hsa-miR-5583-3p39328692393286987mer-m83932869139328712143-10.39
CAediting_1350033chr19_39328649_-ENSG00000130755.11ENST00000598034hsa-miR-613439328644393286518mer-1a3932864439328662154-20.3
CAediting_1350043chr19_39328816_-ENSG00000130755.11ENST00000598034hsa-miR-6516-5p39328815393288217mer-m83932881439328839151-17.79
CAediting_1350033chr19_39328649_-ENSG00000130755.11ENST00000598034hsa-miR-6748-5p39328648393286547mer-m83932864739328674151-24.09
CAediting_1350033chr19_39328649_-ENSG00000130755.11ENST00000598034hsa-miR-6769a-5p39328647393286537mer-m83932864639328664142-19.24
CAediting_1350033chr19_39328649_-ENSG00000130755.11ENST00000598034hsa-miR-6769b-5p39328647393286537mer-m83932864639328668152-25.12
CAediting_1350032chr19_39328644_-ENSG00000130755.11ENST00000598034hsa-miR-7160-5p39328642393286487mer-m83932864139328658148-19.34
CAediting_1350032chr19_39328644_-ENSG00000130755.11ENST00000598034hsa-miR-7162-3p39328643393286497mer-m83932864239328660150-18.37

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000601387hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000596583hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000595207hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000598034hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000600322hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000602185hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000253054hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000594700hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_688080chr9_63819626_+ENSG00000130755.11ENST00000595636hsa-miR-4477b39328435393284417mer-m83932843439328454150-12.72
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000601387hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000596583hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000595207hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_86358chr1_109598906_+ENSG00000130755.11ENST00000598034hsa-miR-197-5p39328649393286568mer-1a3932864939328677142-25.48
CAediting_77128chr1_85133844_+ENSG00000130755.11ENST00000598034hsa-miR-4423-3p39328603393286097mer-m83932860239328622140-15.31
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000598034hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000600322hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000602185hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000253054hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000594700hsa-miR-463539328434393284407mer-m83932843339328455152-19.12
CAediting_396018chr5_1062918_-ENSG00000130755.11ENST00000595636hsa-miR-463539328434393284407mer-m83932843339328455152-19.12

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000130755.11ENST00000598034hsa-miR-548aa39328901393289077mer-m83932890039328924145-10.97

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for GMFG

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for GMFG

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for GMFG

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for GMFG

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for GMFG

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GMFG

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
GMFGC0023893Liver Cirrhosis, Experimental1CTD_human