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Editing gene: TMEM59 (CAeditome ID:9528)

Gene summary for TMEM59

Gene summary

Gene information	Gene symbol	TMEM59
	Gene ID	9528
	Gene name	transmembrane protein 59
	Synonyms	C1orf8\|DCF1\|HSPC001\|PRO195\|UNQ169
	Cytomap	1p32.3
	Type of gene	protein-coding
	Description	transmembrane protein 59dendritic cell factor 1liver membrane-bound protein
	Modification date	20210518
	UniProtAcc	Q9BXS4
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TMEM59	GO:0010955	Transmembrane protein 59	20427278
TMEM59	GO:0090285	Transmembrane protein 59	20427278
TMEM59	GO:1903077	Transmembrane protein 59	20427278
TMEM59	GO:0000137	Transmembrane protein 59	20427278
TMEM59	GO:0000138	Transmembrane protein 59	20427278
TMEM59	GO:0005764	Transmembrane protein 59	23376921
TMEM59	GO:0005770	Transmembrane protein 59	23376921
TMEM59	GO:0005797	Transmembrane protein 59	20427278

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RNA A-to-I events for TMEM59

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000116209.10

RNA A-to-I editing events in Cancer.

CAediting_66475(54027503, -), CAediting_66476(54027506, -), CAediting_66477(54027524, -), CAediting_66478(54027525, -), CAediting_66479(54027526, -), CAediting_66480(54027534, -), CAediting_66481(54027547, -), CAediting_66482(54027548, -), CAediting_66483(54027552, -), CAediting_66484(54027564, -), CAediting_66485(54027577, -), CAediting_66486(54027586, -), CAediting_66487(54027599, -), CAediting_66488(54027601, -), CAediting_66489(54027602, -), CAediting_66490(54027603, -), CAediting_66491(54027606, -), CAediting_66492(54027612, -), CAediting_66493(54027647, -), CAediting_66494(54027657, -), CAediting_66495(54027660, -), CAediting_66496(54027669, -), CAediting_66497(54027682, -), CAediting_66498(54027686, -), CAediting_66499(54027687, -), CAediting_66500(54027693, -), CAediting_66501(54027714, -), CAediting_66502(54027724, -), CAediting_66503(54027727, -), CAediting_66504(54027738, -), CAediting_66505(54027745, -), CAediting_66506(54027749, -), CAediting_66507(54027757, -), CAediting_66508(54027763, -), CAediting_66509(54027767, -), CAediting_66510(54030192, -), CAediting_66511(54030197, -), CAediting_66512(54030200, -), CAediting_66513(54030210, -), CAediting_66514(54030488, -), CAediting_66515(54030489, -), CAediting_66516(54030492, -), CAediting_66517(54030494, -), CAediting_66518(54030496, -), CAediting_66519(54030505, -), CAediting_66520(54030509, -), CAediting_66521(54030511, -), CAediting_66522(54030517, -), CAediting_66523(54030520, -), CAediting_66524(54030525, -), CAediting_66525(54030530, -), CAediting_66526(54030536, -), CAediting_66527(54030539, -), CAediting_66528(54030544, -), CAediting_66529(54030557, -), CAediting_66530(54030560, -), CAediting_66531(54030565, -), CAediting_66532(54030566, -), CAediting_66533(54030574, -), CAediting_66534(54030973, -), CAediting_66535(54030993, -), CAediting_66536(54030995, -), CAediting_66537(54031007, -), CAediting_66538(54031008, -), CAediting_66539(54031009, -), CAediting_66540(54031018, -), CAediting_66541(54031022, -), CAediting_66542(54031026, -), CAediting_66543(54031035, -), CAediting_66544(54031040, -), CAediting_66545(54031047, -), CAediting_66546(54031048, -), CAediting_66547(54031060, -), CAediting_66548(54031069, -), CAediting_66549(54031072, -), CAediting_66550(54031082, -), CAediting_66551(54031084, -), CAediting_66552(54031086, -), CAediting_66553(54031089, -), CAediting_66554(54031103, -), CAediting_66555(54031123, -), CAediting_66556(54031127, -), CAediting_66557(54031151, -), CAediting_66558(54031168, -), CAediting_66559(54032955, -), CAediting_66560(54032956, -), CAediting_66561(54032958, -), CAediting_66562(54032964, -), CAediting_66563(54032973, -), CAediting_66564(54032986, -), CAediting_66565(54032988, -), CAediting_66566(54032994, -), CAediting_66567(54032998, -), CAediting_66568(54033020, -), CAediting_66569(54033025, -), CAediting_66570(54033030, -), CAediting_66571(54033033, -), CAediting_66572(54033043, -), CAediting_66573(54033049, -), CAediting_66574(54033052, -), CAediting_66575(54033056, -), CAediting_66576(54033066, -), CAediting_66577(54033095, -), CAediting_66578(54033096, -), CAediting_66579(54033097, -), CAediting_66580(54033102, -), CAediting_66581(54033108, -), CAediting_66582(54033129, -), CAediting_66583(54033131, -), CAediting_66584(54033156, -), CAediting_66585(54033160, -), CAediting_66586(54033169, -), CAediting_66587(54033177, -), CAediting_66588(54033179, -), CAediting_66589(54033188, -), CAediting_66590(54033193, -), CAediting_66591(54033198, -), CAediting_66592(54033204, -), CAediting_66593(54033211, -), CAediting_66594(54033212, -), CAediting_66595(54033217, -), CAediting_66596(54033227, -), CAediting_66597(54033228, -), CAediting_66598(54033237, -), CAediting_66599(54033239, -), CAediting_66600(54033272, -), CAediting_66601(54033338, -), CAediting_66602(54033356, -), CAediting_66603(54033357, -), CAediting_66604(54033383, -), CAediting_66605(54033384, -), CAediting_66606(54033389, -), CAediting_66607(54033413, -), CAediting_66608(54033478, -), CAediting_66609(54033480, -), CAediting_66610(54033484, -), CAediting_66611(54033490, -), CAediting_66612(54033502, -), CAediting_66613(54033515, -), CAediting_66614(54033519, -), CAediting_66615(54033520, -), CAediting_66616(54033550, -), CAediting_66617(54033576, -), CAediting_66618(54033588, -), CAediting_66619(54033594, -), CAediting_66620(54033596, -), CAediting_66621(54033994, -), CAediting_66622(54034023, -), CAediting_66623(54034035, -), CAediting_66624(54034088, -), CAediting_66625(54034642, -), CAediting_66626(54034649, -), CAediting_66627(54034650, -), CAediting_66628(54034652, -), CAediting_66629(54034674, -), CAediting_66630(54034687, -), CAediting_66631(54035621, -), CAediting_66632(54035622, -), CAediting_66633(54035626, -), CAediting_66634(54035627, -), CAediting_66635(54035643, -), CAediting_66636(54035660, -), CAediting_66637(54035705, -), CAediting_66638(54035710, -), CAediting_66639(54035840, -), CAediting_66640(54035869, -), CAediting_66641(54036005, -), CAediting_66642(54036054, -), CAediting_66643(54036092, -), CAediting_66644(54036099, -), CAediting_66645(54036115, -), CAediting_66646(54036118, -), CAediting_66647(54036159, -), CAediting_66648(54036218, -), CAediting_66649(54036219, -), CAediting_66650(54036251, -), CAediting_66651(54036273, -), CAediting_66652(54038990, -), CAediting_66653(54044637, -), CAediting_66654(54047716, -), CAediting_66655(54047717, -), CAediting_66656(54047726, -), CAediting_66657(54047774, -), CAediting_66658(54047776, -), CAediting_66659(54047829, -), CAediting_66660(54047848, -), CAediting_66661(54047853, -), CAediting_66662(54047868, -), CAediting_66663(54047884, -), CAediting_66664(54047885, -), CAediting_66665(54047911, -), CAediting_66666(54047916, -), CAediting_66667(54047932, -), CAediting_66668(54047941, -), CAediting_66669(54047954, -), CAediting_66670(54049722, -), CAediting_66671(54049734, -), CAediting_66672(54049735, -), CAediting_66673(54050194, -), CAediting_66674(54050324, -), CAediting_66675(54050341, -), CAediting_66676(54050342, -), CAediting_66677(54050390, -), CAediting_66678(54050395, -), CAediting_66679(54050396, -), CAediting_66680(54050404, -), CAediting_66681(54050655, -), CAediting_66682(54050656, -), CAediting_66683(54050680, -), CAediting_66684(54050763, -), CAediting_66685(54050781, -), CAediting_66686(54051009, -), CAediting_66687(54051087, -), CAediting_66688(54051122, -), CAediting_66689(54051127, -), CAediting_66690(54051128, -), CAediting_66691(54051136, -), CAediting_66692(54051143, -),

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RNA editing positional annotations for TMEM59 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_66475	chr1_54027503_-	UTR3
CAediting_66476	chr1_54027506_-	UTR3
CAediting_66477	chr1_54027524_-	UTR3
CAediting_66478	chr1_54027525_-	UTR3
CAediting_66479	chr1_54027526_-	UTR3
CAediting_66480	chr1_54027534_-	UTR3
CAediting_66481	chr1_54027547_-	UTR3
CAediting_66482	chr1_54027548_-	UTR3
CAediting_66483	chr1_54027552_-	UTR3
CAediting_66484	chr1_54027564_-	UTR3
CAediting_66485	chr1_54027577_-	UTR3
CAediting_66486	chr1_54027586_-	UTR3
CAediting_66487	chr1_54027599_-	UTR3
CAediting_66488	chr1_54027601_-	UTR3
CAediting_66489	chr1_54027602_-	UTR3
CAediting_66490	chr1_54027603_-	UTR3
CAediting_66491	chr1_54027606_-	UTR3
CAediting_66492	chr1_54027612_-	UTR3
CAediting_66493	chr1_54027647_-	UTR3
CAediting_66494	chr1_54027657_-	UTR3
CAediting_66495	chr1_54027660_-	UTR3
CAediting_66496	chr1_54027669_-	UTR3
CAediting_66497	chr1_54027682_-	UTR3
CAediting_66498	chr1_54027686_-	UTR3
CAediting_66499	chr1_54027687_-	UTR3
CAediting_66500	chr1_54027693_-	UTR3
CAediting_66501	chr1_54027714_-	UTR3
CAediting_66502	chr1_54027724_-	UTR3
CAediting_66503	chr1_54027727_-	UTR3
CAediting_66504	chr1_54027738_-	UTR3
CAediting_66505	chr1_54027745_-	UTR3
CAediting_66506	chr1_54027749_-	UTR3
CAediting_66507	chr1_54027757_-	UTR3
CAediting_66508	chr1_54027763_-	UTR3
CAediting_66509	chr1_54027767_-	UTR3
CAediting_66510	chr1_54030192_-	UTR3
CAediting_66511	chr1_54030197_-	UTR3
CAediting_66512	chr1_54030200_-	UTR3
CAediting_66513	chr1_54030210_-	UTR3
CAediting_66514	chr1_54030488_-	UTR3
CAediting_66515	chr1_54030489_-	UTR3
CAediting_66516	chr1_54030492_-	UTR3
CAediting_66517	chr1_54030494_-	UTR3
CAediting_66518	chr1_54030496_-	UTR3
CAediting_66519	chr1_54030505_-	UTR3
CAediting_66520	chr1_54030509_-	UTR3
CAediting_66521	chr1_54030511_-	UTR3
CAediting_66522	chr1_54030517_-	UTR3
CAediting_66523	chr1_54030520_-	UTR3
CAediting_66524	chr1_54030525_-	UTR3
CAediting_66525	chr1_54030530_-	UTR3
CAediting_66526	chr1_54030536_-	UTR3
CAediting_66527	chr1_54030539_-	UTR3
CAediting_66528	chr1_54030544_-	UTR3
CAediting_66529	chr1_54030557_-	UTR3
CAediting_66530	chr1_54030560_-	UTR3
CAediting_66531	chr1_54030565_-	UTR3
CAediting_66532	chr1_54030566_-	UTR3
CAediting_66533	chr1_54030574_-	UTR3
CAediting_66534	chr1_54030973_-	UTR3
CAediting_66535	chr1_54030993_-	UTR3
CAediting_66536	chr1_54030995_-	UTR3
CAediting_66537	chr1_54031007_-	UTR3
CAediting_66538	chr1_54031008_-	UTR3
CAediting_66539	chr1_54031009_-	UTR3
CAediting_66540	chr1_54031018_-	UTR3
CAediting_66541	chr1_54031022_-	UTR3
CAediting_66542	chr1_54031026_-	UTR3
CAediting_66543	chr1_54031035_-	UTR3
CAediting_66544	chr1_54031040_-	UTR3
CAediting_66545	chr1_54031047_-	UTR3
CAediting_66546	chr1_54031048_-	UTR3
CAediting_66547	chr1_54031060_-	UTR3
CAediting_66548	chr1_54031069_-	UTR3
CAediting_66549	chr1_54031072_-	UTR3
CAediting_66550	chr1_54031082_-	UTR3
CAediting_66551	chr1_54031084_-	UTR3
CAediting_66552	chr1_54031086_-	UTR3
CAediting_66553	chr1_54031089_-	UTR3
CAediting_66554	chr1_54031103_-	UTR3
CAediting_66555	chr1_54031123_-	UTR3
CAediting_66556	chr1_54031127_-	UTR3
CAediting_66557	chr1_54031151_-	UTR3
CAediting_66558	chr1_54031168_-	UTR3
CAediting_66559	chr1_54032955_-	ncRNA_intronic
CAediting_66560	chr1_54032956_-	ncRNA_intronic
CAediting_66561	chr1_54032958_-	ncRNA_intronic
CAediting_66562	chr1_54032964_-	ncRNA_intronic
CAediting_66563	chr1_54032973_-	ncRNA_intronic
CAediting_66564	chr1_54032986_-	ncRNA_intronic
CAediting_66565	chr1_54032988_-	ncRNA_intronic
CAediting_66566	chr1_54032994_-	ncRNA_intronic
CAediting_66567	chr1_54032998_-	ncRNA_intronic
CAediting_66568	chr1_54033020_-	ncRNA_intronic
CAediting_66569	chr1_54033025_-	ncRNA_intronic
CAediting_66570	chr1_54033030_-	ncRNA_intronic
CAediting_66571	chr1_54033033_-	ncRNA_intronic
CAediting_66572	chr1_54033043_-	ncRNA_intronic
CAediting_66573	chr1_54033049_-	ncRNA_intronic
CAediting_66574	chr1_54033052_-	ncRNA_intronic
CAediting_66575	chr1_54033056_-	ncRNA_intronic
CAediting_66576	chr1_54033066_-	ncRNA_intronic
CAediting_66577	chr1_54033095_-	ncRNA_intronic
CAediting_66578	chr1_54033096_-	ncRNA_intronic
CAediting_66579	chr1_54033097_-	ncRNA_intronic
CAediting_66580	chr1_54033102_-	ncRNA_intronic
CAediting_66581	chr1_54033108_-	ncRNA_intronic
CAediting_66582	chr1_54033129_-	ncRNA_exonic
CAediting_66583	chr1_54033131_-	ncRNA_exonic
CAediting_66584	chr1_54033156_-	ncRNA_exonic
CAediting_66585	chr1_54033160_-	ncRNA_exonic
CAediting_66586	chr1_54033169_-	ncRNA_exonic
CAediting_66587	chr1_54033177_-	ncRNA_exonic
CAediting_66588	chr1_54033179_-	ncRNA_exonic
CAediting_66589	chr1_54033188_-	ncRNA_exonic
CAediting_66590	chr1_54033193_-	ncRNA_exonic
CAediting_66591	chr1_54033198_-	ncRNA_exonic
CAediting_66592	chr1_54033204_-	ncRNA_exonic
CAediting_66593	chr1_54033211_-	ncRNA_exonic
CAediting_66594	chr1_54033212_-	ncRNA_exonic
CAediting_66595	chr1_54033217_-	ncRNA_exonic
CAediting_66596	chr1_54033227_-	ncRNA_exonic
CAediting_66597	chr1_54033228_-	ncRNA_exonic
CAediting_66598	chr1_54033237_-	ncRNA_exonic
CAediting_66599	chr1_54033239_-	ncRNA_exonic
CAediting_66600	chr1_54033272_-	ncRNA_exonic
CAediting_66601	chr1_54033338_-	ncRNA_exonic
CAediting_66602	chr1_54033356_-	ncRNA_exonic
CAediting_66603	chr1_54033357_-	ncRNA_exonic
CAediting_66604	chr1_54033383_-	ncRNA_exonic
CAediting_66605	chr1_54033384_-	ncRNA_exonic
CAediting_66606	chr1_54033389_-	ncRNA_exonic
CAediting_66607	chr1_54033413_-	ncRNA_exonic
CAediting_66608	chr1_54033478_-	ncRNA_exonic
CAediting_66609	chr1_54033480_-	ncRNA_exonic
CAediting_66610	chr1_54033484_-	ncRNA_exonic
CAediting_66611	chr1_54033490_-	ncRNA_exonic
CAediting_66612	chr1_54033502_-	ncRNA_exonic
CAediting_66613	chr1_54033515_-	ncRNA_exonic
CAediting_66614	chr1_54033519_-	ncRNA_exonic
CAediting_66615	chr1_54033520_-	ncRNA_exonic
CAediting_66616	chr1_54033550_-	ncRNA_exonic
CAediting_66617	chr1_54033576_-	ncRNA_exonic
CAediting_66618	chr1_54033588_-	ncRNA_exonic
CAediting_66619	chr1_54033594_-	ncRNA_exonic
CAediting_66620	chr1_54033596_-	ncRNA_exonic
CAediting_66621	chr1_54033994_-	ncRNA_exonic
CAediting_66622	chr1_54034023_-	ncRNA_exonic
CAediting_66623	chr1_54034035_-	ncRNA_exonic
CAediting_66624	chr1_54034088_-	ncRNA_exonic
CAediting_66625	chr1_54034642_-	ncRNA_exonic
CAediting_66626	chr1_54034649_-	ncRNA_exonic
CAediting_66627	chr1_54034650_-	ncRNA_exonic
CAediting_66628	chr1_54034652_-	ncRNA_exonic
CAediting_66629	chr1_54034674_-	ncRNA_exonic
CAediting_66630	chr1_54034687_-	ncRNA_exonic
CAediting_66631	chr1_54035621_-	ncRNA_intronic
CAediting_66632	chr1_54035622_-	ncRNA_intronic
CAediting_66633	chr1_54035626_-	ncRNA_intronic
CAediting_66634	chr1_54035627_-	ncRNA_intronic
CAediting_66635	chr1_54035643_-	ncRNA_intronic
CAediting_66636	chr1_54035660_-	ncRNA_intronic
CAediting_66637	chr1_54035705_-	ncRNA_intronic
CAediting_66638	chr1_54035710_-	ncRNA_intronic
CAediting_66639	chr1_54035840_-	ncRNA_intronic
CAediting_66640	chr1_54035869_-	ncRNA_intronic
CAediting_66641	chr1_54036005_-	ncRNA_intronic
CAediting_66642	chr1_54036054_-	ncRNA_intronic
CAediting_66643	chr1_54036092_-	ncRNA_intronic
CAediting_66644	chr1_54036099_-	ncRNA_intronic
CAediting_66645	chr1_54036115_-	ncRNA_intronic
CAediting_66646	chr1_54036118_-	ncRNA_intronic
CAediting_66647	chr1_54036159_-	ncRNA_intronic
CAediting_66648	chr1_54036218_-	ncRNA_intronic
CAediting_66649	chr1_54036219_-	ncRNA_intronic
CAediting_66650	chr1_54036251_-	ncRNA_intronic
CAediting_66651	chr1_54036273_-	ncRNA_intronic
CAediting_66652	chr1_54038990_-	intronic
CAediting_66653	chr1_54044637_-	UTR5
CAediting_66654	chr1_54047716_-	UTR5
CAediting_66655	chr1_54047717_-	UTR5
CAediting_66656	chr1_54047726_-	UTR5
CAediting_66657	chr1_54047774_-	UTR5
CAediting_66658	chr1_54047776_-	UTR5
CAediting_66659	chr1_54047829_-	UTR5
CAediting_66660	chr1_54047848_-	UTR5
CAediting_66661	chr1_54047853_-	UTR5
CAediting_66662	chr1_54047868_-	UTR5
CAediting_66663	chr1_54047884_-	UTR5
CAediting_66664	chr1_54047885_-	UTR5
CAediting_66665	chr1_54047911_-	UTR5
CAediting_66666	chr1_54047916_-	UTR5
CAediting_66667	chr1_54047932_-	UTR5
CAediting_66668	chr1_54047941_-	UTR5
CAediting_66669	chr1_54047954_-	UTR5
CAediting_66670	chr1_54049722_-	intronic
CAediting_66671	chr1_54049734_-	intronic
CAediting_66672	chr1_54049735_-	intronic
CAediting_66673	chr1_54050194_-	intronic
CAediting_66674	chr1_54050324_-	intronic
CAediting_66675	chr1_54050341_-	intronic
CAediting_66676	chr1_54050342_-	intronic
CAediting_66677	chr1_54050390_-	intronic
CAediting_66678	chr1_54050395_-	intronic
CAediting_66679	chr1_54050396_-	intronic
CAediting_66680	chr1_54050404_-	intronic
CAediting_66681	chr1_54050655_-	intronic
CAediting_66682	chr1_54050656_-	intronic
CAediting_66683	chr1_54050680_-	intronic
CAediting_66684	chr1_54050763_-	intronic
CAediting_66685	chr1_54050781_-	intronic
CAediting_66686	chr1_54051009_-	intronic
CAediting_66687	chr1_54051087_-	intronic
CAediting_66688	chr1_54051122_-	intronic
CAediting_66689	chr1_54051127_-	intronic
CAediting_66690	chr1_54051128_-	intronic
CAediting_66691	chr1_54051136_-	intronic
CAediting_66692	chr1_54051143_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_66475	chr1_54027503_-	SINE	Alu	AluSz6
CAediting_66476	chr1_54027506_-	SINE	Alu	AluSz6
CAediting_66477	chr1_54027524_-	SINE	Alu	AluSz6
CAediting_66478	chr1_54027525_-	SINE	Alu	AluSz6
CAediting_66479	chr1_54027526_-	SINE	Alu	AluSz6
CAediting_66480	chr1_54027534_-	SINE	Alu	AluSz6
CAediting_66481	chr1_54027547_-	SINE	Alu	AluSz6
CAediting_66482	chr1_54027548_-	SINE	Alu	AluSz6
CAediting_66483	chr1_54027552_-	SINE	Alu	AluSz6
CAediting_66484	chr1_54027564_-	SINE	Alu	AluSz6
CAediting_66485	chr1_54027577_-	SINE	Alu	AluSz6
CAediting_66486	chr1_54027586_-	SINE	Alu	AluSz6
CAediting_66487	chr1_54027599_-	SINE	Alu	AluSz6
CAediting_66488	chr1_54027601_-	SINE	Alu	AluSz6
CAediting_66489	chr1_54027602_-	SINE	Alu	AluSz6
CAediting_66490	chr1_54027603_-	SINE	Alu	AluSz6
CAediting_66491	chr1_54027606_-	SINE	Alu	AluSz6
CAediting_66492	chr1_54027612_-	SINE	Alu	AluSz6
CAediting_66493	chr1_54027647_-	SINE	Alu	AluSz6
CAediting_66494	chr1_54027657_-	SINE	Alu	AluSz6
CAediting_66495	chr1_54027660_-	SINE	Alu	AluSz6
CAediting_66496	chr1_54027669_-	SINE	Alu	AluSz6
CAediting_66497	chr1_54027682_-	SINE	Alu	AluSz6
CAediting_66498	chr1_54027686_-	SINE	Alu	AluSz6
CAediting_66499	chr1_54027687_-	SINE	Alu	AluSz6
CAediting_66500	chr1_54027693_-	SINE	Alu	AluSz6
CAediting_66501	chr1_54027714_-	SINE	Alu	AluSz6
CAediting_66502	chr1_54027724_-	SINE	Alu	AluSz6
CAediting_66503	chr1_54027727_-	SINE	Alu	AluSz6
CAediting_66504	chr1_54027738_-	SINE	Alu	AluSz6
CAediting_66505	chr1_54027745_-	SINE	Alu	AluSz6
CAediting_66506	chr1_54027749_-	SINE	Alu	AluSz6
CAediting_66507	chr1_54027757_-	SINE	Alu	AluSz6
CAediting_66508	chr1_54027763_-	SINE	Alu	AluSz6
CAediting_66509	chr1_54027767_-	SINE	Alu	AluSz6
CAediting_66510	chr1_54030192_-	SINE	Alu	AluJr
CAediting_66511	chr1_54030197_-	SINE	Alu	AluJr
CAediting_66512	chr1_54030200_-	SINE	Alu	AluJr
CAediting_66513	chr1_54030210_-	SINE	Alu	AluJr
CAediting_66514	chr1_54030488_-	SINE	Alu	AluJr
CAediting_66515	chr1_54030489_-	SINE	Alu	AluJr
CAediting_66516	chr1_54030492_-	SINE	Alu	AluJr
CAediting_66517	chr1_54030494_-	SINE	Alu	AluJr
CAediting_66518	chr1_54030496_-	SINE	Alu	AluJr
CAediting_66519	chr1_54030505_-	SINE	Alu	AluJr
CAediting_66520	chr1_54030509_-	SINE	Alu	AluJr
CAediting_66521	chr1_54030511_-	SINE	Alu	AluJr
CAediting_66522	chr1_54030517_-	SINE	Alu	AluJr
CAediting_66523	chr1_54030520_-	SINE	Alu	AluJr
CAediting_66524	chr1_54030525_-	SINE	Alu	AluJr
CAediting_66525	chr1_54030530_-	SINE	Alu	AluJr
CAediting_66526	chr1_54030536_-	SINE	Alu	AluJr
CAediting_66527	chr1_54030539_-	SINE	Alu	AluJr
CAediting_66528	chr1_54030544_-	SINE	Alu	AluJr
CAediting_66529	chr1_54030557_-	SINE	Alu	AluJr
CAediting_66530	chr1_54030560_-	SINE	Alu	AluJr
CAediting_66531	chr1_54030565_-	SINE	Alu	AluJr
CAediting_66532	chr1_54030566_-	SINE	Alu	AluJr
CAediting_66533	chr1_54030574_-	SINE	Alu	AluJr
CAediting_66534	chr1_54030973_-	SINE	Alu	AluSq2
CAediting_66535	chr1_54030993_-	SINE	Alu	AluSq2
CAediting_66536	chr1_54030995_-	SINE	Alu	AluSq2
CAediting_66537	chr1_54031007_-	SINE	Alu	AluSq2
CAediting_66538	chr1_54031008_-	SINE	Alu	AluSq2
CAediting_66539	chr1_54031009_-	SINE	Alu	AluSq2
CAediting_66540	chr1_54031018_-	SINE	Alu	AluSq2
CAediting_66541	chr1_54031022_-	SINE	Alu	AluSq2
CAediting_66542	chr1_54031026_-	SINE	Alu	AluSq2
CAediting_66543	chr1_54031035_-	SINE	Alu	AluSq2
CAediting_66544	chr1_54031040_-	SINE	Alu	AluSq2
CAediting_66545	chr1_54031047_-	SINE	Alu	AluSq2
CAediting_66546	chr1_54031048_-	SINE	Alu	AluSq2
CAediting_66547	chr1_54031060_-	SINE	Alu	AluSq2
CAediting_66548	chr1_54031069_-	SINE	Alu	AluSq2
CAediting_66549	chr1_54031072_-	SINE	Alu	AluSq2
CAediting_66550	chr1_54031082_-	SINE	Alu	AluSq2
CAediting_66551	chr1_54031084_-	SINE	Alu	AluSq2
CAediting_66552	chr1_54031086_-	SINE	Alu	AluSq2
CAediting_66553	chr1_54031089_-	SINE	Alu	AluSq2
CAediting_66554	chr1_54031103_-	SINE	Alu	AluSq2
CAediting_66555	chr1_54031123_-	SINE	Alu	AluSq2
CAediting_66556	chr1_54031127_-	SINE	Alu	AluSq2
CAediting_66557	chr1_54031151_-	SINE	Alu	AluSq2
CAediting_66558	chr1_54031168_-	SINE	Alu	AluSq2
CAediting_66559	chr1_54032955_-	SINE	Alu	AluJr4
CAediting_66560	chr1_54032956_-	SINE	Alu	AluJr4
CAediting_66561	chr1_54032958_-	SINE	Alu	AluJr4
CAediting_66562	chr1_54032964_-	SINE	Alu	AluJr4
CAediting_66563	chr1_54032973_-	SINE	Alu	AluJr4
CAediting_66564	chr1_54032986_-	SINE	Alu	AluJr4
CAediting_66565	chr1_54032988_-	SINE	Alu	AluJr4
CAediting_66566	chr1_54032994_-	SINE	Alu	AluJr4
CAediting_66567	chr1_54032998_-	SINE	Alu	AluJr4
CAediting_66568	chr1_54033020_-	SINE	Alu	AluJr4
CAediting_66569	chr1_54033025_-	SINE	Alu	AluJr4
CAediting_66570	chr1_54033030_-	SINE	Alu	AluJr4
CAediting_66571	chr1_54033033_-	SINE	Alu	AluJr4
CAediting_66572	chr1_54033043_-	SINE	Alu	AluJr4
CAediting_66573	chr1_54033049_-	SINE	Alu	AluJr4
CAediting_66574	chr1_54033052_-	SINE	Alu	AluJr4
CAediting_66575	chr1_54033056_-	SINE	Alu	AluJr4
CAediting_66576	chr1_54033066_-	SINE	Alu	AluJr4
CAediting_66577	chr1_54033095_-	SINE	Alu	AluJr4
CAediting_66578	chr1_54033096_-	SINE	Alu	AluJr4
CAediting_66579	chr1_54033097_-	Simple_repeat	Simple_repeat	(TTTC)n
CAediting_66580	chr1_54033102_-	Simple_repeat	Simple_repeat	(TTTC)n
CAediting_66581	chr1_54033108_-	Simple_repeat	Simple_repeat	(TTTC)n
CAediting_66582	chr1_54033129_-	Simple_repeat	Simple_repeat	(TTTC)n
CAediting_66583	chr1_54033131_-	Simple_repeat	Simple_repeat	(TTTC)n
CAediting_66584	chr1_54033156_-	SINE	Alu	AluJr4
CAediting_66585	chr1_54033160_-	SINE	Alu	AluJr4
CAediting_66586	chr1_54033169_-	SINE	Alu	AluJr4
CAediting_66587	chr1_54033177_-	SINE	Alu	AluJr4
CAediting_66588	chr1_54033179_-	SINE	Alu	AluJr4
CAediting_66589	chr1_54033188_-	SINE	Alu	AluJr4
CAediting_66590	chr1_54033193_-	SINE	Alu	AluJr4
CAediting_66591	chr1_54033198_-	SINE	Alu	AluJr4
CAediting_66592	chr1_54033204_-	SINE	Alu	AluJr4
CAediting_66593	chr1_54033211_-	SINE	Alu	AluJr4
CAediting_66594	chr1_54033212_-	SINE	Alu	AluJr4
CAediting_66595	chr1_54033217_-	SINE	Alu	AluJr4
CAediting_66596	chr1_54033227_-	SINE	Alu	AluJr4
CAediting_66597	chr1_54033228_-	SINE	Alu	AluJr4
CAediting_66598	chr1_54033237_-	SINE	Alu	AluJr4
CAediting_66599	chr1_54033239_-	SINE	Alu	AluJr4
CAediting_66601	chr1_54033338_-	SINE	Alu	AluSz
CAediting_66602	chr1_54033356_-	SINE	Alu	AluSz
CAediting_66603	chr1_54033357_-	SINE	Alu	AluSz
CAediting_66604	chr1_54033383_-	SINE	Alu	AluSz
CAediting_66605	chr1_54033384_-	SINE	Alu	AluSz
CAediting_66606	chr1_54033389_-	SINE	Alu	AluSz
CAediting_66607	chr1_54033413_-	SINE	Alu	AluSz
CAediting_66608	chr1_54033478_-	SINE	Alu	AluSz
CAediting_66609	chr1_54033480_-	SINE	Alu	AluSz
CAediting_66610	chr1_54033484_-	SINE	Alu	AluSz
CAediting_66611	chr1_54033490_-	SINE	Alu	AluSz
CAediting_66612	chr1_54033502_-	SINE	Alu	AluSz
CAediting_66613	chr1_54033515_-	SINE	Alu	AluSz
CAediting_66614	chr1_54033519_-	SINE	Alu	AluSz
CAediting_66615	chr1_54033520_-	SINE	Alu	AluSz
CAediting_66616	chr1_54033550_-	SINE	Alu	AluSz
CAediting_66617	chr1_54033576_-	SINE	Alu	AluSz
CAediting_66618	chr1_54033588_-	SINE	Alu	AluSz
CAediting_66619	chr1_54033594_-	SINE	Alu	AluSz
CAediting_66620	chr1_54033596_-	SINE	Alu	AluSz
CAediting_66621	chr1_54033994_-	SINE	Alu	AluSx
CAediting_66622	chr1_54034023_-	SINE	Alu	AluSx
CAediting_66623	chr1_54034035_-	SINE	Alu	AluSx
CAediting_66624	chr1_54034088_-	SINE	Alu	AluSx
CAediting_66625	chr1_54034642_-	SINE	Alu	AluSz
CAediting_66626	chr1_54034649_-	SINE	Alu	AluSz
CAediting_66627	chr1_54034650_-	SINE	Alu	AluSz
CAediting_66628	chr1_54034652_-	SINE	Alu	AluSz
CAediting_66629	chr1_54034674_-	SINE	Alu	AluSz
CAediting_66630	chr1_54034687_-	SINE	Alu	AluSz
CAediting_66631	chr1_54035621_-	SINE	Alu	AluJb
CAediting_66632	chr1_54035622_-	SINE	Alu	AluJb
CAediting_66633	chr1_54035626_-	SINE	Alu	AluJb
CAediting_66634	chr1_54035627_-	SINE	Alu	AluJb
CAediting_66635	chr1_54035643_-	SINE	Alu	AluJb
CAediting_66636	chr1_54035660_-	SINE	Alu	AluJb
CAediting_66637	chr1_54035705_-	SINE	Alu	AluJb
CAediting_66638	chr1_54035710_-	SINE	Alu	AluJb
CAediting_66639	chr1_54035840_-	SINE	Alu	AluJb
CAediting_66640	chr1_54035869_-	SINE	Alu	AluJb
CAediting_66641	chr1_54036005_-	SINE	Alu	AluSz
CAediting_66642	chr1_54036054_-	SINE	Alu	AluSz
CAediting_66643	chr1_54036092_-	SINE	Alu	AluSz
CAediting_66644	chr1_54036099_-	SINE	Alu	AluSz
CAediting_66645	chr1_54036115_-	SINE	Alu	AluSz
CAediting_66646	chr1_54036118_-	SINE	Alu	AluSz
CAediting_66647	chr1_54036159_-	SINE	Alu	AluSz
CAediting_66648	chr1_54036218_-	SINE	Alu	AluSz
CAediting_66649	chr1_54036219_-	SINE	Alu	AluSz
CAediting_66650	chr1_54036251_-	SINE	Alu	AluSz
CAediting_66651	chr1_54036273_-	SINE	Alu	AluSz
CAediting_66652	chr1_54038990_-	SINE	Alu	AluJb
CAediting_66653	chr1_54044637_-	SINE	Alu	FLAM_C
CAediting_66654	chr1_54047716_-	SINE	Alu	AluJr
CAediting_66655	chr1_54047717_-	SINE	Alu	AluJr
CAediting_66656	chr1_54047726_-	SINE	Alu	AluJr
CAediting_66657	chr1_54047774_-	SINE	Alu	AluJr
CAediting_66658	chr1_54047776_-	SINE	Alu	AluJr
CAediting_66659	chr1_54047829_-	SINE	Alu	AluJr
CAediting_66660	chr1_54047848_-	SINE	Alu	AluJr
CAediting_66661	chr1_54047853_-	SINE	Alu	AluJr
CAediting_66662	chr1_54047868_-	SINE	Alu	AluJr
CAediting_66663	chr1_54047884_-	SINE	Alu	AluJr
CAediting_66664	chr1_54047885_-	SINE	Alu	AluJr
CAediting_66665	chr1_54047911_-	SINE	Alu	AluJr
CAediting_66666	chr1_54047916_-	SINE	Alu	AluJr
CAediting_66667	chr1_54047932_-	SINE	Alu	AluJr
CAediting_66668	chr1_54047941_-	SINE	Alu	AluJr
CAediting_66669	chr1_54047954_-	SINE	Alu	AluJr
CAediting_66670	chr1_54049722_-	SINE	Alu	AluJo
CAediting_66671	chr1_54049734_-	SINE	Alu	AluJo
CAediting_66672	chr1_54049735_-	SINE	Alu	AluJo
CAediting_66673	chr1_54050194_-	SINE	Alu	AluSx
CAediting_66674	chr1_54050324_-	SINE	Alu	AluSx
CAediting_66675	chr1_54050341_-	SINE	Alu	AluSx
CAediting_66676	chr1_54050342_-	SINE	Alu	AluSx
CAediting_66677	chr1_54050390_-	SINE	Alu	AluSx
CAediting_66678	chr1_54050395_-	SINE	Alu	AluSx
CAediting_66679	chr1_54050396_-	SINE	Alu	AluSx
CAediting_66680	chr1_54050404_-	SINE	Alu	AluSx
CAediting_66681	chr1_54050655_-	SINE	Alu	AluSq2
CAediting_66682	chr1_54050656_-	SINE	Alu	AluSq2
CAediting_66683	chr1_54050680_-	SINE	Alu	AluSq2
CAediting_66684	chr1_54050763_-	SINE	Alu	AluSq2
CAediting_66685	chr1_54050781_-	SINE	Alu	AluSq2
CAediting_66686	chr1_54051009_-	SINE	Alu	AluSz6
CAediting_66687	chr1_54051087_-	SINE	Alu	AluSz6
CAediting_66688	chr1_54051122_-	SINE	Alu	AluSz6
CAediting_66689	chr1_54051127_-	SINE	Alu	AluSz6
CAediting_66690	chr1_54051128_-	SINE	Alu	AluSz6
CAediting_66691	chr1_54051136_-	SINE	Alu	AluSz6
CAediting_66692	chr1_54051143_-	SINE	Alu	AluSz6

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RNA A-to-I editing events in the alternative splicing sites for TMEM59

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000116209.10.TMEM59.

Correlation between RNA A-to-I editing and PSI for ENSG00000116209.10.TMEM59.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMEM59

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ESCA.CAediting_66565.ENSG00000116209.TMEM59.png
Soverview

ESCA.CAediting_66574.ENSG00000116209.TMEM59.png
Soverview

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Protein coding region RNA A-to-I editings for TMEM59

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TMEM59

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_66477	chr1_54027524_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3189-3p	54027523	54027529	7mer-m8	54027522	54027544	153.00	-25.70
CAediting_66477	chr1_54027524_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6813-3p	54027522	54027528	7mer-m8	54027521	54027541	140.00	-10.68
CAediting_66478	chr1_54027525_-	ENSG00000116209.10	ENST00000234831	hsa-miR-326	54027523	54027529	7mer-m8	54027522	54027541	140.00	-13.25
CAediting_66478	chr1_54027525_-	ENSG00000116209.10	ENST00000234831	hsa-miR-330-5p	54027523	54027529	7mer-m8	54027522	54027545	143.00	-20.01
CAediting_66478	chr1_54027525_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4314	54027524	54027530	7mer-m8	54027523	54027541	143.00	-20.84
CAediting_66478	chr1_54027525_-	ENSG00000116209.10	ENST00000234831	hsa-miR-514a-5p	54027522	54027528	7mer-m8	54027521	54027544	150.00	-18.62
CAediting_66478	chr1_54027525_-	ENSG00000116209.10	ENST00000234831	hsa-miR-514a-5p	54027522	54027528	7mer-m8	54027521	54027544	150.00	-18.62
CAediting_66478	chr1_54027525_-	ENSG00000116209.10	ENST00000234831	hsa-miR-514a-5p	54027522	54027528	7mer-m8	54027521	54027544	150.00	-18.62
CAediting_66481	chr1_54027547_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4771	54027542	54027548	7mer-m8	54027541	54027559	147.00	-15.18
CAediting_66481	chr1_54027547_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4771	54027542	54027548	7mer-m8	54027541	54027559	147.00	-15.18
CAediting_66482	chr1_54027548_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1288-5p	54027543	54027549	7mer-m8	54027542	54027564	140.00	-17.96
CAediting_66482	chr1_54027548_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3622a-3p	54027547	54027554	8mer-1a	54027547	54027568	140.00	-15.99
CAediting_66482	chr1_54027548_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3622b-3p	54027547	54027554	8mer-1a	54027547	54027567	149.00	-20.31
CAediting_66485	chr1_54027577_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3940-3p	54027573	54027579	7mer-m8	54027572	54027593	143.00	-21.15
CAediting_66486	chr1_54027586_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4445-3p	54027585	54027591	7mer-m8	54027584	54027604	150.00	-19.48
CAediting_66486	chr1_54027586_-	ENSG00000116209.10	ENST00000234831	hsa-miR-548al	54027585	54027591	7mer-m8	54027584	54027607	151.00	-16.07
CAediting_66489	chr1_54027602_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3675-3p	54027598	54027604	7mer-m8	54027597	54027619	148.00	-14.37
CAediting_66489	chr1_54027602_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4684-5p	54027599	54027605	7mer-m8	54027598	54027620	163.00	-15.31
CAediting_66490	chr1_54027603_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6837-3p	54027599	54027606	8mer-1a	54027599	54027621	146.00	-11.10
CAediting_66516	chr1_54030492_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4659a-5p	54030488	54030495	8mer-1a	54030488	54030509	145.00	-14.33
CAediting_66516	chr1_54030492_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4659b-5p	54030488	54030495	8mer-1a	54030488	54030506	145.00	-14.05
CAediting_66516	chr1_54030492_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4716-5p	54030491	54030497	7mer-m8	54030490	54030511	148.00	-13.48
CAediting_66516	chr1_54030492_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4776-3p	54030488	54030494	7mer-m8	54030487	54030508	151.00	-19.55
CAediting_66516	chr1_54030492_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4776-3p	54030488	54030494	7mer-m8	54030487	54030508	151.00	-19.55
CAediting_66531	chr1_54030565_-	ENSG00000116209.10	ENST00000234831	hsa-miR-8052	54030560	54030566	7mer-1a	54030560	54030578	140.00	-24.15
CAediting_66532	chr1_54030566_-	ENSG00000116209.10	ENST00000234831	hsa-miR-513a-5p	54030565	54030571	7mer-m8	54030564	54030581	144.00	-16.68
CAediting_66532	chr1_54030566_-	ENSG00000116209.10	ENST00000234831	hsa-miR-513a-5p	54030565	54030571	7mer-m8	54030564	54030581	144.00	-16.68
CAediting_66532	chr1_54030566_-	ENSG00000116209.10	ENST00000234831	hsa-miR-638	54030560	54030566	7mer-1a	54030560	54030584	157.00	-32.92
CAediting_66533	chr1_54030574_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4634	54030570	54030576	7mer-m8	54030569	54030587	145.00	-19.69
CAediting_66536	chr1_54030995_-	ENSG00000116209.10	ENST00000234831	hsa-miR-106a-3p	54030993	54030998	6mer	54030992	54031013	141.00	-21.13
CAediting_66537	chr1_54031007_-	ENSG00000116209.10	ENST00000234831	hsa-miR-432-5p	54031007	54031012	6mer	54031006	54031028	141.00	-29.32
CAediting_66537	chr1_54031007_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6813-3p	54031005	54031011	7mer-m8	54031004	54031024	140.00	-13.16
CAediting_66538	chr1_54031008_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1299	54031007	54031013	7mer-m8	54031006	54031028	154.00	-22.35
CAediting_66538	chr1_54031008_-	ENSG00000116209.10	ENST00000234831	hsa-miR-514a-5p	54031005	54031011	7mer-m8	54031004	54031026	149.00	-18.95
CAediting_66538	chr1_54031008_-	ENSG00000116209.10	ENST00000234831	hsa-miR-514a-5p	54031005	54031011	7mer-m8	54031004	54031026	149.00	-18.95
CAediting_66538	chr1_54031008_-	ENSG00000116209.10	ENST00000234831	hsa-miR-514a-5p	54031005	54031011	7mer-m8	54031004	54031026	149.00	-18.95
CAediting_66538	chr1_54031008_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518c-5p	54031006	54031012	7mer-m8	54031005	54031027	151.00	-20.63
CAediting_66540	chr1_54031018_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3136-3p	54031014	54031020	7mer-m8	54031013	54031034	140.00	-14.67
CAediting_66540	chr1_54031018_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7155-3p	54031014	54031020	7mer-m8	54031013	54031031	145.00	-16.62
CAediting_66545	chr1_54031047_-	ENSG00000116209.10	ENST00000234831	hsa-miR-28-5p	54031042	54031048	7mer-m8	54031041	54031061	151.00	-22.03
CAediting_66545	chr1_54031047_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3139	54031042	54031048	7mer-m8	54031041	54031063	165.00	-26.52
CAediting_66545	chr1_54031047_-	ENSG00000116209.10	ENST00000234831	hsa-miR-708-5p	54031042	54031048	7mer-m8	54031041	54031062	150.00	-22.21
CAediting_66475	chr1_54027503_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4641	54027501	54027507	7mer-m8	54027500	54027523	150.00	-19.17
CAediting_66475	chr1_54027503_-	ENSG00000116209.10	ENST00000234831	hsa-miR-663b	54027498	54027504	7mer-m8	54027497	54027518	153.00	-27.96
CAediting_66475	chr1_54027503_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6872-3p	54027503	54027509	7mer-m8	54027502	54027522	147.00	-24.12
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6771-5p	54027524	54027531	8mer-1a	54027524	54027543	152.00	-26.14
CAediting_66484	chr1_54027564_-	ENSG00000116209.10	ENST00000234831	hsa-miR-28-5p	54027559	54027565	7mer-m8	54027558	54027578	151.00	-22.03
CAediting_66484	chr1_54027564_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3139	54027559	54027565	7mer-m8	54027558	54027580	165.00	-26.52
CAediting_66484	chr1_54027564_-	ENSG00000116209.10	ENST00000234831	hsa-miR-708-5p	54027559	54027565	7mer-m8	54027558	54027579	150.00	-22.21
CAediting_66487	chr1_54027599_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1224-3p	54027595	54027601	7mer-m8	54027594	54027614	141.00	-18.52
CAediting_66492	chr1_54027612_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4801	54027611	54027616	6mer	54027610	54027633	148.00	-16.74
CAediting_66493	chr1_54027647_-	ENSG00000116209.10	ENST00000234831	hsa-miR-17-3p	54027644	54027650	7mer-m8	54027643	54027665	162.00	-23.73
CAediting_66495	chr1_54027660_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6852-5p	54027659	54027664	6mer	54027658	54027679	149.00	-31.00
CAediting_66497	chr1_54027682_-	ENSG00000116209.10	ENST00000234831	hsa-miR-589-5p	54027677	54027683	7mer-m8	54027676	54027696	150.00	-18.31
CAediting_66498	chr1_54027686_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4539	54027686	54027691	6mer	54027685	54027704	148.00	-24.81
CAediting_66498	chr1_54027686_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6078	54027682	54027689	8mer-1a	54027682	54027704	156.00	-30.49
CAediting_66500	chr1_54027693_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1247-3p	54027691	54027697	7mer-m8	54027690	54027714	161.00	-26.54
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-25-3p	54027723	54027729	7mer-m8	54027722	54027747	154.00	-22.71
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-32-5p	54027723	54027729	7mer-m8	54027722	54027743	140.00	-12.59
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-363-3p	54027723	54027729	7mer-m8	54027722	54027748	152.00	-20.52
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-367-3p	54027723	54027729	7mer-m8	54027722	54027743	149.00	-14.01
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-92a-3p	54027723	54027729	7mer-m8	54027722	54027747	158.00	-26.82
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-92a-3p	54027723	54027729	7mer-m8	54027722	54027747	158.00	-26.82
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-92b-3p	54027723	54027729	7mer-m8	54027722	54027747	158.00	-23.12
CAediting_66506	chr1_54027749_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4709-5p	54027749	54027755	7mer-m8	54027748	54027769	154.00	-17.24
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-10a-5p	54027761	54027767	7mer-m8	54027760	54027780	142.00	-12.31
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-10b-5p	54027761	54027767	7mer-m8	54027760	54027785	144.00	-11.87
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-339-5p	54027762	54027768	7mer-m8	54027761	54027782	151.00	-17.11
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4421	54027763	54027769	7mer-m8	54027762	54027783	159.00	-17.33
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4725-5p	54027760	54027766	7mer-m8	54027759	54027779	140.00	-15.96
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-504-5p	54027760	54027766	7mer-m8	54027759	54027778	147.00	-18.15
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5699-3p	54027763	54027769	7mer-m8	54027762	54027783	141.00	-16.39
CAediting_66509	chr1_54027767_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5001-3p	54027763	54027769	7mer-m8	54027762	54027783	145.00	-15.37
CAediting_66512	chr1_54030200_-	ENSG00000116209.10	ENST00000234831	hsa-miR-10392-3p	54030200	54030206	7mer-m8	54030199	54030222	145.00	-25.24
CAediting_66519	chr1_54030505_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3663-5p	54030505	54030511	7mer-m8	54030504	54030523	148.00	-21.98
CAediting_66519	chr1_54030505_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6131	54030504	54030510	7mer-m8	54030503	54030521	140.00	-18.33
CAediting_66520	chr1_54030509_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6878-3p	54030505	54030512	8mer-1a	54030505	54030527	150.00	-19.47
CAediting_66521	chr1_54030511_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4281	54030506	54030513	8mer-1a	54030506	54030523	142.00	-19.48
CAediting_66521	chr1_54030511_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6716-3p	54030511	54030517	7mer-m8	54030510	54030529	152.00	-22.70
CAediting_66522	chr1_54030517_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4732-3p	54030517	54030523	7mer-m8	54030516	54030536	155.00	-22.23
CAediting_66526	chr1_54030536_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6801-3p	54030535	54030541	7mer-m8	54030534	54030553	140.00	-21.64
CAediting_66526	chr1_54030536_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6810-3p	54030535	54030541	7mer-m8	54030534	54030553	153.00	-27.52
CAediting_66530	chr1_54030560_-	ENSG00000116209.10	ENST00000234831	hsa-miR-371a-3p	54030555	54030561	7mer-m8	54030554	54030576	145.00	-17.36
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1295a	54030968	54030974	7mer-m8	54030967	54030987	140.00	-14.64
CAediting_66539	chr1_54031009_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6125	54031008	54031015	8mer-1a	54031008	54031028	151.00	-23.04
CAediting_66542	chr1_54031026_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1228-5p	54031022	54031028	7mer-m8	54031021	54031040	145.00	-24.49
CAediting_66546	chr1_54031048_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1289	54031043	54031049	7mer-m8	54031042	54031063	154.00	-21.53
CAediting_66546	chr1_54031048_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1289	54031043	54031049	7mer-m8	54031042	54031063	154.00	-21.53
CAediting_66547	chr1_54031060_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3940-3p	54031056	54031062	7mer-m8	54031055	54031073	149.00	-28.63
CAediting_66548	chr1_54031069_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4783-3p	54031067	54031073	7mer-m8	54031066	54031086	154.00	-26.15
CAediting_66552	chr1_54031086_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6509-3p	54031084	54031089	6mer	54031083	54031104	144.00	-15.26
CAediting_66558	chr1_54031168_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6078	54031164	54031171	8mer-1a	54031164	54031184	148.00	-24.16
CAediting_66491	chr1_54027606_-	ENSG00000116209.10	ENST00000234831	hsa-miR-9902	54027605	54027611	7mer-m8	54027604	54027628	154.00	-16.02
CAediting_66491	chr1_54027606_-	ENSG00000116209.10	ENST00000234831	hsa-miR-9902	54027605	54027611	7mer-m8	54027604	54027628	154.00	-16.02
CAediting_66494	chr1_54027657_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3614-5p	54027657	54027663	7mer-m8	54027656	54027679	150.00	-25.72
CAediting_66494	chr1_54027657_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4691-3p	54027653	54027659	7mer-m8	54027652	54027678	153.00	-27.69
CAediting_66511	chr1_54030197_-	ENSG00000116209.10	ENST00000234831	hsa-miR-331-3p	54030196	54030202	7mer-m8	54030195	54030215	153.00	-23.56
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518a-3p	54030553	54030559	7mer-m8	54030552	54030573	145.00	-17.15
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518a-3p	54030553	54030559	7mer-m8	54030552	54030573	145.00	-17.15
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518b	54030553	54030559	7mer-m8	54030552	54030572	146.00	-21.79
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518c-3p	54030553	54030559	7mer-m8	54030552	54030573	146.00	-18.98
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518d-3p	54030553	54030559	7mer-m8	54030552	54030572	145.00	-17.84
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518e-3p	54030554	54030560	7mer-m8	54030553	54030574	144.00	-18.65
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-518f-3p	54030553	54030559	7mer-m8	54030552	54030572	145.00	-17.48
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-526a-3p	54030553	54030559	7mer-m8	54030552	54030572	146.00	-17.71

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_66531	chr1_54030565_-	ENSG00000116209.10	ENST00000234831	hsa-miR-10399-5p	54030564	54030570	7mer-m8	54030563	54030584	144	-10.39
CAediting_66532	chr1_54030566_-	ENSG00000116209.10	ENST00000234831	hsa-miR-10399-5p	54030564	54030570	7mer-m8	54030563	54030584	144	-10.39
CAediting_66495	chr1_54027660_-	ENSG00000116209.10	ENST00000234831	hsa-miR-12126	54027657	54027664	8mer-1a	54027657	54027680	147	-12.83
CAediting_66525	chr1_54030530_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1245a	54030528	54030534	7mer-m8	54030527	54030547	141	-14.25
CAediting_66513	chr1_54030210_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1245a	54030208	54030214	7mer-m8	54030207	54030227	152	-13.36
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1285-3p	54030972	54030978	7mer-m8	54030971	54030991	141	-16.09
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1285-3p	54030972	54030978	7mer-m8	54030971	54030991	141	-16.09
CAediting_66514	chr1_54030488_-	ENSG00000116209.10	ENST00000234831	hsa-miR-193a-5p	54030483	54030489	7mer-m8	54030482	54030502	141	-14.82
CAediting_66506	chr1_54027749_-	ENSG00000116209.10	ENST00000234831	hsa-miR-194-5p	54027748	54027754	7mer-m8	54027747	54027768	140	-11.97
CAediting_66506	chr1_54027749_-	ENSG00000116209.10	ENST00000234831	hsa-miR-194-5p	54027748	54027754	7mer-m8	54027747	54027768	140	-11.97
CAediting_66526	chr1_54030536_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1976	54030535	54030541	7mer-m8	54030534	54030555	144	-25.54
CAediting_66527	chr1_54030539_-	ENSG00000116209.10	ENST00000234831	hsa-miR-1976	54030535	54030541	7mer-m8	54030534	54030555	144	-25.54
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-302a-3p	54030554	54030560	7mer-m8	54030553	54030574	143	-14.98
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-302b-3p	54030554	54030560	7mer-m8	54030553	54030575	141	-9.83
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-302c-3p	54030554	54030560	7mer-m8	54030553	54030573	145	-11.96
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-302d-3p	54030554	54030560	7mer-m8	54030553	54030580	148	-13.74
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-302e	54030554	54030560	7mer-m8	54030553	54030569	141	-8.62
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-30b-3p	54027525	54027532	8mer-1a	54027525	54027546	151	-15.94
CAediting_66542	chr1_54031026_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3165	54031024	54031030	7mer-m8	54031023	54031042	145	-16.11
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3187-5p	54030972	54030978	7mer-m8	54030971	54030991	148	-19.05
CAediting_66547	chr1_54031060_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3190-5p	54031059	54031065	7mer-m8	54031058	54031077	151	-19.5
CAediting_66500	chr1_54027693_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3192-5p	54027692	54027698	7mer-m8	54027691	54027718	155	-26.9
CAediting_66550	chr1_54031082_-	ENSG00000116209.10	ENST00000234831	hsa-miR-340-3p	54031079	54031085	7mer-m8	54031078	54031099	149	-17.74
CAediting_66551	chr1_54031084_-	ENSG00000116209.10	ENST00000234831	hsa-miR-340-3p	54031079	54031085	7mer-m8	54031078	54031099	149	-17.74
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3609	54030553	54030558	6mer	54030552	54030574	140	-19
CAediting_66543	chr1_54031035_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3622a-3p	54031030	54031037	8mer-1a	54031030	54031051	144	-13.89
CAediting_66543	chr1_54031035_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3622b-3p	54031030	54031037	8mer-1a	54031030	54031050	153	-19.33
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3664-5p	54027761	54027767	7mer-m8	54027760	54027781	153	-15.28
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3689a-3p	54027525	54027532	8mer-1a	54027525	54027545	147	-22.03
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3689b-3p	54027525	54027532	8mer-1a	54027525	54027545	147	-20.79
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3689c	54027525	54027532	8mer-1a	54027525	54027545	147	-20.79
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-372-3p	54030554	54030560	7mer-m8	54030553	54030580	155	-20.46
CAediting_66512	chr1_54030200_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3922-3p	54030199	54030204	6mer	54030198	54030217	140	-20.09
CAediting_66504	chr1_54027738_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3925-3p	54027737	54027742	6mer	54027736	54027756	142	-17.71
CAediting_66496	chr1_54027669_-	ENSG00000116209.10	ENST00000234831	hsa-miR-3929	54027665	54027671	7mer-m8	54027664	54027685	152	-20.15
CAediting_66505	chr1_54027745_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4293	54027741	54027747	7mer-m8	54027740	54027754	144	-19.75
CAediting_66548	chr1_54031069_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4299	54031068	54031074	7mer-m8	54031067	54031084	143	-12.19
CAediting_66549	chr1_54031072_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4299	54031068	54031074	7mer-m8	54031067	54031084	143	-12.19
CAediting_66507	chr1_54027757_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4302	54027752	54027758	7mer-m8	54027751	54027770	145	-14.83
CAediting_66514	chr1_54030488_-	ENSG00000116209.10	ENST00000234831	hsa-miR-431-5p	54030485	54030491	7mer-m8	54030484	54030505	143	-13.03
CAediting_66515	chr1_54030489_-	ENSG00000116209.10	ENST00000234831	hsa-miR-431-5p	54030485	54030491	7mer-m8	54030484	54030505	143	-13.03
CAediting_66496	chr1_54027669_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4478	54027665	54027671	7mer-m8	54027664	54027682	149	-24.84
CAediting_66480	chr1_54027534_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4478	54027530	54027536	7mer-m8	54027529	54027545	150	-23.72
CAediting_66557	chr1_54031151_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4478	54031147	54031153	7mer-m8	54031146	54031161	149	-25.05
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4505	54030970	54030976	7mer-m8	54030969	54030986	148	-22.68
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4522	54027760	54027766	7mer-m8	54027759	54027779	148	-12.83
CAediting_66496	chr1_54027669_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4649-3p	54027668	54027674	7mer-m8	54027667	54027687	143	-14.99
CAediting_66557	chr1_54031151_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4649-3p	54031150	54031156	7mer-m8	54031149	54031169	140	-14.11
CAediting_66522	chr1_54030517_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4680-5p	54030513	54030518	6mer	54030512	54030532	142	-19.36
CAediting_66511	chr1_54030197_-	ENSG00000116209.10	ENST00000234831	hsa-miR-4680-5p	54030192	54030198	7mer-1a	54030192	54030212	142	-20.05
CAediting_66480	chr1_54027534_-	ENSG00000116209.10	ENST00000234831	hsa-miR-485-5p	54027529	54027535	7mer-m8	54027528	54027550	151	-16.58
CAediting_66500	chr1_54027693_-	ENSG00000116209.10	ENST00000234831	hsa-miR-490-3p	54027689	54027695	7mer-m8	54027688	54027708	144	-15.97
CAediting_66502	chr1_54027724_-	ENSG00000116209.10	ENST00000234831	hsa-miR-508-3p	54027722	54027728	7mer-m8	54027721	54027743	142	-12.13
CAediting_66503	chr1_54027727_-	ENSG00000116209.10	ENST00000234831	hsa-miR-508-3p	54027722	54027728	7mer-m8	54027721	54027743	142	-12.13
CAediting_66504	chr1_54027738_-	ENSG00000116209.10	ENST00000234831	hsa-miR-508-5p	54027736	54027742	7mer-m8	54027735	54027757	150	-19.38
CAediting_66530	chr1_54030560_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5089-5p	54030560	54030566	7mer-m8	54030559	54030581	148	-14.13
CAediting_66531	chr1_54030565_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5089-5p	54030560	54030566	7mer-m8	54030559	54030581	148	-14.13
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-512-3p	54030555	54030561	7mer-m8	54030554	54030575	149	-15.51
CAediting_66530	chr1_54030560_-	ENSG00000116209.10	ENST00000234831	hsa-miR-512-3p	54030555	54030561	7mer-m8	54030554	54030575	149	-15.51
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-512-3p	54030555	54030561	7mer-m8	54030554	54030575	149	-15.51
CAediting_66530	chr1_54030560_-	ENSG00000116209.10	ENST00000234831	hsa-miR-512-3p	54030555	54030561	7mer-m8	54030554	54030575	149	-15.51
CAediting_66509	chr1_54027767_-	ENSG00000116209.10	ENST00000234831	hsa-miR-514b-5p	54027767	54027772	6mer	54027766	54027787	146	-12.74
CAediting_66485	chr1_54027577_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5189-5p	54027576	54027582	7mer-m8	54027575	54027600	154	-26.41
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-519d-3p	54030553	54030559	7mer-m8	54030552	54030572	146	-14.53
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-520a-3p	54030554	54030560	7mer-m8	54030553	54030574	140	-11.03
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-520b-3p	54030554	54030560	7mer-m8	54030553	54030572	141	-16.52
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-520c-3p	54030554	54030560	7mer-m8	54030553	54030573	146	-16.52
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-520d-3p	54030554	54030560	7mer-m8	54030553	54030574	140	-15.12
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-520e-3p	54030554	54030560	7mer-m8	54030553	54030573	140	-13.32
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-520g-3p	54030552	54030558	7mer-m8	54030551	54030573	151	-16.77
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-520h	54030552	54030558	7mer-m8	54030551	54030572	150	-15.08
CAediting_66529	chr1_54030557_-	ENSG00000116209.10	ENST00000234831	hsa-miR-526b-3p	54030553	54030559	7mer-m8	54030552	54030572	146	-16.66
CAediting_66483	chr1_54027552_-	ENSG00000116209.10	ENST00000234831	hsa-miR-544b	54027550	54027556	7mer-m8	54027549	54027569	153	-18.39
CAediting_66547	chr1_54031060_-	ENSG00000116209.10	ENST00000234831	hsa-miR-548s	54031060	54031066	7mer-m8	54031059	54031080	143	-14.4
CAediting_66492	chr1_54027612_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5680	54027606	54027612	7mer-1a	54027606	54027627	140	-9.2
CAediting_66494	chr1_54027657_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5690	54027653	54027659	7mer-m8	54027652	54027672	145	-16.74
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-5787	54030970	54030976	7mer-m8	54030969	54030987	148	-23.9
CAediting_66550	chr1_54031082_-	ENSG00000116209.10	ENST00000234831	hsa-miR-593-3p	54031081	54031086	6mer	54031080	54031098	140	-18.96
CAediting_66551	chr1_54031084_-	ENSG00000116209.10	ENST00000234831	hsa-miR-593-3p	54031081	54031086	6mer	54031080	54031098	140	-18.96
CAediting_66552	chr1_54031086_-	ENSG00000116209.10	ENST00000234831	hsa-miR-593-3p	54031081	54031086	6mer	54031080	54031098	140	-18.96
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-612	54030972	54030978	7mer-m8	54030971	54030994	153	-25.03
CAediting_66485	chr1_54027577_-	ENSG00000116209.10	ENST00000234831	hsa-miR-612	54027576	54027582	7mer-m8	54027575	54027599	155	-26.24
CAediting_66531	chr1_54030565_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6504-3p	54030564	54030570	7mer-m8	54030563	54030584	152	-15.11
CAediting_66532	chr1_54030566_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6504-3p	54030564	54030570	7mer-m8	54030563	54030584	152	-15.11
CAediting_66530	chr1_54030560_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6506-5p	54030559	54030565	7mer-m8	54030558	54030580	144	-13.78
CAediting_66504	chr1_54027738_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6512-3p	54027738	54027744	7mer-m8	54027737	54027758	155	-18.31
CAediting_66510	chr1_54030192_-	ENSG00000116209.10	ENST00000234831	hsa-miR-653-5p	54030189	54030195	7mer-m8	54030188	54030208	140	-13.97
CAediting_66526	chr1_54030536_-	ENSG00000116209.10	ENST00000234831	hsa-miR-660-3p	54030533	54030540	8mer-1a	54030533	54030553	143	-18.23
CAediting_66527	chr1_54030539_-	ENSG00000116209.10	ENST00000234831	hsa-miR-660-3p	54030533	54030540	8mer-1a	54030533	54030553	143	-18.23
CAediting_66485	chr1_54027577_-	ENSG00000116209.10	ENST00000234831	hsa-miR-661	54027574	54027580	7mer-m8	54027573	54027597	151	-24.47
CAediting_66504	chr1_54027738_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6720-5p	54027738	54027744	7mer-m8	54027737	54027759	151	-20.49
CAediting_66542	chr1_54031026_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6745	54031022	54031029	8mer-1a	54031022	54031046	150	-25.79
CAediting_66541	chr1_54031022_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6748-5p	54031021	54031027	7mer-m8	54031020	54031040	149	-22.78
CAediting_66542	chr1_54031026_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6748-5p	54031021	54031027	7mer-m8	54031020	54031040	149	-22.78
CAediting_66542	chr1_54031026_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6756-5p	54031022	54031028	7mer-1a	54031022	54031046	148	-30.35
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6779-5p	54027525	54027532	8mer-1a	54027525	54027543	148	-23.32
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6780a-5p	54027525	54027532	8mer-1a	54027525	54027548	148	-21.26
CAediting_66533	chr1_54030574_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6807-5p	54030574	54030580	7mer-m8	54030573	54030595	152	-26.91
CAediting_66550	chr1_54031082_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6827-3p	54031079	54031085	7mer-m8	54031078	54031098	153	-17.53
CAediting_66551	chr1_54031084_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6827-3p	54031079	54031085	7mer-m8	54031078	54031098	153	-17.53
CAediting_66520	chr1_54030509_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6843-3p	54030505	54030512	8mer-1a	54030505	54030524	152	-19.26
CAediting_66521	chr1_54030511_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6843-3p	54030505	54030512	8mer-1a	54030505	54030524	152	-19.26
CAediting_66475	chr1_54027503_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6847-3p	54027501	54027507	7mer-m8	54027500	54027522	152	-20.78
CAediting_66476	chr1_54027506_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6847-3p	54027501	54027507	7mer-m8	54027500	54027522	152	-20.78
CAediting_66520	chr1_54030509_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6848-3p	54030505	54030512	8mer-1a	54030505	54030522	142	-14.87
CAediting_66521	chr1_54030511_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6848-3p	54030505	54030512	8mer-1a	54030505	54030522	142	-14.87
CAediting_66534	chr1_54030973_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6860	54030972	54030978	7mer-m8	54030971	54030992	143	-17.48
CAediting_66485	chr1_54027577_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6860	54027576	54027582	7mer-m8	54027575	54027593	148	-19.34
CAediting_66507	chr1_54027757_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6864-3p	54027757	54027763	7mer-m8	54027756	54027777	153	-17.84
CAediting_66505	chr1_54027745_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6869-5p	54027745	54027750	6mer	54027744	54027765	143	-15.72
CAediting_66506	chr1_54027749_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6869-5p	54027745	54027750	6mer	54027744	54027765	143	-15.72
CAediting_66528	chr1_54030544_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6878-3p	54030543	54030550	8mer-1a	54030543	54030563	142	-14.14
CAediting_66496	chr1_54027669_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6884-5p	54027664	54027670	7mer-m8	54027663	54027686	153	-22.34
CAediting_66508	chr1_54027763_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6888-3p	54027763	54027769	7mer-m8	54027762	54027782	151	-14.42
CAediting_66509	chr1_54027767_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6888-3p	54027763	54027769	7mer-m8	54027762	54027782	151	-14.42
CAediting_66476	chr1_54027506_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6894-3p	54027506	54027512	7mer-m8	54027505	54027525	145	-15.3
CAediting_66532	chr1_54030566_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7151-3p	54030565	54030572	8mer-1a	54030565	54030589	145	-16.51
CAediting_66496	chr1_54027669_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7160-5p	54027667	54027673	7mer-m8	54027666	54027686	154	-24.39
CAediting_66480	chr1_54027534_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7160-5p	54027532	54027538	7mer-m8	54027531	54027549	154	-23.42
CAediting_66557	chr1_54031151_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7160-5p	54031149	54031155	7mer-m8	54031148	54031168	146	-20.4
CAediting_66543	chr1_54031035_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7162-3p	54031034	54031040	7mer-m8	54031033	54031053	142	-17.47
CAediting_66517	chr1_54030494_-	ENSG00000116209.10	ENST00000234831	hsa-miR-744-3p	54030494	54030500	7mer-m8	54030493	54030514	140	-10.92
CAediting_66518	chr1_54030496_-	ENSG00000116209.10	ENST00000234831	hsa-miR-744-3p	54030494	54030500	7mer-m8	54030493	54030514	140	-10.92
CAediting_66504	chr1_54027738_-	ENSG00000116209.10	ENST00000234831	hsa-miR-766-3p	54027737	54027743	7mer-m8	54027736	54027757	145	-21.96
CAediting_66548	chr1_54031069_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7855-5p	54031069	54031074	6mer	54031068	54031088	140	-26.02
CAediting_66549	chr1_54031072_-	ENSG00000116209.10	ENST00000234831	hsa-miR-7855-5p	54031069	54031074	6mer	54031068	54031088	140	-26.02
CAediting_66506	chr1_54027749_-	ENSG00000116209.10	ENST00000234831	hsa-miR-802	54027747	54027753	7mer-m8	54027746	54027772	144	-12.61
CAediting_66542	chr1_54031026_-	ENSG00000116209.10	ENST00000234831	hsa-miR-8056	54031025	54031030	6mer	54031024	54031043	142	-18.58
CAediting_66513	chr1_54030210_-	ENSG00000116209.10	ENST00000234831	hsa-miR-8062	54030208	54030213	6mer	54030207	54030228	150	-11.16
CAediting_66513	chr1_54030210_-	ENSG00000116209.10	ENST00000234831	hsa-miR-8079	54030208	54030214	7mer-m8	54030207	54030226	140	-9.09
CAediting_66495	chr1_54027660_-	ENSG00000116209.10	ENST00000234831	hsa-miR-887-5p	54027660	54027666	7mer-m8	54027659	54027678	143	-18.12
CAediting_66478	chr1_54027525_-	ENSG00000116209.10	ENST00000234831	hsa-miR-887-5p	54027524	54027531	8mer-1a	54027524	54027543	143	-13.53
CAediting_66479	chr1_54027526_-	ENSG00000116209.10	ENST00000234831	hsa-miR-887-5p	54027524	54027531	8mer-1a	54027524	54027543	143	-13.53
CAediting_66485	chr1_54027577_-	ENSG00000116209.10	ENST00000234831	hsa-miR-939-3p	54027575	54027581	7mer-m8	54027574	54027594	140	-15.63
CAediting_66486	chr1_54027586_-	ENSG00000116209.10	ENST00000234831	hsa-miR-942-3p	54027583	54027589	7mer-m8	54027582	54027602	152	-14.56

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000116209.10	ENST00000234831	hsa-miR-548aa	54030095	54030102	8mer-1a	54030095	54030119	140	-7.36
CAediting_1229413	chr17_67471544_+	ENSG00000116209.10	ENST00000234831	hsa-miR-548aa	54028139	54028145	7mer-m8	54028138	54028163	141	-14.06
CAediting_1229413	chr17_67471544_+	ENSG00000116209.10	ENST00000234831	hsa-miR-548aa	54032075	54032082	8mer-1a	54032075	54032099	140	-8.99
CAediting_1229414	chr17_67471546_+	ENSG00000116209.10	ENST00000234831	hsa-miR-548aa	54029456	54029462	7mer-m8	54029455	54029479	147	-12.92
CAediting_1351755	chr19_40282625_-	ENSG00000116209.10	ENST00000234831	hsa-miR-641	54027164	54027171	8mer-1a	54027164	54027189	154	-12.17
CAediting_86358	chr1_109598906_+	ENSG00000116209.10	ENST00000234831	hsa-miR-197-5p	54031022	54031029	8mer-1a	54031022	54031050	146	-26.62
CAediting_117844	chr1_162342605_+	ENSG00000116209.10	ENST00000234831	hsa-miR-556-3p	54030174	54030180	7mer-m8	54030173	54030194	140	-10.37
CAediting_77128	chr1_85133844_+	ENSG00000116209.10	ENST00000234831	hsa-miR-4423-3p	54030973	54030979	7mer-m8	54030972	54030992	140	-13.89
CAediting_414656	chr5_72878640_+	ENSG00000116209.10	ENST00000234831	hsa-miR-4804-3p	54030648	54030655	8mer-1a	54030648	54030668	147	-15.84
CAediting_1229413	chr17_67471544_+	ENSG00000116209.10	ENST00000371348	hsa-miR-548aa	54032075	54032082	8mer-1a	54032075	54032099	140	-8.99
CAediting_1229413	chr17_67471544_+	ENSG00000116209.10	ENST00000371344	hsa-miR-548aa	54032075	54032082	8mer-1a	54032075	54032099	140	-8.99
CAediting_1229413	chr17_67471544_+	ENSG00000116209.10	ENST00000371341	hsa-miR-548aa	54032075	54032082	8mer-1a	54032075	54032099	140	-8.99
CAediting_1229415	chr17_67471547_+	ENSG00000116209.10	ENST00000371337	hsa-miR-548aa	54045576	54045582	7mer-m8	54045575	54045601	153	-10.66

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000116209.10	ENST00000234831	hsa-miR-4423-3p	54029537	54029544	8mer-1a	54029537	54029562	152	-13.19
CAediting_1229413	chr17_67471544_+	ENSG00000116209.10	ENST00000234831	hsa-miR-548aa	54026889	54026895	7mer-m8	54026888	54026914	145	-9.22
CAediting_1229414	chr17_67471546_+	ENSG00000116209.10	ENST00000234831	hsa-miR-548aa	54026889	54026895	7mer-m8	54026888	54026914	145	-9.22
CAediting_117844	chr1_162342605_+	ENSG00000116209.10	ENST00000234831	hsa-miR-556-3p	54028497	54028504	8mer-1a	54028497	54028520	143	-14.66
CAediting_228905	chr2_188297554_+	ENSG00000116209.10	ENST00000234831	hsa-miR-561-3p	54030913	54030919	7mer-m8	54030912	54030933	151	-8.12
CAediting_228905	chr2_188297554_+	ENSG00000116209.10	ENST00000234831	hsa-miR-561-3p	54027428	54027434	7mer-m8	54027427	54027448	151	-8.05
CAediting_524911	chr7_5495852_-	ENSG00000116209.10	ENST00000234831	hsa-miR-589-3p	54031590	54031596	7mer-m8	54031589	54031612	147	-11.74
CAediting_1399425	chr20_1392958_-	ENSG00000116209.10	ENST00000234831	hsa-miR-6869-5p	54027745	54027750	6mer	54027744	54027765	143	-15.72

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TMEM59

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000234831.8	protein_coding
ENST00000371344.4	protein_coding
ENST00000371348.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_66475	ENST00000234831.8	chr1_54027503_-	-1936.30	-1932.40	-2012.20
CAediting_66476	ENST00000234831.8	chr1_54027506_-	-1933.90	-1932.40	-2012.20
CAediting_66477	ENST00000234831.8	chr1_54027524_-	-1934.80	-1932.40	-2012.20
CAediting_66478	ENST00000234831.8	chr1_54027525_-	-1932.60	-1932.40	-2012.20
CAediting_66479	ENST00000234831.8	chr1_54027526_-	-1934.30	-1932.40	-2012.20
CAediting_66480	ENST00000234831.8	chr1_54027534_-	-1935.00	-1932.40	-2012.20
CAediting_66481	ENST00000234831.8	chr1_54027547_-	-1932.70	-1932.40	-2012.20
CAediting_66482	ENST00000234831.8	chr1_54027548_-	-1938.80	-1932.40	-2012.20
CAediting_66483	ENST00000234831.8	chr1_54027552_-	-1931.80	-1932.40	-2012.20
CAediting_66484	ENST00000234831.8	chr1_54027564_-	-1932.40	-1932.40	-2012.20
CAediting_66485	ENST00000234831.8	chr1_54027577_-	-1931.70	-1932.40	-2012.20
CAediting_66486	ENST00000234831.8	chr1_54027586_-	-1932.70	-1932.40	-2012.20
CAediting_66487	ENST00000234831.8	chr1_54027599_-	-1931.80	-1932.40	-2012.20
CAediting_66488	ENST00000234831.8	chr1_54027601_-	-1932.10	-1932.40	-2012.20
CAediting_66489	ENST00000234831.8	chr1_54027602_-	-1932.50	-1932.40	-2012.20
CAediting_66490	ENST00000234831.8	chr1_54027603_-	-1932.80	-1932.40	-2012.20
CAediting_66491	ENST00000234831.8	chr1_54027606_-	-1932.40	-1932.40	-2012.20
CAediting_66492	ENST00000234831.8	chr1_54027612_-	-1936.90	-1932.40	-2012.20
CAediting_66493	ENST00000234831.8	chr1_54027647_-	-1935.30	-1932.40	-2012.20
CAediting_66494	ENST00000234831.8	chr1_54027657_-	-1932.70	-1932.40	-2012.20
CAediting_66495	ENST00000234831.8	chr1_54027660_-	-1932.10	-1932.40	-2012.20
CAediting_66496	ENST00000234831.8	chr1_54027669_-	-1931.70	-1932.40	-2012.20
CAediting_66497	ENST00000234831.8	chr1_54027682_-	-1933.10	-1932.40	-2012.20
CAediting_66498	ENST00000234831.8	chr1_54027686_-	-1933.00	-1932.40	-2012.20
CAediting_66499	ENST00000234831.8	chr1_54027687_-	-1932.80	-1932.40	-2012.20
CAediting_66500	ENST00000234831.8	chr1_54027693_-	-1933.20	-1932.40	-2012.20
CAediting_66501	ENST00000234831.8	chr1_54027714_-	-1936.90	-1932.40	-2012.20
CAediting_66502	ENST00000234831.8	chr1_54027724_-	-1933.00	-1932.40	-2012.20
CAediting_66503	ENST00000234831.8	chr1_54027727_-	-1933.10	-1932.40	-2012.20
CAediting_66504	ENST00000234831.8	chr1_54027738_-	-1932.60	-1932.40	-2012.20
CAediting_66505	ENST00000234831.8	chr1_54027745_-	-1934.50	-1932.40	-2012.20
CAediting_66506	ENST00000234831.8	chr1_54027749_-	-1936.20	-1932.40	-2012.20
CAediting_66507	ENST00000234831.8	chr1_54027757_-	-1932.10	-1932.40	-2012.20
CAediting_66508	ENST00000234831.8	chr1_54027763_-	-1935.10	-1932.40	-2012.20
CAediting_66509	ENST00000234831.8	chr1_54027767_-	-1932.40	-1932.40	-2012.20
CAediting_66510	ENST00000234831.8	chr1_54030192_-	-1938.00	-1932.40	-2012.20
CAediting_66511	ENST00000234831.8	chr1_54030197_-	-1931.50	-1932.40	-2012.20
CAediting_66512	ENST00000234831.8	chr1_54030200_-	-1931.70	-1932.40	-2012.20
CAediting_66513	ENST00000234831.8	chr1_54030210_-	-1932.70	-1932.40	-2012.20
CAediting_66514	ENST00000234831.8	chr1_54030488_-	-1932.30	-1932.40	-2012.20
CAediting_66515	ENST00000234831.8	chr1_54030489_-	-1936.60	-1932.40	-2012.20
CAediting_66516	ENST00000234831.8	chr1_54030492_-	-1937.80	-1932.40	-2012.20
CAediting_66517	ENST00000234831.8	chr1_54030494_-	-1933.80	-1932.40	-2012.20
CAediting_66518	ENST00000234831.8	chr1_54030496_-	-1932.40	-1932.40	-2012.20
CAediting_66519	ENST00000234831.8	chr1_54030505_-	-1939.10	-1932.40	-2012.20
CAediting_66520	ENST00000234831.8	chr1_54030509_-	-1931.80	-1932.40	-2012.20
CAediting_66521	ENST00000234831.8	chr1_54030511_-	-1931.50	-1932.40	-2012.20
CAediting_66522	ENST00000234831.8	chr1_54030517_-	-1931.50	-1932.40	-2012.20
CAediting_66523	ENST00000234831.8	chr1_54030520_-	-1931.70	-1932.40	-2012.20
CAediting_66524	ENST00000234831.8	chr1_54030525_-	-1931.50	-1932.40	-2012.20
CAediting_66525	ENST00000234831.8	chr1_54030530_-	-1932.00	-1932.40	-2012.20
CAediting_66526	ENST00000234831.8	chr1_54030536_-	-1934.80	-1932.40	-2012.20
CAediting_66527	ENST00000234831.8	chr1_54030539_-	-1937.10	-1932.40	-2012.20
CAediting_66528	ENST00000234831.8	chr1_54030544_-	-1932.40	-1932.40	-2012.20
CAediting_66529	ENST00000234831.8	chr1_54030557_-	-1932.00	-1932.40	-2012.20
CAediting_66530	ENST00000234831.8	chr1_54030560_-	-1931.70	-1932.40	-2012.20
CAediting_66531	ENST00000234831.8	chr1_54030565_-	-1932.40	-1932.40	-2012.20
CAediting_66532	ENST00000234831.8	chr1_54030566_-	-1932.50	-1932.40	-2012.20
CAediting_66533	ENST00000234831.8	chr1_54030574_-	-1932.00	-1932.40	-2012.20
CAediting_66534	ENST00000234831.8	chr1_54030973_-	-1936.30	-1932.40	-2012.20
CAediting_66535	ENST00000234831.8	chr1_54030993_-	-1931.70	-1932.40	-2012.20
CAediting_66536	ENST00000234831.8	chr1_54030995_-	-1932.40	-1932.40	-2012.20
CAediting_66537	ENST00000234831.8	chr1_54031007_-	-1932.10	-1932.40	-2012.20
CAediting_66538	ENST00000234831.8	chr1_54031008_-	-1932.50	-1932.40	-2012.20
CAediting_66539	ENST00000234831.8	chr1_54031009_-	-1932.10	-1932.40	-2012.20
CAediting_66540	ENST00000234831.8	chr1_54031018_-	-1932.40	-1932.40	-2012.20
CAediting_66541	ENST00000234831.8	chr1_54031022_-	-1936.30	-1932.40	-2012.20
CAediting_66542	ENST00000234831.8	chr1_54031026_-	-1933.40	-1932.40	-2012.20
CAediting_66543	ENST00000234831.8	chr1_54031035_-	-1931.60	-1932.40	-2012.20
CAediting_66544	ENST00000234831.8	chr1_54031040_-	-1931.80	-1932.40	-2012.20
CAediting_66545	ENST00000234831.8	chr1_54031047_-	-1932.40	-1932.40	-2012.20
CAediting_66546	ENST00000234831.8	chr1_54031048_-	-1931.90	-1932.40	-2012.20
CAediting_66547	ENST00000234831.8	chr1_54031060_-	-1931.70	-1932.40	-2012.20
CAediting_66548	ENST00000234831.8	chr1_54031069_-	-1932.40	-1932.40	-2012.20
CAediting_66549	ENST00000234831.8	chr1_54031072_-	-1936.00	-1932.40	-2012.20
CAediting_66550	ENST00000234831.8	chr1_54031082_-	-1931.50	-1932.40	-2012.20
CAediting_66551	ENST00000234831.8	chr1_54031084_-	-1932.40	-1932.40	-2012.20
CAediting_66552	ENST00000234831.8	chr1_54031086_-	-1932.10	-1932.40	-2012.20
CAediting_66553	ENST00000234831.8	chr1_54031089_-	-1933.50	-1932.40	-2012.20
CAediting_66554	ENST00000234831.8	chr1_54031103_-	-1932.40	-1932.40	-2012.20
CAediting_66555	ENST00000234831.8	chr1_54031123_-	-1932.00	-1932.40	-2012.20
CAediting_66556	ENST00000234831.8	chr1_54031127_-	-1934.50	-1932.40	-2012.20
CAediting_66557	ENST00000234831.8	chr1_54031151_-	-1931.70	-1932.40	-2012.20
CAediting_66558	ENST00000234831.8	chr1_54031168_-	-1932.80	-1932.40	-2012.20
CAediting_66653	ENST00000371344.4	chr1_54044637_-	-656.20	-656.60	-656.20
CAediting_66654	ENST00000371348.4	chr1_54047716_-	-488.80	-488.80	-503.70
CAediting_66655	ENST00000371348.4	chr1_54047717_-	-491.70	-488.80	-503.70
CAediting_66656	ENST00000371348.4	chr1_54047726_-	-489.80	-488.80	-503.70
CAediting_66657	ENST00000371348.4	chr1_54047774_-	-489.40	-488.80	-503.70
CAediting_66658	ENST00000371348.4	chr1_54047776_-	-491.10	-488.80	-503.70
CAediting_66659	ENST00000371348.4	chr1_54047829_-	-489.40	-488.80	-503.70
CAediting_66660	ENST00000371348.4	chr1_54047848_-	-488.70	-488.80	-503.70
CAediting_66661	ENST00000371348.4	chr1_54047853_-	-493.00	-488.80	-503.70
CAediting_66662	ENST00000371348.4	chr1_54047868_-	-491.10	-488.80	-503.70
CAediting_66663	ENST00000371348.4	chr1_54047884_-	-493.80	-488.80	-503.70
CAediting_66664	ENST00000371348.4	chr1_54047885_-	-490.70	-488.80	-503.70
CAediting_66665	ENST00000371348.4	chr1_54047911_-	-488.40	-488.80	-503.70
CAediting_66666	ENST00000371348.4	chr1_54047916_-	-489.00	-488.80	-503.70
CAediting_66667	ENST00000371348.4	chr1_54047932_-	-488.80	-488.80	-503.70
CAediting_66668	ENST00000371348.4	chr1_54047941_-	-491.40	-488.80	-503.70
CAediting_66669	ENST00000371348.4	chr1_54047954_-	-490.40	-488.80	-503.70

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Relation with ADAR for TMEM59

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_66477	chr1_54027524_-	3.06258191249932e-05	0.181898189147778	.	.	0.00693828553669271	0.118376198560263
CESC	CAediting_66477	chr1_54027524_-	0.0279671372510364	0.208661109087406	.	.	.	.
LUAD	CAediting_66477	chr1_54027524_-	0.00101563039405274	0.286044403868378	.	.	.	.
PRAD	CAediting_66477	chr1_54027524_-	0.0368239392007627	0.165727164538934	.	.	.	.
THCA	CAediting_66477	chr1_54027524_-	.	.	.	.	0.00155151345094965	0.270812727757519
KIRP	CAediting_66477	chr1_54027524_-	.	.	.	.	0.0158386020296148	0.285407646352295
PCPG	CAediting_66477	chr1_54027524_-	0.025511778777127	0.245129612999962	.	.	.	.
BRCA	CAediting_66480	chr1_54027534_-	0.0237537240981022	0.163576878744818	.	.	.	.
LIHC	CAediting_66480	chr1_54027534_-	0.0192761664234734	0.247678099426318	.	.	0.00644026927981866	0.2867564837221
BRCA	CAediting_66488	chr1_54027601_-	.	.	0.00212598149649887	0.382953551056565	.	.
BRCA	CAediting_66516	chr1_54030492_-	0.00112076091164867	0.275493624267885	.	.	.	.
STAD	CAediting_66527	chr1_54030539_-	0.0163617341675401	0.222511273331503	.	.	.	.
BRCA	CAediting_66532	chr1_54030566_-	0.00646860118135516	0.259330936297296	.	.	.	.
BRCA	CAediting_66540	chr1_54031018_-	0.00711129952170267	0.333336920484359	.	.	.	.
OV	CAediting_66541	chr1_54031022_-	0.00686241313187001	0.360468609803814	.	.	.	.

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Relation with cancer stages for TMEM59

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_66516	chr1_54030492_-	0.00879447541837462	0.226357832365344
ESCA	pathologic_stage	CAediting_66565	chr1_54032988_-	0.0327058923462249	0.305644003060417
KIRC	pathologic_stage	CAediting_66516	chr1_54030492_-	0.0460468030292442	0.166535611349412
KIRC	pathologic_stage	CAediting_66532	chr1_54030566_-	0.0278802525763122	0.203348829452369

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Relation with survival for TMEM59

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_66477	chr1_54027524_-	0.0013258840919077	0.000921252	6.42532e-07
OV	CAediting_66541	chr1_54031022_-	0.0215007219786514	0.0178608	165.347

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RelatedDrugs for TMEM59

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TMEM59

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene