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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SLC25A27 (CAeditome ID:9481)

Gene summary for SLC25A27

check button Gene summary
Gene informationGene symbol

SLC25A27

Gene ID

9481

Gene namesolute carrier family 25 member 27
SynonymsUCP4
Cytomap

6p12.3

Type of geneprotein-coding
Descriptionmitochondrial uncoupling protein 4UCP 4uncoupling protein 4
Modification date20210518
UniProtAcc

O95847

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
SLC25A27

GO:0005739

Mitochondrial uncoupling protein 4

0000052

SLC25A27

GO:0005739

Mitochondrial uncoupling protein 4

10025957

SLC25A27

GO:0031966

Mitochondrial uncoupling protein 4

10025957


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RNA A-to-I events for SLC25A27

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000153291.14
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_485845(46656200, +), CAediting_485846(46656210, +), CAediting_485847(46656231, +), CAediting_485848(46656236, +), CAediting_485849(46656245, +), CAediting_485850(46656250, +), CAediting_485851(46656255, +), CAediting_485852(46656260, +), CAediting_485853(46656274, +), CAediting_485854(46656281, +), CAediting_485855(46656298, +), CAediting_485856(46656320, +), CAediting_485857(46656367, +), CAediting_485858(46656389, +), CAediting_485859(46656396, +), CAediting_485860(46656399, +), CAediting_485861(46656410, +), CAediting_485862(46656420, +), CAediting_485863(46656425, +), CAediting_485864(46656426, +), CAediting_485865(46656440, +), CAediting_485866(46656445, +), CAediting_485867(46656446, +), CAediting_485868(46656450, +), CAediting_485869(46656463, +), CAediting_485870(46656475, +), CAediting_485871(46656479, +), CAediting_485872(46656485, +), CAediting_485873(46656502, +), CAediting_485874(46656511, +), CAediting_485875(46656512, +), CAediting_485876(46656520, +), CAediting_485877(46656526, +), CAediting_485878(46656529, +), CAediting_485879(46656531, +), CAediting_485880(46656543, +), CAediting_485881(46656557, +), CAediting_485882(46656560, +), CAediting_485883(46656566, +), CAediting_485884(46656599, +), CAediting_485885(46656602, +), CAediting_485886(46656616, +), CAediting_485887(46656621, +), CAediting_485888(46656628, +), CAediting_485889(46656639, +), CAediting_485890(46656640, +), CAediting_485891(46656680, +), CAediting_485892(46656681, +), CAediting_485893(46656693, +), CAediting_485894(46656695, +), CAediting_485895(46656888, +), CAediting_485896(46656894, +), CAediting_485897(46656902, +), CAediting_485898(46656910, +), CAediting_485899(46656911, +), CAediting_485900(46656916, +), CAediting_485901(46656927, +), CAediting_485902(46656928, +), CAediting_485903(46656933, +), CAediting_485904(46656951, +), CAediting_485905(46656956, +), CAediting_485906(46656965, +), CAediting_485907(46656970, +), CAediting_485908(46656976, +), CAediting_485909(46656980, +), CAediting_485910(46656982, +), CAediting_485911(46656987, +), CAediting_485912(46656988, +), CAediting_485913(46657001, +), CAediting_485914(46657004, +), CAediting_485915(46657005, +), CAediting_485916(46657011, +), CAediting_485917(46657015, +), CAediting_485918(46657016, +), CAediting_485919(46657019, +), CAediting_485920(46657023, +), CAediting_485921(46657035, +), CAediting_485922(46657040, +), CAediting_485923(46657045, +), CAediting_485924(46657052, +), CAediting_485925(46657055, +), CAediting_485926(46657062, +), CAediting_485927(46657068, +), CAediting_485928(46657076, +), CAediting_485929(46657078, +), CAediting_485930(46657080, +), CAediting_485931(46657086, +), CAediting_485932(46657087, +), CAediting_485933(46657091, +), CAediting_485934(46657099, +), CAediting_485935(46657100, +), CAediting_485936(46657118, +), CAediting_485937(46657126, +), CAediting_485938(46657136, +), CAediting_485939(46657146, +), CAediting_485940(46657148, +), CAediting_485941(46657149, +), CAediting_485942(46657150, +), CAediting_485943(46657154, +), CAediting_485944(46657167, +), CAediting_485945(46657168, +), CAediting_485946(46657200, +), CAediting_485947(46657202, +), CAediting_485948(46657206, +), CAediting_485949(46657208, +), CAediting_485950(46657209, +), CAediting_485951(46657243, +), CAediting_485952(46657247, +), CAediting_485953(46657248, +), CAediting_485954(46657262, +), CAediting_485955(46657267, +), CAediting_485956(46657277, +), CAediting_485957(46657279, +), CAediting_485958(46657286, +), CAediting_485959(46657298, +), CAediting_485960(46657301, +), CAediting_485961(46657302, +), CAediting_485962(46657303, +), CAediting_485963(46657304, +), CAediting_485964(46657305, +), CAediting_485965(46657316, +), CAediting_485966(46657326, +), CAediting_485967(46657342, +), CAediting_485968(46657343, +), CAediting_485969(46657348, +), CAediting_485970(46657352, +), CAediting_485971(46657356, +), CAediting_485972(46657357, +), CAediting_485973(46657365, +), CAediting_485974(46657373, +), CAediting_485975(46657374, +), CAediting_485976(46657375, +), CAediting_485977(46657384, +), CAediting_485978(46657391, +), CAediting_485979(46657395, +), CAediting_485980(46657404, +), CAediting_485981(46657413, +), CAediting_485982(46657428, +), CAediting_485983(46657434, +), CAediting_485984(46657448, +), CAediting_485985(46657452, +), CAediting_485986(46657453, +), CAediting_485987(46663715, +),

Top

RNA editing positional annotations for SLC25A27 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_485845chr6_46656200_+intronic
CAediting_485846chr6_46656210_+intronic
CAediting_485847chr6_46656231_+intronic
CAediting_485848chr6_46656236_+intronic
CAediting_485849chr6_46656245_+intronic
CAediting_485850chr6_46656250_+intronic
CAediting_485851chr6_46656255_+intronic
CAediting_485852chr6_46656260_+intronic
CAediting_485853chr6_46656274_+intronic
CAediting_485854chr6_46656281_+intronic
CAediting_485855chr6_46656298_+intronic
CAediting_485856chr6_46656320_+intronic
CAediting_485857chr6_46656367_+intronic
CAediting_485858chr6_46656389_+intronic
CAediting_485859chr6_46656396_+intronic
CAediting_485860chr6_46656399_+intronic
CAediting_485861chr6_46656410_+intronic
CAediting_485862chr6_46656420_+intronic
CAediting_485863chr6_46656425_+intronic
CAediting_485864chr6_46656426_+intronic
CAediting_485865chr6_46656440_+intronic
CAediting_485866chr6_46656445_+intronic
CAediting_485867chr6_46656446_+intronic
CAediting_485868chr6_46656450_+intronic
CAediting_485869chr6_46656463_+intronic
CAediting_485870chr6_46656475_+intronic
CAediting_485871chr6_46656479_+intronic
CAediting_485872chr6_46656485_+intronic
CAediting_485873chr6_46656502_+intronic
CAediting_485874chr6_46656511_+intronic
CAediting_485875chr6_46656512_+intronic
CAediting_485876chr6_46656520_+intronic
CAediting_485877chr6_46656526_+intronic
CAediting_485878chr6_46656529_+intronic
CAediting_485879chr6_46656531_+intronic
CAediting_485880chr6_46656543_+intronic
CAediting_485881chr6_46656557_+intronic
CAediting_485882chr6_46656560_+intronic
CAediting_485883chr6_46656566_+intronic
CAediting_485884chr6_46656599_+intronic
CAediting_485885chr6_46656602_+intronic
CAediting_485886chr6_46656616_+intronic
CAediting_485887chr6_46656621_+intronic
CAediting_485888chr6_46656628_+intronic
CAediting_485889chr6_46656639_+intronic
CAediting_485890chr6_46656640_+intronic
CAediting_485891chr6_46656680_+intronic
CAediting_485892chr6_46656681_+intronic
CAediting_485893chr6_46656693_+intronic
CAediting_485894chr6_46656695_+intronic
CAediting_485895chr6_46656888_+intronic
CAediting_485896chr6_46656894_+intronic
CAediting_485897chr6_46656902_+intronic
CAediting_485898chr6_46656910_+intronic
CAediting_485899chr6_46656911_+intronic
CAediting_485900chr6_46656916_+intronic
CAediting_485901chr6_46656927_+intronic
CAediting_485902chr6_46656928_+intronic
CAediting_485903chr6_46656933_+intronic
CAediting_485904chr6_46656951_+intronic
CAediting_485905chr6_46656956_+intronic
CAediting_485906chr6_46656965_+intronic
CAediting_485907chr6_46656970_+intronic
CAediting_485908chr6_46656976_+intronic
CAediting_485909chr6_46656980_+intronic
CAediting_485910chr6_46656982_+intronic
CAediting_485911chr6_46656987_+intronic
CAediting_485912chr6_46656988_+intronic
CAediting_485913chr6_46657001_+intronic
CAediting_485914chr6_46657004_+intronic
CAediting_485915chr6_46657005_+intronic
CAediting_485916chr6_46657011_+intronic
CAediting_485917chr6_46657015_+intronic
CAediting_485918chr6_46657016_+intronic
CAediting_485919chr6_46657019_+intronic
CAediting_485920chr6_46657023_+intronic
CAediting_485921chr6_46657035_+intronic
CAediting_485922chr6_46657040_+intronic
CAediting_485923chr6_46657045_+intronic
CAediting_485924chr6_46657052_+intronic
CAediting_485925chr6_46657055_+intronic
CAediting_485926chr6_46657062_+intronic
CAediting_485927chr6_46657068_+intronic
CAediting_485928chr6_46657076_+intronic
CAediting_485929chr6_46657078_+intronic
CAediting_485930chr6_46657080_+intronic
CAediting_485931chr6_46657086_+intronic
CAediting_485932chr6_46657087_+intronic
CAediting_485933chr6_46657091_+intronic
CAediting_485934chr6_46657099_+intronic
CAediting_485935chr6_46657100_+intronic
CAediting_485936chr6_46657118_+intronic
CAediting_485937chr6_46657126_+intronic
CAediting_485938chr6_46657136_+intronic
CAediting_485939chr6_46657146_+intronic
CAediting_485940chr6_46657148_+intronic
CAediting_485941chr6_46657149_+intronic
CAediting_485942chr6_46657150_+intronic
CAediting_485943chr6_46657154_+intronic
CAediting_485944chr6_46657167_+intronic
CAediting_485945chr6_46657168_+intronic
CAediting_485946chr6_46657200_+intronic
CAediting_485947chr6_46657202_+intronic
CAediting_485948chr6_46657206_+intronic
CAediting_485949chr6_46657208_+intronic
CAediting_485950chr6_46657209_+intronic
CAediting_485951chr6_46657243_+intronic
CAediting_485952chr6_46657247_+intronic
CAediting_485953chr6_46657248_+intronic
CAediting_485954chr6_46657262_+intronic
CAediting_485955chr6_46657267_+intronic
CAediting_485956chr6_46657277_+intronic
CAediting_485957chr6_46657279_+intronic
CAediting_485958chr6_46657286_+intronic
CAediting_485959chr6_46657298_+intronic
CAediting_485960chr6_46657301_+intronic
CAediting_485961chr6_46657302_+intronic
CAediting_485962chr6_46657303_+intronic
CAediting_485963chr6_46657304_+intronic
CAediting_485964chr6_46657305_+intronic
CAediting_485965chr6_46657316_+intronic
CAediting_485966chr6_46657326_+intronic
CAediting_485967chr6_46657342_+intronic
CAediting_485968chr6_46657343_+intronic
CAediting_485969chr6_46657348_+intronic
CAediting_485970chr6_46657352_+intronic
CAediting_485971chr6_46657356_+intronic
CAediting_485972chr6_46657357_+intronic
CAediting_485973chr6_46657365_+intronic
CAediting_485974chr6_46657373_+intronic
CAediting_485975chr6_46657374_+intronic
CAediting_485976chr6_46657375_+intronic
CAediting_485977chr6_46657384_+intronic
CAediting_485978chr6_46657391_+intronic
CAediting_485979chr6_46657395_+intronic
CAediting_485980chr6_46657404_+intronic
CAediting_485981chr6_46657413_+intronic
CAediting_485982chr6_46657428_+intronic
CAediting_485983chr6_46657434_+intronic
CAediting_485984chr6_46657448_+intronic
CAediting_485985chr6_46657452_+intronic
CAediting_485986chr6_46657453_+intronic
CAediting_485987chr6_46663715_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_485845chr6_46656200_+SINEAluAluSx
CAediting_485846chr6_46656210_+SINEAluAluSx
CAediting_485847chr6_46656231_+SINEAluAluSx
CAediting_485848chr6_46656236_+SINEAluAluSx
CAediting_485849chr6_46656245_+SINEAluAluSx
CAediting_485850chr6_46656250_+SINEAluAluSx
CAediting_485851chr6_46656255_+SINEAluAluSx
CAediting_485852chr6_46656260_+SINEAluAluSx
CAediting_485853chr6_46656274_+SINEAluAluSx
CAediting_485854chr6_46656281_+SINEAluAluSx
CAediting_485855chr6_46656298_+SINEAluAluSx
CAediting_485856chr6_46656320_+SINEAluAluSx
CAediting_485857chr6_46656367_+SINEAluAluSx
CAediting_485858chr6_46656389_+SINEAluAluSx
CAediting_485859chr6_46656396_+SINEAluAluSx
CAediting_485860chr6_46656399_+SINEAluAluSx
CAediting_485861chr6_46656410_+SINEAluAluSx
CAediting_485862chr6_46656420_+SINEAluAluSx
CAediting_485863chr6_46656425_+SINEAluAluSx
CAediting_485864chr6_46656426_+SINEAluAluSx
CAediting_485865chr6_46656440_+SINEAluAluSx
CAediting_485866chr6_46656445_+SINEAluAluSx
CAediting_485867chr6_46656446_+SINEAluAluSx
CAediting_485868chr6_46656450_+SINEAluAluSx
CAediting_485869chr6_46656463_+SINEAluAluSx
CAediting_485870chr6_46656475_+SINEAluAluSx
CAediting_485871chr6_46656479_+SINEAluAluSx
CAediting_485872chr6_46656485_+SINEAluAluSx
CAediting_485873chr6_46656502_+SINEAluAluSx
CAediting_485874chr6_46656511_+SINEAluAluSx
CAediting_485875chr6_46656512_+SINEAluAluSx
CAediting_485876chr6_46656520_+SINEAluAluSx
CAediting_485877chr6_46656526_+SINEAluAluSx
CAediting_485878chr6_46656529_+SINEAluAluSx
CAediting_485879chr6_46656531_+SINEAluAluSx
CAediting_485880chr6_46656543_+SINEAluAluSx
CAediting_485881chr6_46656557_+SINEAluAluSx
CAediting_485882chr6_46656560_+SINEAluAluSx
CAediting_485883chr6_46656566_+SINEAluAluSx
CAediting_485884chr6_46656599_+SINEAluAluSx
CAediting_485885chr6_46656602_+SINEAluAluSx
CAediting_485886chr6_46656616_+SINEAluAluSx
CAediting_485887chr6_46656621_+SINEAluAluSx
CAediting_485888chr6_46656628_+SINEAluAluSx
CAediting_485889chr6_46656639_+SINEAluAluSx
CAediting_485890chr6_46656640_+SINEAluAluSx
CAediting_485891chr6_46656680_+SINEAluAluSx
CAediting_485892chr6_46656681_+SINEAluAluSx
CAediting_485893chr6_46656693_+SINEAluAluSx
CAediting_485894chr6_46656695_+SINEAluAluSx
CAediting_485895chr6_46656888_+SINEAluAluJo
CAediting_485896chr6_46656894_+SINEAluAluJo
CAediting_485897chr6_46656902_+SINEAluAluJo
CAediting_485898chr6_46656910_+SINEAluAluJo
CAediting_485899chr6_46656911_+SINEAluAluJo
CAediting_485900chr6_46656916_+SINEAluAluJo
CAediting_485901chr6_46656927_+SINEAluAluJo
CAediting_485902chr6_46656928_+SINEAluAluJo
CAediting_485903chr6_46656933_+SINEAluAluJo
CAediting_485904chr6_46656951_+SINEAluAluJo
CAediting_485905chr6_46656956_+SINEAluAluJo
CAediting_485906chr6_46656965_+SINEAluAluJo
CAediting_485907chr6_46656970_+SINEAluAluJo
CAediting_485908chr6_46656976_+SINEAluAluJo
CAediting_485909chr6_46656980_+SINEAluAluJo
CAediting_485910chr6_46656982_+SINEAluAluJo
CAediting_485911chr6_46656987_+SINEAluAluJo
CAediting_485912chr6_46656988_+SINEAluAluJo
CAediting_485913chr6_46657001_+SINEAluAluJo
CAediting_485914chr6_46657004_+SINEAluAluJo
CAediting_485915chr6_46657005_+SINEAluAluJo
CAediting_485916chr6_46657011_+SINEAluAluJo
CAediting_485917chr6_46657015_+SINEAluAluJo
CAediting_485918chr6_46657016_+SINEAluAluJo
CAediting_485919chr6_46657019_+SINEAluAluJo
CAediting_485920chr6_46657023_+SINEAluAluJo
CAediting_485921chr6_46657035_+SINEAluAluJo
CAediting_485922chr6_46657040_+SINEAluAluJo
CAediting_485923chr6_46657045_+SINEAluAluJo
CAediting_485924chr6_46657052_+SINEAluAluJo
CAediting_485925chr6_46657055_+SINEAluAluJo
CAediting_485926chr6_46657062_+SINEAluAluJo
CAediting_485927chr6_46657068_+SINEAluAluJo
CAediting_485928chr6_46657076_+SINEAluAluJo
CAediting_485929chr6_46657078_+SINEAluAluJo
CAediting_485930chr6_46657080_+SINEAluAluJo
CAediting_485931chr6_46657086_+SINEAluAluJo
CAediting_485932chr6_46657087_+SINEAluAluJo
CAediting_485933chr6_46657091_+SINEAluAluJo
CAediting_485934chr6_46657099_+SINEAluAluJo
CAediting_485935chr6_46657100_+SINEAluAluJo
CAediting_485936chr6_46657118_+SINEAluAluJo
CAediting_485937chr6_46657126_+SINEAluAluJo
CAediting_485938chr6_46657136_+SINEAluAluJo
CAediting_485939chr6_46657146_+SINEAluAluJo
CAediting_485940chr6_46657148_+SINEAluAluJo
CAediting_485941chr6_46657149_+SINEAluAluJo
CAediting_485942chr6_46657150_+SINEAluAluJo
CAediting_485943chr6_46657154_+SINEAluAluJo
CAediting_485944chr6_46657167_+SINEAluAluJo
CAediting_485945chr6_46657168_+SINEAluAluJo
CAediting_485946chr6_46657200_+SINEAluAluSq2
CAediting_485947chr6_46657202_+SINEAluAluSq2
CAediting_485948chr6_46657206_+SINEAluAluSq2
CAediting_485949chr6_46657208_+SINEAluAluSq2
CAediting_485950chr6_46657209_+SINEAluAluSq2
CAediting_485951chr6_46657243_+SINEAluAluSq2
CAediting_485952chr6_46657247_+SINEAluAluSq2
CAediting_485953chr6_46657248_+SINEAluAluSq2
CAediting_485954chr6_46657262_+SINEAluAluSq2
CAediting_485955chr6_46657267_+SINEAluAluSq2
CAediting_485956chr6_46657277_+SINEAluAluSq2
CAediting_485957chr6_46657279_+SINEAluAluSq2
CAediting_485958chr6_46657286_+SINEAluAluSq2
CAediting_485959chr6_46657298_+SINEAluAluSq2
CAediting_485960chr6_46657301_+SINEAluAluSq2
CAediting_485961chr6_46657302_+SINEAluAluSq2
CAediting_485962chr6_46657303_+SINEAluAluSq2
CAediting_485963chr6_46657304_+SINEAluAluSq2
CAediting_485964chr6_46657305_+SINEAluAluSq2
CAediting_485965chr6_46657316_+SINEAluAluSq2
CAediting_485966chr6_46657326_+SINEAluAluSq2
CAediting_485967chr6_46657342_+SINEAluAluSq2
CAediting_485968chr6_46657343_+SINEAluAluSq2
CAediting_485969chr6_46657348_+SINEAluAluSq2
CAediting_485970chr6_46657352_+SINEAluAluSq2
CAediting_485971chr6_46657356_+SINEAluAluSq2
CAediting_485972chr6_46657357_+SINEAluAluSq2
CAediting_485973chr6_46657365_+SINEAluAluSq2
CAediting_485974chr6_46657373_+SINEAluAluSq2
CAediting_485975chr6_46657374_+SINEAluAluSq2
CAediting_485976chr6_46657375_+SINEAluAluSq2
CAediting_485977chr6_46657384_+SINEAluAluSq2
CAediting_485978chr6_46657391_+SINEAluAluSq2
CAediting_485979chr6_46657395_+SINEAluAluSq2
CAediting_485980chr6_46657404_+SINEAluAluSq2
CAediting_485981chr6_46657413_+SINEAluAluSq2
CAediting_485982chr6_46657428_+SINEAluAluSq2
CAediting_485983chr6_46657434_+SINEAluAluSq2
CAediting_485984chr6_46657448_+SINEAluAluSq2
CAediting_485985chr6_46657452_+SINEAluAluSq2
CAediting_485986chr6_46657453_+SINEAluAluSq2

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RNA A-to-I editing events in the alternative splicing sites for SLC25A27

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000153291.14.SLC25A27.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000153291.14.SLC25A27.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC25A27

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LUAD.CAediting_485933.ENSG00000153291.SLC25A27.png
Soverview
PRAD.CAediting_485920.ENSG00000153291.SLC25A27.png
Soverview
PRAD.CAediting_485933.ENSG00000153291.SLC25A27.png
Soverview

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Protein coding region RNA A-to-I editings for SLC25A27

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SLC25A27

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000153291.14ENST00000411689hsa-miR-605-3p46677104466771107mer-m84667709046677111156-23.02
CAediting_393chr1_1167164_+ENSG00000153291.14ENST00000411689hsa-miR-200b-3p46676809466768157mer-m84667679546676816147-18.25
CAediting_393chr1_1167164_+ENSG00000153291.14ENST00000604127hsa-miR-200b-3p46676689466766957mer-m84667667546676696145-12.45
CAediting_393chr1_1167164_+ENSG00000153291.14ENST00000604616hsa-miR-200b-3p46676809466768157mer-m84667679546676816147-18.25
CAediting_393chr1_1167164_+ENSG00000153291.14ENST00000604616hsa-miR-200b-3p46676689466766957mer-m84667667546676696145-12.45
CAediting_1306323chr19_13836462_-ENSG00000153291.14ENST00000411689hsa-miR-27a-3p46678182466781898mer-1a4667817146678189150-15.24
CAediting_1351755chr19_40282625_-ENSG00000153291.14ENST00000411689hsa-miR-64146677569466775757mer-m84667755046677576149-14.93

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000153291.14ENST00000411689hsa-miR-200b-3p46676892466768987mer-m84667688046676899147-9.11
CAediting_393chr1_1167164_+ENSG00000153291.14ENST00000604616hsa-miR-200b-3p46676892466768987mer-m84667688046676899147-9.11

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SLC25A27

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SLC25A27

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LGGCAediting_485923chr6_46657045_+....0.01064492500120520.285895658115408
PRADCAediting_485933chr6_46657091_+..0.007155653338846160.209921840076883..
KIRPCAediting_485933chr6_46657091_+..0.001114580257833890.428031406544313..
OVCAediting_485933chr6_46657091_+0.006993051466070480.331460443706762....
SKCMCAediting_485933chr6_46657091_+..0.001596161056633720.347329491360736..
PRADCAediting_485947chr6_46657202_+0.02649352052520330.170193989777544....
THCACAediting_485947chr6_46657202_+0.03995232576248680.175107918477313....
LGGCAediting_485948chr6_46657206_+..0.007362405301304740.215873978344989..
THCACAediting_485948chr6_46657206_+..0.002790721723660660.279986356801756..
KIRPCAediting_485948chr6_46657206_+..8.68245894477381e-050.508379209046029..
SKCMCAediting_485948chr6_46657206_+..0.0005642114989093070.381706691195952..

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Relation with cancer stages for SLC25A27

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KIRCpathologic_stageCAediting_485926chr6_46657062_+0.04384377324195150.286290232068763
SKCMpathologic_stageCAediting_485923chr6_46657045_+0.000628707232193662-0.454517074158386
THCApathologic_stageCAediting_485923chr6_46657045_+0.0291285422644738-0.284233538377765

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Relation with survival for SLC25A27

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
OVCAediting_485923chr6_46657045_+0.02192305916633930.044396223.9324
OVCAediting_485933chr6_46657091_+0.02438993872391990.011343913.6144

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RelatedDrugs for SLC25A27

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SLC25A27

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
SLC25A27C0036341Schizophrenia2PSYGENET