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Editing gene: ARHGAP29 (CAeditome ID:9411)

Gene summary for ARHGAP29

Gene summary

Gene information	Gene symbol	ARHGAP29
	Gene ID	9411
	Gene name	Rho GTPase activating protein 29
	Synonyms	PARG1
	Cytomap	1p22.1
	Type of gene	protein-coding
	Description	rho GTPase-activating protein 29PTPL1-associated RhoGAP 1 (PARG1)PTPL1-associated RhoGAP protein 1rho-type GTPase-activating protein 29
	Modification date	20210518
	UniProtAcc	Q52LW3
	Context	- 33291460(Influence of ARHGAP29 on the Invasion of Mesenchymal-Transformed Breast Cancer Cells)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ARHGAP29	GO:0030165	Rho GTPase-activating protein 29	23209302
ARHGAP29	GO:0005737	Rho GTPase-activating protein 29	25468996
ARHGAP29	GO:0032991	Rho GTPase-activating protein 29	26780829

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RNA A-to-I events for ARHGAP29

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000137962.11

RNA A-to-I editing events in Cancer.

CAediting_82267(94162294, -), CAediting_82268(94162375, -), CAediting_82269(94162376, -), CAediting_82270(94162407, -), CAediting_82271(94162417, -), CAediting_82272(94162474, -), CAediting_82273(94162505, -), CAediting_82274(94162551, -), CAediting_82275(94162552, -), CAediting_82276(94162554, -), CAediting_82277(94167317, -), CAediting_82278(94167326, -), CAediting_82279(94167329, -), CAediting_82280(94167338, -), CAediting_82281(94167339, -), CAediting_82282(94167340, -), CAediting_82283(94167391, -), CAediting_82284(94167400, -), CAediting_82285(94167403, -), CAediting_82286(94167410, -), CAediting_82287(94167411, -), CAediting_82288(94167413, -), CAediting_82289(94167415, -), CAediting_82290(94167417, -), CAediting_82291(94167420, -), CAediting_82292(94167426, -), CAediting_82293(94167434, -), CAediting_82294(94167435, -), CAediting_82295(94167442, -), CAediting_82296(94167444, -), CAediting_82297(94167447, -), CAediting_82298(94167458, -), CAediting_82299(94167460, -), CAediting_82300(94167473, -), CAediting_82301(94167482, -), CAediting_82302(94167499, -), CAediting_82303(94167500, -), CAediting_82304(94167525, -), CAediting_82305(94167544, -), CAediting_82306(94167560, -), CAediting_82307(94167574, -), CAediting_82308(94167575, -), CAediting_82309(94167578, -), CAediting_82310(94167905, -), CAediting_82311(94168405, -), CAediting_82312(94168430, -), CAediting_82313(94168432, -), CAediting_82314(94168446, -), CAediting_82315(94168455, -), CAediting_82316(94168466, -), CAediting_82317(94168467, -), CAediting_82318(94168475, -), CAediting_82319(94168478, -), CAediting_82320(94168481, -), CAediting_82321(94168485, -), CAediting_82322(94168491, -), CAediting_82323(94168494, -), CAediting_82324(94168502, -), CAediting_82325(94168507, -), CAediting_82326(94168521, -), CAediting_82327(94168524, -), CAediting_82328(94168530, -), CAediting_82329(94168534, -), CAediting_82330(94168540, -), CAediting_82331(94168548, -), CAediting_82332(94168549, -), CAediting_82333(94168552, -), CAediting_82334(94168563, -), CAediting_82335(94168564, -), CAediting_82336(94168565, -), CAediting_82337(94168571, -), CAediting_82338(94168573, -), CAediting_82339(94168577, -), CAediting_82340(94168588, -), CAediting_82341(94168594, -), CAediting_82342(94168619, -), CAediting_82343(94168632, -), CAediting_82344(94168635, -), CAediting_82345(94168640, -), CAediting_82346(94168641, -), CAediting_82347(94168649, -), CAediting_82348(94206640, -), CAediting_82349(94206734, -), CAediting_82350(94206747, -), CAediting_82351(94206748, -), CAediting_82352(94206788, -), CAediting_82353(94206820, -), CAediting_82354(94207147, -), CAediting_82355(94207188, -), CAediting_82356(94207236, -), CAediting_82357(94207258, -), CAediting_82358(94207990, -), CAediting_82359(94208009, -), CAediting_82360(94208113, -), CAediting_82361(94208182, -), CAediting_82362(94208193, -), CAediting_82363(94217808, -), CAediting_82364(94238166, -), CAediting_82365(94238169, -), CAediting_82366(94238185, -), CAediting_82367(94238198, -), CAediting_82368(94238201, -), CAediting_82369(94238212, -), CAediting_82370(94238234, -), CAediting_82371(94238236, -), CAediting_82372(94238237, -), CAediting_82373(94238239, -), CAediting_82374(94238240, -), CAediting_82375(94238243, -), CAediting_82376(94238254, -), CAediting_82377(94238260, -), CAediting_82378(94238264, -), CAediting_82379(94249720, -),

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RNA editing positional annotations for ARHGAP29 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_82267	chr1_94162294_-	intronic
CAediting_82268	chr1_94162375_-	intronic
CAediting_82269	chr1_94162376_-	intronic
CAediting_82270	chr1_94162407_-	intronic
CAediting_82271	chr1_94162417_-	intronic
CAediting_82272	chr1_94162474_-	intronic
CAediting_82273	chr1_94162505_-	intronic
CAediting_82274	chr1_94162551_-	intronic
CAediting_82275	chr1_94162552_-	intronic
CAediting_82276	chr1_94162554_-	intronic
CAediting_82277	chr1_94167317_-	intronic
CAediting_82278	chr1_94167326_-	intronic
CAediting_82279	chr1_94167329_-	intronic
CAediting_82280	chr1_94167338_-	intronic
CAediting_82281	chr1_94167339_-	intronic
CAediting_82282	chr1_94167340_-	intronic
CAediting_82283	chr1_94167391_-	intronic
CAediting_82284	chr1_94167400_-	intronic
CAediting_82285	chr1_94167403_-	intronic
CAediting_82286	chr1_94167410_-	intronic
CAediting_82287	chr1_94167411_-	intronic
CAediting_82288	chr1_94167413_-	intronic
CAediting_82289	chr1_94167415_-	intronic
CAediting_82290	chr1_94167417_-	intronic
CAediting_82291	chr1_94167420_-	intronic
CAediting_82292	chr1_94167426_-	intronic
CAediting_82293	chr1_94167434_-	intronic
CAediting_82294	chr1_94167435_-	intronic
CAediting_82295	chr1_94167442_-	intronic
CAediting_82296	chr1_94167444_-	intronic
CAediting_82297	chr1_94167447_-	intronic
CAediting_82298	chr1_94167458_-	intronic
CAediting_82299	chr1_94167460_-	intronic
CAediting_82300	chr1_94167473_-	intronic
CAediting_82301	chr1_94167482_-	intronic
CAediting_82302	chr1_94167499_-	intronic
CAediting_82303	chr1_94167500_-	intronic
CAediting_82304	chr1_94167525_-	intronic
CAediting_82305	chr1_94167544_-	intronic
CAediting_82306	chr1_94167560_-	intronic
CAediting_82307	chr1_94167574_-	intronic
CAediting_82308	chr1_94167575_-	intronic
CAediting_82309	chr1_94167578_-	intronic
CAediting_82310	chr1_94167905_-	intronic
CAediting_82311	chr1_94168405_-	intronic
CAediting_82312	chr1_94168430_-	intronic
CAediting_82313	chr1_94168432_-	intronic
CAediting_82314	chr1_94168446_-	intronic
CAediting_82315	chr1_94168455_-	intronic
CAediting_82316	chr1_94168466_-	intronic
CAediting_82317	chr1_94168467_-	intronic
CAediting_82318	chr1_94168475_-	intronic
CAediting_82319	chr1_94168478_-	intronic
CAediting_82320	chr1_94168481_-	intronic
CAediting_82321	chr1_94168485_-	intronic
CAediting_82322	chr1_94168491_-	intronic
CAediting_82323	chr1_94168494_-	intronic
CAediting_82324	chr1_94168502_-	intronic
CAediting_82325	chr1_94168507_-	intronic
CAediting_82326	chr1_94168521_-	intronic
CAediting_82327	chr1_94168524_-	intronic
CAediting_82328	chr1_94168530_-	intronic
CAediting_82329	chr1_94168534_-	intronic
CAediting_82330	chr1_94168540_-	intronic
CAediting_82331	chr1_94168548_-	intronic
CAediting_82332	chr1_94168549_-	intronic
CAediting_82333	chr1_94168552_-	intronic
CAediting_82334	chr1_94168563_-	intronic
CAediting_82335	chr1_94168564_-	intronic
CAediting_82336	chr1_94168565_-	intronic
CAediting_82337	chr1_94168571_-	intronic
CAediting_82338	chr1_94168573_-	intronic
CAediting_82339	chr1_94168577_-	intronic
CAediting_82340	chr1_94168588_-	intronic
CAediting_82341	chr1_94168594_-	intronic
CAediting_82342	chr1_94168619_-	intronic
CAediting_82343	chr1_94168632_-	intronic
CAediting_82344	chr1_94168635_-	intronic
CAediting_82345	chr1_94168640_-	intronic
CAediting_82346	chr1_94168641_-	intronic
CAediting_82347	chr1_94168649_-	intronic
CAediting_82348	chr1_94206640_-	intronic
CAediting_82349	chr1_94206734_-	intronic
CAediting_82350	chr1_94206747_-	intronic
CAediting_82351	chr1_94206748_-	intronic
CAediting_82352	chr1_94206788_-	intronic
CAediting_82353	chr1_94206820_-	intronic
CAediting_82354	chr1_94207147_-	intronic
CAediting_82355	chr1_94207188_-	intronic
CAediting_82356	chr1_94207236_-	intronic
CAediting_82357	chr1_94207258_-	intronic
CAediting_82358	chr1_94207990_-	intronic
CAediting_82359	chr1_94208009_-	intronic
CAediting_82360	chr1_94208113_-	intronic
CAediting_82361	chr1_94208182_-	intronic
CAediting_82362	chr1_94208193_-	intronic
CAediting_82363	chr1_94217808_-	intronic
CAediting_82364	chr1_94238166_-	intronic
CAediting_82365	chr1_94238169_-	intronic
CAediting_82366	chr1_94238185_-	intronic
CAediting_82367	chr1_94238198_-	intronic
CAediting_82368	chr1_94238201_-	intronic
CAediting_82369	chr1_94238212_-	intronic
CAediting_82370	chr1_94238234_-	intronic
CAediting_82371	chr1_94238236_-	intronic
CAediting_82372	chr1_94238237_-	intronic
CAediting_82373	chr1_94238239_-	intronic
CAediting_82374	chr1_94238240_-	intronic
CAediting_82375	chr1_94238243_-	intronic
CAediting_82376	chr1_94238254_-	intronic
CAediting_82377	chr1_94238260_-	intronic
CAediting_82378	chr1_94238264_-	intronic
CAediting_82379	chr1_94249720_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_82267	chr1_94162294_-	SINE	Alu	AluY
CAediting_82268	chr1_94162375_-	SINE	Alu	AluY
CAediting_82269	chr1_94162376_-	SINE	Alu	AluY
CAediting_82270	chr1_94162407_-	SINE	Alu	AluY
CAediting_82271	chr1_94162417_-	SINE	Alu	AluY
CAediting_82272	chr1_94162474_-	SINE	Alu	AluY
CAediting_82273	chr1_94162505_-	SINE	Alu	AluY
CAediting_82274	chr1_94162551_-	SINE	Alu	AluY
CAediting_82275	chr1_94162552_-	SINE	Alu	AluY
CAediting_82276	chr1_94162554_-	SINE	Alu	AluY
CAediting_82277	chr1_94167317_-	SINE	Alu	AluSz
CAediting_82278	chr1_94167326_-	SINE	Alu	AluSz
CAediting_82279	chr1_94167329_-	SINE	Alu	AluSz
CAediting_82280	chr1_94167338_-	SINE	Alu	AluSz
CAediting_82281	chr1_94167339_-	SINE	Alu	AluSz
CAediting_82282	chr1_94167340_-	SINE	Alu	AluSz
CAediting_82283	chr1_94167391_-	SINE	Alu	AluSz
CAediting_82284	chr1_94167400_-	SINE	Alu	AluSz
CAediting_82285	chr1_94167403_-	SINE	Alu	AluSz
CAediting_82286	chr1_94167410_-	SINE	Alu	AluSz
CAediting_82287	chr1_94167411_-	SINE	Alu	AluSz
CAediting_82288	chr1_94167413_-	SINE	Alu	AluSz
CAediting_82289	chr1_94167415_-	SINE	Alu	AluSz
CAediting_82290	chr1_94167417_-	SINE	Alu	AluSz
CAediting_82291	chr1_94167420_-	SINE	Alu	AluSz
CAediting_82292	chr1_94167426_-	SINE	Alu	AluSz
CAediting_82293	chr1_94167434_-	SINE	Alu	AluSz
CAediting_82294	chr1_94167435_-	SINE	Alu	AluSz
CAediting_82295	chr1_94167442_-	SINE	Alu	AluSz
CAediting_82296	chr1_94167444_-	SINE	Alu	AluSz
CAediting_82297	chr1_94167447_-	SINE	Alu	AluSz
CAediting_82298	chr1_94167458_-	SINE	Alu	AluSz
CAediting_82299	chr1_94167460_-	SINE	Alu	AluSz
CAediting_82300	chr1_94167473_-	SINE	Alu	AluSz
CAediting_82301	chr1_94167482_-	SINE	Alu	AluSz
CAediting_82302	chr1_94167499_-	SINE	Alu	AluSz
CAediting_82303	chr1_94167500_-	SINE	Alu	AluSz
CAediting_82304	chr1_94167525_-	SINE	Alu	AluSz
CAediting_82305	chr1_94167544_-	SINE	Alu	AluSz
CAediting_82306	chr1_94167560_-	SINE	Alu	AluSz
CAediting_82307	chr1_94167574_-	SINE	Alu	AluSz
CAediting_82308	chr1_94167575_-	SINE	Alu	AluSz
CAediting_82309	chr1_94167578_-	SINE	Alu	AluSz
CAediting_82310	chr1_94167905_-	LINE	L1	L1ME3D
CAediting_82311	chr1_94168405_-	SINE	Alu	AluSg
CAediting_82312	chr1_94168430_-	SINE	Alu	AluSg
CAediting_82313	chr1_94168432_-	SINE	Alu	AluSg
CAediting_82314	chr1_94168446_-	SINE	Alu	AluSg
CAediting_82315	chr1_94168455_-	SINE	Alu	AluSg
CAediting_82316	chr1_94168466_-	SINE	Alu	AluSg
CAediting_82317	chr1_94168467_-	SINE	Alu	AluSg
CAediting_82318	chr1_94168475_-	SINE	Alu	AluSg
CAediting_82319	chr1_94168478_-	SINE	Alu	AluSg
CAediting_82320	chr1_94168481_-	SINE	Alu	AluSg
CAediting_82321	chr1_94168485_-	SINE	Alu	AluSg
CAediting_82322	chr1_94168491_-	SINE	Alu	AluSg
CAediting_82323	chr1_94168494_-	SINE	Alu	AluSg
CAediting_82324	chr1_94168502_-	SINE	Alu	AluSg
CAediting_82325	chr1_94168507_-	SINE	Alu	AluSg
CAediting_82326	chr1_94168521_-	SINE	Alu	AluSg
CAediting_82327	chr1_94168524_-	SINE	Alu	AluSg
CAediting_82328	chr1_94168530_-	SINE	Alu	AluSg
CAediting_82329	chr1_94168534_-	SINE	Alu	AluSg
CAediting_82330	chr1_94168540_-	SINE	Alu	AluSg
CAediting_82331	chr1_94168548_-	SINE	Alu	AluSg
CAediting_82332	chr1_94168549_-	SINE	Alu	AluSg
CAediting_82333	chr1_94168552_-	SINE	Alu	AluSg
CAediting_82334	chr1_94168563_-	SINE	Alu	AluSg
CAediting_82335	chr1_94168564_-	SINE	Alu	AluSg
CAediting_82336	chr1_94168565_-	SINE	Alu	AluSg
CAediting_82337	chr1_94168571_-	SINE	Alu	AluSg
CAediting_82338	chr1_94168573_-	SINE	Alu	AluSg
CAediting_82339	chr1_94168577_-	SINE	Alu	AluSg
CAediting_82340	chr1_94168588_-	SINE	Alu	AluSg
CAediting_82341	chr1_94168594_-	SINE	Alu	AluSg
CAediting_82342	chr1_94168619_-	SINE	Alu	AluSg
CAediting_82343	chr1_94168632_-	SINE	Alu	AluSg
CAediting_82344	chr1_94168635_-	SINE	Alu	AluSg
CAediting_82345	chr1_94168640_-	SINE	Alu	AluSg
CAediting_82346	chr1_94168641_-	SINE	Alu	AluSg
CAediting_82347	chr1_94168649_-	SINE	Alu	AluSg
CAediting_82348	chr1_94206640_-	SINE	Alu	AluSx
CAediting_82349	chr1_94206734_-	SINE	Alu	AluSx
CAediting_82350	chr1_94206747_-	SINE	Alu	AluSx
CAediting_82351	chr1_94206748_-	SINE	Alu	AluSx
CAediting_82352	chr1_94206788_-	SINE	Alu	AluSx
CAediting_82353	chr1_94206820_-	SINE	Alu	AluSx
CAediting_82354	chr1_94207147_-	SINE	Alu	AluSz6
CAediting_82355	chr1_94207188_-	SINE	Alu	AluSz6
CAediting_82356	chr1_94207236_-	SINE	Alu	AluSz6
CAediting_82357	chr1_94207258_-	SINE	Alu	AluSz6
CAediting_82358	chr1_94207990_-	SINE	Alu	AluJr
CAediting_82359	chr1_94208009_-	SINE	Alu	AluJr
CAediting_82360	chr1_94208113_-	SINE	Alu	AluJr
CAediting_82361	chr1_94208182_-	SINE	Alu	AluJr
CAediting_82362	chr1_94208193_-	SINE	Alu	AluJr
CAediting_82363	chr1_94217808_-	SINE	Alu	AluJr4
CAediting_82364	chr1_94238166_-	SINE	Alu	AluSx1
CAediting_82365	chr1_94238169_-	SINE	Alu	AluSx1
CAediting_82366	chr1_94238185_-	SINE	Alu	AluSx1
CAediting_82367	chr1_94238198_-	SINE	Alu	AluSx1
CAediting_82368	chr1_94238201_-	SINE	Alu	AluSx1
CAediting_82369	chr1_94238212_-	SINE	Alu	AluSx1
CAediting_82370	chr1_94238234_-	SINE	Alu	AluSx1
CAediting_82371	chr1_94238236_-	SINE	Alu	AluSx1
CAediting_82372	chr1_94238237_-	SINE	Alu	AluSx1
CAediting_82373	chr1_94238239_-	SINE	Alu	AluSx1
CAediting_82374	chr1_94238240_-	SINE	Alu	AluSx1
CAediting_82375	chr1_94238243_-	SINE	Alu	AluSx1
CAediting_82376	chr1_94238254_-	SINE	Alu	AluSx1
CAediting_82377	chr1_94238260_-	SINE	Alu	AluSx1
CAediting_82378	chr1_94238264_-	SINE	Alu	AluSx1
CAediting_82379	chr1_94249720_-	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for ARHGAP29

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000137962.11.ARHGAP29.

Correlation between RNA A-to-I editing and PSI for ENSG00000137962.11.ARHGAP29.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ARHGAP29

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_82303.ENSG00000137962.ARHGAP29.png
Soverview

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Protein coding region RNA A-to-I editings for ARHGAP29

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ARHGAP29

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000137962.11	ENST00000552844	hsa-miR-641	94149847	94149853	7mer-m8	94149847	94149871	141	-13.94

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ARHGAP29

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ARHGAP29

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_82280	chr1_94167338_-	1.36821895224027e-05	0.455056706975409	.	.	.	.
KIRP	CAediting_82287	chr1_94167411_-	0.0427674204935306	0.22431531926432	0.0187061415635211	0.259186502749107	.	.
BRCA	CAediting_82290	chr1_94167417_-	0.00054647835060113	0.440088100028552	.	.	.	.
BRCA	CAediting_82292	chr1_94167426_-	0.00336472412667178	0.304270132225705	.	.	.	.
KIRP	CAediting_82292	chr1_94167426_-	0.00127172187513892	0.314781684930245	.	.	.	.
BRCA	CAediting_82294	chr1_94167435_-	0.00457690956088364	0.3327592379942	.	.	.	.
KIRC	CAediting_82294	chr1_94167435_-	.	.	.	.	0.0364172895521882	0.216131989079403
BRCA	CAediting_82295	chr1_94167442_-	0.00569139309584115	0.297494209110465	.	.	.	.
KIRP	CAediting_82301	chr1_94167482_-	0.0175702743511005	0.184113803197463	.	.	.	.
BRCA	CAediting_82302	chr1_94167499_-	0.0286409983440798	0.223446846658352	.	.	.	.
KIRC	CAediting_82302	chr1_94167499_-	0.0175260976710625	0.188186374148336	.	.	.	.
KIRP	CAediting_82302	chr1_94167499_-	0.000760719471175278	0.290562371900514	.	.	.	.
BRCA	CAediting_82303	chr1_94167500_-	1.87240888161886e-06	0.455916436627505	.	.	.	.
KIRC	CAediting_82303	chr1_94167500_-	0.0478264753197502	0.158202150995297	.	.	.	.
KIRP	CAediting_82303	chr1_94167500_-	0.000480660669613596	0.295394455218854	.	.	.	.
OV	CAediting_82303	chr1_94167500_-	0.0460166405790412	0.248405178178143	.	.	.	.

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Relation with cancer stages for ARHGAP29

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRP	clinical_stage	CAediting_82303	chr1_94167500_-	0.0132065762267485	-0.258913724290697
KIRP	pathologic_stage	CAediting_82295	chr1_94167442_-	0.00121011081202654	0.457913228274692

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Relation with survival for ARHGAP29

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ARHGAP29

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ARHGAP29

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ARHGAP29	C0008925	Cleft Palate	1	GENOMICS_ENGLAND
ARHGAP29	C0158646	Cleft palate with cleft lip	1	ORPHANET
ARHGAP29	C0334634	Malignant lymphoma, lymphocytic, intermediate differentiation, diffuse	1	CTD_human
ARHGAP29	C0751958	Lymphoma, Lymphocytic, Intermediate	1	CTD_human
ARHGAP29	C0810364	Cleft Lip with or without Cleft Palate	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene