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Editing gene: TXNL1 (CAeditome ID:9352)

Gene summary for TXNL1

Gene summary

Gene information	Gene symbol	TXNL1
	Gene ID	9352
	Gene name	thioredoxin like 1
	Synonyms	HEL-S-114\|TRP32\|TXL-1\|TXNL\|Txl
	Cytomap	18q21.31
	Type of gene	protein-coding
	Description	thioredoxin-like protein 132 kDa thioredoxin-related proteinepididymis secretory protein Li 114thioredoxin-related 32 kDa proteinthioredoxin-related protein 1
	Modification date	20210518
	UniProtAcc	O43396
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TXNL1	GO:0015036	Thioredoxin-like protein 1	9668102
TXNL1	GO:0005737	Thioredoxin-like protein 1	9668102
TXNL1	GO:0005829	Thioredoxin-like protein 1	0000052

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RNA A-to-I events for TXNL1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000091164.11

RNA A-to-I editing events in Cancer.

CAediting_1265220(56599580, -), CAediting_1265221(56599633, -), CAediting_1265222(56599644, -), CAediting_1265223(56599650, -), CAediting_1265224(56599657, -), CAediting_1265225(56599658, -), CAediting_1265226(56599676, -), CAediting_1265227(56599693, -), CAediting_1265228(56599706, -), CAediting_1265229(56599718, -), CAediting_1265230(56599722, -), CAediting_1265231(56599726, -), CAediting_1265232(56599735, -), CAediting_1265233(56599737, -), CAediting_1265234(56599763, -), CAediting_1265235(56599772, -), CAediting_1265236(56599775, -), CAediting_1265237(56599777, -), CAediting_1265238(56599786, -), CAediting_1265239(56599791, -), CAediting_1265240(56599796, -), CAediting_1265241(56599831, -), CAediting_1265242(56599832, -), CAediting_1265243(56599850, -), CAediting_1265244(56602107, -), CAediting_1265245(56602122, -), CAediting_1265246(56602193, -), CAediting_1265247(56602262, -), CAediting_1265248(56606187, -), CAediting_1265249(56606320, -), CAediting_1265250(56606344, -), CAediting_1265251(56606607, -), CAediting_1265252(56606618, -), CAediting_1265253(56606631, -), CAediting_1265254(56606705, -), CAediting_1265255(56606706, -), CAediting_1265256(56606711, -), CAediting_1265257(56606716, -), CAediting_1265258(56607012, -), CAediting_1265259(56607019, -), CAediting_1265260(56607020, -), CAediting_1265261(56607027, -), CAediting_1265262(56607037, -), CAediting_1265263(56607044, -), CAediting_1265264(56607052, -), CAediting_1265265(56607055, -), CAediting_1265266(56607062, -), CAediting_1265267(56607074, -), CAediting_1265268(56607086, -), CAediting_1265269(56607105, -), CAediting_1265270(56607118, -), CAediting_1265271(56607122, -), CAediting_1265272(56607128, -), CAediting_1265273(56607134, -), CAediting_1265274(56607147, -), CAediting_1265275(56607152, -), CAediting_1265276(56607198, -), CAediting_1265277(56607213, -), CAediting_1265278(56607214, -), CAediting_1265279(56607217, -), CAediting_1265280(56607221, -), CAediting_1265281(56607222, -), CAediting_1265282(56607237, -), CAediting_1265283(56607260, -), CAediting_1265284(56607281, -), CAediting_1265285(56607285, -), CAediting_1265286(56607291, -), CAediting_1265287(56607297, -), CAediting_1265288(56607310, -), CAediting_1265289(56607354, -), CAediting_1265290(56607357, -), CAediting_1265291(56607359, -), CAediting_1265292(56607362, -), CAediting_1265293(56607370, -), CAediting_1265294(56607376, -), CAediting_1265295(56607390, -), CAediting_1265296(56607407, -), CAediting_1265297(56607408, -), CAediting_1265298(56607429, -), CAediting_1265299(56607430, -), CAediting_1265300(56607451, -), CAediting_1265301(56607605, -), CAediting_1265302(56607614, -), CAediting_1265303(56607617, -), CAediting_1265304(56607653, -), CAediting_1265305(56607673, -), CAediting_1265306(56607676, -), CAediting_1265307(56607740, -), CAediting_1265308(56607756, -), CAediting_1265309(56607818, -), CAediting_1265310(56607834, -), CAediting_1265311(56611243, -), CAediting_1265312(56611255, -), CAediting_1265313(56611308, -), CAediting_1265314(56611353, -), CAediting_1265315(56611378, -), CAediting_1265316(56611380, -), CAediting_1265317(56611386, -), CAediting_1265318(56611393, -), CAediting_1265319(56611419, -), CAediting_1265320(56611420, -), CAediting_1265321(56611450, -), CAediting_1265322(56611458, -), CAediting_1265323(56611746, -), CAediting_1265324(56611783, -), CAediting_1265325(56611791, -), CAediting_1265326(56611799, -), CAediting_1265327(56611822, -), CAediting_1265328(56611843, -), CAediting_1265329(56611848, -), CAediting_1265330(56611878, -), CAediting_1265331(56611879, -), CAediting_1265332(56611884, -), CAediting_1265333(56611886, -), CAediting_1265334(56611909, -), CAediting_1265335(56611916, -), CAediting_1265336(56611921, -), CAediting_1265337(56611938, -), CAediting_1265338(56611945, -), CAediting_1265339(56611946, -), CAediting_1265340(56611960, -), CAediting_1265341(56611973, -), CAediting_1265342(56612013, -), CAediting_1265343(56612099, -), CAediting_1265344(56612113, -), CAediting_1265345(56612117, -), CAediting_1265346(56612123, -), CAediting_1265347(56612134, -), CAediting_1265348(56612139, -), CAediting_1265349(56612140, -), CAediting_1265350(56612146, -), CAediting_1265351(56612177, -), CAediting_1265352(56612178, -), CAediting_1265353(56612180, -), CAediting_1265354(56612582, -), CAediting_1265355(56612601, -), CAediting_1265356(56612641, -), CAediting_1265357(56612647, -), CAediting_1265358(56612969, -), CAediting_1265359(56613003, -), CAediting_1265360(56613082, -), CAediting_1265361(56613112, -), CAediting_1265362(56613579, -), CAediting_1265363(56613584, -), CAediting_1265364(56613596, -), CAediting_1265365(56613597, -), CAediting_1265366(56613611, -), CAediting_1265367(56613665, -), CAediting_1265368(56613686, -), CAediting_1265369(56613702, -), CAediting_1265370(56613729, -), CAediting_1265371(56613754, -), CAediting_1265372(56613933, -), CAediting_1265373(56613946, -), CAediting_1265374(56613950, -), CAediting_1265375(56613951, -), CAediting_1265376(56620106, -), CAediting_1265377(56621327, -), CAediting_1265378(56621333, -), CAediting_1265379(56621355, -), CAediting_1265380(56621363, -), CAediting_1265381(56621364, -), CAediting_1265382(56626661, -), CAediting_1265383(56626729, -), CAediting_1265384(56626730, -), CAediting_1265385(56626771, -), CAediting_1265386(56626780, -), CAediting_1265387(56626837, -), CAediting_1265388(56626902, -), CAediting_1265389(56626926, -), CAediting_1265390(56626933, -), CAediting_1265391(56626943, -), CAediting_1265392(56627078, -), CAediting_1265393(56630978, -), CAediting_1265394(56630983, -), CAediting_1265395(56630989, -), CAediting_1265396(56631019, -), CAediting_1265397(56631049, -), CAediting_1265398(56631059, -), CAediting_1265399(56631079, -), CAediting_1265400(56631107, -), CAediting_1265401(56631112, -), CAediting_1265402(56631159, -), CAediting_1265403(56631820, -), CAediting_1265404(56631836, -), CAediting_1265405(56631837, -), CAediting_1265406(56635094, -), CAediting_1265407(56635136, -), CAediting_1265408(56635172, -),

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RNA editing positional annotations for TXNL1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1265220	chr18_56599580_-	ncRNA_exonic
CAediting_1265221	chr18_56599633_-	ncRNA_exonic
CAediting_1265222	chr18_56599644_-	ncRNA_exonic
CAediting_1265223	chr18_56599650_-	ncRNA_exonic
CAediting_1265224	chr18_56599657_-	ncRNA_exonic
CAediting_1265225	chr18_56599658_-	ncRNA_exonic
CAediting_1265226	chr18_56599676_-	ncRNA_exonic
CAediting_1265227	chr18_56599693_-	ncRNA_exonic
CAediting_1265228	chr18_56599706_-	ncRNA_exonic
CAediting_1265229	chr18_56599718_-	ncRNA_exonic
CAediting_1265230	chr18_56599722_-	ncRNA_exonic
CAediting_1265231	chr18_56599726_-	ncRNA_exonic
CAediting_1265232	chr18_56599735_-	ncRNA_exonic
CAediting_1265233	chr18_56599737_-	ncRNA_exonic
CAediting_1265234	chr18_56599763_-	ncRNA_exonic
CAediting_1265235	chr18_56599772_-	ncRNA_exonic
CAediting_1265236	chr18_56599775_-	ncRNA_exonic
CAediting_1265237	chr18_56599777_-	ncRNA_exonic
CAediting_1265238	chr18_56599786_-	ncRNA_exonic
CAediting_1265239	chr18_56599791_-	ncRNA_exonic
CAediting_1265240	chr18_56599796_-	ncRNA_exonic
CAediting_1265241	chr18_56599831_-	ncRNA_exonic
CAediting_1265242	chr18_56599832_-	ncRNA_exonic
CAediting_1265243	chr18_56599850_-	ncRNA_exonic
CAediting_1265244	chr18_56602107_-	UTR3
CAediting_1265245	chr18_56602122_-	UTR3
CAediting_1265246	chr18_56602193_-	UTR3
CAediting_1265247	chr18_56602262_-	UTR3
CAediting_1265248	chr18_56606187_-	intronic
CAediting_1265249	chr18_56606320_-	intronic
CAediting_1265250	chr18_56606344_-	intronic
CAediting_1265251	chr18_56606607_-	intronic
CAediting_1265252	chr18_56606618_-	intronic
CAediting_1265253	chr18_56606631_-	intronic
CAediting_1265254	chr18_56606705_-	intronic
CAediting_1265255	chr18_56606706_-	intronic
CAediting_1265256	chr18_56606711_-	intronic
CAediting_1265257	chr18_56606716_-	intronic
CAediting_1265258	chr18_56607012_-	intronic
CAediting_1265259	chr18_56607019_-	intronic
CAediting_1265260	chr18_56607020_-	intronic
CAediting_1265261	chr18_56607027_-	intronic
CAediting_1265262	chr18_56607037_-	intronic
CAediting_1265263	chr18_56607044_-	intronic
CAediting_1265264	chr18_56607052_-	intronic
CAediting_1265265	chr18_56607055_-	intronic
CAediting_1265266	chr18_56607062_-	intronic
CAediting_1265267	chr18_56607074_-	intronic
CAediting_1265268	chr18_56607086_-	intronic
CAediting_1265269	chr18_56607105_-	intronic
CAediting_1265270	chr18_56607118_-	intronic
CAediting_1265271	chr18_56607122_-	intronic
CAediting_1265272	chr18_56607128_-	intronic
CAediting_1265273	chr18_56607134_-	intronic
CAediting_1265274	chr18_56607147_-	intronic
CAediting_1265275	chr18_56607152_-	intronic
CAediting_1265276	chr18_56607198_-	intronic
CAediting_1265277	chr18_56607213_-	intronic
CAediting_1265278	chr18_56607214_-	intronic
CAediting_1265279	chr18_56607217_-	intronic
CAediting_1265280	chr18_56607221_-	intronic
CAediting_1265281	chr18_56607222_-	intronic
CAediting_1265282	chr18_56607237_-	intronic
CAediting_1265283	chr18_56607260_-	intronic
CAediting_1265284	chr18_56607281_-	intronic
CAediting_1265285	chr18_56607285_-	intronic
CAediting_1265286	chr18_56607291_-	intronic
CAediting_1265287	chr18_56607297_-	intronic
CAediting_1265288	chr18_56607310_-	intronic
CAediting_1265289	chr18_56607354_-	intronic
CAediting_1265290	chr18_56607357_-	intronic
CAediting_1265291	chr18_56607359_-	intronic
CAediting_1265292	chr18_56607362_-	intronic
CAediting_1265293	chr18_56607370_-	intronic
CAediting_1265294	chr18_56607376_-	intronic
CAediting_1265295	chr18_56607390_-	intronic
CAediting_1265296	chr18_56607407_-	intronic
CAediting_1265297	chr18_56607408_-	intronic
CAediting_1265298	chr18_56607429_-	intronic
CAediting_1265299	chr18_56607430_-	intronic
CAediting_1265300	chr18_56607451_-	intronic
CAediting_1265301	chr18_56607605_-	intronic
CAediting_1265302	chr18_56607614_-	intronic
CAediting_1265303	chr18_56607617_-	intronic
CAediting_1265304	chr18_56607653_-	intronic
CAediting_1265305	chr18_56607673_-	intronic
CAediting_1265306	chr18_56607676_-	intronic
CAediting_1265307	chr18_56607740_-	intronic
CAediting_1265308	chr18_56607756_-	intronic
CAediting_1265309	chr18_56607818_-	intronic
CAediting_1265310	chr18_56607834_-	intronic
CAediting_1265311	chr18_56611243_-	intronic
CAediting_1265312	chr18_56611255_-	intronic
CAediting_1265313	chr18_56611308_-	intronic
CAediting_1265314	chr18_56611353_-	intronic
CAediting_1265315	chr18_56611378_-	intronic
CAediting_1265316	chr18_56611380_-	intronic
CAediting_1265317	chr18_56611386_-	intronic
CAediting_1265318	chr18_56611393_-	intronic
CAediting_1265319	chr18_56611419_-	intronic
CAediting_1265320	chr18_56611420_-	intronic
CAediting_1265321	chr18_56611450_-	intronic
CAediting_1265322	chr18_56611458_-	intronic
CAediting_1265323	chr18_56611746_-	intronic
CAediting_1265324	chr18_56611783_-	intronic
CAediting_1265325	chr18_56611791_-	intronic
CAediting_1265326	chr18_56611799_-	intronic
CAediting_1265327	chr18_56611822_-	intronic
CAediting_1265328	chr18_56611843_-	intronic
CAediting_1265329	chr18_56611848_-	intronic
CAediting_1265330	chr18_56611878_-	intronic
CAediting_1265331	chr18_56611879_-	intronic
CAediting_1265332	chr18_56611884_-	intronic
CAediting_1265333	chr18_56611886_-	intronic
CAediting_1265334	chr18_56611909_-	intronic
CAediting_1265335	chr18_56611916_-	intronic
CAediting_1265336	chr18_56611921_-	intronic
CAediting_1265337	chr18_56611938_-	intronic
CAediting_1265338	chr18_56611945_-	intronic
CAediting_1265339	chr18_56611946_-	intronic
CAediting_1265340	chr18_56611960_-	intronic
CAediting_1265341	chr18_56611973_-	intronic
CAediting_1265342	chr18_56612013_-	intronic
CAediting_1265343	chr18_56612099_-	intronic
CAediting_1265344	chr18_56612113_-	intronic
CAediting_1265345	chr18_56612117_-	intronic
CAediting_1265346	chr18_56612123_-	intronic
CAediting_1265347	chr18_56612134_-	intronic
CAediting_1265348	chr18_56612139_-	intronic
CAediting_1265349	chr18_56612140_-	intronic
CAediting_1265350	chr18_56612146_-	intronic
CAediting_1265351	chr18_56612177_-	intronic
CAediting_1265352	chr18_56612178_-	intronic
CAediting_1265353	chr18_56612180_-	intronic
CAediting_1265354	chr18_56612582_-	intronic
CAediting_1265355	chr18_56612601_-	intronic
CAediting_1265356	chr18_56612641_-	intronic
CAediting_1265357	chr18_56612647_-	intronic
CAediting_1265358	chr18_56612969_-	intronic
CAediting_1265359	chr18_56613003_-	intronic
CAediting_1265360	chr18_56613082_-	intronic
CAediting_1265361	chr18_56613112_-	intronic
CAediting_1265362	chr18_56613579_-	intronic
CAediting_1265363	chr18_56613584_-	intronic
CAediting_1265364	chr18_56613596_-	intronic
CAediting_1265365	chr18_56613597_-	intronic
CAediting_1265366	chr18_56613611_-	intronic
CAediting_1265367	chr18_56613665_-	intronic
CAediting_1265368	chr18_56613686_-	intronic
CAediting_1265369	chr18_56613702_-	intronic
CAediting_1265370	chr18_56613729_-	intronic
CAediting_1265371	chr18_56613754_-	intronic
CAediting_1265372	chr18_56613933_-	intronic
CAediting_1265373	chr18_56613946_-	intronic
CAediting_1265374	chr18_56613950_-	intronic
CAediting_1265375	chr18_56613951_-	intronic
CAediting_1265376	chr18_56620106_-	intronic
CAediting_1265377	chr18_56621327_-	intronic
CAediting_1265378	chr18_56621333_-	intronic
CAediting_1265379	chr18_56621355_-	intronic
CAediting_1265380	chr18_56621363_-	intronic
CAediting_1265381	chr18_56621364_-	intronic
CAediting_1265382	chr18_56626661_-	intronic
CAediting_1265383	chr18_56626729_-	intronic
CAediting_1265384	chr18_56626730_-	intronic
CAediting_1265385	chr18_56626771_-	intronic
CAediting_1265386	chr18_56626780_-	intronic
CAediting_1265387	chr18_56626837_-	intronic
CAediting_1265388	chr18_56626902_-	intronic
CAediting_1265389	chr18_56626926_-	intronic
CAediting_1265390	chr18_56626933_-	intronic
CAediting_1265391	chr18_56626943_-	intronic
CAediting_1265392	chr18_56627078_-	intronic
CAediting_1265393	chr18_56630978_-	intronic
CAediting_1265394	chr18_56630983_-	intronic
CAediting_1265395	chr18_56630989_-	intronic
CAediting_1265396	chr18_56631019_-	intronic
CAediting_1265397	chr18_56631049_-	intronic
CAediting_1265398	chr18_56631059_-	intronic
CAediting_1265399	chr18_56631079_-	intronic
CAediting_1265400	chr18_56631107_-	intronic
CAediting_1265401	chr18_56631112_-	intronic
CAediting_1265402	chr18_56631159_-	intronic
CAediting_1265403	chr18_56631820_-	intronic
CAediting_1265404	chr18_56631836_-	intronic
CAediting_1265405	chr18_56631837_-	intronic
CAediting_1265406	chr18_56635094_-	intronic
CAediting_1265407	chr18_56635136_-	intronic
CAediting_1265408	chr18_56635172_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1265220	chr18_56599580_-	SINE	Alu	AluSx1
CAediting_1265221	chr18_56599633_-	SINE	Alu	AluSx1
CAediting_1265222	chr18_56599644_-	SINE	Alu	AluSx1
CAediting_1265223	chr18_56599650_-	SINE	Alu	AluSx1
CAediting_1265224	chr18_56599657_-	SINE	Alu	AluSx1
CAediting_1265225	chr18_56599658_-	SINE	Alu	AluSx1
CAediting_1265226	chr18_56599676_-	SINE	Alu	AluSx1
CAediting_1265227	chr18_56599693_-	SINE	Alu	AluSx1
CAediting_1265228	chr18_56599706_-	SINE	Alu	AluSx1
CAediting_1265229	chr18_56599718_-	SINE	Alu	AluSx1
CAediting_1265230	chr18_56599722_-	SINE	Alu	AluSx1
CAediting_1265231	chr18_56599726_-	SINE	Alu	AluSx1
CAediting_1265232	chr18_56599735_-	SINE	Alu	AluSx1
CAediting_1265233	chr18_56599737_-	SINE	Alu	AluSx1
CAediting_1265234	chr18_56599763_-	SINE	Alu	AluSx1
CAediting_1265235	chr18_56599772_-	SINE	Alu	AluSx1
CAediting_1265236	chr18_56599775_-	SINE	Alu	AluSx1
CAediting_1265237	chr18_56599777_-	SINE	Alu	AluSx1
CAediting_1265238	chr18_56599786_-	SINE	Alu	AluSx1
CAediting_1265239	chr18_56599791_-	SINE	Alu	AluSx1
CAediting_1265240	chr18_56599796_-	SINE	Alu	AluSx1
CAediting_1265241	chr18_56599831_-	SINE	Alu	AluSx1
CAediting_1265242	chr18_56599832_-	SINE	Alu	AluSx1
CAediting_1265243	chr18_56599850_-	SINE	Alu	AluSx1
CAediting_1265244	chr18_56602107_-	SINE	Alu	AluSq2
CAediting_1265245	chr18_56602122_-	SINE	Alu	AluSq2
CAediting_1265246	chr18_56602193_-	SINE	Alu	AluSq2
CAediting_1265247	chr18_56602262_-	SINE	Alu	AluSq2
CAediting_1265248	chr18_56606187_-	SINE	Alu	AluY
CAediting_1265249	chr18_56606320_-	SINE	Alu	AluY
CAediting_1265250	chr18_56606344_-	SINE	Alu	AluY
CAediting_1265251	chr18_56606607_-	LINE	L2	L2b
CAediting_1265252	chr18_56606618_-	LINE	L2	L2b
CAediting_1265253	chr18_56606631_-	LINE	L2	L2b
CAediting_1265258	chr18_56607012_-	SINE	Alu	AluJo
CAediting_1265259	chr18_56607019_-	SINE	Alu	AluJo
CAediting_1265260	chr18_56607020_-	SINE	Alu	AluJo
CAediting_1265261	chr18_56607027_-	SINE	Alu	AluJo
CAediting_1265262	chr18_56607037_-	SINE	Alu	AluJo
CAediting_1265263	chr18_56607044_-	SINE	Alu	AluJo
CAediting_1265264	chr18_56607052_-	SINE	Alu	AluJo
CAediting_1265265	chr18_56607055_-	SINE	Alu	AluJo
CAediting_1265266	chr18_56607062_-	SINE	Alu	AluJo
CAediting_1265267	chr18_56607074_-	SINE	Alu	AluJo
CAediting_1265268	chr18_56607086_-	SINE	Alu	AluJo
CAediting_1265269	chr18_56607105_-	SINE	Alu	AluJo
CAediting_1265270	chr18_56607118_-	SINE	Alu	AluJo
CAediting_1265271	chr18_56607122_-	SINE	Alu	AluJo
CAediting_1265272	chr18_56607128_-	SINE	Alu	AluJo
CAediting_1265273	chr18_56607134_-	SINE	Alu	AluJo
CAediting_1265274	chr18_56607147_-	SINE	Alu	AluJo
CAediting_1265275	chr18_56607152_-	SINE	Alu	AluJo
CAediting_1265276	chr18_56607198_-	SINE	Alu	AluJo
CAediting_1265277	chr18_56607213_-	SINE	Alu	AluJo
CAediting_1265278	chr18_56607214_-	SINE	Alu	AluJo
CAediting_1265279	chr18_56607217_-	SINE	Alu	AluJo
CAediting_1265280	chr18_56607221_-	SINE	Alu	AluJo
CAediting_1265281	chr18_56607222_-	SINE	Alu	AluJo
CAediting_1265282	chr18_56607237_-	SINE	Alu	AluJo
CAediting_1265283	chr18_56607260_-	SINE	Alu	AluJo
CAediting_1265284	chr18_56607281_-	SINE	Alu	AluJo
CAediting_1265285	chr18_56607285_-	SINE	Alu	AluJo
CAediting_1265286	chr18_56607291_-	SINE	Alu	AluJo
CAediting_1265287	chr18_56607297_-	SINE	Alu	AluJo
CAediting_1265288	chr18_56607310_-	DNA	TcMar-Tigger	MER44A
CAediting_1265289	chr18_56607354_-	SINE	Alu	FLAM_C
CAediting_1265290	chr18_56607357_-	SINE	Alu	FLAM_C
CAediting_1265291	chr18_56607359_-	SINE	Alu	FLAM_C
CAediting_1265292	chr18_56607362_-	SINE	Alu	FLAM_C
CAediting_1265293	chr18_56607370_-	SINE	Alu	FLAM_C
CAediting_1265294	chr18_56607376_-	SINE	Alu	FLAM_C
CAediting_1265295	chr18_56607390_-	SINE	Alu	FLAM_C
CAediting_1265296	chr18_56607407_-	SINE	Alu	FLAM_C
CAediting_1265297	chr18_56607408_-	SINE	Alu	FLAM_C
CAediting_1265298	chr18_56607429_-	SINE	Alu	FLAM_C
CAediting_1265299	chr18_56607430_-	SINE	Alu	FLAM_C
CAediting_1265300	chr18_56607451_-	SINE	Alu	FLAM_C
CAediting_1265301	chr18_56607605_-	SINE	Alu	AluSq2
CAediting_1265302	chr18_56607614_-	SINE	Alu	AluSq2
CAediting_1265303	chr18_56607617_-	SINE	Alu	AluSq2
CAediting_1265304	chr18_56607653_-	SINE	Alu	AluSq2
CAediting_1265305	chr18_56607673_-	SINE	Alu	AluSq2
CAediting_1265306	chr18_56607676_-	SINE	Alu	AluSq2
CAediting_1265307	chr18_56607740_-	SINE	Alu	AluSq2
CAediting_1265308	chr18_56607756_-	SINE	Alu	AluSq2
CAediting_1265309	chr18_56607818_-	SINE	Alu	AluSq2
CAediting_1265310	chr18_56607834_-	SINE	Alu	AluSq2
CAediting_1265311	chr18_56611243_-	SINE	Alu	AluSq
CAediting_1265312	chr18_56611255_-	SINE	Alu	AluSq
CAediting_1265313	chr18_56611308_-	SINE	Alu	AluSq
CAediting_1265314	chr18_56611353_-	SINE	Alu	AluSq
CAediting_1265315	chr18_56611378_-	SINE	Alu	AluSq
CAediting_1265316	chr18_56611380_-	SINE	Alu	AluSq
CAediting_1265317	chr18_56611386_-	SINE	Alu	AluSq
CAediting_1265318	chr18_56611393_-	SINE	Alu	AluSq
CAediting_1265319	chr18_56611419_-	SINE	Alu	AluSq
CAediting_1265320	chr18_56611420_-	SINE	Alu	AluSq
CAediting_1265321	chr18_56611450_-	SINE	Alu	AluSq
CAediting_1265322	chr18_56611458_-	SINE	Alu	AluSq
CAediting_1265323	chr18_56611746_-	SINE	Alu	AluSx1
CAediting_1265324	chr18_56611783_-	SINE	Alu	AluSx1
CAediting_1265325	chr18_56611791_-	SINE	Alu	AluSx1
CAediting_1265326	chr18_56611799_-	SINE	Alu	AluSx1
CAediting_1265327	chr18_56611822_-	SINE	Alu	AluSx1
CAediting_1265328	chr18_56611843_-	SINE	Alu	AluSx1
CAediting_1265329	chr18_56611848_-	SINE	Alu	AluSx
CAediting_1265330	chr18_56611878_-	SINE	Alu	AluSx
CAediting_1265331	chr18_56611879_-	SINE	Alu	AluSx
CAediting_1265332	chr18_56611884_-	SINE	Alu	AluSx
CAediting_1265333	chr18_56611886_-	SINE	Alu	AluSx
CAediting_1265334	chr18_56611909_-	SINE	Alu	AluSx
CAediting_1265335	chr18_56611916_-	SINE	Alu	AluSx
CAediting_1265336	chr18_56611921_-	SINE	Alu	AluSx
CAediting_1265337	chr18_56611938_-	SINE	Alu	AluSx
CAediting_1265338	chr18_56611945_-	SINE	Alu	AluSx
CAediting_1265339	chr18_56611946_-	SINE	Alu	AluSx
CAediting_1265340	chr18_56611960_-	SINE	Alu	AluSx
CAediting_1265341	chr18_56611973_-	SINE	Alu	AluSx
CAediting_1265342	chr18_56612013_-	SINE	Alu	AluSx
CAediting_1265343	chr18_56612099_-	SINE	Alu	AluSx
CAediting_1265344	chr18_56612113_-	SINE	Alu	AluSx
CAediting_1265345	chr18_56612117_-	SINE	Alu	AluSx
CAediting_1265346	chr18_56612123_-	SINE	Alu	AluSx
CAediting_1265347	chr18_56612134_-	SINE	Alu	AluSx
CAediting_1265348	chr18_56612139_-	SINE	Alu	AluSx
CAediting_1265349	chr18_56612140_-	SINE	Alu	AluSx
CAediting_1265350	chr18_56612146_-	SINE	Alu	AluSx
CAediting_1265354	chr18_56612582_-	SINE	Alu	FLAM_C
CAediting_1265355	chr18_56612601_-	SINE	Alu	FLAM_C
CAediting_1265356	chr18_56612641_-	SINE	Alu	FLAM_C
CAediting_1265357	chr18_56612647_-	SINE	Alu	FLAM_C
CAediting_1265358	chr18_56612969_-	SINE	Alu	AluJb
CAediting_1265359	chr18_56613003_-	SINE	Alu	AluJb
CAediting_1265360	chr18_56613082_-	SINE	Alu	AluJb
CAediting_1265361	chr18_56613112_-	SINE	Alu	AluJb
CAediting_1265362	chr18_56613579_-	SINE	Alu	AluJo
CAediting_1265363	chr18_56613584_-	SINE	Alu	AluJo
CAediting_1265364	chr18_56613596_-	SINE	Alu	AluJo
CAediting_1265365	chr18_56613597_-	SINE	Alu	AluJo
CAediting_1265366	chr18_56613611_-	SINE	Alu	AluJo
CAediting_1265367	chr18_56613665_-	SINE	Alu	AluJo
CAediting_1265368	chr18_56613686_-	SINE	Alu	AluJo
CAediting_1265369	chr18_56613702_-	SINE	Alu	AluJo
CAediting_1265370	chr18_56613729_-	SINE	Alu	AluJo
CAediting_1265371	chr18_56613754_-	SINE	Alu	AluJo
CAediting_1265372	chr18_56613933_-	SINE	Alu	FLAM_A
CAediting_1265373	chr18_56613946_-	SINE	Alu	FLAM_A
CAediting_1265374	chr18_56613950_-	SINE	Alu	FLAM_A
CAediting_1265375	chr18_56613951_-	SINE	Alu	FLAM_A
CAediting_1265376	chr18_56620106_-	SINE	Alu	AluSz
CAediting_1265377	chr18_56621327_-	SINE	Alu	AluSx
CAediting_1265378	chr18_56621333_-	SINE	Alu	AluSx
CAediting_1265379	chr18_56621355_-	SINE	Alu	AluSx
CAediting_1265380	chr18_56621363_-	SINE	Alu	AluSx
CAediting_1265381	chr18_56621364_-	SINE	Alu	AluSx
CAediting_1265382	chr18_56626661_-	SINE	Alu	AluSx1
CAediting_1265383	chr18_56626729_-	SINE	Alu	AluSx1
CAediting_1265384	chr18_56626730_-	SINE	Alu	AluSx1
CAediting_1265385	chr18_56626771_-	SINE	Alu	AluSx1
CAediting_1265386	chr18_56626780_-	SINE	Alu	AluSx1
CAediting_1265387	chr18_56626837_-	SINE	Alu	AluJb
CAediting_1265388	chr18_56626902_-	SINE	Alu	AluJb
CAediting_1265389	chr18_56626926_-	SINE	Alu	AluJb
CAediting_1265390	chr18_56626933_-	SINE	Alu	AluJb
CAediting_1265391	chr18_56626943_-	SINE	Alu	AluJb
CAediting_1265392	chr18_56627078_-	SINE	Alu	AluJb
CAediting_1265393	chr18_56630978_-	SINE	Alu	AluJb
CAediting_1265394	chr18_56630983_-	SINE	Alu	AluJb
CAediting_1265395	chr18_56630989_-	SINE	Alu	AluJb
CAediting_1265396	chr18_56631019_-	SINE	Alu	AluJb
CAediting_1265397	chr18_56631049_-	SINE	Alu	AluJb
CAediting_1265398	chr18_56631059_-	SINE	Alu	AluJb
CAediting_1265399	chr18_56631079_-	SINE	Alu	AluJb
CAediting_1265400	chr18_56631107_-	SINE	Alu	AluJb
CAediting_1265401	chr18_56631112_-	SINE	Alu	AluJb
CAediting_1265402	chr18_56631159_-	SINE	Alu	AluJb
CAediting_1265403	chr18_56631820_-	SINE	Alu	AluSq2
CAediting_1265404	chr18_56631836_-	SINE	Alu	AluSq2
CAediting_1265405	chr18_56631837_-	SINE	Alu	AluSq2
CAediting_1265406	chr18_56635094_-	SINE	Alu	AluJr
CAediting_1265407	chr18_56635136_-	SINE	Alu	AluJr
CAediting_1265408	chr18_56635172_-	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for TXNL1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000091164.11.TXNL1.

Correlation between RNA A-to-I editing and PSI for ENSG00000091164.11.TXNL1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TXNL1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TXNL1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TXNL1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000091164.11	ENST00000586262	hsa-miR-548aa	56609656	56609663	8mer-1a	56609656	56609684	147	-9.84

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442554	chr5_154685830_+	ENSG00000091164.11	ENST00000586262	hsa-miR-1303	56609447	56609453	7mer-m8	56609446	56609465	141	-8.44
CAediting_524911	chr7_5495852_-	ENSG00000091164.11	ENST00000586262	hsa-miR-589-3p	56608484	56608490	7mer-m8	56608483	56608508	143	-14.34
CAediting_1351755	chr19_40282625_-	ENSG00000091164.11	ENST00000586262	hsa-miR-641	56610781	56610788	8mer-1a	56610781	56610804	140	-8.49

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TXNL1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TXNL1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_1265272	chr18_56607128_-	0.00555017719943794	0.350965967795674	.	.	.	.

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Relation with cancer stages for TXNL1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_1265263	chr18_56607044_-	0.0193720900787309	0.336466580884939
STAD	pathologic_stage	CAediting_1265264	chr18_56607052_-	0.0189991561497972	0.263414350255584

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Relation with survival for TXNL1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TXNL1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TXNL1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene