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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ZNF461 (CAeditome ID:92283)

Gene summary for ZNF461

check button Gene summary
Gene informationGene symbol

ZNF461

Gene ID

92283

Gene namezinc finger protein 461
SynonymsGIOT-1|GIOT1|HZF28
Cytomap

19q13.12

Type of geneprotein-coding
Descriptionzinc finger protein 461gonadotropin-inducible ovary transcription repressor 1zinc finger protein 28
Modification date20210518
UniProtAcc

Q8TAF7

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for ZNF461

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000197808.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1341028(36637195, -), CAediting_1341029(36637254, -), CAediting_1341030(36637262, -), CAediting_1341031(36637269, -), CAediting_1341032(36637270, -), CAediting_1341033(36637284, -), CAediting_1341034(36637293, -), CAediting_1341035(36637305, -), CAediting_1341036(36637325, -), CAediting_1341037(36637329, -), CAediting_1341038(36637335, -), CAediting_1341039(36637361, -), CAediting_1341040(36637370, -), CAediting_1341041(36637472, -), CAediting_1341042(36637473, -), CAediting_1341043(36637495, -), CAediting_1341044(36637587, -), CAediting_1341045(36637640, -), CAediting_1341046(36637651, -), CAediting_1341047(36641302, -), CAediting_1341048(36642082, -), CAediting_1341049(36642190, -), CAediting_1341050(36644206, -), CAediting_1341051(36645206, -), CAediting_1341052(36645214, -), CAediting_1341053(36645807, -), CAediting_1341054(36645908, -), CAediting_1341055(36645909, -), CAediting_1341056(36645923, -), CAediting_1341057(36645984, -), CAediting_1341058(36646017, -), CAediting_1341059(36646055, -), CAediting_1341060(36646056, -), CAediting_1341061(36646074, -), CAediting_1341062(36646193, -), CAediting_1341063(36646228, -), CAediting_1341064(36646269, -), CAediting_1341065(36646307, -), CAediting_1341066(36646310, -), CAediting_1341067(36646311, -), CAediting_1341068(36646314, -), CAediting_1341069(36646379, -), CAediting_1341070(36646404, -), CAediting_1341071(36646405, -), CAediting_1341072(36646411, -), CAediting_1341073(36646413, -), CAediting_1341074(36646418, -), CAediting_1341075(36647274, -), CAediting_1341076(36647281, -), CAediting_1341077(36647283, -), CAediting_1341078(36647295, -), CAediting_1341079(36647305, -), CAediting_1341080(36647322, -), CAediting_1341081(36647337, -), CAediting_1341082(36647344, -), CAediting_1341083(36647368, -), CAediting_1341084(36647374, -), CAediting_1341085(36647383, -), CAediting_1341086(36647392, -), CAediting_1341087(36647396, -), CAediting_1341088(36647400, -), CAediting_1341089(36647440, -), CAediting_1341090(36647453, -), CAediting_1341091(36647457, -), CAediting_1341092(36647458, -), CAediting_1341093(36647471, -), CAediting_1341094(36647477, -), CAediting_1341095(36647483, -), CAediting_1341096(36647488, -), CAediting_1341097(36647517, -), CAediting_1341098(36647531, -), CAediting_1341099(36647533, -), CAediting_1341100(36647535, -), CAediting_1341101(36647537, -), CAediting_1341102(36647789, -), CAediting_1341103(36647798, -), CAediting_1341104(36647925, -), CAediting_1341105(36647952, -), CAediting_1341106(36647960, -), CAediting_1341107(36647961, -), CAediting_1341108(36647963, -), CAediting_1341109(36647965, -), CAediting_1341110(36647978, -), CAediting_1341111(36647999, -), CAediting_1341112(36648002, -), CAediting_1341113(36648016, -), CAediting_1341114(36648025, -), CAediting_1341115(36648032, -), CAediting_1341116(36648037, -), CAediting_1341117(36648041, -), CAediting_1341118(36648043, -), CAediting_1341119(36648059, -), CAediting_1341120(36648069, -), CAediting_1341121(36648094, -), CAediting_1341122(36648098, -), CAediting_1341123(36648099, -), CAediting_1341124(36648116, -), CAediting_1341125(36648127, -), CAediting_1341126(36648133, -), CAediting_1341127(36648141, -), CAediting_1341128(36648145, -), CAediting_1341129(36648677, -), CAediting_1341130(36648682, -), CAediting_1341131(36648748, -), CAediting_1341132(36648749, -), CAediting_1341133(36654464, -), CAediting_1341134(36654490, -), CAediting_1341135(36654505, -), CAediting_1341136(36654532, -), CAediting_1341137(36654571, -), CAediting_1341138(36655031, -), CAediting_1341139(36655057, -), CAediting_1341140(36655061, -), CAediting_1341141(36655067, -), CAediting_1341142(36655126, -), CAediting_1341143(36655197, -), CAediting_1341144(36655223, -), CAediting_1341145(36655414, -), CAediting_1341146(36655536, -), CAediting_1341147(36655547, -), CAediting_1341148(36656136, -), CAediting_1341149(36656888, -), CAediting_1341150(36656896, -), CAediting_1341151(36656922, -), CAediting_1341152(36656944, -), CAediting_1341153(36656960, -), CAediting_1341154(36657047, -), CAediting_1341155(36657065, -), CAediting_1341156(36657692, -), CAediting_1341157(36657716, -), CAediting_1341158(36657747, -), CAediting_1341159(36657759, -), CAediting_1341160(36659523, -), CAediting_1341161(36663612, -), CAediting_1341162(36664422, -), CAediting_1341163(36665454, -), CAediting_1341164(36665466, -), CAediting_1341165(36665626, -), CAediting_1341166(36666162, -), CAediting_1341167(36666227, -), CAediting_1341168(36666232, -), CAediting_1341169(36666233, -), CAediting_1341170(36666251, -), CAediting_1341171(36666259, -), CAediting_1341172(36666267, -), CAediting_1341173(36666269, -), CAediting_1341174(36666272, -), CAediting_1341175(36666288, -), CAediting_1341176(36666291, -), CAediting_1341177(36666297, -), CAediting_1341178(36666318, -), CAediting_1341179(36666361, -), CAediting_1341180(36666366, -), CAediting_1341181(36666367, -), CAediting_1341182(36666375, -),

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RNA editing positional annotations for ZNF461 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1341028chr19_36637195_-UTR3
CAediting_1341029chr19_36637254_-ncRNA_exonic
CAediting_1341030chr19_36637262_-ncRNA_exonic
CAediting_1341031chr19_36637269_-ncRNA_exonic
CAediting_1341032chr19_36637270_-ncRNA_exonic
CAediting_1341033chr19_36637284_-ncRNA_exonic
CAediting_1341034chr19_36637293_-ncRNA_exonic
CAediting_1341035chr19_36637305_-ncRNA_exonic
CAediting_1341036chr19_36637325_-ncRNA_intronic
CAediting_1341037chr19_36637329_-ncRNA_intronic
CAediting_1341038chr19_36637335_-ncRNA_intronic
CAediting_1341039chr19_36637361_-ncRNA_intronic
CAediting_1341040chr19_36637370_-ncRNA_intronic
CAediting_1341041chr19_36637472_-ncRNA_intronic
CAediting_1341042chr19_36637473_-ncRNA_intronic
CAediting_1341043chr19_36637495_-ncRNA_intronic
CAediting_1341044chr19_36637587_-ncRNA_intronic
CAediting_1341045chr19_36637640_-ncRNA_exonic
CAediting_1341046chr19_36637651_-ncRNA_exonic
CAediting_1341047chr19_36641302_-ncRNA_intronic
CAediting_1341048chr19_36642082_-ncRNA_intronic
CAediting_1341049chr19_36642190_-ncRNA_intronic
CAediting_1341050chr19_36644206_-intronic
CAediting_1341051chr19_36645206_-ncRNA_exonic
CAediting_1341052chr19_36645214_-ncRNA_exonic
CAediting_1341053chr19_36645807_-ncRNA_intronic
CAediting_1341054chr19_36645908_-ncRNA_intronic
CAediting_1341055chr19_36645909_-ncRNA_intronic
CAediting_1341056chr19_36645923_-ncRNA_intronic
CAediting_1341057chr19_36645984_-ncRNA_intronic
CAediting_1341058chr19_36646017_-ncRNA_intronic
CAediting_1341059chr19_36646055_-ncRNA_intronic
CAediting_1341060chr19_36646056_-ncRNA_intronic
CAediting_1341061chr19_36646074_-ncRNA_intronic
CAediting_1341062chr19_36646193_-ncRNA_intronic
CAediting_1341063chr19_36646228_-ncRNA_intronic
CAediting_1341064chr19_36646269_-ncRNA_intronic
CAediting_1341065chr19_36646307_-ncRNA_intronic
CAediting_1341066chr19_36646310_-ncRNA_intronic
CAediting_1341067chr19_36646311_-ncRNA_intronic
CAediting_1341068chr19_36646314_-ncRNA_intronic
CAediting_1341069chr19_36646379_-ncRNA_intronic
CAediting_1341070chr19_36646404_-ncRNA_intronic
CAediting_1341071chr19_36646405_-ncRNA_intronic
CAediting_1341072chr19_36646411_-ncRNA_intronic
CAediting_1341073chr19_36646413_-ncRNA_intronic
CAediting_1341074chr19_36646418_-ncRNA_intronic
CAediting_1341075chr19_36647274_-ncRNA_intronic
CAediting_1341076chr19_36647281_-ncRNA_intronic
CAediting_1341077chr19_36647283_-ncRNA_intronic
CAediting_1341078chr19_36647295_-ncRNA_intronic
CAediting_1341079chr19_36647305_-ncRNA_intronic
CAediting_1341080chr19_36647322_-ncRNA_intronic
CAediting_1341081chr19_36647337_-ncRNA_intronic
CAediting_1341082chr19_36647344_-ncRNA_intronic
CAediting_1341083chr19_36647368_-ncRNA_intronic
CAediting_1341084chr19_36647374_-ncRNA_intronic
CAediting_1341085chr19_36647383_-ncRNA_intronic
CAediting_1341086chr19_36647392_-ncRNA_intronic
CAediting_1341087chr19_36647396_-ncRNA_intronic
CAediting_1341088chr19_36647400_-ncRNA_intronic
CAediting_1341089chr19_36647440_-ncRNA_intronic
CAediting_1341090chr19_36647453_-ncRNA_intronic
CAediting_1341091chr19_36647457_-ncRNA_intronic
CAediting_1341092chr19_36647458_-ncRNA_intronic
CAediting_1341093chr19_36647471_-ncRNA_intronic
CAediting_1341094chr19_36647477_-ncRNA_intronic
CAediting_1341095chr19_36647483_-ncRNA_intronic
CAediting_1341096chr19_36647488_-ncRNA_intronic
CAediting_1341097chr19_36647517_-ncRNA_intronic
CAediting_1341098chr19_36647531_-ncRNA_intronic
CAediting_1341099chr19_36647533_-ncRNA_intronic
CAediting_1341100chr19_36647535_-ncRNA_intronic
CAediting_1341101chr19_36647537_-ncRNA_intronic
CAediting_1341102chr19_36647789_-ncRNA_intronic
CAediting_1341103chr19_36647798_-ncRNA_intronic
CAediting_1341104chr19_36647925_-ncRNA_intronic
CAediting_1341105chr19_36647952_-ncRNA_intronic
CAediting_1341106chr19_36647960_-ncRNA_intronic
CAediting_1341107chr19_36647961_-ncRNA_intronic
CAediting_1341108chr19_36647963_-ncRNA_intronic
CAediting_1341109chr19_36647965_-ncRNA_intronic
CAediting_1341110chr19_36647978_-ncRNA_intronic
CAediting_1341111chr19_36647999_-ncRNA_intronic
CAediting_1341112chr19_36648002_-ncRNA_intronic
CAediting_1341113chr19_36648016_-ncRNA_intronic
CAediting_1341114chr19_36648025_-ncRNA_intronic
CAediting_1341115chr19_36648032_-ncRNA_intronic
CAediting_1341116chr19_36648037_-ncRNA_intronic
CAediting_1341117chr19_36648041_-ncRNA_intronic
CAediting_1341118chr19_36648043_-ncRNA_intronic
CAediting_1341119chr19_36648059_-ncRNA_intronic
CAediting_1341120chr19_36648069_-ncRNA_intronic
CAediting_1341121chr19_36648094_-ncRNA_intronic
CAediting_1341122chr19_36648098_-ncRNA_intronic
CAediting_1341123chr19_36648099_-ncRNA_intronic
CAediting_1341124chr19_36648116_-ncRNA_intronic
CAediting_1341125chr19_36648127_-ncRNA_intronic
CAediting_1341126chr19_36648133_-ncRNA_intronic
CAediting_1341127chr19_36648141_-ncRNA_intronic
CAediting_1341128chr19_36648145_-ncRNA_intronic
CAediting_1341129chr19_36648677_-ncRNA_intronic
CAediting_1341130chr19_36648682_-ncRNA_intronic
CAediting_1341131chr19_36648748_-ncRNA_intronic
CAediting_1341132chr19_36648749_-ncRNA_intronic
CAediting_1341133chr19_36654464_-ncRNA_intronic
CAediting_1341134chr19_36654490_-ncRNA_intronic
CAediting_1341135chr19_36654505_-ncRNA_intronic
CAediting_1341136chr19_36654532_-ncRNA_intronic
CAediting_1341137chr19_36654571_-ncRNA_intronic
CAediting_1341138chr19_36655031_-ncRNA_intronic
CAediting_1341139chr19_36655057_-ncRNA_intronic
CAediting_1341140chr19_36655061_-ncRNA_intronic
CAediting_1341141chr19_36655067_-ncRNA_intronic
CAediting_1341142chr19_36655126_-ncRNA_intronic
CAediting_1341143chr19_36655197_-ncRNA_intronic
CAediting_1341144chr19_36655223_-ncRNA_intronic
CAediting_1341145chr19_36655414_-ncRNA_intronic
CAediting_1341146chr19_36655536_-ncRNA_intronic
CAediting_1341147chr19_36655547_-ncRNA_intronic
CAediting_1341148chr19_36656136_-ncRNA_intronic
CAediting_1341149chr19_36656888_-ncRNA_intronic
CAediting_1341150chr19_36656896_-ncRNA_intronic
CAediting_1341151chr19_36656922_-ncRNA_intronic
CAediting_1341152chr19_36656944_-ncRNA_intronic
CAediting_1341153chr19_36656960_-ncRNA_intronic
CAediting_1341154chr19_36657047_-ncRNA_intronic
CAediting_1341155chr19_36657065_-ncRNA_intronic
CAediting_1341156chr19_36657692_-exonic
CAediting_1341157chr19_36657716_-exonic
CAediting_1341158chr19_36657747_-exonic
CAediting_1341159chr19_36657759_-ncRNA_intronic
CAediting_1341160chr19_36659523_-ncRNA_intronic
CAediting_1341161chr19_36663612_-ncRNA_intronic
CAediting_1341162chr19_36664422_-ncRNA_intronic
CAediting_1341163chr19_36665454_-ncRNA_intronic
CAediting_1341164chr19_36665466_-ncRNA_intronic
CAediting_1341165chr19_36665626_-ncRNA_intronic
CAediting_1341166chr19_36666162_-ncRNA_intronic
CAediting_1341167chr19_36666227_-ncRNA_intronic
CAediting_1341168chr19_36666232_-ncRNA_intronic
CAediting_1341169chr19_36666233_-ncRNA_intronic
CAediting_1341170chr19_36666251_-ncRNA_intronic
CAediting_1341171chr19_36666259_-ncRNA_intronic
CAediting_1341172chr19_36666267_-ncRNA_intronic
CAediting_1341173chr19_36666269_-ncRNA_intronic
CAediting_1341174chr19_36666272_-ncRNA_intronic
CAediting_1341175chr19_36666288_-ncRNA_intronic
CAediting_1341176chr19_36666291_-ncRNA_intronic
CAediting_1341177chr19_36666297_-ncRNA_intronic
CAediting_1341178chr19_36666318_-ncRNA_intronic
CAediting_1341179chr19_36666361_-ncRNA_intronic
CAediting_1341180chr19_36666366_-ncRNA_intronic
CAediting_1341181chr19_36666367_-ncRNA_intronic
CAediting_1341182chr19_36666375_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1341028chr19_36637195_-SINEAluAluY
CAediting_1341029chr19_36637254_-SINEAluAluY
CAediting_1341030chr19_36637262_-SINEAluAluY
CAediting_1341031chr19_36637269_-SINEAluAluY
CAediting_1341032chr19_36637270_-SINEAluAluY
CAediting_1341033chr19_36637284_-SINEAluAluY
CAediting_1341034chr19_36637293_-SINEAluAluY
CAediting_1341035chr19_36637305_-SINEAluAluY
CAediting_1341036chr19_36637325_-SINEAluAluY
CAediting_1341037chr19_36637329_-SINEAluAluY
CAediting_1341038chr19_36637335_-SINEAluAluY
CAediting_1341039chr19_36637361_-SINEAluAluY
CAediting_1341040chr19_36637370_-SINEAluAluY
CAediting_1341041chr19_36637472_-SINEAluAluY
CAediting_1341042chr19_36637473_-SINEAluAluY
CAediting_1341043chr19_36637495_-SINEAluAluY
CAediting_1341044chr19_36637587_-SINEAluAluSx3
CAediting_1341045chr19_36637640_-SINEAluAluSx3
CAediting_1341046chr19_36637651_-SINEAluAluSx3
CAediting_1341047chr19_36641302_-SINEAluAluSx1
CAediting_1341048chr19_36642082_-SINEAluAluJb
CAediting_1341049chr19_36642190_-SINEAluAluJb
CAediting_1341050chr19_36644206_-SINEAluAluSq2
CAediting_1341051chr19_36645206_-SINEAluAluJb
CAediting_1341052chr19_36645214_-SINEAluAluJb
CAediting_1341053chr19_36645807_-SINEAluAluSg
CAediting_1341054chr19_36645908_-SINEAluAluSg
CAediting_1341055chr19_36645909_-SINEAluAluSg
CAediting_1341056chr19_36645923_-SINEAluAluSg
CAediting_1341057chr19_36645984_-SINEAluAluSg
CAediting_1341058chr19_36646017_-SINEAluAluSg
CAediting_1341059chr19_36646055_-SINEAluAluSg
CAediting_1341060chr19_36646056_-SINEAluAluSg
CAediting_1341061chr19_36646074_-SINEAluAluSg
CAediting_1341062chr19_36646193_-SINEAluAluSq2
CAediting_1341063chr19_36646228_-SINEAluAluSq2
CAediting_1341064chr19_36646269_-SINEAluAluSq2
CAediting_1341065chr19_36646307_-SINEAluAluSq2
CAediting_1341066chr19_36646310_-SINEAluAluSq2
CAediting_1341067chr19_36646311_-SINEAluAluSq2
CAediting_1341068chr19_36646314_-SINEAluAluSq2
CAediting_1341069chr19_36646379_-SINEAluAluSq2
CAediting_1341070chr19_36646404_-SINEAluAluSq2
CAediting_1341071chr19_36646405_-SINEAluAluSq2
CAediting_1341072chr19_36646411_-SINEAluAluSq2
CAediting_1341073chr19_36646413_-SINEAluAluSq2
CAediting_1341074chr19_36646418_-SINEAluAluSq2
CAediting_1341075chr19_36647274_-SINEAluAluSx1
CAediting_1341076chr19_36647281_-SINEAluAluSx1
CAediting_1341077chr19_36647283_-SINEAluAluSx1
CAediting_1341078chr19_36647295_-SINEAluAluSx1
CAediting_1341079chr19_36647305_-SINEAluAluSx1
CAediting_1341080chr19_36647322_-SINEAluAluSx1
CAediting_1341081chr19_36647337_-SINEAluAluSx1
CAediting_1341082chr19_36647344_-SINEAluAluSx1
CAediting_1341083chr19_36647368_-SINEAluAluSx1
CAediting_1341084chr19_36647374_-SINEAluAluSx1
CAediting_1341085chr19_36647383_-SINEAluAluSx1
CAediting_1341086chr19_36647392_-SINEAluAluSx1
CAediting_1341087chr19_36647396_-SINEAluAluSx1
CAediting_1341088chr19_36647400_-SINEAluAluSx1
CAediting_1341089chr19_36647440_-SINEAluAluSx1
CAediting_1341090chr19_36647453_-SINEAluAluSx1
CAediting_1341091chr19_36647457_-SINEAluAluSx1
CAediting_1341092chr19_36647458_-SINEAluAluSx1
CAediting_1341093chr19_36647471_-SINEAluAluSx1
CAediting_1341094chr19_36647477_-SINEAluAluSx1
CAediting_1341095chr19_36647483_-SINEAluAluSx1
CAediting_1341096chr19_36647488_-SINEAluAluSx1
CAediting_1341097chr19_36647517_-SINEAluAluSx1
CAediting_1341098chr19_36647531_-SINEAluAluSx1
CAediting_1341099chr19_36647533_-SINEAluAluSx1
CAediting_1341100chr19_36647535_-SINEAluAluSx1
CAediting_1341101chr19_36647537_-SINEAluAluSx1
CAediting_1341102chr19_36647789_-LTRERVL-MaLRMSTA
CAediting_1341103chr19_36647798_-LTRERVL-MaLRMSTA
CAediting_1341104chr19_36647925_-SINEAluAluSq2
CAediting_1341105chr19_36647952_-SINEAluAluSq2
CAediting_1341106chr19_36647960_-SINEAluAluSq2
CAediting_1341107chr19_36647961_-SINEAluAluSq2
CAediting_1341108chr19_36647963_-SINEAluAluSq2
CAediting_1341109chr19_36647965_-SINEAluAluSq2
CAediting_1341110chr19_36647978_-SINEAluAluSq2
CAediting_1341111chr19_36647999_-SINEAluAluSq2
CAediting_1341112chr19_36648002_-SINEAluAluSq2
CAediting_1341113chr19_36648016_-SINEAluAluSq2
CAediting_1341114chr19_36648025_-SINEAluAluSq2
CAediting_1341115chr19_36648032_-SINEAluAluSq2
CAediting_1341116chr19_36648037_-SINEAluAluSq2
CAediting_1341117chr19_36648041_-SINEAluAluSq2
CAediting_1341118chr19_36648043_-SINEAluAluSq2
CAediting_1341119chr19_36648059_-SINEAluAluSq2
CAediting_1341120chr19_36648069_-SINEAluAluSq2
CAediting_1341121chr19_36648094_-SINEAluAluSq2
CAediting_1341122chr19_36648098_-SINEAluAluSq2
CAediting_1341123chr19_36648099_-SINEAluAluSq2
CAediting_1341124chr19_36648116_-SINEAluAluSq2
CAediting_1341125chr19_36648127_-SINEAluAluSq2
CAediting_1341126chr19_36648133_-SINEAluAluSq2
CAediting_1341127chr19_36648141_-SINEAluAluSq2
CAediting_1341128chr19_36648145_-SINEAluAluSq2
CAediting_1341129chr19_36648677_-SINEAluAluSz6
CAediting_1341130chr19_36648682_-SINEAluAluSz6
CAediting_1341131chr19_36648748_-SINEAluAluSz6
CAediting_1341132chr19_36648749_-SINEAluAluSz6
CAediting_1341133chr19_36654464_-SINEAluAluJb
CAediting_1341134chr19_36654490_-SINEAluAluJb
CAediting_1341135chr19_36654505_-SINEAluAluJb
CAediting_1341136chr19_36654532_-SINEAluAluJb
CAediting_1341137chr19_36654571_-SINEAluAluJb
CAediting_1341138chr19_36655031_-SINEAluAluJr
CAediting_1341139chr19_36655057_-SINEAluAluJr
CAediting_1341140chr19_36655061_-SINEAluAluJr
CAediting_1341141chr19_36655067_-SINEAluAluJr
CAediting_1341142chr19_36655126_-SINEAluAluJr
CAediting_1341143chr19_36655197_-SINEAluAluJr
CAediting_1341144chr19_36655223_-SINEAluAluJr
CAediting_1341145chr19_36655414_-SINEAluAluJr
CAediting_1341146chr19_36655536_-SINEAluAluJr
CAediting_1341147chr19_36655547_-SINEAluAluJr
CAediting_1341148chr19_36656136_-SINEAluAluYd8
CAediting_1341149chr19_36656888_-SINEAluAluSq2
CAediting_1341150chr19_36656896_-SINEAluAluSq2
CAediting_1341151chr19_36656922_-SINEAluAluSq2
CAediting_1341152chr19_36656944_-SINEAluAluSq2
CAediting_1341153chr19_36656960_-SINEAluAluSq2
CAediting_1341154chr19_36657047_-SINEAluAluSq2
CAediting_1341155chr19_36657065_-SINEAluAluSq2
CAediting_1341156chr19_36657692_-SINEAluAluSp
CAediting_1341157chr19_36657716_-SINEAluAluSp
CAediting_1341158chr19_36657747_-SINEAluAluSp
CAediting_1341159chr19_36657759_-SINEAluAluSp
CAediting_1341160chr19_36659523_-SINEAluFLAM_C
CAediting_1341161chr19_36663612_-SINEAluAluJr
CAediting_1341162chr19_36664422_-SINEAluAluSz6
CAediting_1341163chr19_36665454_-SINEAluAluSq4
CAediting_1341164chr19_36665466_-SINEAluAluSq4
CAediting_1341165chr19_36665626_-SINEAluAluSq4
CAediting_1341166chr19_36666162_-SINEAluAluSp
CAediting_1341167chr19_36666227_-SINEAluAluSp
CAediting_1341168chr19_36666232_-SINEAluAluSp
CAediting_1341169chr19_36666233_-SINEAluAluSp
CAediting_1341170chr19_36666251_-SINEAluAluSp
CAediting_1341171chr19_36666259_-SINEAluAluSp
CAediting_1341172chr19_36666267_-SINEAluAluSp
CAediting_1341173chr19_36666269_-SINEAluAluSp
CAediting_1341174chr19_36666272_-SINEAluAluSp
CAediting_1341175chr19_36666288_-SINEAluAluSp
CAediting_1341176chr19_36666291_-SINEAluAluSp
CAediting_1341177chr19_36666297_-SINEAluAluSp
CAediting_1341178chr19_36666318_-SINEAluAluSp
CAediting_1341179chr19_36666361_-SINEAluAluSp
CAediting_1341180chr19_36666366_-SINEAluAluSp
CAediting_1341181chr19_36666367_-SINEAluAluSp
CAediting_1341182chr19_36666375_-SINEAluAluSp

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RNA A-to-I editing events in the alternative splicing sites for ZNF461

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_1341036chr19_36637325_-36637314:366373363SS0+9iTAGTCCCAGCTACTCGGGAGGCT-12.77TAGTCCCAGCTGCTCGGGAGGCT-10.8
IRCAediting_1341037chr19_36637329_-36637314:366373363SS0+13iTAGTCCCAGCTACTCGGGAGGCT-12.77TAGTCCCGGCTACTCGGGAGGCT-9.64
IRCAediting_1341038chr19_36637335_-36637314:366373363SS0+19iTAGTCCCAGCTACTCGGGAGGCT-12.77TGGTCCCAGCTACTCGGGAGGCT-10.67
ESCAediting_1341159chr19_36657759_-36657748:366577703SS0+9iGTTTCGTTCTTATTGCCCAGGCT6.87GTTTCGTTCTTGTTGCCCAGGCT5.98

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000197808.10.ZNF461.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000197808.10.ZNF461.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF461

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
PCPG.CAediting_1341031.ENSG00000197808.ZNF461.png
Soverview

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Protein coding region RNA A-to-I editings for ZNF461

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for ZNF461

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1341031chr19_36637269_-ENSG00000197808.10ENST00000396893hsa-miR-24-1-5p36637267366372737mer-m83663726636637290149.00-19.06
CAediting_1341031chr19_36637269_-ENSG00000197808.10ENST00000396893hsa-miR-24-2-5p36637267366372737mer-m83663726636637289147.00-18.91
CAediting_1341032chr19_36637270_-ENSG00000197808.10ENST00000396893hsa-miR-1304-3p36637268366372747mer-m83663726736637288155.00-18.11
CAediting_1341044chr19_36637587_-ENSG00000197808.10ENST00000396893hsa-miR-4691-3p36637583366375897mer-m83663758236637609150.00-26.36
CAediting_1341033chr19_36637284_-ENSG00000197808.10ENST00000396893hsa-miR-1306-5p36637282366372887mer-m83663728136637302156.00-30.68
CAediting_1341034chr19_36637293_-ENSG00000197808.10ENST00000396893hsa-miR-3155a36637289366372957mer-m83663728836637309145.00-20.74
CAediting_1341034chr19_36637293_-ENSG00000197808.10ENST00000396893hsa-miR-3155b36637289366372957mer-m83663728836637306145.00-20.74
CAediting_1341034chr19_36637293_-ENSG00000197808.10ENST00000396893hsa-miR-428436637291366372977mer-m83663729036637307148.00-16.86
CAediting_1341034chr19_36637293_-ENSG00000197808.10ENST00000396893hsa-miR-48436637289366372957mer-m83663728836637309153.00-20.97
CAediting_1341036chr19_36637325_-ENSG00000197808.10ENST00000396893hsa-miR-1207-3p36637325366373317mer-m83663732436637342145.00-13.53
CAediting_1341036chr19_36637325_-ENSG00000197808.10ENST00000396893hsa-miR-64636637323366373297mer-m83663732236637341148.00-21.05
CAediting_1341038chr19_36637335_-ENSG00000197808.10ENST00000396893hsa-miR-140-3p36637333366373397mer-m83663733236637352155.00-23.48
CAediting_1341040chr19_36637370_-ENSG00000197808.10ENST00000396893hsa-miR-3680-3p36637365366373728mer-1a3663736536637387141.00-15.58
CAediting_1341040chr19_36637370_-ENSG00000197808.10ENST00000396893hsa-miR-3680-3p36637365366373728mer-1a3663736536637387141.00-15.58
CAediting_1341041chr19_36637472_-ENSG00000197808.10ENST00000396893hsa-miR-805236637467366374737mer-1a3663746736637485148.00-29.06
CAediting_1341042chr19_36637473_-ENSG00000197808.10ENST00000396893hsa-miR-513a-5p36637472366374787mer-m83663747136637488152.00-17.32
CAediting_1341042chr19_36637473_-ENSG00000197808.10ENST00000396893hsa-miR-513a-5p36637472366374787mer-m83663747136637488152.00-17.32
CAediting_1341042chr19_36637473_-ENSG00000197808.10ENST00000396893hsa-miR-63836637467366374737mer-1a3663746736637491155.00-34.38
CAediting_1341043chr19_36637495_-ENSG00000197808.10ENST00000396893hsa-miR-3940-3p36637491366374977mer-m83663749036637511140.00-18.34
CAediting_1341035chr19_36637305_-ENSG00000197808.10ENST00000396893hsa-miR-3059-5p36637302366373087mer-m83663730136637322149.00-16.96
CAediting_1341035chr19_36637305_-ENSG00000197808.10ENST00000396893hsa-miR-6728-3p36637305366373106mer3663730436637324146.00-27.31
CAediting_1341035chr19_36637305_-ENSG00000197808.10ENST00000396893hsa-miR-6780a-3p36637302366373098mer-1a3663730236637324157.00-22.25
CAediting_1341157chr19_36657716_-ENSG00000197808.10ENST00000590361hsa-miR-431-3p36657712366577187mer-m83665771136657734147.00-15.37
CAediting_1341157chr19_36657716_-ENSG00000197808.10ENST00000590361hsa-miR-444036657714366577207mer-m83665771336657732143.00-19.32

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1341041chr19_36637472_-ENSG00000197808.10ENST00000396893hsa-miR-10399-5p36637471366374777mer-m83663747036637491144-10.33
CAediting_1341042chr19_36637473_-ENSG00000197808.10ENST00000396893hsa-miR-10399-5p36637471366374777mer-m83663747036637491144-10.33
CAediting_1341046chr19_36637651_-ENSG00000197808.10ENST00000396893hsa-miR-25-3p36637649366376557mer-m83663764836637673150-21.41
CAediting_1341045chr19_36637640_-ENSG00000197808.10ENST00000396893hsa-miR-317436637638366376436mer3663763736637659147-22.07
CAediting_1341043chr19_36637495_-ENSG00000197808.10ENST00000396893hsa-miR-3190-5p36637494366375007mer-m83663749336637512143-16.24
CAediting_1341046chr19_36637651_-ENSG00000197808.10ENST00000396893hsa-miR-32-5p36637649366376557mer-m83663764836637672144-13.3
CAediting_1341046chr19_36637651_-ENSG00000197808.10ENST00000396893hsa-miR-363-3p36637649366376557mer-m83663764836637674150-18.88
CAediting_1341046chr19_36637651_-ENSG00000197808.10ENST00000396893hsa-miR-367-3p36637649366376557mer-m83663764836637669145-13.73
CAediting_1341035chr19_36637305_-ENSG00000197808.10ENST00000396893hsa-miR-4659a-3p36637302366373087mer-m83663730136637320143-10.85
CAediting_1341035chr19_36637305_-ENSG00000197808.10ENST00000396893hsa-miR-4659b-3p36637302366373087mer-m83663730136637320143-12.05
CAediting_1341030chr19_36637262_-ENSG00000197808.10ENST00000396893hsa-miR-4695-3p36637260366372667mer-m83663725936637282150-18.28
CAediting_1341033chr19_36637284_-ENSG00000197808.10ENST00000396893hsa-miR-4713-5p36637284366372907mer-m83663728336637304146-16.22
CAediting_1341039chr19_36637361_-ENSG00000197808.10ENST00000396893hsa-miR-4735-5p36637360366373667mer-m83663735936637380140-4.28
CAediting_1341041chr19_36637472_-ENSG00000197808.10ENST00000396893hsa-miR-5089-5p36637467366374737mer-m83663746636637485146-13.24
CAediting_1341043chr19_36637495_-ENSG00000197808.10ENST00000396893hsa-miR-548s36637495366375017mer-m83663749436637517148-11.22
CAediting_1341044chr19_36637587_-ENSG00000197808.10ENST00000396893hsa-miR-569036637583366375897mer-m83663758236637602145-17.72
CAediting_1341029chr19_36637254_-ENSG00000197808.10ENST00000396893hsa-miR-569336637251366372577mer-m83663725036637270146-18.07
CAediting_1341045chr19_36637640_-ENSG00000197808.10ENST00000396893hsa-miR-6807-5p36637640366376467mer-m83663763936637658147-17.11
CAediting_1341042chr19_36637473_-ENSG00000197808.10ENST00000396893hsa-miR-7151-3p36637472366374798mer-1a3663747236637488146-17.62
CAediting_1341038chr19_36637335_-ENSG00000197808.10ENST00000396893hsa-miR-7151-3p36637335366373417mer-m83663733436637354140-16.39
CAediting_1341033chr19_36637284_-ENSG00000197808.10ENST00000396893hsa-miR-7151-5p36637279366372857mer-m83663727836637300151-21.96
CAediting_1341046chr19_36637651_-ENSG00000197808.10ENST00000396893hsa-miR-92a-3p36637649366376557mer-m83663764836637673154-25.73
CAediting_1341046chr19_36637651_-ENSG00000197808.10ENST00000396893hsa-miR-92a-3p36637649366376557mer-m83663764836637673154-25.73
CAediting_1341046chr19_36637651_-ENSG00000197808.10ENST00000396893hsa-miR-92b-3p36637649366376557mer-m83663764836637673154-22.08
CAediting_1341156chr19_36657692_-ENSG00000197808.10ENST00000590361hsa-miR-219b-3p36657688366576947mer-m83665768736657707148-13
CAediting_1341156chr19_36657692_-ENSG00000197808.10ENST00000590361hsa-miR-302f36657689366576957mer-m83665768836657704145-7.03
CAediting_1341157chr19_36657716_-ENSG00000197808.10ENST00000590361hsa-miR-377-5p36657711366577177mer-m83665771036657727149-20.91
CAediting_1341157chr19_36657716_-ENSG00000197808.10ENST00000590361hsa-miR-608636657711366577177mer-m83665771036657729154-22.96

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_77128chr1_85133844_+ENSG00000197808.10ENST00000396893hsa-miR-4423-3p36656449366564557mer-m83665644836656468150-17.71
CAediting_1229415chr17_67471547_+ENSG00000197808.10ENST00000396893hsa-miR-548aa36639332366393376mer3663931836639346165-19.08
CAediting_1229415chr17_67471547_+ENSG00000197808.10ENST00000396893hsa-miR-548aa36639319366393257mer-m83663931836639346165-19.08
CAediting_86358chr1_109598906_+ENSG00000197808.10ENST00000396893hsa-miR-197-5p36637621366376277mer-1a3663762136637646142-34.07
CAediting_442554chr5_154685830_+ENSG00000197808.10ENST00000396893hsa-miR-130336640004366400118mer-1a3664000436640025150-17.86
CAediting_77128chr1_85133844_+ENSG00000197808.10ENST00000590361hsa-miR-4423-3p36656449366564557mer-m83665644836656468150-17.71
CAediting_77128chr1_85133844_+ENSG00000197808.10ENST00000588844hsa-miR-4423-3p36656449366564557mer-m83665644836656468150-17.71
CAediting_468389chr6_31355314_-ENSG00000197808.10ENST00000396893hsa-miR-6891-5p36638680366386856mer3663867936638697140-20.67

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_604450chr7_133034877_-ENSG00000197808.10ENST00000396893hsa-miR-365436637657366376637mer-m83663765636637676144-19.7

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF461

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for ZNF461

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LGGCAediting_1341031chr19_36637269_-0.009287696656236810.1872899435751097.31097381697753e-050.282219338940590.0002501899139618780.261384103412102
BRCACAediting_1341031chr19_36637269_-1.8053316440383e-080.375517261687987....
KIRCCAediting_1341031chr19_36637269_-0.009303802052678910.302442760835871....
OVCAediting_1341031chr19_36637269_-1.94989828541704e-060.286957502747549....
SARCCAediting_1341031chr19_36637269_-0.01151412826884570.351166588557385....
LUSCCAediting_1341032chr19_36637270_-0.01924535709312930.330043784567187....
OVCAediting_1341032chr19_36637270_-0.01987503520736550.140882042209795....
LGGCAediting_1341044chr19_36637587_-..5.8884133742858e-050.3962015009082890.002065272015727260.309105090597816
GBMCAediting_1341044chr19_36637587_-0.03134324776387170.273717486518363....
THCACAediting_1341044chr19_36637587_-0.00530626444416350.305168717439183....
LGGCAediting_1341046chr19_36637651_-0.01748057948134530.223210274847277....
GBMCAediting_1341046chr19_36637651_-0.02909477219773880.297169114994656....

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Relation with cancer stages for ZNF461

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KIRCpathologic_stageCAediting_1341031chr19_36637269_-0.02327705887771250.265349735922993
OVclinical_stageCAediting_1341032chr19_36637270_-0.0176316890903666-0.143813716659545
OVclinical_stageCAediting_1341044chr19_36637587_-0.0442896791831430.203654331023885

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Relation with survival for ZNF461

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ZNF461

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ZNF461

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource