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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: VAPA (CAeditome ID:9218) |
Gene summary for VAPA |
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Gene information | Gene symbol | VAPA | Gene ID | 9218 |
Gene name | VAMP associated protein A | |
Synonyms | VAMP-A|VAP-33|VAP-A|VAP33|hVAP-33 | |
Cytomap | 18p11.22 | |
Type of gene | protein-coding | |
Description | vesicle-associated membrane protein-associated protein A33 kDa VAMP-associated proteinVAMP (vesicle-associated membrane protein)-associated protein A, 33kDaepididymis secretory sperm binding protein | |
Modification date | 20210518 | |
UniProtAcc | Q9P0L0 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
VAPA | GO:0070971 | Vesicle-associated membrane protein-associated protein A | 18713837 |
VAPA | GO:0005923 | Vesicle-associated membrane protein-associated protein A | 10523508 |
VAPA | GO:0048471 | Vesicle-associated membrane protein-associated protein A | 16895911 |
VAPA | GO:0044791 | Vesicle-associated membrane protein-associated protein A | 19515777 |
VAPA | GO:0044828 | Vesicle-associated membrane protein-associated protein A | 19515777 |
VAPA | GO:0044829 | Vesicle-associated membrane protein-associated protein A | 19515777 |
VAPA | GO:0005783 | Vesicle-associated membrane protein-associated protein A | 0000052 |
VAPA | GO:0005783 | Vesicle-associated membrane protein-associated protein A | 18713837 |
VAPA | GO:0005783 | Vesicle-associated membrane protein-associated protein A | 19289470 |
VAPA | GO:0005789 | Vesicle-associated membrane protein-associated protein A | 30741634 |
VAPA | GO:0005886 | Vesicle-associated membrane protein-associated protein A | 10523508 |
VAPA | GO:0031982 | Vesicle-associated membrane protein-associated protein A | 10523508 |
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RNA A-to-I events for VAPA |
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CAediting_1253195(9922812, +), CAediting_1253196(9931851, +), CAediting_1253197(9931878, +), CAediting_1253198(9931890, +), CAediting_1253199(9932987, +), CAediting_1253200(9933026, +), CAediting_1253201(9933027, +), CAediting_1253202(9933028, +), CAediting_1253203(9933561, +), CAediting_1253204(9933607, +), CAediting_1253205(9933655, +), CAediting_1253206(9933671, +), CAediting_1253207(9933718, +), CAediting_1253208(9933790, +), CAediting_1253209(9933800, +), CAediting_1253210(9933801, +), CAediting_1253211(9933812, +), CAediting_1253212(9933814, +), CAediting_1253213(9934937, +), CAediting_1253214(9934980, +), CAediting_1253215(9935477, +), CAediting_1253216(9935494, +), CAediting_1253217(9935514, +), CAediting_1253218(9935516, +), CAediting_1253219(9936502, +), CAediting_1253220(9936640, +), CAediting_1253221(9936707, +), CAediting_1253222(9936716, +), CAediting_1253223(9936729, +), CAediting_1253224(9948839, +), CAediting_1253225(9952521, +), CAediting_1253226(9954092, +), CAediting_1253227(9954093, +), CAediting_1253228(9954104, +), CAediting_1253229(9954362, +), CAediting_1253230(9954368, +), CAediting_1253231(9954442, +), CAediting_1253232(9957075, +), CAediting_1253233(9957149, +), CAediting_1253234(9957212, +), CAediting_1253235(9957215, +), CAediting_1253236(9957297, +), |
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RNA editing positional annotations for VAPA using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
CAediting_1253196 | chr18_9931851_+ | nonsynonymous SNV | ENST00000340541.4 | c.A121G | p.N41D | D | D | D |
CAediting_1253196 | chr18_9931851_+ | nonsynonymous SNV | ENST00000400000.5 | c.A121G | p.N41D | D | D | D |
CAediting_1253197 | chr18_9931878_+ | nonsynonymous SNV | ENST00000340541.4 | c.A148G | p.K50E | D | D | D |
CAediting_1253197 | chr18_9931878_+ | nonsynonymous SNV | ENST00000400000.5 | c.A148G | p.K50E | D | D | D |
CAediting_1253198 | chr18_9931890_+ | nonsynonymous SNV | ENST00000340541.4 | c.A160G | p.T54A | D | D | D |
CAediting_1253198 | chr18_9931890_+ | nonsynonymous SNV | ENST00000400000.5 | c.A160G | p.T54A | D | D | D |
CAediting_1253226 | chr18_9954092_+ | nonsynonymous SNV | ENST00000340541.4 | c.A766G | p.K256E | T | D | N |
CAediting_1253226 | chr18_9954092_+ | nonsynonymous SNV | ENST00000400000.5 | c.A631G | p.K211E | T | D | N |
CAediting_1253227 | chr18_9954093_+ | nonsynonymous SNV | ENST00000340541.4 | c.A767G | p.K256R | T | D | N |
CAediting_1253227 | chr18_9954093_+ | nonsynonymous SNV | ENST00000400000.5 | c.A632G | p.K211R | T | D | N |
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CAeditome ID | Position | Variant type |
CAediting_1253195 | chr18_9922812_+ | ncRNA_intronic |
CAediting_1253196 | chr18_9931851_+ | exonic |
CAediting_1253197 | chr18_9931878_+ | exonic |
CAediting_1253198 | chr18_9931890_+ | exonic |
CAediting_1253199 | chr18_9932987_+ | ncRNA_intronic |
CAediting_1253200 | chr18_9933026_+ | ncRNA_intronic |
CAediting_1253201 | chr18_9933027_+ | ncRNA_intronic |
CAediting_1253202 | chr18_9933028_+ | ncRNA_intronic |
CAediting_1253203 | chr18_9933561_+ | ncRNA_intronic |
CAediting_1253204 | chr18_9933607_+ | ncRNA_intronic |
CAediting_1253205 | chr18_9933655_+ | ncRNA_intronic |
CAediting_1253206 | chr18_9933671_+ | ncRNA_intronic |
CAediting_1253207 | chr18_9933718_+ | ncRNA_intronic |
CAediting_1253208 | chr18_9933790_+ | ncRNA_intronic |
CAediting_1253209 | chr18_9933800_+ | ncRNA_intronic |
CAediting_1253210 | chr18_9933801_+ | ncRNA_intronic |
CAediting_1253211 | chr18_9933812_+ | ncRNA_intronic |
CAediting_1253212 | chr18_9933814_+ | ncRNA_intronic |
CAediting_1253213 | chr18_9934937_+ | ncRNA_intronic |
CAediting_1253214 | chr18_9934980_+ | ncRNA_intronic |
CAediting_1253215 | chr18_9935477_+ | ncRNA_intronic |
CAediting_1253216 | chr18_9935494_+ | ncRNA_intronic |
CAediting_1253217 | chr18_9935514_+ | ncRNA_intronic |
CAediting_1253218 | chr18_9935516_+ | ncRNA_intronic |
CAediting_1253219 | chr18_9936502_+ | ncRNA_exonic |
CAediting_1253220 | chr18_9936640_+ | ncRNA_intronic |
CAediting_1253221 | chr18_9936707_+ | ncRNA_intronic |
CAediting_1253222 | chr18_9936716_+ | ncRNA_intronic |
CAediting_1253223 | chr18_9936729_+ | ncRNA_exonic |
CAediting_1253224 | chr18_9948839_+ | ncRNA_exonic |
CAediting_1253225 | chr18_9952521_+ | ncRNA_intronic |
CAediting_1253226 | chr18_9954092_+ | exonic |
CAediting_1253227 | chr18_9954093_+ | exonic |
CAediting_1253228 | chr18_9954104_+ | exonic |
CAediting_1253229 | chr18_9954362_+ | ncRNA_exonic |
CAediting_1253230 | chr18_9954368_+ | ncRNA_exonic |
CAediting_1253231 | chr18_9954442_+ | ncRNA_exonic |
CAediting_1253232 | chr18_9957075_+ | UTR3 |
CAediting_1253233 | chr18_9957149_+ | UTR3 |
CAediting_1253234 | chr18_9957212_+ | UTR3 |
CAediting_1253235 | chr18_9957215_+ | UTR3 |
CAediting_1253236 | chr18_9957297_+ | UTR3 |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1253199 | chr18_9932987_+ | SINE | Alu | AluSg7 |
CAediting_1253200 | chr18_9933026_+ | SINE | Alu | AluSg7 |
CAediting_1253201 | chr18_9933027_+ | SINE | Alu | AluSg7 |
CAediting_1253202 | chr18_9933028_+ | SINE | Alu | AluSg7 |
CAediting_1253203 | chr18_9933561_+ | SINE | Alu | AluSz |
CAediting_1253204 | chr18_9933607_+ | SINE | Alu | AluSz |
CAediting_1253205 | chr18_9933655_+ | SINE | Alu | AluSz |
CAediting_1253206 | chr18_9933671_+ | SINE | Alu | AluSz |
CAediting_1253207 | chr18_9933718_+ | SINE | Alu | AluSz |
CAediting_1253208 | chr18_9933790_+ | SINE | Alu | AluSz |
CAediting_1253209 | chr18_9933800_+ | SINE | Alu | AluSz |
CAediting_1253210 | chr18_9933801_+ | SINE | Alu | AluSz |
CAediting_1253211 | chr18_9933812_+ | SINE | Alu | AluSz |
CAediting_1253212 | chr18_9933814_+ | SINE | Alu | AluSz |
CAediting_1253213 | chr18_9934937_+ | SINE | Alu | AluY |
CAediting_1253214 | chr18_9934980_+ | SINE | Alu | AluY |
CAediting_1253215 | chr18_9935477_+ | SINE | Alu | AluJb |
CAediting_1253216 | chr18_9935494_+ | SINE | Alu | AluJb |
CAediting_1253217 | chr18_9935514_+ | SINE | Alu | AluJb |
CAediting_1253218 | chr18_9935516_+ | SINE | Alu | AluJb |
CAediting_1253219 | chr18_9936502_+ | SINE | Alu | AluJo |
CAediting_1253220 | chr18_9936640_+ | SINE | Alu | AluJo |
CAediting_1253221 | chr18_9936707_+ | SINE | Alu | AluJo |
CAediting_1253222 | chr18_9936716_+ | SINE | Alu | AluJo |
CAediting_1253223 | chr18_9936729_+ | SINE | Alu | AluJo |
CAediting_1253224 | chr18_9948839_+ | SINE | Alu | AluJr |
CAediting_1253225 | chr18_9952521_+ | SINE | Alu | AluSq2 |
CAediting_1253232 | chr18_9957075_+ | SINE | Alu | AluSg |
CAediting_1253233 | chr18_9957149_+ | SINE | Alu | AluSg |
CAediting_1253234 | chr18_9957212_+ | SINE | Alu | AluSg |
CAediting_1253235 | chr18_9957215_+ | SINE | Alu | AluSg |
CAediting_1253236 | chr18_9957297_+ | SINE | Alu | AluSg |
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RNA A-to-I editing events in the alternative splicing sites for VAPA |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
IR | CAediting_1253236 | chr18_9957297_+ | 9957280:9957302 | 3SS | 0+3i | CCCAAAGTGCTGGGATTACAGGT | -18.22 | CCCAAAGTGCTGGGATTGCAGGT | -30.13 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for VAPA |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for VAPA |
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The effects of the RNA editing to the miRNA binding sites for VAPA |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1253198 | chr18_9931890_+ | ENSG00000101558.12 | ENST00000585042 | hsa-miR-1205 | 9931887 | 9931892 | 6mer | 9931874 | 9931893 | 142.00 | -20.58 |
CAediting_1253198 | chr18_9931890_+ | ENSG00000101558.12 | ENST00000585042 | hsa-miR-17-3p | 9931886 | 9931892 | 7mer-m8 | 9931874 | 9931893 | 143.00 | -16.81 |
CAediting_1253232 | chr18_9957075_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-3940-3p | 9957072 | 9957078 | 7mer-m8 | 9957058 | 9957079 | 147.00 | -21.55 |
CAediting_1253233 | chr18_9957149_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-1199-3p | 9957147 | 9957153 | 7mer-m8 | 9957135 | 9957154 | 143.00 | -19.95 |
CAediting_1253233 | chr18_9957149_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-615-3p | 9957143 | 9957149 | 7mer-m8 | 9957128 | 9957150 | 158.00 | -22.90 |
CAediting_1253236 | chr18_9957297_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-106a-3p | 9957293 | 9957298 | 6mer | 9957278 | 9957299 | 141.00 | -21.13 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1253233 | chr18_9957149_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-1199-5p | 9957143 | 9957149 | 7mer-m8 | 9957130 | 9957150 | 141 | -18.19 |
CAediting_1253232 | chr18_9957075_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-3187-5p | 9957069 | 9957075 | 7mer-m8 | 9957051 | 9957076 | 149 | -27.17 |
CAediting_1253233 | chr18_9957149_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-4663 | 9957144 | 9957150 | 7mer-m8 | 9957131 | 9957151 | 149 | -18.25 |
CAediting_1253231 | chr18_9954442_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-489-3p | 9954435 | 9954441 | 7mer-m8 | 9954421 | 9954442 | 141 | -9.63 |
CAediting_1253232 | chr18_9957075_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-5189-5p | 9957069 | 9957075 | 7mer-m8 | 9957054 | 9957076 | 148 | -23.73 |
CAediting_1253235 | chr18_9957215_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-593-3p | 9957214 | 9957220 | 7mer-1a | 9957202 | 9957220 | 140 | -19.02 |
CAediting_1253232 | chr18_9957075_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-612 | 9957069 | 9957075 | 7mer-m8 | 9957052 | 9957076 | 146 | -21.15 |
CAediting_1253232 | chr18_9957075_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-661 | 9957071 | 9957077 | 7mer-m8 | 9957055 | 9957078 | 142 | -19.39 |
CAediting_1253233 | chr18_9957149_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-6751-3p | 9957143 | 9957149 | 7mer-m8 | 9957130 | 9957150 | 140 | -13.22 |
CAediting_1253233 | chr18_9957149_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-6807-5p | 9957142 | 9957148 | 7mer-m8 | 9957128 | 9957149 | 155 | -16.36 |
CAediting_1253232 | chr18_9957075_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-6860 | 9957069 | 9957075 | 7mer-m8 | 9957056 | 9957076 | 142 | -17.44 |
CAediting_1253232 | chr18_9957075_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-939-3p | 9957070 | 9957076 | 7mer-m8 | 9957057 | 9957077 | 140 | -15.63 |
CAediting_1253198 | chr18_9931890_+ | ENSG00000101558.12 | ENST00000585042 | hsa-miR-20b-3p | 9931886 | 9931892 | 7mer-m8 | 9931874 | 9931893 | 151 | -16.17 |
CAediting_1253196 | chr18_9931851_+ | ENSG00000101558.12 | ENST00000585042 | hsa-miR-3167 | 9931848 | 9931855 | 8mer-1a | 9931834 | 9931855 | 148 | -9.5 |
CAediting_1253197 | chr18_9931878_+ | ENSG00000101558.12 | ENST00000585042 | hsa-miR-510-3p | 9931872 | 9931879 | 8mer-1a | 9931858 | 9931879 | 143 | -7.78 |
CAediting_1253196 | chr18_9931851_+ | ENSG00000101558.12 | ENST00000585042 | hsa-miR-876-5p | 9931848 | 9931855 | 8mer-1a | 9931830 | 9931855 | 144 | -11.92 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229414 | chr17_67471546_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-548aa | 9959314 | 9959321 | 8mer-1a | 9959298 | 9959321 | 157 | -10.38 |
CAediting_1351755 | chr19_40282625_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-641 | 9956191 | 9956197 | 7mer-1a | 9956175 | 9956197 | 140 | -19.28 |
CAediting_524911 | chr7_5495852_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-589-3p | 9956571 | 9956578 | 8mer-1a | 9956555 | 9956578 | 149 | -17.6 |
CAediting_573001 | chr7_92204086_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-1285-5p | 9956587 | 9956593 | 7mer-m8 | 9956574 | 9956594 | 146 | -18.64 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_573001 | chr7_92204086_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-1285-5p | 9957824 | 9957830 | 7mer-m8 | 9957811 | 9957831 | 145 | -13.26 |
CAediting_1160181 | chr17_7017644_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-195-3p | 9959214 | 9959221 | 8mer-1a | 9959198 | 9959221 | 148 | -10.36 |
CAediting_393 | chr1_1167164_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-200b-3p | 9958882 | 9958889 | 8mer-1a | 9958868 | 9958889 | 140 | -9.82 |
CAediting_393 | chr1_1167164_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-200b-3p | 9954930 | 9954936 | 7mer-m8 | 9954918 | 9954937 | 144 | -8.07 |
CAediting_1368054 | chr19_46709310_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-320e | 9958191 | 9958198 | 8mer-1a | 9958181 | 9958198 | 147 | -14.02 |
CAediting_688080 | chr9_63819626_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-4477b | 9956895 | 9956900 | 6mer | 9956879 | 9956901 | 140 | -11.82 |
CAediting_688081 | chr9_63819627_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-4477b | 9956895 | 9956900 | 6mer | 9956879 | 9956901 | 140 | -11.82 |
CAediting_688080 | chr9_63819626_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-4477b | 9959896 | 9959902 | 7mer-m8 | 9959878 | 9959903 | 155 | -12.83 |
CAediting_688081 | chr9_63819627_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-4477b | 9959896 | 9959902 | 7mer-m8 | 9959878 | 9959903 | 155 | -12.83 |
CAediting_414656 | chr5_72878640_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-4804-3p | 9957763 | 9957770 | 8mer-1a | 9957750 | 9957770 | 140 | -9.21 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-548aa | 9954496 | 9954503 | 8mer-1a | 9954479 | 9954503 | 155 | -11.66 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-548aa | 9954496 | 9954503 | 8mer-1a | 9954479 | 9954503 | 155 | -11.66 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-548aa | 9954496 | 9954503 | 8mer-1a | 9954479 | 9954503 | 155 | -11.66 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-548aa | 9955171 | 9955178 | 8mer-1a | 9955154 | 9955178 | 145 | -6.07 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-548aa | 9955171 | 9955178 | 8mer-1a | 9955154 | 9955178 | 145 | -6.07 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-548aa | 9955171 | 9955178 | 8mer-1a | 9955154 | 9955178 | 145 | -6.07 |
CAediting_117844 | chr1_162342605_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-556-3p | 9955304 | 9955310 | 7mer-m8 | 9955290 | 9955311 | 150 | -10.72 |
CAediting_117844 | chr1_162342605_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-556-3p | 9956427 | 9956434 | 8mer-1a | 9956413 | 9956434 | 147 | -7.59 |
CAediting_228905 | chr2_188297554_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-561-3p | 9957677 | 9957684 | 8mer-1a | 9957666 | 9957684 | 152 | -6.78 |
CAediting_228905 | chr2_188297554_+ | ENSG00000101558.12 | ENST00000400000 | hsa-miR-561-3p | 9959857 | 9959863 | 7mer-m8 | 9959845 | 9959864 | 149 | -9.73 |
CAediting_524911 | chr7_5495852_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-589-3p | 9956940 | 9956947 | 8mer-1a | 9956921 | 9956947 | 154 | -14.98 |
CAediting_1351755 | chr19_40282625_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-641 | 9959298 | 9959304 | 7mer-m8 | 9959282 | 9959305 | 148 | -11.42 |
CAediting_468389 | chr6_31355314_- | ENSG00000101558.12 | ENST00000400000 | hsa-miR-6891-5p | 9954681 | 9954687 | 7mer-m8 | 9954670 | 9954688 | 148 | -14.79 |
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The effects of the RNA editing to the stability of the RNA structures for VAPA |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for VAPA |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for VAPA |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for VAPA |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for VAPA |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for VAPA |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
VAPA | C0005586 | Bipolar Disorder | 1 | PSYGENET |