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Editing gene: ZMYM6 (CAeditome ID:9204)

Gene summary for ZMYM6

Gene summary

Gene information	Gene symbol	ZMYM6
	Gene ID	9204
	Gene name	zinc finger MYM-type containing 6
	Synonyms	Buster2\|MYM\|ZBED7\|ZNF198L4\|ZNF258
	Cytomap	1p34.3
	Type of gene	protein-coding
	Description	zinc finger MYM-type protein 6transposon-derived Buster2 transposase-like proteinzinc finger protein 258zinc finger, BED-type containing 7zinc finger, MYM-type 6
	Modification date	20210518
	UniProtAcc	O95789
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZMYM6

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000163867.15

RNA A-to-I editing events in Cancer.

CAediting_43006(34986277, -), CAediting_43007(34986451, -), CAediting_43008(34986454, -), CAediting_43009(34986466, -), CAediting_43010(34986493, -), CAediting_43011(34986519, -), CAediting_43012(34986526, -), CAediting_43013(34986541, -), CAediting_43014(34986543, -), CAediting_43015(34986545, -), CAediting_43016(34986582, -), CAediting_43017(34986586, -), CAediting_43018(34986588, -), CAediting_43019(34986598, -), CAediting_43020(34986601, -), CAediting_43021(34986602, -), CAediting_43022(34986624, -), CAediting_43023(34986626, -), CAediting_43024(34986627, -), CAediting_43025(34989290, -), CAediting_43026(34989293, -), CAediting_43027(34989321, -), CAediting_43028(34989333, -), CAediting_43029(34989455, -), CAediting_43030(34989778, -), CAediting_43031(34989817, -), CAediting_43032(34989837, -), CAediting_43033(34989858, -), CAediting_43034(34989887, -), CAediting_43035(34990274, -), CAediting_43036(34990275, -), CAediting_43037(34990288, -), CAediting_43038(34990297, -), CAediting_43039(34990299, -), CAediting_43040(34990304, -), CAediting_43041(34990313, -), CAediting_43042(34990316, -), CAediting_43043(34990322, -), CAediting_43044(34990335, -), CAediting_43045(34990477, -), CAediting_43046(34991145, -), CAediting_43047(34993196, -), CAediting_43048(34993208, -), CAediting_43049(34993236, -), CAediting_43050(34993244, -), CAediting_43051(34993286, -), CAediting_43052(34993378, -), CAediting_43053(34993384, -), CAediting_43054(34994883, -), CAediting_43055(34995240, -), CAediting_43056(34995257, -), CAediting_43057(34995260, -), CAediting_43058(34995274, -), CAediting_43059(34998226, -), CAediting_43060(34998268, -), CAediting_43061(34998930, -), CAediting_43062(34999001, -), CAediting_43063(34999070, -), CAediting_43064(34999118, -), CAediting_43065(35000129, -), CAediting_43066(35000163, -), CAediting_43067(35000168, -), CAediting_43068(35003007, -), CAediting_43069(35003067, -), CAediting_43070(35003083, -), CAediting_43071(35013905, -), CAediting_43072(35013957, -), CAediting_43073(35014358, -), CAediting_43074(35014411, -), CAediting_43075(35015469, -), CAediting_43076(35015496, -), CAediting_43077(35015532, -), CAediting_43078(35015551, -), CAediting_43079(35015558, -), CAediting_43080(35015561, -), CAediting_43081(35015567, -), CAediting_43082(35015576, -), CAediting_43083(35015986, -), CAediting_43084(35016020, -), CAediting_43085(35016024, -), CAediting_43086(35016037, -), CAediting_43087(35016040, -), CAediting_43088(35016044, -), CAediting_43089(35016045, -), CAediting_43090(35016056, -), CAediting_43091(35016059, -), CAediting_43092(35016061, -), CAediting_43093(35016063, -), CAediting_43094(35016084, -), CAediting_43095(35016099, -), CAediting_43096(35016107, -), CAediting_43097(35016119, -), CAediting_43098(35016120, -), CAediting_43099(35016121, -), CAediting_43100(35016124, -), CAediting_43101(35016126, -), CAediting_43102(35016127, -), CAediting_43103(35016128, -), CAediting_43104(35016129, -), CAediting_43105(35016130, -), CAediting_43106(35016144, -), CAediting_43107(35016145, -), CAediting_43108(35016146, -), CAediting_43109(35016155, -), CAediting_43110(35016167, -), CAediting_43111(35016169, -), CAediting_43112(35016183, -), CAediting_43113(35016195, -), CAediting_43114(35016215, -), CAediting_43115(35016221, -), CAediting_43116(35016222, -), CAediting_43117(35016230, -), CAediting_43118(35016943, -), CAediting_43119(35016953, -), CAediting_43120(35018110, -), CAediting_43121(35018142, -), CAediting_43122(35025059, -), CAediting_43123(35029148, -), CAediting_43124(35030375, -),

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RNA editing positional annotations for ZMYM6 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_43006	chr1_34986277_-	ncRNA_exonic
CAediting_43007	chr1_34986451_-	ncRNA_exonic
CAediting_43008	chr1_34986454_-	ncRNA_exonic
CAediting_43009	chr1_34986466_-	ncRNA_exonic
CAediting_43010	chr1_34986493_-	ncRNA_exonic
CAediting_43011	chr1_34986519_-	ncRNA_exonic
CAediting_43012	chr1_34986526_-	ncRNA_exonic
CAediting_43013	chr1_34986541_-	ncRNA_exonic
CAediting_43014	chr1_34986543_-	ncRNA_exonic
CAediting_43015	chr1_34986545_-	ncRNA_exonic
CAediting_43016	chr1_34986582_-	ncRNA_exonic
CAediting_43017	chr1_34986586_-	ncRNA_exonic
CAediting_43018	chr1_34986588_-	ncRNA_exonic
CAediting_43019	chr1_34986598_-	ncRNA_exonic
CAediting_43020	chr1_34986601_-	ncRNA_exonic
CAediting_43021	chr1_34986602_-	ncRNA_exonic
CAediting_43022	chr1_34986624_-	ncRNA_exonic
CAediting_43023	chr1_34986626_-	ncRNA_exonic
CAediting_43024	chr1_34986627_-	ncRNA_exonic
CAediting_43025	chr1_34989290_-	ncRNA_exonic
CAediting_43026	chr1_34989293_-	ncRNA_exonic
CAediting_43027	chr1_34989321_-	ncRNA_exonic
CAediting_43028	chr1_34989333_-	ncRNA_exonic
CAediting_43029	chr1_34989455_-	ncRNA_exonic
CAediting_43030	chr1_34989778_-	ncRNA_exonic
CAediting_43031	chr1_34989817_-	ncRNA_exonic
CAediting_43032	chr1_34989837_-	ncRNA_exonic
CAediting_43033	chr1_34989858_-	ncRNA_exonic
CAediting_43034	chr1_34989887_-	ncRNA_exonic
CAediting_43035	chr1_34990274_-	ncRNA_exonic
CAediting_43036	chr1_34990275_-	ncRNA_exonic
CAediting_43037	chr1_34990288_-	ncRNA_exonic
CAediting_43038	chr1_34990297_-	ncRNA_exonic
CAediting_43039	chr1_34990299_-	ncRNA_exonic
CAediting_43040	chr1_34990304_-	ncRNA_exonic
CAediting_43041	chr1_34990313_-	ncRNA_splicing
CAediting_43042	chr1_34990316_-	ncRNA_intronic
CAediting_43043	chr1_34990322_-	ncRNA_intronic
CAediting_43044	chr1_34990335_-	ncRNA_intronic
CAediting_43045	chr1_34990477_-	ncRNA_intronic
CAediting_43046	chr1_34991145_-	ncRNA_intronic
CAediting_43047	chr1_34993196_-	ncRNA_intronic
CAediting_43048	chr1_34993208_-	ncRNA_intronic
CAediting_43049	chr1_34993236_-	ncRNA_intronic
CAediting_43050	chr1_34993244_-	ncRNA_intronic
CAediting_43051	chr1_34993286_-	ncRNA_intronic
CAediting_43052	chr1_34993378_-	ncRNA_intronic
CAediting_43053	chr1_34993384_-	ncRNA_intronic
CAediting_43054	chr1_34994883_-	ncRNA_intronic
CAediting_43055	chr1_34995240_-	ncRNA_intronic
CAediting_43056	chr1_34995257_-	ncRNA_intronic
CAediting_43057	chr1_34995260_-	ncRNA_intronic
CAediting_43058	chr1_34995274_-	ncRNA_intronic
CAediting_43059	chr1_34998226_-	ncRNA_intronic
CAediting_43060	chr1_34998268_-	ncRNA_intronic
CAediting_43061	chr1_34998930_-	ncRNA_intronic
CAediting_43062	chr1_34999001_-	ncRNA_intronic
CAediting_43063	chr1_34999070_-	ncRNA_intronic
CAediting_43064	chr1_34999118_-	ncRNA_intronic
CAediting_43065	chr1_35000129_-	ncRNA_intronic
CAediting_43066	chr1_35000163_-	ncRNA_intronic
CAediting_43067	chr1_35000168_-	ncRNA_intronic
CAediting_43068	chr1_35003007_-	ncRNA_intronic
CAediting_43069	chr1_35003067_-	ncRNA_intronic
CAediting_43070	chr1_35003083_-	ncRNA_intronic
CAediting_43071	chr1_35013905_-	ncRNA_intronic
CAediting_43072	chr1_35013957_-	ncRNA_intronic
CAediting_43073	chr1_35014358_-	ncRNA_intronic
CAediting_43074	chr1_35014411_-	ncRNA_intronic
CAediting_43075	chr1_35015469_-	ncRNA_intronic
CAediting_43076	chr1_35015496_-	ncRNA_intronic
CAediting_43077	chr1_35015532_-	ncRNA_intronic
CAediting_43078	chr1_35015551_-	ncRNA_intronic
CAediting_43079	chr1_35015558_-	ncRNA_intronic
CAediting_43080	chr1_35015561_-	ncRNA_intronic
CAediting_43081	chr1_35015567_-	ncRNA_intronic
CAediting_43082	chr1_35015576_-	ncRNA_intronic
CAediting_43083	chr1_35015986_-	ncRNA_intronic
CAediting_43084	chr1_35016020_-	ncRNA_intronic
CAediting_43085	chr1_35016024_-	ncRNA_intronic
CAediting_43086	chr1_35016037_-	ncRNA_intronic
CAediting_43087	chr1_35016040_-	ncRNA_intronic
CAediting_43088	chr1_35016044_-	ncRNA_intronic
CAediting_43089	chr1_35016045_-	ncRNA_intronic
CAediting_43090	chr1_35016056_-	ncRNA_intronic
CAediting_43091	chr1_35016059_-	ncRNA_intronic
CAediting_43092	chr1_35016061_-	ncRNA_intronic
CAediting_43093	chr1_35016063_-	ncRNA_intronic
CAediting_43094	chr1_35016084_-	ncRNA_intronic
CAediting_43095	chr1_35016099_-	ncRNA_intronic
CAediting_43096	chr1_35016107_-	ncRNA_intronic
CAediting_43097	chr1_35016119_-	ncRNA_intronic
CAediting_43098	chr1_35016120_-	ncRNA_intronic
CAediting_43099	chr1_35016121_-	ncRNA_intronic
CAediting_43100	chr1_35016124_-	ncRNA_intronic
CAediting_43101	chr1_35016126_-	ncRNA_intronic
CAediting_43102	chr1_35016127_-	ncRNA_intronic
CAediting_43103	chr1_35016128_-	ncRNA_intronic
CAediting_43104	chr1_35016129_-	ncRNA_intronic
CAediting_43105	chr1_35016130_-	ncRNA_intronic
CAediting_43106	chr1_35016144_-	ncRNA_intronic
CAediting_43107	chr1_35016145_-	ncRNA_intronic
CAediting_43108	chr1_35016146_-	ncRNA_intronic
CAediting_43109	chr1_35016155_-	ncRNA_intronic
CAediting_43110	chr1_35016167_-	ncRNA_intronic
CAediting_43111	chr1_35016169_-	ncRNA_intronic
CAediting_43112	chr1_35016183_-	ncRNA_intronic
CAediting_43113	chr1_35016195_-	ncRNA_intronic
CAediting_43114	chr1_35016215_-	ncRNA_intronic
CAediting_43115	chr1_35016221_-	ncRNA_intronic
CAediting_43116	chr1_35016222_-	ncRNA_intronic
CAediting_43117	chr1_35016230_-	ncRNA_intronic
CAediting_43118	chr1_35016943_-	ncRNA_intronic
CAediting_43119	chr1_35016953_-	ncRNA_intronic
CAediting_43120	chr1_35018110_-	ncRNA_exonic
CAediting_43121	chr1_35018142_-	ncRNA_exonic
CAediting_43122	chr1_35025059_-	ncRNA_intronic
CAediting_43123	chr1_35029148_-	ncRNA_intronic
CAediting_43124	chr1_35030375_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_43006	chr1_34986277_-	DNA	hAT-Charlie	MER58B
CAediting_43007	chr1_34986451_-	SINE	Alu	AluSq2
CAediting_43008	chr1_34986454_-	SINE	Alu	AluSq2
CAediting_43009	chr1_34986466_-	SINE	Alu	AluSq2
CAediting_43010	chr1_34986493_-	SINE	Alu	AluSq2
CAediting_43011	chr1_34986519_-	SINE	Alu	AluSq2
CAediting_43012	chr1_34986526_-	SINE	Alu	AluSq2
CAediting_43013	chr1_34986541_-	SINE	Alu	AluSq2
CAediting_43014	chr1_34986543_-	SINE	Alu	AluSq2
CAediting_43015	chr1_34986545_-	SINE	Alu	AluSq2
CAediting_43016	chr1_34986582_-	SINE	Alu	AluSq2
CAediting_43017	chr1_34986586_-	SINE	Alu	AluSq2
CAediting_43018	chr1_34986588_-	SINE	Alu	AluSq2
CAediting_43019	chr1_34986598_-	SINE	Alu	AluSq2
CAediting_43020	chr1_34986601_-	SINE	Alu	AluSq2
CAediting_43021	chr1_34986602_-	SINE	Alu	AluSq2
CAediting_43022	chr1_34986624_-	SINE	Alu	AluSq2
CAediting_43023	chr1_34986626_-	SINE	Alu	AluSq2
CAediting_43024	chr1_34986627_-	SINE	Alu	AluSq2
CAediting_43025	chr1_34989290_-	SINE	Alu	AluJb
CAediting_43026	chr1_34989293_-	SINE	Alu	AluJb
CAediting_43027	chr1_34989321_-	SINE	Alu	AluJb
CAediting_43028	chr1_34989333_-	SINE	Alu	AluJb
CAediting_43029	chr1_34989455_-	SINE	Alu	AluJb
CAediting_43030	chr1_34989778_-	SINE	Alu	AluSq2
CAediting_43031	chr1_34989817_-	SINE	Alu	AluSq2
CAediting_43032	chr1_34989837_-	SINE	Alu	AluSq2
CAediting_43033	chr1_34989858_-	SINE	Alu	AluSq2
CAediting_43034	chr1_34989887_-	SINE	Alu	AluSq2
CAediting_43035	chr1_34990274_-	SINE	Alu	AluSx3
CAediting_43036	chr1_34990275_-	SINE	Alu	AluSx3
CAediting_43037	chr1_34990288_-	SINE	Alu	AluSx3
CAediting_43038	chr1_34990297_-	SINE	Alu	AluSx3
CAediting_43039	chr1_34990299_-	SINE	Alu	AluSx3
CAediting_43040	chr1_34990304_-	SINE	Alu	AluSx3
CAediting_43041	chr1_34990313_-	SINE	Alu	AluSx3
CAediting_43042	chr1_34990316_-	SINE	Alu	AluSx3
CAediting_43043	chr1_34990322_-	SINE	Alu	AluSx3
CAediting_43044	chr1_34990335_-	SINE	Alu	AluSx3
CAediting_43045	chr1_34990477_-	SINE	Alu	AluSx3
CAediting_43046	chr1_34991145_-	SINE	Alu	AluSp
CAediting_43047	chr1_34993196_-	SINE	Alu	AluSx3
CAediting_43048	chr1_34993208_-	SINE	Alu	AluSx3
CAediting_43049	chr1_34993236_-	SINE	Alu	AluSx3
CAediting_43050	chr1_34993244_-	SINE	Alu	AluSx3
CAediting_43051	chr1_34993286_-	SINE	Alu	AluSx3
CAediting_43052	chr1_34993378_-	SINE	Alu	AluSx3
CAediting_43053	chr1_34993384_-	SINE	Alu	AluSx3
CAediting_43054	chr1_34994883_-	DNA	TcMar-Tigger	Tigger7
CAediting_43055	chr1_34995240_-	DNA	TcMar-Tigger	Tigger7
CAediting_43056	chr1_34995257_-	DNA	TcMar-Tigger	Tigger7
CAediting_43057	chr1_34995260_-	DNA	TcMar-Tigger	Tigger7
CAediting_43058	chr1_34995274_-	DNA	TcMar-Tigger	Tigger7
CAediting_43059	chr1_34998226_-	SINE	Alu	AluSg7
CAediting_43060	chr1_34998268_-	SINE	Alu	AluSg7
CAediting_43061	chr1_34998930_-	SINE	Alu	AluJr
CAediting_43062	chr1_34999001_-	SINE	Alu	AluJr
CAediting_43063	chr1_34999070_-	SINE	Alu	AluJr
CAediting_43064	chr1_34999118_-	LINE	L2	L2a
CAediting_43065	chr1_35000129_-	SINE	Alu	AluJb
CAediting_43066	chr1_35000163_-	SINE	Alu	AluJb
CAediting_43067	chr1_35000168_-	SINE	Alu	AluJb
CAediting_43068	chr1_35003007_-	SINE	Alu	AluJr4
CAediting_43069	chr1_35003067_-	SINE	Alu	AluJr4
CAediting_43070	chr1_35003083_-	SINE	Alu	AluJr4
CAediting_43071	chr1_35013905_-	SINE	Alu	AluSg
CAediting_43072	chr1_35013957_-	SINE	Alu	AluSg
CAediting_43073	chr1_35014358_-	SINE	Alu	FLAM_C
CAediting_43074	chr1_35014411_-	SINE	Alu	FLAM_C
CAediting_43075	chr1_35015469_-	SINE	Alu	AluSx1
CAediting_43076	chr1_35015496_-	SINE	Alu	AluSx1
CAediting_43077	chr1_35015532_-	SINE	Alu	AluSx1
CAediting_43078	chr1_35015551_-	SINE	Alu	AluSx1
CAediting_43079	chr1_35015558_-	SINE	Alu	AluSx1
CAediting_43080	chr1_35015561_-	SINE	Alu	AluSx1
CAediting_43081	chr1_35015567_-	SINE	Alu	AluSx1
CAediting_43082	chr1_35015576_-	SINE	Alu	AluSx1
CAediting_43083	chr1_35015986_-	SINE	Alu	AluSx4
CAediting_43084	chr1_35016020_-	SINE	Alu	AluSx4
CAediting_43085	chr1_35016024_-	SINE	Alu	AluSx4
CAediting_43086	chr1_35016037_-	SINE	Alu	AluSx4
CAediting_43087	chr1_35016040_-	SINE	Alu	AluSx4
CAediting_43088	chr1_35016044_-	SINE	Alu	AluSx4
CAediting_43089	chr1_35016045_-	SINE	Alu	AluSx4
CAediting_43090	chr1_35016056_-	SINE	Alu	AluSx4
CAediting_43091	chr1_35016059_-	SINE	Alu	AluSx4
CAediting_43092	chr1_35016061_-	SINE	Alu	AluSx4
CAediting_43093	chr1_35016063_-	SINE	Alu	AluSx4
CAediting_43094	chr1_35016084_-	SINE	Alu	AluSx4
CAediting_43095	chr1_35016099_-	SINE	Alu	AluSx4
CAediting_43096	chr1_35016107_-	SINE	Alu	AluSx4
CAediting_43097	chr1_35016119_-	SINE	Alu	AluSx4
CAediting_43098	chr1_35016120_-	SINE	Alu	AluSx4
CAediting_43099	chr1_35016121_-	SINE	Alu	AluSx4
CAediting_43100	chr1_35016124_-	SINE	Alu	AluSx4
CAediting_43101	chr1_35016126_-	SINE	Alu	AluSx4
CAediting_43102	chr1_35016127_-	SINE	Alu	AluSx4
CAediting_43103	chr1_35016128_-	SINE	Alu	AluSx4
CAediting_43104	chr1_35016129_-	SINE	Alu	AluSx4
CAediting_43105	chr1_35016130_-	SINE	Alu	AluSx4
CAediting_43106	chr1_35016144_-	SINE	Alu	AluSx4
CAediting_43107	chr1_35016145_-	SINE	Alu	AluSx4
CAediting_43108	chr1_35016146_-	SINE	Alu	AluSx4
CAediting_43109	chr1_35016155_-	SINE	Alu	AluSx4
CAediting_43110	chr1_35016167_-	SINE	Alu	AluSx4
CAediting_43111	chr1_35016169_-	SINE	Alu	AluSx4
CAediting_43112	chr1_35016183_-	SINE	Alu	AluSx4
CAediting_43113	chr1_35016195_-	SINE	Alu	AluSx4
CAediting_43114	chr1_35016215_-	SINE	Alu	AluSx4
CAediting_43115	chr1_35016221_-	SINE	Alu	AluSx4
CAediting_43116	chr1_35016222_-	SINE	Alu	AluSx4
CAediting_43117	chr1_35016230_-	SINE	Alu	AluSx4
CAediting_43118	chr1_35016943_-	SINE	Alu	AluJo
CAediting_43119	chr1_35016953_-	SINE	Alu	AluJo
CAediting_43120	chr1_35018110_-	SINE	Alu	AluJo
CAediting_43121	chr1_35018142_-	SINE	Alu	AluJo
CAediting_43122	chr1_35025059_-	SINE	Alu	AluSz
CAediting_43123	chr1_35029148_-	SINE	Alu	AluSq2
CAediting_43124	chr1_35030375_-	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for ZMYM6

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000163867.15.ZMYM6.

Correlation between RNA A-to-I editing and PSI for ENSG00000163867.15.ZMYM6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZMYM6

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZMYM6

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZMYM6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_43120	chr1_35018110_-	ENSG00000163867.15	ENST00000317538	hsa-miR-4478	35018106	35018112	7mer-m8	35018105	35018120	149	-22.23
CAediting_43120	chr1_35018110_-	ENSG00000163867.15	ENST00000317538	hsa-miR-4649-3p	35018109	35018115	7mer-m8	35018108	35018128	144	-16.53
CAediting_43120	chr1_35018110_-	ENSG00000163867.15	ENST00000317538	hsa-miR-485-5p	35018105	35018111	7mer-m8	35018104	35018126	151	-15.94
CAediting_43120	chr1_35018110_-	ENSG00000163867.15	ENST00000317538	hsa-miR-7160-5p	35018108	35018114	7mer-m8	35018107	35018125	154	-22.6

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000163867.15	ENST00000317538	hsa-miR-4512	35018433	35018439	7mer-m8	35018432	35018456	145	-15.91
CAediting_228905	chr2_188297554_+	ENSG00000163867.15	ENST00000317538	hsa-miR-561-3p	35017393	35017399	7mer-m8	35017392	35017413	142	-8.72
CAediting_228905	chr2_188297554_+	ENSG00000163867.15	ENST00000317538	hsa-miR-561-3p	35018952	35018959	8mer-1a	35018952	35018973	152	-10.04
CAediting_524911	chr7_5495852_-	ENSG00000163867.15	ENST00000317538	hsa-miR-589-3p	35017382	35017388	7mer-m8	35017381	35017404	152	-14.01
CAediting_228905	chr2_188297554_+	ENSG00000163867.15	ENST00000373333	hsa-miR-561-3p	35018952	35018959	8mer-1a	35018952	35018973	152	-10.04

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000163867.15	ENST00000317538	hsa-miR-548aa	35018166	35018172	7mer-m8	35018165	35018189	147	-9.31
CAediting_1229414	chr17_67471546_+	ENSG00000163867.15	ENST00000317538	hsa-miR-548aa	35018166	35018172	7mer-m8	35018165	35018189	147	-9.31
CAediting_1229415	chr17_67471547_+	ENSG00000163867.15	ENST00000317538	hsa-miR-548aa	35018166	35018172	7mer-m8	35018165	35018189	147	-9.31

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZMYM6

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000493328.4	processed_transcript
ENST00000317538.8	protein_coding
ENST00000460607.1	processed_transcript
ENST00000471566.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_43006	ENST00000493328.4	chr1_34986277_-	-1648.50	-1649.10	-1697.80
CAediting_43007	ENST00000493328.4	chr1_34986451_-	-1651.90	-1649.10	-1697.80
CAediting_43008	ENST00000493328.4	chr1_34986454_-	-1649.60	-1649.10	-1697.80
CAediting_43009	ENST00000493328.4	chr1_34986466_-	-1652.70	-1649.10	-1697.80
CAediting_43010	ENST00000493328.4	chr1_34986493_-	-1654.20	-1649.10	-1697.80
CAediting_43011	ENST00000493328.4	chr1_34986519_-	-1649.10	-1649.10	-1697.80
CAediting_43012	ENST00000493328.4	chr1_34986526_-	-1649.90	-1649.10	-1697.80
CAediting_43013	ENST00000493328.4	chr1_34986541_-	-1655.90	-1649.10	-1697.80
CAediting_43014	ENST00000493328.4	chr1_34986543_-	-1652.00	-1649.10	-1697.80
CAediting_43015	ENST00000493328.4	chr1_34986545_-	-1651.30	-1649.10	-1697.80
CAediting_43016	ENST00000493328.4	chr1_34986582_-	-1648.80	-1649.10	-1697.80
CAediting_43017	ENST00000493328.4	chr1_34986586_-	-1654.90	-1649.10	-1697.80
CAediting_43018	ENST00000493328.4	chr1_34986588_-	-1649.70	-1649.10	-1697.80
CAediting_43019	ENST00000493328.4	chr1_34986598_-	-1654.50	-1649.10	-1697.80
CAediting_43020	ENST00000493328.4	chr1_34986601_-	-1651.80	-1649.10	-1697.80
CAediting_43021	ENST00000493328.4	chr1_34986602_-	-1649.10	-1649.10	-1697.80
CAediting_43022	ENST00000493328.4	chr1_34986624_-	-1649.10	-1649.10	-1697.80
CAediting_43023	ENST00000493328.4	chr1_34986626_-	-1649.40	-1649.10	-1697.80
CAediting_43024	ENST00000493328.4	chr1_34986627_-	-1649.50	-1649.10	-1697.80
CAediting_43025	ENST00000493328.4	chr1_34989290_-	-1649.10	-1649.10	-1697.80
CAediting_43026	ENST00000493328.4	chr1_34989293_-	-1650.20	-1649.10	-1697.80
CAediting_43027	ENST00000493328.4	chr1_34989321_-	-1650.00	-1649.10	-1697.80
CAediting_43028	ENST00000493328.4	chr1_34989333_-	-1651.40	-1649.10	-1697.80
CAediting_43029	ENST00000493328.4	chr1_34989455_-	-1648.90	-1649.10	-1697.80
CAediting_43030	ENST00000493328.4	chr1_34989778_-	-1649.30	-1649.10	-1697.80
CAediting_43031	ENST00000493328.4	chr1_34989817_-	-1653.70	-1649.10	-1697.80
CAediting_43032	ENST00000493328.4	chr1_34989837_-	-1649.10	-1649.10	-1697.80
CAediting_43033	ENST00000493328.4	chr1_34989858_-	-1652.00	-1649.10	-1697.80
CAediting_43034	ENST00000493328.4	chr1_34989887_-	-1651.10	-1649.10	-1697.80
CAediting_43035	ENST00000493328.4	chr1_34990274_-	-1649.40	-1649.10	-1697.80
CAediting_43036	ENST00000493328.4	chr1_34990275_-	-1648.80	-1649.10	-1697.80
CAediting_43037	ENST00000493328.4	chr1_34990288_-	-1648.80	-1649.10	-1697.80
CAediting_43038	ENST00000493328.4	chr1_34990297_-	-1648.90	-1649.10	-1697.80
CAediting_43039	ENST00000493328.4	chr1_34990299_-	-1652.80	-1649.10	-1697.80
CAediting_43040	ENST00000493328.4	chr1_34990304_-	-1650.40	-1649.10	-1697.80
CAediting_43120	ENST00000317538.8	chr1_35018110_-	-606.50	-607.20	-606.50
CAediting_43121	ENST00000317538.8	chr1_35018142_-	-607.20	-607.20	-606.50
CAediting_43120	ENST00000460607.1	chr1_35018110_-	-546.50	-546.60	-546.50
CAediting_43121	ENST00000460607.1	chr1_35018142_-	-546.60	-546.60	-546.50
CAediting_43124	ENST00000471566.1	chr1_35030375_-	-197.00	-197.40	-197.00

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Relation with ADAR for ZMYM6

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for ZMYM6

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ZMYM6

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ZMYM6

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZMYM6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ZMYM6	C3714756	Intellectual Disability	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene