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Editing gene: SNX29 (CAeditome ID:92017)

Gene summary for SNX29

Gene summary

Gene information	Gene symbol	SNX29
	Gene ID	92017
	Gene name	sorting nexin 29
	Synonyms	A-388D4.1\|RUNDC2A
	Cytomap	16p13.13-p13.12
	Type of gene	protein-coding
	Description	sorting nexin-29RUN domain containing 2ARUN domain-containing protein 2A
	Modification date	20210518
	UniProtAcc	Q8TEQ0
	Context	- 25502083(Gene expression profile analysis identifies metastasis and chemoresistance-associated genes in epithelial ovarian carcinoma cells)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SNX29

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000048471.12

RNA A-to-I editing events in Cancer.

CAediting_1089147(11979089, +), CAediting_1089148(11979098, +), CAediting_1089149(11979110, +), CAediting_1089150(11979116, +), CAediting_1089151(11979138, +), CAediting_1089152(11979155, +), CAediting_1089153(11979177, +), CAediting_1089154(11979623, +), CAediting_1089155(11979663, +), CAediting_1089156(11979709, +), CAediting_1089157(11979713, +), CAediting_1089158(11979767, +), CAediting_1089159(11984120, +), CAediting_1089160(11984246, +), CAediting_1089161(11984281, +), CAediting_1089162(11984286, +), CAediting_1089163(11984294, +), CAediting_1089164(11984305, +), CAediting_1089165(11984857, +), CAediting_1089166(11984923, +), CAediting_1089167(11984929, +), CAediting_1089168(11986818, +), CAediting_1089169(12001959, +), CAediting_1089170(12007449, +), CAediting_1089171(12011503, +), CAediting_1089172(12013389, +), CAediting_1089173(12013464, +), CAediting_1089174(12014494, +), CAediting_1089175(12014518, +), CAediting_1089176(12014572, +), CAediting_1089177(12014574, +), CAediting_1089178(12014582, +), CAediting_1089179(12014612, +), CAediting_1089180(12014625, +), CAediting_1089181(12014638, +), CAediting_1089182(12014652, +), CAediting_1089183(12017953, +), CAediting_1089184(12017962, +), CAediting_1089185(12023457, +), CAediting_1089186(12023498, +), CAediting_1089187(12023566, +), CAediting_1089188(12028878, +), CAediting_1089189(12032882, +), CAediting_1089190(12033736, +), CAediting_1089191(12035324, +), CAediting_1089192(12036152, +), CAediting_1089193(12036160, +), CAediting_1089194(12036162, +), CAediting_1089195(12037765, +), CAediting_1089196(12037773, +), CAediting_1089197(12037834, +), CAediting_1089198(12037865, +), CAediting_1089199(12052400, +), CAediting_1089200(12052402, +), CAediting_1089201(12053148, +), CAediting_1089202(12053152, +), CAediting_1089203(12053174, +), CAediting_1089204(12053201, +), CAediting_1089205(12053233, +), CAediting_1089206(12053234, +), CAediting_1089207(12062218, +), CAediting_1089208(12068295, +), CAediting_1089209(12068353, +), CAediting_1089210(12080753, +), CAediting_1089211(12080756, +), CAediting_1089212(12080761, +), CAediting_1089213(12080791, +), CAediting_1089214(12081529, +), CAediting_1089215(12081551, +), CAediting_1089216(12081552, +), CAediting_1089217(12081557, +), CAediting_1089218(12081561, +), CAediting_1089219(12081574, +), CAediting_1089220(12081579, +), CAediting_1089221(12081591, +), CAediting_1089222(12081592, +), CAediting_1089223(12081593, +), CAediting_1089224(12081623, +), CAediting_1089225(12083144, +), CAediting_1089226(12083212, +), CAediting_1089227(12084245, +), CAediting_1089228(12084275, +), CAediting_1089229(12084285, +), CAediting_1089230(12084797, +), CAediting_1089231(12084807, +), CAediting_1089232(12084887, +), CAediting_1089233(12084920, +), CAediting_1089234(12084931, +), CAediting_1089235(12084943, +), CAediting_1089236(12084949, +), CAediting_1089237(12084955, +), CAediting_1089238(12084959, +), CAediting_1089239(12084960, +), CAediting_1089240(12084976, +), CAediting_1089241(12084979, +), CAediting_1089242(12084990, +), CAediting_1089243(12085003, +), CAediting_1089244(12085011, +), CAediting_1089245(12085015, +), CAediting_1089246(12085025, +), CAediting_1089247(12085407, +), CAediting_1089248(12085420, +), CAediting_1089249(12085507, +), CAediting_1089250(12085527, +), CAediting_1089251(12086266, +), CAediting_1089252(12090577, +), CAediting_1089253(12090930, +), CAediting_1089254(12090944, +), CAediting_1089255(12090970, +), CAediting_1089256(12105364, +), CAediting_1089257(12105372, +), CAediting_1089258(12108859, +), CAediting_1089259(12108902, +), CAediting_1089260(12108949, +), CAediting_1089261(12109029, +), CAediting_1089262(12109043, +), CAediting_1089263(12109048, +), CAediting_1089264(12109049, +), CAediting_1089265(12109830, +), CAediting_1089266(12109831, +), CAediting_1089267(12130010, +), CAediting_1089268(12130059, +), CAediting_1089269(12130221, +), CAediting_1089270(12130222, +), CAediting_1089271(12130228, +), CAediting_1089272(12130289, +), CAediting_1089273(12130328, +), CAediting_1089274(12130364, +), CAediting_1089275(12130381, +), CAediting_1089276(12130395, +), CAediting_1089277(12132160, +), CAediting_1089278(12133542, +), CAediting_1089279(12133559, +), CAediting_1089280(12136869, +), CAediting_1089281(12138391, +), CAediting_1089282(12138393, +), CAediting_1089283(12138446, +), CAediting_1089284(12138947, +), CAediting_1089285(12138954, +), CAediting_1089286(12138974, +), CAediting_1089287(12138983, +), CAediting_1089288(12138992, +), CAediting_1089289(12138999, +), CAediting_1089290(12139016, +), CAediting_1089291(12139037, +), CAediting_1089292(12139075, +), CAediting_1089293(12139081, +), CAediting_1089294(12139082, +), CAediting_1089295(12139105, +), CAediting_1089296(12139113, +), CAediting_1089297(12139130, +), CAediting_1089298(12139709, +), CAediting_1089299(12139729, +), CAediting_1089300(12139732, +), CAediting_1089301(12139766, +), CAediting_1089302(12139819, +), CAediting_1089303(12139828, +), CAediting_1089304(12139834, +), CAediting_1089305(12139874, +), CAediting_1089306(12139896, +), CAediting_1089307(12139906, +), CAediting_1089308(12139915, +), CAediting_1089309(12139926, +), CAediting_1089310(12139931, +), CAediting_1089311(12142689, +), CAediting_1089312(12142746, +), CAediting_1089313(12151901, +), CAediting_1089314(12152074, +), CAediting_1089315(12152090, +), CAediting_1089316(12152100, +), CAediting_1089317(12152165, +), CAediting_1089318(12153548, +), CAediting_1089319(12173922, +), CAediting_1089320(12175419, +), CAediting_1089321(12175446, +), CAediting_1089322(12175451, +), CAediting_1089323(12175504, +), CAediting_1089324(12175524, +), CAediting_1089325(12175531, +), CAediting_1089326(12175540, +), CAediting_1089327(12175560, +), CAediting_1089328(12175571, +), CAediting_1089329(12175885, +), CAediting_1089330(12179466, +), CAediting_1089331(12182121, +), CAediting_1089332(12182778, +), CAediting_1089333(12182779, +), CAediting_1089334(12182783, +), CAediting_1089335(12182787, +), CAediting_1089336(12182791, +), CAediting_1089337(12182813, +), CAediting_1089338(12182823, +), CAediting_1089339(12182854, +), CAediting_1089340(12182855, +), CAediting_1089341(12182862, +), CAediting_1089342(12183027, +), CAediting_1089343(12183062, +), CAediting_1089344(12183099, +), CAediting_1089345(12183100, +), CAediting_1089346(12183125, +), CAediting_1089347(12183126, +), CAediting_1089348(12183139, +), CAediting_1089349(12192568, +), CAediting_1089350(12192581, +), CAediting_1089351(12193350, +), CAediting_1089352(12197503, +), CAediting_1089353(12209329, +), CAediting_1089354(12209373, +), CAediting_1089355(12222672, +), CAediting_1089356(12222702, +), CAediting_1089357(12222789, +), CAediting_1089358(12223185, +), CAediting_1089359(12226787, +), CAediting_1089360(12227690, +), CAediting_1089361(12227779, +), CAediting_1089362(12227780, +), CAediting_1089363(12227785, +), CAediting_1089364(12227819, +), CAediting_1089365(12227820, +), CAediting_1089366(12238478, +), CAediting_1089367(12239572, +), CAediting_1089368(12239596, +), CAediting_1089369(12239722, +), CAediting_1089370(12239726, +), CAediting_1089371(12239729, +), CAediting_1089372(12239745, +), CAediting_1089373(12239759, +), CAediting_1089374(12239799, +), CAediting_1089375(12242677, +), CAediting_1089376(12242707, +), CAediting_1089377(12242723, +), CAediting_1089378(12242747, +), CAediting_1089379(12251889, +), CAediting_1089380(12251893, +), CAediting_1089381(12251944, +), CAediting_1089382(12251995, +), CAediting_1089383(12251999, +), CAediting_1089384(12265583, +), CAediting_1089385(12265614, +), CAediting_1089386(12265641, +), CAediting_1089387(12266160, +), CAediting_1089388(12266863, +), CAediting_1089389(12266864, +), CAediting_1089390(12266881, +), CAediting_1089391(12266903, +), CAediting_1089392(12280931, +), CAediting_1089393(12280939, +), CAediting_1089394(12280982, +), CAediting_1089395(12280987, +), CAediting_1089396(12281020, +), CAediting_1089397(12281815, +), CAediting_1089398(12281816, +), CAediting_1089399(12281861, +), CAediting_1089400(12281937, +), CAediting_1089401(12281963, +), CAediting_1089402(12281974, +), CAediting_1089403(12281991, +), CAediting_1089404(12281995, +), CAediting_1089405(12281999, +), CAediting_1089406(12282004, +), CAediting_1089407(12282005, +), CAediting_1089408(12282010, +), CAediting_1089409(12282012, +), CAediting_1089410(12282013, +), CAediting_1089411(12282029, +), CAediting_1089412(12282055, +), CAediting_1089413(12282735, +), CAediting_1089414(12282749, +), CAediting_1089415(12282756, +), CAediting_1089416(12282773, +), CAediting_1089417(12282797, +), CAediting_1089418(12288081, +), CAediting_1089419(12299071, +), CAediting_1089420(12305889, +), CAediting_1089421(12305898, +), CAediting_1089422(12305899, +), CAediting_1089423(12305901, +), CAediting_1089424(12305906, +), CAediting_1089425(12305936, +), CAediting_1089426(12305944, +), CAediting_1089427(12305945, +), CAediting_1089428(12305964, +), CAediting_1089429(12305969, +), CAediting_1089430(12305974, +), CAediting_1089431(12306026, +), CAediting_1089432(12306049, +), CAediting_1089433(12306364, +), CAediting_1089434(12306391, +), CAediting_1089435(12306439, +), CAediting_1089436(12306440, +), CAediting_1089437(12306449, +), CAediting_1089438(12306507, +), CAediting_1089439(12329197, +), CAediting_1089440(12331626, +), CAediting_1089441(12339184, +), CAediting_1089442(12339250, +), CAediting_1089443(12339251, +), CAediting_1089444(12364010, +), CAediting_1089445(12365601, +), CAediting_1089446(12365611, +), CAediting_1089447(12365921, +), CAediting_1089448(12365927, +), CAediting_1089449(12375939, +), CAediting_1089450(12376474, +), CAediting_1089451(12376480, +), CAediting_1089452(12376575, +), CAediting_1089453(12376576, +), CAediting_1089454(12376658, +), CAediting_1089455(12379357, +), CAediting_1089456(12391166, +), CAediting_1089457(12408064, +), CAediting_1089458(12408083, +), CAediting_1089459(12410508, +), CAediting_1089460(12410540, +), CAediting_1089461(12410656, +), CAediting_1089462(12442703, +), CAediting_1089463(12443550, +), CAediting_1089464(12443555, +), CAediting_1089465(12443636, +), CAediting_1089466(12443640, +), CAediting_1089467(12443671, +), CAediting_1089468(12446931, +), CAediting_1089469(12446932, +), CAediting_1089470(12446955, +), CAediting_1089471(12446964, +), CAediting_1089472(12446969, +), CAediting_1089473(12447000, +), CAediting_1089474(12447005, +), CAediting_1089475(12447006, +), CAediting_1089476(12447020, +), CAediting_1089477(12447046, +), CAediting_1089478(12447056, +), CAediting_1089479(12447073, +), CAediting_1089480(12447076, +), CAediting_1089481(12447082, +), CAediting_1089482(12447088, +), CAediting_1089483(12447108, +), CAediting_1089484(12461695, +), CAediting_1089485(12461755, +), CAediting_1089486(12461836, +), CAediting_1089487(12461862, +), CAediting_1089488(12495205, +), CAediting_1089489(12495973, +), CAediting_1089490(12501293, +), CAediting_1089491(12536790, +), CAediting_1089492(12536797, +), CAediting_1089493(12536917, +), CAediting_1089494(12537862, +), CAediting_1089495(12537864, +), CAediting_1089496(12537886, +), CAediting_1089497(12537926, +), CAediting_1089498(12538261, +), CAediting_1089499(12549295, +), CAediting_1089500(12549319, +), CAediting_1089501(12554060, +), CAediting_1089502(12554061, +), CAediting_1089503(12555572, +), CAediting_1089504(12555626, +), CAediting_1089505(12555634, +), CAediting_1089506(12555635, +), CAediting_1089507(12555670, +), CAediting_1089508(12555694, +), CAediting_1089509(12555859, +),

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RNA editing positional annotations for SNX29 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1089147	chr16_11979089_+	ncRNA_intronic
CAediting_1089148	chr16_11979098_+	ncRNA_intronic
CAediting_1089149	chr16_11979110_+	ncRNA_intronic
CAediting_1089150	chr16_11979116_+	ncRNA_intronic
CAediting_1089151	chr16_11979138_+	ncRNA_intronic
CAediting_1089152	chr16_11979155_+	ncRNA_intronic
CAediting_1089153	chr16_11979177_+	ncRNA_intronic
CAediting_1089154	chr16_11979623_+	ncRNA_intronic
CAediting_1089155	chr16_11979663_+	ncRNA_intronic
CAediting_1089156	chr16_11979709_+	ncRNA_intronic
CAediting_1089157	chr16_11979713_+	ncRNA_intronic
CAediting_1089158	chr16_11979767_+	ncRNA_intronic
CAediting_1089159	chr16_11984120_+	ncRNA_intronic
CAediting_1089160	chr16_11984246_+	ncRNA_intronic
CAediting_1089161	chr16_11984281_+	ncRNA_intronic
CAediting_1089162	chr16_11984286_+	ncRNA_intronic
CAediting_1089163	chr16_11984294_+	ncRNA_intronic
CAediting_1089164	chr16_11984305_+	ncRNA_intronic
CAediting_1089165	chr16_11984857_+	ncRNA_intronic
CAediting_1089166	chr16_11984923_+	ncRNA_intronic
CAediting_1089167	chr16_11984929_+	ncRNA_intronic
CAediting_1089168	chr16_11986818_+	ncRNA_intronic
CAediting_1089169	chr16_12001959_+	ncRNA_intronic
CAediting_1089170	chr16_12007449_+	ncRNA_intronic
CAediting_1089171	chr16_12011503_+	ncRNA_intronic
CAediting_1089172	chr16_12013389_+	ncRNA_intronic
CAediting_1089173	chr16_12013464_+	ncRNA_intronic
CAediting_1089174	chr16_12014494_+	ncRNA_intronic
CAediting_1089175	chr16_12014518_+	ncRNA_intronic
CAediting_1089176	chr16_12014572_+	ncRNA_intronic
CAediting_1089177	chr16_12014574_+	ncRNA_intronic
CAediting_1089178	chr16_12014582_+	ncRNA_intronic
CAediting_1089179	chr16_12014612_+	ncRNA_intronic
CAediting_1089180	chr16_12014625_+	ncRNA_intronic
CAediting_1089181	chr16_12014638_+	ncRNA_intronic
CAediting_1089182	chr16_12014652_+	ncRNA_intronic
CAediting_1089183	chr16_12017953_+	ncRNA_intronic
CAediting_1089184	chr16_12017962_+	ncRNA_intronic
CAediting_1089185	chr16_12023457_+	ncRNA_intronic
CAediting_1089186	chr16_12023498_+	ncRNA_intronic
CAediting_1089187	chr16_12023566_+	ncRNA_intronic
CAediting_1089188	chr16_12028878_+	ncRNA_intronic
CAediting_1089189	chr16_12032882_+	ncRNA_intronic
CAediting_1089190	chr16_12033736_+	ncRNA_intronic
CAediting_1089191	chr16_12035324_+	ncRNA_intronic
CAediting_1089192	chr16_12036152_+	ncRNA_intronic
CAediting_1089193	chr16_12036160_+	ncRNA_intronic
CAediting_1089194	chr16_12036162_+	ncRNA_intronic
CAediting_1089195	chr16_12037765_+	ncRNA_intronic
CAediting_1089196	chr16_12037773_+	ncRNA_intronic
CAediting_1089197	chr16_12037834_+	ncRNA_intronic
CAediting_1089198	chr16_12037865_+	ncRNA_intronic
CAediting_1089199	chr16_12052400_+	ncRNA_exonic
CAediting_1089200	chr16_12052402_+	ncRNA_exonic
CAediting_1089201	chr16_12053148_+	ncRNA_exonic
CAediting_1089202	chr16_12053152_+	ncRNA_exonic
CAediting_1089203	chr16_12053174_+	ncRNA_exonic
CAediting_1089204	chr16_12053201_+	ncRNA_exonic
CAediting_1089205	chr16_12053233_+	ncRNA_exonic
CAediting_1089206	chr16_12053234_+	ncRNA_exonic
CAediting_1089207	chr16_12062218_+	intronic
CAediting_1089208	chr16_12068295_+	intronic
CAediting_1089209	chr16_12068353_+	intronic
CAediting_1089210	chr16_12080753_+	intronic
CAediting_1089211	chr16_12080756_+	intronic
CAediting_1089212	chr16_12080761_+	intronic
CAediting_1089213	chr16_12080791_+	intronic
CAediting_1089214	chr16_12081529_+	ncRNA_exonic
CAediting_1089215	chr16_12081551_+	ncRNA_intronic
CAediting_1089216	chr16_12081552_+	ncRNA_intronic
CAediting_1089217	chr16_12081557_+	ncRNA_intronic
CAediting_1089218	chr16_12081561_+	ncRNA_intronic
CAediting_1089219	chr16_12081574_+	ncRNA_intronic
CAediting_1089220	chr16_12081579_+	ncRNA_intronic
CAediting_1089221	chr16_12081591_+	ncRNA_intronic
CAediting_1089222	chr16_12081592_+	ncRNA_intronic
CAediting_1089223	chr16_12081593_+	ncRNA_intronic
CAediting_1089224	chr16_12081623_+	ncRNA_intronic
CAediting_1089225	chr16_12083144_+	intronic
CAediting_1089226	chr16_12083212_+	intronic
CAediting_1089227	chr16_12084245_+	intronic
CAediting_1089228	chr16_12084275_+	intronic
CAediting_1089229	chr16_12084285_+	intronic
CAediting_1089230	chr16_12084797_+	intronic
CAediting_1089231	chr16_12084807_+	intronic
CAediting_1089232	chr16_12084887_+	intronic
CAediting_1089233	chr16_12084920_+	intronic
CAediting_1089234	chr16_12084931_+	intronic
CAediting_1089235	chr16_12084943_+	intronic
CAediting_1089236	chr16_12084949_+	intronic
CAediting_1089237	chr16_12084955_+	intronic
CAediting_1089238	chr16_12084959_+	intronic
CAediting_1089239	chr16_12084960_+	intronic
CAediting_1089240	chr16_12084976_+	intronic
CAediting_1089241	chr16_12084979_+	intronic
CAediting_1089242	chr16_12084990_+	intronic
CAediting_1089243	chr16_12085003_+	intronic
CAediting_1089244	chr16_12085011_+	intronic
CAediting_1089245	chr16_12085015_+	intronic
CAediting_1089246	chr16_12085025_+	intronic
CAediting_1089247	chr16_12085407_+	intronic
CAediting_1089248	chr16_12085420_+	intronic
CAediting_1089249	chr16_12085507_+	intronic
CAediting_1089250	chr16_12085527_+	intronic
CAediting_1089251	chr16_12086266_+	intronic
CAediting_1089252	chr16_12090577_+	intronic
CAediting_1089253	chr16_12090930_+	intronic
CAediting_1089254	chr16_12090944_+	intronic
CAediting_1089255	chr16_12090970_+	intronic
CAediting_1089256	chr16_12105364_+	intronic
CAediting_1089257	chr16_12105372_+	intronic
CAediting_1089258	chr16_12108859_+	intronic
CAediting_1089259	chr16_12108902_+	intronic
CAediting_1089260	chr16_12108949_+	intronic
CAediting_1089261	chr16_12109029_+	intronic
CAediting_1089262	chr16_12109043_+	intronic
CAediting_1089263	chr16_12109048_+	intronic
CAediting_1089264	chr16_12109049_+	intronic
CAediting_1089265	chr16_12109830_+	intronic
CAediting_1089266	chr16_12109831_+	intronic
CAediting_1089267	chr16_12130010_+	intronic
CAediting_1089268	chr16_12130059_+	intronic
CAediting_1089269	chr16_12130221_+	intronic
CAediting_1089270	chr16_12130222_+	intronic
CAediting_1089271	chr16_12130228_+	intronic
CAediting_1089272	chr16_12130289_+	intronic
CAediting_1089273	chr16_12130328_+	intronic
CAediting_1089274	chr16_12130364_+	intronic
CAediting_1089275	chr16_12130381_+	intronic
CAediting_1089276	chr16_12130395_+	intronic
CAediting_1089277	chr16_12132160_+	intronic
CAediting_1089278	chr16_12133542_+	intronic
CAediting_1089279	chr16_12133559_+	intronic
CAediting_1089280	chr16_12136869_+	intronic
CAediting_1089281	chr16_12138391_+	intronic
CAediting_1089282	chr16_12138393_+	intronic
CAediting_1089283	chr16_12138446_+	intronic
CAediting_1089284	chr16_12138947_+	intronic
CAediting_1089285	chr16_12138954_+	intronic
CAediting_1089286	chr16_12138974_+	intronic
CAediting_1089287	chr16_12138983_+	intronic
CAediting_1089288	chr16_12138992_+	intronic
CAediting_1089289	chr16_12138999_+	intronic
CAediting_1089290	chr16_12139016_+	intronic
CAediting_1089291	chr16_12139037_+	intronic
CAediting_1089292	chr16_12139075_+	intronic
CAediting_1089293	chr16_12139081_+	intronic
CAediting_1089294	chr16_12139082_+	intronic
CAediting_1089295	chr16_12139105_+	intronic
CAediting_1089296	chr16_12139113_+	intronic
CAediting_1089297	chr16_12139130_+	intronic
CAediting_1089298	chr16_12139709_+	intronic
CAediting_1089299	chr16_12139729_+	intronic
CAediting_1089300	chr16_12139732_+	intronic
CAediting_1089301	chr16_12139766_+	intronic
CAediting_1089302	chr16_12139819_+	intronic
CAediting_1089303	chr16_12139828_+	intronic
CAediting_1089304	chr16_12139834_+	intronic
CAediting_1089305	chr16_12139874_+	intronic
CAediting_1089306	chr16_12139896_+	intronic
CAediting_1089307	chr16_12139906_+	intronic
CAediting_1089308	chr16_12139915_+	intronic
CAediting_1089309	chr16_12139926_+	intronic
CAediting_1089310	chr16_12139931_+	intronic
CAediting_1089311	chr16_12142689_+	intronic
CAediting_1089312	chr16_12142746_+	intronic
CAediting_1089313	chr16_12151901_+	intronic
CAediting_1089314	chr16_12152074_+	intronic
CAediting_1089315	chr16_12152090_+	intronic
CAediting_1089316	chr16_12152100_+	intronic
CAediting_1089317	chr16_12152165_+	intronic
CAediting_1089318	chr16_12153548_+	intronic
CAediting_1089319	chr16_12173922_+	intronic
CAediting_1089320	chr16_12175419_+	intronic
CAediting_1089321	chr16_12175446_+	intronic
CAediting_1089322	chr16_12175451_+	intronic
CAediting_1089323	chr16_12175504_+	intronic
CAediting_1089324	chr16_12175524_+	intronic
CAediting_1089325	chr16_12175531_+	intronic
CAediting_1089326	chr16_12175540_+	intronic
CAediting_1089327	chr16_12175560_+	intronic
CAediting_1089328	chr16_12175571_+	intronic
CAediting_1089329	chr16_12175885_+	intronic
CAediting_1089330	chr16_12179466_+	intronic
CAediting_1089331	chr16_12182121_+	intronic
CAediting_1089332	chr16_12182778_+	intronic
CAediting_1089333	chr16_12182779_+	intronic
CAediting_1089334	chr16_12182783_+	intronic
CAediting_1089335	chr16_12182787_+	intronic
CAediting_1089336	chr16_12182791_+	intronic
CAediting_1089337	chr16_12182813_+	intronic
CAediting_1089338	chr16_12182823_+	intronic
CAediting_1089339	chr16_12182854_+	intronic
CAediting_1089340	chr16_12182855_+	intronic
CAediting_1089341	chr16_12182862_+	intronic
CAediting_1089342	chr16_12183027_+	intronic
CAediting_1089343	chr16_12183062_+	intronic
CAediting_1089344	chr16_12183099_+	intronic
CAediting_1089345	chr16_12183100_+	intronic
CAediting_1089346	chr16_12183125_+	intronic
CAediting_1089347	chr16_12183126_+	intronic
CAediting_1089348	chr16_12183139_+	intronic
CAediting_1089349	chr16_12192568_+	intronic
CAediting_1089350	chr16_12192581_+	intronic
CAediting_1089351	chr16_12193350_+	intronic
CAediting_1089352	chr16_12197503_+	intronic
CAediting_1089353	chr16_12209329_+	intronic
CAediting_1089354	chr16_12209373_+	intronic
CAediting_1089355	chr16_12222672_+	intronic
CAediting_1089356	chr16_12222702_+	intronic
CAediting_1089357	chr16_12222789_+	intronic
CAediting_1089358	chr16_12223185_+	intronic
CAediting_1089359	chr16_12226787_+	intronic
CAediting_1089360	chr16_12227690_+	intronic
CAediting_1089361	chr16_12227779_+	intronic
CAediting_1089362	chr16_12227780_+	intronic
CAediting_1089363	chr16_12227785_+	intronic
CAediting_1089364	chr16_12227819_+	intronic
CAediting_1089365	chr16_12227820_+	intronic
CAediting_1089366	chr16_12238478_+	intronic
CAediting_1089367	chr16_12239572_+	intronic
CAediting_1089368	chr16_12239596_+	intronic
CAediting_1089369	chr16_12239722_+	intronic
CAediting_1089370	chr16_12239726_+	intronic
CAediting_1089371	chr16_12239729_+	intronic
CAediting_1089372	chr16_12239745_+	intronic
CAediting_1089373	chr16_12239759_+	intronic
CAediting_1089374	chr16_12239799_+	intronic
CAediting_1089375	chr16_12242677_+	intronic
CAediting_1089376	chr16_12242707_+	intronic
CAediting_1089377	chr16_12242723_+	intronic
CAediting_1089378	chr16_12242747_+	intronic
CAediting_1089379	chr16_12251889_+	intronic
CAediting_1089380	chr16_12251893_+	intronic
CAediting_1089381	chr16_12251944_+	intronic
CAediting_1089382	chr16_12251995_+	intronic
CAediting_1089383	chr16_12251999_+	intronic
CAediting_1089384	chr16_12265583_+	intronic
CAediting_1089385	chr16_12265614_+	intronic
CAediting_1089386	chr16_12265641_+	intronic
CAediting_1089387	chr16_12266160_+	intronic
CAediting_1089388	chr16_12266863_+	intronic
CAediting_1089389	chr16_12266864_+	intronic
CAediting_1089390	chr16_12266881_+	intronic
CAediting_1089391	chr16_12266903_+	intronic
CAediting_1089392	chr16_12280931_+	intronic
CAediting_1089393	chr16_12280939_+	intronic
CAediting_1089394	chr16_12280982_+	intronic
CAediting_1089395	chr16_12280987_+	intronic
CAediting_1089396	chr16_12281020_+	intronic
CAediting_1089397	chr16_12281815_+	intronic
CAediting_1089398	chr16_12281816_+	intronic
CAediting_1089399	chr16_12281861_+	intronic
CAediting_1089400	chr16_12281937_+	intronic
CAediting_1089401	chr16_12281963_+	intronic
CAediting_1089402	chr16_12281974_+	intronic
CAediting_1089403	chr16_12281991_+	intronic
CAediting_1089404	chr16_12281995_+	intronic
CAediting_1089405	chr16_12281999_+	intronic
CAediting_1089406	chr16_12282004_+	intronic
CAediting_1089407	chr16_12282005_+	intronic
CAediting_1089408	chr16_12282010_+	intronic
CAediting_1089409	chr16_12282012_+	intronic
CAediting_1089410	chr16_12282013_+	intronic
CAediting_1089411	chr16_12282029_+	intronic
CAediting_1089412	chr16_12282055_+	intronic
CAediting_1089413	chr16_12282735_+	intronic
CAediting_1089414	chr16_12282749_+	intronic
CAediting_1089415	chr16_12282756_+	intronic
CAediting_1089416	chr16_12282773_+	intronic
CAediting_1089417	chr16_12282797_+	intronic
CAediting_1089418	chr16_12288081_+	intronic
CAediting_1089419	chr16_12299071_+	intronic
CAediting_1089420	chr16_12305889_+	intronic
CAediting_1089421	chr16_12305898_+	intronic
CAediting_1089422	chr16_12305899_+	intronic
CAediting_1089423	chr16_12305901_+	intronic
CAediting_1089424	chr16_12305906_+	intronic
CAediting_1089425	chr16_12305936_+	intronic
CAediting_1089426	chr16_12305944_+	intronic
CAediting_1089427	chr16_12305945_+	intronic
CAediting_1089428	chr16_12305964_+	intronic
CAediting_1089429	chr16_12305969_+	intronic
CAediting_1089430	chr16_12305974_+	intronic
CAediting_1089431	chr16_12306026_+	intronic
CAediting_1089432	chr16_12306049_+	intronic
CAediting_1089433	chr16_12306364_+	intronic
CAediting_1089434	chr16_12306391_+	intronic
CAediting_1089435	chr16_12306439_+	intronic
CAediting_1089436	chr16_12306440_+	intronic
CAediting_1089437	chr16_12306449_+	intronic
CAediting_1089438	chr16_12306507_+	intronic
CAediting_1089439	chr16_12329197_+	intronic
CAediting_1089440	chr16_12331626_+	intronic
CAediting_1089441	chr16_12339184_+	intronic
CAediting_1089442	chr16_12339250_+	intronic
CAediting_1089443	chr16_12339251_+	intronic
CAediting_1089444	chr16_12364010_+	intronic
CAediting_1089445	chr16_12365601_+	intronic
CAediting_1089446	chr16_12365611_+	intronic
CAediting_1089447	chr16_12365921_+	intronic
CAediting_1089448	chr16_12365927_+	intronic
CAediting_1089449	chr16_12375939_+	ncRNA_exonic
CAediting_1089450	chr16_12376474_+	intronic
CAediting_1089451	chr16_12376480_+	intronic
CAediting_1089452	chr16_12376575_+	intronic
CAediting_1089453	chr16_12376576_+	intronic
CAediting_1089454	chr16_12376658_+	intronic
CAediting_1089455	chr16_12379357_+	intronic
CAediting_1089456	chr16_12391166_+	intronic
CAediting_1089457	chr16_12408064_+	intronic
CAediting_1089458	chr16_12408083_+	intronic
CAediting_1089459	chr16_12410508_+	intronic
CAediting_1089460	chr16_12410540_+	intronic
CAediting_1089461	chr16_12410656_+	intronic
CAediting_1089462	chr16_12442703_+	intronic
CAediting_1089463	chr16_12443550_+	intronic
CAediting_1089464	chr16_12443555_+	intronic
CAediting_1089465	chr16_12443636_+	intronic
CAediting_1089466	chr16_12443640_+	intronic
CAediting_1089467	chr16_12443671_+	intronic
CAediting_1089468	chr16_12446931_+	intronic
CAediting_1089469	chr16_12446932_+	intronic
CAediting_1089470	chr16_12446955_+	intronic
CAediting_1089471	chr16_12446964_+	intronic
CAediting_1089472	chr16_12446969_+	intronic
CAediting_1089473	chr16_12447000_+	intronic
CAediting_1089474	chr16_12447005_+	intronic
CAediting_1089475	chr16_12447006_+	intronic
CAediting_1089476	chr16_12447020_+	intronic
CAediting_1089477	chr16_12447046_+	intronic
CAediting_1089478	chr16_12447056_+	intronic
CAediting_1089479	chr16_12447073_+	intronic
CAediting_1089480	chr16_12447076_+	intronic
CAediting_1089481	chr16_12447082_+	intronic
CAediting_1089482	chr16_12447088_+	intronic
CAediting_1089483	chr16_12447108_+	intronic
CAediting_1089484	chr16_12461695_+	intronic
CAediting_1089485	chr16_12461755_+	intronic
CAediting_1089486	chr16_12461836_+	intronic
CAediting_1089487	chr16_12461862_+	intronic
CAediting_1089488	chr16_12495205_+	intronic
CAediting_1089489	chr16_12495973_+	intronic
CAediting_1089490	chr16_12501293_+	intronic
CAediting_1089491	chr16_12536790_+	intronic
CAediting_1089492	chr16_12536797_+	intronic
CAediting_1089493	chr16_12536917_+	intronic
CAediting_1089494	chr16_12537862_+	intronic
CAediting_1089495	chr16_12537864_+	intronic
CAediting_1089496	chr16_12537886_+	intronic
CAediting_1089497	chr16_12537926_+	intronic
CAediting_1089498	chr16_12538261_+	intronic
CAediting_1089499	chr16_12549295_+	intronic
CAediting_1089500	chr16_12549319_+	intronic
CAediting_1089501	chr16_12554060_+	intronic
CAediting_1089502	chr16_12554061_+	intronic
CAediting_1089503	chr16_12555572_+	intronic
CAediting_1089504	chr16_12555626_+	intronic
CAediting_1089505	chr16_12555634_+	intronic
CAediting_1089506	chr16_12555635_+	intronic
CAediting_1089507	chr16_12555670_+	intronic
CAediting_1089508	chr16_12555694_+	intronic
CAediting_1089509	chr16_12555859_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1089147	chr16_11979089_+	SINE	Alu	AluSx1
CAediting_1089148	chr16_11979098_+	SINE	Alu	AluSx1
CAediting_1089149	chr16_11979110_+	SINE	Alu	AluSx1
CAediting_1089150	chr16_11979116_+	SINE	Alu	AluSx1
CAediting_1089151	chr16_11979138_+	SINE	Alu	AluSx1
CAediting_1089152	chr16_11979155_+	SINE	Alu	AluSx1
CAediting_1089153	chr16_11979177_+	SINE	Alu	AluSx1
CAediting_1089154	chr16_11979623_+	SINE	Alu	AluSx
CAediting_1089155	chr16_11979663_+	SINE	Alu	AluSx
CAediting_1089156	chr16_11979709_+	SINE	Alu	AluSx
CAediting_1089157	chr16_11979713_+	SINE	Alu	AluSx
CAediting_1089158	chr16_11979767_+	SINE	Alu	AluSx
CAediting_1089159	chr16_11984120_+	SINE	Alu	AluJb
CAediting_1089160	chr16_11984246_+	SINE	Alu	AluJb
CAediting_1089161	chr16_11984281_+	SINE	Alu	AluJb
CAediting_1089162	chr16_11984286_+	SINE	Alu	AluJb
CAediting_1089163	chr16_11984294_+	SINE	Alu	AluJb
CAediting_1089164	chr16_11984305_+	SINE	Alu	AluJb
CAediting_1089165	chr16_11984857_+	SINE	Alu	AluJr
CAediting_1089166	chr16_11984923_+	SINE	Alu	AluJr
CAediting_1089167	chr16_11984929_+	SINE	Alu	AluJr
CAediting_1089168	chr16_11986818_+	DNA	hAT-Charlie	MER58A
CAediting_1089169	chr16_12001959_+	SINE	Alu	AluJr
CAediting_1089170	chr16_12007449_+	SINE	Alu	AluSz
CAediting_1089171	chr16_12011503_+	SINE	Alu	AluSx
CAediting_1089172	chr16_12013389_+	SINE	Alu	AluSz
CAediting_1089173	chr16_12013464_+	SINE	Alu	AluSz
CAediting_1089174	chr16_12014494_+	SINE	Alu	AluSp
CAediting_1089175	chr16_12014518_+	SINE	Alu	AluSp
CAediting_1089176	chr16_12014572_+	SINE	Alu	AluSp
CAediting_1089177	chr16_12014574_+	SINE	Alu	AluSp
CAediting_1089178	chr16_12014582_+	SINE	Alu	AluSp
CAediting_1089179	chr16_12014612_+	SINE	Alu	AluSp
CAediting_1089180	chr16_12014625_+	SINE	Alu	AluSp
CAediting_1089181	chr16_12014638_+	SINE	Alu	AluSp
CAediting_1089182	chr16_12014652_+	SINE	Alu	AluSp
CAediting_1089183	chr16_12017953_+	SINE	Alu	AluSx1
CAediting_1089184	chr16_12017962_+	SINE	Alu	AluSx1
CAediting_1089185	chr16_12023457_+	SINE	Alu	AluJr
CAediting_1089186	chr16_12023498_+	SINE	Alu	AluJr
CAediting_1089187	chr16_12023566_+	SINE	Alu	AluJr
CAediting_1089188	chr16_12028878_+	SINE	Alu	AluSq2
CAediting_1089189	chr16_12032882_+	SINE	Alu	AluSz
CAediting_1089190	chr16_12033736_+	SINE	Alu	AluSx
CAediting_1089191	chr16_12035324_+	SINE	Alu	AluJb
CAediting_1089192	chr16_12036152_+	SINE	Alu	AluJo
CAediting_1089193	chr16_12036160_+	SINE	Alu	AluJo
CAediting_1089194	chr16_12036162_+	SINE	Alu	AluJo
CAediting_1089195	chr16_12037765_+	SINE	Alu	AluJr
CAediting_1089196	chr16_12037773_+	SINE	Alu	AluJr
CAediting_1089197	chr16_12037834_+	SINE	Alu	AluJr
CAediting_1089198	chr16_12037865_+	SINE	Alu	AluJr
CAediting_1089199	chr16_12052400_+	SINE	Alu	AluSx1
CAediting_1089200	chr16_12052402_+	SINE	Alu	AluSx1
CAediting_1089201	chr16_12053148_+	SINE	Alu	AluSp
CAediting_1089202	chr16_12053152_+	SINE	Alu	AluSp
CAediting_1089203	chr16_12053174_+	SINE	Alu	AluSp
CAediting_1089204	chr16_12053201_+	SINE	Alu	AluSp
CAediting_1089205	chr16_12053233_+	SINE	Alu	AluSp
CAediting_1089206	chr16_12053234_+	SINE	Alu	AluSp
CAediting_1089207	chr16_12062218_+	SINE	Alu	AluSx
CAediting_1089208	chr16_12068295_+	SINE	Alu	AluJb
CAediting_1089209	chr16_12068353_+	SINE	Alu	AluJb
CAediting_1089210	chr16_12080753_+	SINE	Alu	AluSq2
CAediting_1089211	chr16_12080756_+	SINE	Alu	AluSq2
CAediting_1089212	chr16_12080761_+	SINE	Alu	AluSq2
CAediting_1089213	chr16_12080791_+	SINE	Alu	AluSq2
CAediting_1089214	chr16_12081529_+	SINE	Alu	AluSx1
CAediting_1089215	chr16_12081551_+	SINE	Alu	AluSx1
CAediting_1089216	chr16_12081552_+	SINE	Alu	AluSx1
CAediting_1089217	chr16_12081557_+	SINE	Alu	AluSx1
CAediting_1089218	chr16_12081561_+	SINE	Alu	AluSx1
CAediting_1089219	chr16_12081574_+	SINE	Alu	AluSx1
CAediting_1089220	chr16_12081579_+	SINE	Alu	AluSx1
CAediting_1089221	chr16_12081591_+	SINE	Alu	AluSx1
CAediting_1089222	chr16_12081592_+	SINE	Alu	AluSx1
CAediting_1089223	chr16_12081593_+	SINE	Alu	AluSx1
CAediting_1089224	chr16_12081623_+	SINE	Alu	AluSx1
CAediting_1089225	chr16_12083144_+	SINE	Alu	AluSx1
CAediting_1089226	chr16_12083212_+	SINE	Alu	AluSx1
CAediting_1089227	chr16_12084245_+	SINE	Alu	AluSq4
CAediting_1089228	chr16_12084275_+	SINE	Alu	AluSq4
CAediting_1089229	chr16_12084285_+	SINE	Alu	AluSq4
CAediting_1089230	chr16_12084797_+	SINE	Alu	AluJr
CAediting_1089231	chr16_12084807_+	SINE	Alu	AluJr
CAediting_1089232	chr16_12084887_+	SINE	Alu	AluJr
CAediting_1089233	chr16_12084920_+	SINE	Alu	AluJr
CAediting_1089234	chr16_12084931_+	SINE	Alu	AluJr
CAediting_1089235	chr16_12084943_+	SINE	Alu	AluJr
CAediting_1089236	chr16_12084949_+	SINE	Alu	AluJr
CAediting_1089237	chr16_12084955_+	SINE	Alu	AluJr
CAediting_1089238	chr16_12084959_+	SINE	Alu	AluJr
CAediting_1089239	chr16_12084960_+	SINE	Alu	AluJr
CAediting_1089240	chr16_12084976_+	SINE	Alu	AluJr
CAediting_1089241	chr16_12084979_+	SINE	Alu	AluJr
CAediting_1089242	chr16_12084990_+	SINE	Alu	AluJr
CAediting_1089243	chr16_12085003_+	SINE	Alu	AluJr
CAediting_1089244	chr16_12085011_+	SINE	Alu	AluJr
CAediting_1089245	chr16_12085015_+	SINE	Alu	AluJr
CAediting_1089246	chr16_12085025_+	SINE	Alu	AluJr
CAediting_1089247	chr16_12085407_+	SINE	Alu	AluSx
CAediting_1089248	chr16_12085420_+	SINE	Alu	AluSx
CAediting_1089249	chr16_12085507_+	SINE	Alu	AluSx
CAediting_1089250	chr16_12085527_+	SINE	Alu	AluSx
CAediting_1089251	chr16_12086266_+	SINE	Alu	AluY
CAediting_1089253	chr16_12090930_+	SINE	Alu	AluSx
CAediting_1089254	chr16_12090944_+	SINE	Alu	AluSx
CAediting_1089255	chr16_12090970_+	SINE	Alu	AluSx
CAediting_1089256	chr16_12105364_+	SINE	Alu	AluSx3
CAediting_1089257	chr16_12105372_+	SINE	Alu	AluSx3
CAediting_1089258	chr16_12108859_+	SINE	Alu	AluSg4
CAediting_1089259	chr16_12108902_+	SINE	Alu	AluSg4
CAediting_1089260	chr16_12108949_+	SINE	Alu	AluSg4
CAediting_1089261	chr16_12109029_+	SINE	Alu	AluSg4
CAediting_1089262	chr16_12109043_+	SINE	Alu	AluSg4
CAediting_1089263	chr16_12109048_+	SINE	Alu	AluSg4
CAediting_1089264	chr16_12109049_+	SINE	Alu	AluSg4
CAediting_1089265	chr16_12109830_+	SINE	Alu	AluSg
CAediting_1089266	chr16_12109831_+	SINE	Alu	AluSg
CAediting_1089267	chr16_12130010_+	SINE	Alu	AluSc8
CAediting_1089268	chr16_12130059_+	SINE	Alu	AluSc8
CAediting_1089269	chr16_12130221_+	SINE	Alu	AluY
CAediting_1089270	chr16_12130222_+	SINE	Alu	AluY
CAediting_1089271	chr16_12130228_+	SINE	Alu	AluY
CAediting_1089272	chr16_12130289_+	SINE	Alu	AluY
CAediting_1089273	chr16_12130328_+	SINE	Alu	AluY
CAediting_1089274	chr16_12130364_+	SINE	Alu	AluY
CAediting_1089275	chr16_12130381_+	SINE	Alu	AluY
CAediting_1089276	chr16_12130395_+	SINE	Alu	AluY
CAediting_1089277	chr16_12132160_+	SINE	Alu	AluSx1
CAediting_1089278	chr16_12133542_+	SINE	Alu	AluJb
CAediting_1089279	chr16_12133559_+	SINE	Alu	AluJb
CAediting_1089280	chr16_12136869_+	SINE	Alu	AluSx1
CAediting_1089281	chr16_12138391_+	SINE	Alu	AluSz
CAediting_1089282	chr16_12138393_+	SINE	Alu	AluSz
CAediting_1089283	chr16_12138446_+	SINE	Alu	AluSz
CAediting_1089284	chr16_12138947_+	SINE	Alu	AluSx
CAediting_1089285	chr16_12138954_+	SINE	Alu	AluSx
CAediting_1089286	chr16_12138974_+	SINE	Alu	AluSx
CAediting_1089287	chr16_12138983_+	SINE	Alu	AluSx
CAediting_1089288	chr16_12138992_+	SINE	Alu	AluSx
CAediting_1089289	chr16_12138999_+	SINE	Alu	AluSx
CAediting_1089290	chr16_12139016_+	SINE	Alu	AluSx
CAediting_1089291	chr16_12139037_+	SINE	Alu	AluSx
CAediting_1089292	chr16_12139075_+	SINE	Alu	AluSx
CAediting_1089293	chr16_12139081_+	SINE	Alu	AluSx
CAediting_1089294	chr16_12139082_+	SINE	Alu	AluSx
CAediting_1089295	chr16_12139105_+	SINE	Alu	AluSx
CAediting_1089296	chr16_12139113_+	SINE	Alu	AluSx
CAediting_1089297	chr16_12139130_+	SINE	Alu	AluSx
CAediting_1089298	chr16_12139709_+	SINE	Alu	AluJb
CAediting_1089299	chr16_12139729_+	SINE	Alu	AluJb
CAediting_1089300	chr16_12139732_+	SINE	Alu	AluJb
CAediting_1089301	chr16_12139766_+	SINE	Alu	AluJb
CAediting_1089302	chr16_12139819_+	SINE	Alu	AluJb
CAediting_1089303	chr16_12139828_+	SINE	Alu	AluJb
CAediting_1089304	chr16_12139834_+	SINE	Alu	AluJb
CAediting_1089305	chr16_12139874_+	SINE	Alu	AluJb
CAediting_1089306	chr16_12139896_+	SINE	Alu	AluJb
CAediting_1089307	chr16_12139906_+	SINE	Alu	AluJb
CAediting_1089308	chr16_12139915_+	SINE	Alu	AluJb
CAediting_1089309	chr16_12139926_+	SINE	Alu	AluJb
CAediting_1089310	chr16_12139931_+	SINE	Alu	AluJb
CAediting_1089311	chr16_12142689_+	SINE	Alu	AluSq
CAediting_1089312	chr16_12142746_+	SINE	Alu	AluSq
CAediting_1089313	chr16_12151901_+	SINE	Alu	AluSx
CAediting_1089314	chr16_12152074_+	SINE	Alu	AluJb
CAediting_1089315	chr16_12152090_+	SINE	Alu	AluJb
CAediting_1089316	chr16_12152100_+	SINE	Alu	AluJb
CAediting_1089317	chr16_12152165_+	SINE	Alu	AluJb
CAediting_1089318	chr16_12153548_+	SINE	Alu	AluSz
CAediting_1089319	chr16_12173922_+	SINE	Alu	AluSz
CAediting_1089320	chr16_12175419_+	SINE	Alu	AluSz
CAediting_1089321	chr16_12175446_+	SINE	Alu	AluSz
CAediting_1089322	chr16_12175451_+	SINE	Alu	AluSz
CAediting_1089323	chr16_12175504_+	SINE	Alu	AluSz
CAediting_1089324	chr16_12175524_+	SINE	Alu	AluSz
CAediting_1089325	chr16_12175531_+	SINE	Alu	AluSz
CAediting_1089326	chr16_12175540_+	SINE	Alu	AluSz
CAediting_1089327	chr16_12175560_+	SINE	Alu	AluSz
CAediting_1089328	chr16_12175571_+	SINE	Alu	AluSz
CAediting_1089329	chr16_12175885_+	SINE	Alu	AluJr4
CAediting_1089330	chr16_12179466_+	SINE	Alu	AluJo
CAediting_1089331	chr16_12182121_+	SINE	Alu	AluSx
CAediting_1089332	chr16_12182778_+	SINE	Alu	AluSx1
CAediting_1089333	chr16_12182779_+	SINE	Alu	AluSx1
CAediting_1089334	chr16_12182783_+	SINE	Alu	AluSx1
CAediting_1089335	chr16_12182787_+	SINE	Alu	AluSx1
CAediting_1089336	chr16_12182791_+	SINE	Alu	AluSx1
CAediting_1089337	chr16_12182813_+	SINE	Alu	AluSx1
CAediting_1089338	chr16_12182823_+	SINE	Alu	AluSx1
CAediting_1089339	chr16_12182854_+	SINE	Alu	AluSx1
CAediting_1089340	chr16_12182855_+	SINE	Alu	AluSx1
CAediting_1089341	chr16_12182862_+	SINE	Alu	AluSx1
CAediting_1089342	chr16_12183027_+	SINE	Alu	AluJo
CAediting_1089343	chr16_12183062_+	SINE	Alu	AluJo
CAediting_1089344	chr16_12183099_+	SINE	Alu	AluJo
CAediting_1089345	chr16_12183100_+	SINE	Alu	AluJo
CAediting_1089346	chr16_12183125_+	SINE	Alu	AluJo
CAediting_1089347	chr16_12183126_+	SINE	Alu	AluJo
CAediting_1089348	chr16_12183139_+	SINE	Alu	AluJo
CAediting_1089349	chr16_12192568_+	SINE	Alu	AluJo
CAediting_1089350	chr16_12192581_+	SINE	Alu	AluJo
CAediting_1089351	chr16_12193350_+	SINE	Alu	AluSq
CAediting_1089352	chr16_12197503_+	SINE	Alu	AluSx1
CAediting_1089353	chr16_12209329_+	SINE	Alu	AluSz6
CAediting_1089354	chr16_12209373_+	SINE	Alu	AluSz6
CAediting_1089355	chr16_12222672_+	SINE	Alu	AluSx1
CAediting_1089356	chr16_12222702_+	SINE	Alu	AluSx1
CAediting_1089357	chr16_12222789_+	SINE	Alu	AluSx1
CAediting_1089358	chr16_12223185_+	SINE	MIR	MIR
CAediting_1089359	chr16_12226787_+	SINE	Alu	AluSx
CAediting_1089360	chr16_12227690_+	SINE	Alu	AluSx
CAediting_1089361	chr16_12227779_+	SINE	Alu	AluSx
CAediting_1089362	chr16_12227780_+	SINE	Alu	AluSx
CAediting_1089363	chr16_12227785_+	SINE	Alu	AluSx
CAediting_1089364	chr16_12227819_+	SINE	Alu	AluSx
CAediting_1089365	chr16_12227820_+	SINE	Alu	AluSx
CAediting_1089366	chr16_12238478_+	SINE	Alu	AluSz
CAediting_1089367	chr16_12239572_+	SINE	Alu	AluJb
CAediting_1089368	chr16_12239596_+	SINE	Alu	AluJb
CAediting_1089369	chr16_12239722_+	SINE	Alu	AluJb
CAediting_1089370	chr16_12239726_+	SINE	Alu	AluJb
CAediting_1089371	chr16_12239729_+	SINE	Alu	AluJb
CAediting_1089372	chr16_12239745_+	SINE	Alu	AluJb
CAediting_1089373	chr16_12239759_+	SINE	Alu	AluJb
CAediting_1089374	chr16_12239799_+	SINE	Alu	AluJb
CAediting_1089375	chr16_12242677_+	SINE	Alu	AluJb
CAediting_1089376	chr16_12242707_+	SINE	Alu	AluJb
CAediting_1089377	chr16_12242723_+	SINE	Alu	AluJb
CAediting_1089378	chr16_12242747_+	SINE	Alu	AluJb
CAediting_1089379	chr16_12251889_+	SINE	Alu	AluJr4
CAediting_1089380	chr16_12251893_+	SINE	Alu	AluJr4
CAediting_1089381	chr16_12251944_+	SINE	Alu	AluJr4
CAediting_1089382	chr16_12251995_+	SINE	Alu	AluJr4
CAediting_1089383	chr16_12251999_+	SINE	Alu	AluJr4
CAediting_1089384	chr16_12265583_+	SINE	Alu	AluJb
CAediting_1089385	chr16_12265614_+	SINE	Alu	AluJb
CAediting_1089386	chr16_12265641_+	SINE	Alu	AluJb
CAediting_1089387	chr16_12266160_+	SINE	Alu	FLAM_C
CAediting_1089388	chr16_12266863_+	SINE	Alu	AluSx1
CAediting_1089389	chr16_12266864_+	SINE	Alu	AluSx1
CAediting_1089390	chr16_12266881_+	SINE	Alu	AluSx1
CAediting_1089391	chr16_12266903_+	SINE	Alu	AluSx1
CAediting_1089392	chr16_12280931_+	SINE	Alu	AluJr
CAediting_1089393	chr16_12280939_+	SINE	Alu	AluJr
CAediting_1089394	chr16_12280982_+	SINE	Alu	AluJr
CAediting_1089395	chr16_12280987_+	SINE	Alu	AluJr
CAediting_1089396	chr16_12281020_+	SINE	Alu	AluJr
CAediting_1089397	chr16_12281815_+	SINE	Alu	AluSz
CAediting_1089398	chr16_12281816_+	SINE	Alu	AluSz
CAediting_1089399	chr16_12281861_+	SINE	Alu	AluSz
CAediting_1089400	chr16_12281937_+	SINE	Alu	AluSz
CAediting_1089401	chr16_12281963_+	SINE	Alu	AluSz
CAediting_1089402	chr16_12281974_+	SINE	Alu	AluSz
CAediting_1089403	chr16_12281991_+	SINE	Alu	AluSz
CAediting_1089404	chr16_12281995_+	SINE	Alu	AluSz
CAediting_1089405	chr16_12281999_+	SINE	Alu	AluSz
CAediting_1089406	chr16_12282004_+	SINE	Alu	AluSz
CAediting_1089407	chr16_12282005_+	SINE	Alu	AluSz
CAediting_1089408	chr16_12282010_+	SINE	Alu	AluSz
CAediting_1089409	chr16_12282012_+	SINE	Alu	AluSz
CAediting_1089410	chr16_12282013_+	SINE	Alu	AluSz
CAediting_1089411	chr16_12282029_+	SINE	Alu	AluSz
CAediting_1089412	chr16_12282055_+	SINE	Alu	AluSz
CAediting_1089413	chr16_12282735_+	SINE	Alu	AluSq2
CAediting_1089414	chr16_12282749_+	SINE	Alu	AluSq2
CAediting_1089415	chr16_12282756_+	SINE	Alu	AluSq2
CAediting_1089416	chr16_12282773_+	SINE	Alu	AluSq2
CAediting_1089417	chr16_12282797_+	SINE	Alu	AluSq2
CAediting_1089418	chr16_12288081_+	SINE	Alu	AluJr
CAediting_1089419	chr16_12299071_+	SINE	Alu	AluSz
CAediting_1089439	chr16_12329197_+	SINE	Alu	AluJr
CAediting_1089440	chr16_12331626_+	SINE	Alu	AluSx1
CAediting_1089441	chr16_12339184_+	SINE	Alu	AluSx
CAediting_1089442	chr16_12339250_+	SINE	Alu	AluSx
CAediting_1089443	chr16_12339251_+	SINE	Alu	AluSx
CAediting_1089444	chr16_12364010_+	SINE	Alu	AluJr4
CAediting_1089445	chr16_12365601_+	SINE	Alu	AluSz
CAediting_1089446	chr16_12365611_+	SINE	Alu	AluSz
CAediting_1089447	chr16_12365921_+	SINE	Alu	AluY
CAediting_1089448	chr16_12365927_+	SINE	Alu	AluY
CAediting_1089449	chr16_12375939_+	SINE	Alu	AluSz
CAediting_1089450	chr16_12376474_+	SINE	Alu	AluSx1
CAediting_1089451	chr16_12376480_+	SINE	Alu	AluSx1
CAediting_1089452	chr16_12376575_+	SINE	Alu	AluSx1
CAediting_1089453	chr16_12376576_+	SINE	Alu	AluSx1
CAediting_1089454	chr16_12376658_+	SINE	Alu	AluSx1
CAediting_1089455	chr16_12379357_+	SINE	Alu	AluJr
CAediting_1089456	chr16_12391166_+	SINE	Alu	AluJr
CAediting_1089457	chr16_12408064_+	SINE	Alu	AluJo
CAediting_1089458	chr16_12408083_+	SINE	Alu	AluJo
CAediting_1089459	chr16_12410508_+	SINE	Alu	AluJr
CAediting_1089460	chr16_12410540_+	SINE	Alu	AluJr
CAediting_1089461	chr16_12410656_+	SINE	Alu	AluJr
CAediting_1089462	chr16_12442703_+	SINE	Alu	AluJo
CAediting_1089463	chr16_12443550_+	SINE	Alu	AluSx
CAediting_1089464	chr16_12443555_+	SINE	Alu	AluSx
CAediting_1089465	chr16_12443636_+	SINE	Alu	AluSx
CAediting_1089466	chr16_12443640_+	SINE	Alu	AluSx
CAediting_1089467	chr16_12443671_+	SINE	Alu	AluSx
CAediting_1089468	chr16_12446931_+	SINE	Alu	AluSz
CAediting_1089469	chr16_12446932_+	SINE	Alu	AluSz
CAediting_1089470	chr16_12446955_+	SINE	Alu	AluSz
CAediting_1089471	chr16_12446964_+	SINE	Alu	AluSz
CAediting_1089472	chr16_12446969_+	SINE	Alu	AluSz
CAediting_1089473	chr16_12447000_+	SINE	Alu	AluSz
CAediting_1089474	chr16_12447005_+	SINE	Alu	AluSz
CAediting_1089475	chr16_12447006_+	SINE	Alu	AluSz
CAediting_1089476	chr16_12447020_+	SINE	Alu	AluSz
CAediting_1089477	chr16_12447046_+	SINE	Alu	AluSz
CAediting_1089478	chr16_12447056_+	SINE	Alu	AluSz
CAediting_1089479	chr16_12447073_+	SINE	Alu	AluSz
CAediting_1089480	chr16_12447076_+	SINE	Alu	AluSz
CAediting_1089481	chr16_12447082_+	SINE	Alu	AluSz
CAediting_1089482	chr16_12447088_+	SINE	Alu	AluSz
CAediting_1089483	chr16_12447108_+	SINE	Alu	AluSz
CAediting_1089484	chr16_12461695_+	SINE	Alu	AluSx1
CAediting_1089485	chr16_12461755_+	SINE	Alu	AluSx1
CAediting_1089486	chr16_12461836_+	SINE	Alu	AluSx1
CAediting_1089487	chr16_12461862_+	SINE	Alu	AluSx1
CAediting_1089488	chr16_12495205_+	SINE	Alu	AluSz
CAediting_1089489	chr16_12495973_+	SINE	Alu	AluSx1
CAediting_1089490	chr16_12501293_+	SINE	Alu	AluJo
CAediting_1089491	chr16_12536790_+	SINE	Alu	AluSg
CAediting_1089492	chr16_12536797_+	SINE	Alu	AluSg
CAediting_1089493	chr16_12536917_+	SINE	Alu	AluSg
CAediting_1089494	chr16_12537862_+	SINE	Alu	AluSx3
CAediting_1089495	chr16_12537864_+	SINE	Alu	AluSx3
CAediting_1089496	chr16_12537886_+	SINE	Alu	AluSx3
CAediting_1089497	chr16_12537926_+	SINE	Alu	AluSx3
CAediting_1089498	chr16_12538261_+	SINE	Alu	AluY
CAediting_1089499	chr16_12549295_+	SINE	Alu	AluSz
CAediting_1089500	chr16_12549319_+	SINE	Alu	AluSz
CAediting_1089501	chr16_12554060_+	SINE	Alu	AluSx1
CAediting_1089502	chr16_12554061_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for SNX29

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000048471.12.SNX29.

Correlation between RNA A-to-I editing and PSI for ENSG00000048471.12.SNX29.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SNX29

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SNX29

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SNX29

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000048471.12	ENST00000569801	hsa-miR-4477b	12042926	12042932	7mer-m8	12042912	12042933	154	-16.59
CAediting_846604	chr11_93733708_-	ENSG00000048471.12	ENST00000564791	hsa-miR-1304-3p	12527303	12527310	8mer-1a	12527289	12527310	142	-17.21
CAediting_1229415	chr17_67471547_+	ENSG00000048471.12	ENST00000564791	hsa-miR-548aa	12527111	12527117	7mer-m8	12527095	12527118	158	-11.95
CAediting_604450	chr7_133034877_-	ENSG00000048471.12	ENST00000562510	hsa-miR-3654	12443059	12443065	7mer-m8	12443048	12443066	140	-19.95
CAediting_1524209	chrX_134546392_-	ENSG00000048471.12	ENST00000564791	hsa-miR-503-5p	12526751	12526757	7mer-m8	12526736	12526758	146	-19.83

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000048471.12	ENST00000564791	hsa-miR-4423-3p	12526941	12526948	8mer-1a	12526929	12526948	153	-12.62

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SNX29

- RNA A-to-I editing in mRNA.
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ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SNX29

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_1089408	chr16_12282010_+	0.0101705671579184	0.343798384053102	.	.	.	.

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Relation with cancer stages for SNX29

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for SNX29

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SNX29

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SNX29

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene