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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: COG7 (CAeditome ID:91949)

Gene summary for COG7

check button Gene summary
Gene informationGene symbol

COG7

Gene ID

91949

Gene namecomponent of oligomeric golgi complex 7
SynonymsCDG2E
Cytomap

16p12.2

Type of geneprotein-coding
Descriptionconserved oligomeric Golgi complex subunit 7COG complex subunit 7
Modification date20210518
UniProtAcc

P83436

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
COG7

GO:0005730

Conserved oligomeric Golgi complex subunit 7

0000052

COG7

GO:0005794

Conserved oligomeric Golgi complex subunit 7

0000052

COG7

GO:0005794

Conserved oligomeric Golgi complex subunit 7

11980916

COG7

GO:0005794

Conserved oligomeric Golgi complex subunit 7

11980916

COG7

GO:0043231

Conserved oligomeric Golgi complex subunit 7

0000052

COG7

GO:0017119

Conserved oligomeric Golgi complex subunit 7

15047703


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RNA A-to-I events for COG7

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000168434.11
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1101931(23388658, -), CAediting_1101932(23388660, -), CAediting_1101933(23388695, -), CAediting_1101934(23388697, -), CAediting_1101935(23388706, -), CAediting_1101936(23388709, -), CAediting_1101937(23388729, -), CAediting_1101938(23388750, -), CAediting_1101939(23388756, -), CAediting_1101940(23388767, -), CAediting_1101941(23388772, -), CAediting_1101942(23388773, -), CAediting_1101943(23390216, -), CAediting_1101944(23390324, -), CAediting_1101945(23390340, -), CAediting_1101946(23394878, -), CAediting_1101947(23394902, -), CAediting_1101948(23394903, -), CAediting_1101949(23394934, -), CAediting_1101950(23394943, -), CAediting_1101951(23394944, -), CAediting_1101952(23395081, -), CAediting_1101953(23395082, -), CAediting_1101954(23395090, -), CAediting_1101955(23396462, -), CAediting_1101956(23396539, -), CAediting_1101957(23396544, -), CAediting_1101958(23396555, -), CAediting_1101959(23396557, -), CAediting_1101960(23396567, -), CAediting_1101961(23396603, -), CAediting_1101962(23396616, -), CAediting_1101963(23396617, -), CAediting_1101964(23397108, -), CAediting_1101965(23397182, -), CAediting_1101966(23397184, -), CAediting_1101967(23405569, -), CAediting_1101968(23417519, -), CAediting_1101969(23417564, -), CAediting_1101970(23417575, -), CAediting_1101971(23417637, -), CAediting_1101972(23417640, -), CAediting_1101973(23417647, -), CAediting_1101974(23417695, -), CAediting_1101975(23417701, -), CAediting_1101976(23417711, -), CAediting_1101977(23417714, -), CAediting_1101978(23417732, -), CAediting_1101979(23417791, -), CAediting_1101980(23418248, -), CAediting_1101981(23418252, -), CAediting_1101982(23418257, -), CAediting_1101983(23418284, -), CAediting_1101984(23418287, -), CAediting_1101985(23418302, -), CAediting_1101986(23418313, -), CAediting_1101987(23418396, -), CAediting_1101988(23418436, -), CAediting_1101989(23419162, -), CAediting_1101990(23419283, -), CAediting_1101991(23419351, -), CAediting_1101992(23419359, -), CAediting_1101993(23419532, -), CAediting_1101994(23419625, -), CAediting_1101995(23419705, -), CAediting_1101996(23419934, -), CAediting_1101997(23419975, -), CAediting_1101998(23419993, -), CAediting_1101999(23420007, -), CAediting_1102000(23420020, -), CAediting_1102001(23420034, -), CAediting_1102002(23420059, -), CAediting_1102003(23420741, -), CAediting_1102004(23420742, -), CAediting_1102005(23420744, -), CAediting_1102006(23420747, -), CAediting_1102007(23420750, -), CAediting_1102008(23420782, -), CAediting_1102009(23420801, -), CAediting_1102010(23420804, -), CAediting_1102011(23420823, -), CAediting_1102012(23420827, -), CAediting_1102013(23420828, -), CAediting_1102014(23420841, -), CAediting_1102015(23420849, -), CAediting_1102016(23420851, -), CAediting_1102017(23420865, -), CAediting_1102018(23420868, -), CAediting_1102019(23420872, -), CAediting_1102020(23420876, -), CAediting_1102021(23420888, -), CAediting_1102022(23420890, -), CAediting_1102023(23420892, -), CAediting_1102024(23420895, -), CAediting_1102025(23420898, -), CAediting_1102026(23420904, -), CAediting_1102027(23420908, -), CAediting_1102028(23420911, -), CAediting_1102029(23420912, -), CAediting_1102030(23420913, -), CAediting_1102031(23420915, -), CAediting_1102032(23420916, -), CAediting_1102033(23420917, -), CAediting_1102034(23420918, -), CAediting_1102035(23420919, -), CAediting_1102036(23420920, -), CAediting_1102037(23420922, -), CAediting_1102038(23420923, -), CAediting_1102039(23420924, -), CAediting_1102040(23420925, -), CAediting_1102041(23420926, -), CAediting_1102042(23420927, -), CAediting_1102043(23420928, -), CAediting_1102044(23420929, -), CAediting_1102045(23420930, -), CAediting_1102046(23420931, -), CAediting_1102047(23420936, -), CAediting_1102048(23420942, -), CAediting_1102049(23420953, -), CAediting_1102050(23420955, -), CAediting_1102051(23420969, -), CAediting_1102052(23420977, -), CAediting_1102053(23420982, -), CAediting_1102054(23420995, -), CAediting_1102055(23421000, -), CAediting_1102056(23421001, -), CAediting_1102057(23421014, -), CAediting_1102058(23421017, -), CAediting_1102059(23421022, -), CAediting_1102060(23421023, -), CAediting_1102061(23421029, -), CAediting_1102062(23421041, -), CAediting_1102063(23421045, -), CAediting_1102064(23422106, -), CAediting_1102065(23422107, -), CAediting_1102066(23422182, -), CAediting_1102067(23422190, -), CAediting_1102068(23422200, -), CAediting_1102069(23422229, -), CAediting_1102070(23422768, -), CAediting_1102071(23422777, -), CAediting_1102072(23422786, -), CAediting_1102073(23422791, -), CAediting_1102074(23422795, -), CAediting_1102075(23422798, -), CAediting_1102076(23422799, -), CAediting_1102077(23422838, -), CAediting_1102078(23422839, -), CAediting_1102079(23422840, -), CAediting_1102080(23422877, -), CAediting_1102081(23422880, -), CAediting_1102082(23422897, -), CAediting_1102083(23422917, -), CAediting_1102084(23422921, -), CAediting_1102085(23422923, -), CAediting_1102086(23422933, -), CAediting_1102087(23422936, -), CAediting_1102088(23422962, -), CAediting_1102089(23422988, -), CAediting_1102090(23423019, -), CAediting_1102091(23423109, -), CAediting_1102092(23423131, -), CAediting_1102093(23423149, -), CAediting_1102094(23423200, -), CAediting_1102095(23423203, -), CAediting_1102096(23423224, -), CAediting_1102097(23423232, -), CAediting_1102098(23423243, -), CAediting_1102099(23423245, -), CAediting_1102100(23423248, -), CAediting_1102101(23423255, -), CAediting_1102102(23423258, -), CAediting_1102103(23423285, -), CAediting_1102104(23423304, -), CAediting_1102105(23423341, -), CAediting_1102106(23423351, -), CAediting_1102107(23424189, -), CAediting_1102108(23426129, -), CAediting_1102109(23428872, -), CAediting_1102110(23428875, -), CAediting_1102111(23429170, -), CAediting_1102112(23429285, -), CAediting_1102113(23430236, -), CAediting_1102114(23430346, -), CAediting_1102115(23430393, -), CAediting_1102116(23432116, -), CAediting_1102117(23433183, -), CAediting_1102118(23435255, -), CAediting_1102119(23438450, -), CAediting_1102120(23440566, -), CAediting_1102121(23440569, -), CAediting_1102122(23444587, -), CAediting_1102123(23444596, -), CAediting_1102124(23444601, -), CAediting_1102125(23444632, -), CAediting_1102126(23444642, -), CAediting_1102127(23444650, -), CAediting_1102128(23446524, -), CAediting_1102129(23446548, -), CAediting_1102130(23446549, -), CAediting_1102131(23446554, -), CAediting_1102132(23446576, -), CAediting_1102133(23446588, -), CAediting_1102134(23446589, -), CAediting_1102135(23446592, -), CAediting_1102136(23446615, -), CAediting_1102137(23446625, -), CAediting_1102138(23446627, -), CAediting_1102139(23446725, -), CAediting_1102140(23446789, -), CAediting_1102141(23446849, -), CAediting_1102142(23446854, -), CAediting_1102143(23447000, -), CAediting_1102144(23447029, -), CAediting_1102145(23447297, -), CAediting_1102146(23447304, -), CAediting_1102147(23447309, -), CAediting_1102148(23447314, -), CAediting_1102149(23447375, -), CAediting_1102150(23447379, -), CAediting_1102151(23447380, -), CAediting_1102152(23447381, -), CAediting_1102153(23448381, -), CAediting_1102154(23448392, -), CAediting_1102155(23448437, -), CAediting_1102156(23448493, -), CAediting_1102157(23448494, -), CAediting_1102158(23448497, -), CAediting_1102159(23448504, -), CAediting_1102160(23448561, -), CAediting_1102161(23448567, -), CAediting_1102162(23450931, -), CAediting_1102163(23451457, -), CAediting_1102164(23451496, -), CAediting_1102165(23451596, -), CAediting_1102166(23451598, -), CAediting_1102167(23451608, -), CAediting_1102168(23451612, -), CAediting_1102169(23451634, -), CAediting_1102170(23452387, -), CAediting_1102171(23452457, -), CAediting_1102172(23452505, -),

Top

RNA editing positional annotations for COG7 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1101931chr16_23388658_-ncRNA_exonic
CAediting_1101932chr16_23388660_-ncRNA_exonic
CAediting_1101933chr16_23388695_-ncRNA_exonic
CAediting_1101934chr16_23388697_-ncRNA_exonic
CAediting_1101935chr16_23388706_-ncRNA_exonic
CAediting_1101936chr16_23388709_-ncRNA_exonic
CAediting_1101937chr16_23388729_-ncRNA_exonic
CAediting_1101938chr16_23388750_-ncRNA_exonic
CAediting_1101939chr16_23388756_-ncRNA_exonic
CAediting_1101940chr16_23388767_-ncRNA_exonic
CAediting_1101941chr16_23388772_-ncRNA_exonic
CAediting_1101942chr16_23388773_-ncRNA_exonic
CAediting_1101943chr16_23390216_-ncRNA_exonic
CAediting_1101944chr16_23390324_-ncRNA_intronic
CAediting_1101945chr16_23390340_-ncRNA_intronic
CAediting_1101946chr16_23394878_-ncRNA_intronic
CAediting_1101947chr16_23394902_-ncRNA_exonic
CAediting_1101948chr16_23394903_-ncRNA_exonic
CAediting_1101949chr16_23394934_-ncRNA_exonic
CAediting_1101950chr16_23394943_-ncRNA_exonic
CAediting_1101951chr16_23394944_-ncRNA_exonic
CAediting_1101952chr16_23395081_-intronic
CAediting_1101953chr16_23395082_-intronic
CAediting_1101954chr16_23395090_-intronic
CAediting_1101955chr16_23396462_-intronic
CAediting_1101956chr16_23396539_-intronic
CAediting_1101957chr16_23396544_-intronic
CAediting_1101958chr16_23396555_-intronic
CAediting_1101959chr16_23396557_-intronic
CAediting_1101960chr16_23396567_-intronic
CAediting_1101961chr16_23396603_-intronic
CAediting_1101962chr16_23396616_-intronic
CAediting_1101963chr16_23396617_-intronic
CAediting_1101964chr16_23397108_-intronic
CAediting_1101965chr16_23397182_-intronic
CAediting_1101966chr16_23397184_-intronic
CAediting_1101967chr16_23405569_-ncRNA_intronic
CAediting_1101968chr16_23417519_-intronic
CAediting_1101969chr16_23417564_-intronic
CAediting_1101970chr16_23417575_-intronic
CAediting_1101971chr16_23417637_-intronic
CAediting_1101972chr16_23417640_-intronic
CAediting_1101973chr16_23417647_-intronic
CAediting_1101974chr16_23417695_-intronic
CAediting_1101975chr16_23417701_-intronic
CAediting_1101976chr16_23417711_-intronic
CAediting_1101977chr16_23417714_-intronic
CAediting_1101978chr16_23417732_-intronic
CAediting_1101979chr16_23417791_-intronic
CAediting_1101980chr16_23418248_-intronic
CAediting_1101981chr16_23418252_-intronic
CAediting_1101982chr16_23418257_-intronic
CAediting_1101983chr16_23418284_-intronic
CAediting_1101984chr16_23418287_-intronic
CAediting_1101985chr16_23418302_-intronic
CAediting_1101986chr16_23418313_-intronic
CAediting_1101987chr16_23418396_-intronic
CAediting_1101988chr16_23418436_-intronic
CAediting_1101989chr16_23419162_-intronic
CAediting_1101990chr16_23419283_-intronic
CAediting_1101991chr16_23419351_-intronic
CAediting_1101992chr16_23419359_-intronic
CAediting_1101993chr16_23419532_-intronic
CAediting_1101994chr16_23419625_-intronic
CAediting_1101995chr16_23419705_-intronic
CAediting_1101996chr16_23419934_-intronic
CAediting_1101997chr16_23419975_-intronic
CAediting_1101998chr16_23419993_-intronic
CAediting_1101999chr16_23420007_-intronic
CAediting_1102000chr16_23420020_-intronic
CAediting_1102001chr16_23420034_-intronic
CAediting_1102002chr16_23420059_-intronic
CAediting_1102003chr16_23420741_-intronic
CAediting_1102004chr16_23420742_-intronic
CAediting_1102005chr16_23420744_-intronic
CAediting_1102006chr16_23420747_-intronic
CAediting_1102007chr16_23420750_-intronic
CAediting_1102008chr16_23420782_-intronic
CAediting_1102009chr16_23420801_-intronic
CAediting_1102010chr16_23420804_-intronic
CAediting_1102011chr16_23420823_-intronic
CAediting_1102012chr16_23420827_-intronic
CAediting_1102013chr16_23420828_-intronic
CAediting_1102014chr16_23420841_-intronic
CAediting_1102015chr16_23420849_-intronic
CAediting_1102016chr16_23420851_-intronic
CAediting_1102017chr16_23420865_-intronic
CAediting_1102018chr16_23420868_-intronic
CAediting_1102019chr16_23420872_-intronic
CAediting_1102020chr16_23420876_-intronic
CAediting_1102021chr16_23420888_-intronic
CAediting_1102022chr16_23420890_-intronic
CAediting_1102023chr16_23420892_-intronic
CAediting_1102024chr16_23420895_-intronic
CAediting_1102025chr16_23420898_-intronic
CAediting_1102026chr16_23420904_-intronic
CAediting_1102027chr16_23420908_-intronic
CAediting_1102028chr16_23420911_-intronic
CAediting_1102029chr16_23420912_-intronic
CAediting_1102030chr16_23420913_-intronic
CAediting_1102031chr16_23420915_-intronic
CAediting_1102032chr16_23420916_-intronic
CAediting_1102033chr16_23420917_-intronic
CAediting_1102034chr16_23420918_-intronic
CAediting_1102035chr16_23420919_-intronic
CAediting_1102036chr16_23420920_-intronic
CAediting_1102037chr16_23420922_-intronic
CAediting_1102038chr16_23420923_-intronic
CAediting_1102039chr16_23420924_-intronic
CAediting_1102040chr16_23420925_-intronic
CAediting_1102041chr16_23420926_-intronic
CAediting_1102042chr16_23420927_-intronic
CAediting_1102043chr16_23420928_-intronic
CAediting_1102044chr16_23420929_-intronic
CAediting_1102045chr16_23420930_-intronic
CAediting_1102046chr16_23420931_-intronic
CAediting_1102047chr16_23420936_-intronic
CAediting_1102048chr16_23420942_-intronic
CAediting_1102049chr16_23420953_-intronic
CAediting_1102050chr16_23420955_-intronic
CAediting_1102051chr16_23420969_-intronic
CAediting_1102052chr16_23420977_-intronic
CAediting_1102053chr16_23420982_-intronic
CAediting_1102054chr16_23420995_-intronic
CAediting_1102055chr16_23421000_-intronic
CAediting_1102056chr16_23421001_-intronic
CAediting_1102057chr16_23421014_-intronic
CAediting_1102058chr16_23421017_-intronic
CAediting_1102059chr16_23421022_-intronic
CAediting_1102060chr16_23421023_-intronic
CAediting_1102061chr16_23421029_-intronic
CAediting_1102062chr16_23421041_-intronic
CAediting_1102063chr16_23421045_-intronic
CAediting_1102064chr16_23422106_-intronic
CAediting_1102065chr16_23422107_-intronic
CAediting_1102066chr16_23422182_-intronic
CAediting_1102067chr16_23422190_-intronic
CAediting_1102068chr16_23422200_-intronic
CAediting_1102069chr16_23422229_-intronic
CAediting_1102070chr16_23422768_-intronic
CAediting_1102071chr16_23422777_-intronic
CAediting_1102072chr16_23422786_-intronic
CAediting_1102073chr16_23422791_-intronic
CAediting_1102074chr16_23422795_-intronic
CAediting_1102075chr16_23422798_-intronic
CAediting_1102076chr16_23422799_-intronic
CAediting_1102077chr16_23422838_-intronic
CAediting_1102078chr16_23422839_-intronic
CAediting_1102079chr16_23422840_-intronic
CAediting_1102080chr16_23422877_-intronic
CAediting_1102081chr16_23422880_-intronic
CAediting_1102082chr16_23422897_-intronic
CAediting_1102083chr16_23422917_-intronic
CAediting_1102084chr16_23422921_-intronic
CAediting_1102085chr16_23422923_-intronic
CAediting_1102086chr16_23422933_-intronic
CAediting_1102087chr16_23422936_-intronic
CAediting_1102088chr16_23422962_-intronic
CAediting_1102089chr16_23422988_-intronic
CAediting_1102090chr16_23423019_-intronic
CAediting_1102091chr16_23423109_-intronic
CAediting_1102092chr16_23423131_-intronic
CAediting_1102093chr16_23423149_-intronic
CAediting_1102094chr16_23423200_-intronic
CAediting_1102095chr16_23423203_-intronic
CAediting_1102096chr16_23423224_-intronic
CAediting_1102097chr16_23423232_-intronic
CAediting_1102098chr16_23423243_-intronic
CAediting_1102099chr16_23423245_-intronic
CAediting_1102100chr16_23423248_-intronic
CAediting_1102101chr16_23423255_-intronic
CAediting_1102102chr16_23423258_-intronic
CAediting_1102103chr16_23423285_-intronic
CAediting_1102104chr16_23423304_-intronic
CAediting_1102105chr16_23423341_-intronic
CAediting_1102106chr16_23423351_-intronic
CAediting_1102107chr16_23424189_-intronic
CAediting_1102108chr16_23426129_-intronic
CAediting_1102109chr16_23428872_-intronic
CAediting_1102110chr16_23428875_-intronic
CAediting_1102111chr16_23429170_-intronic
CAediting_1102112chr16_23429285_-intronic
CAediting_1102113chr16_23430236_-intronic
CAediting_1102114chr16_23430346_-intronic
CAediting_1102115chr16_23430393_-intronic
CAediting_1102116chr16_23432116_-intronic
CAediting_1102117chr16_23433183_-intronic
CAediting_1102118chr16_23435255_-intronic
CAediting_1102119chr16_23438450_-intronic
CAediting_1102120chr16_23440566_-intronic
CAediting_1102121chr16_23440569_-intronic
CAediting_1102122chr16_23444587_-intronic
CAediting_1102123chr16_23444596_-intronic
CAediting_1102124chr16_23444601_-intronic
CAediting_1102125chr16_23444632_-intronic
CAediting_1102126chr16_23444642_-intronic
CAediting_1102127chr16_23444650_-intronic
CAediting_1102128chr16_23446524_-ncRNA_exonic
CAediting_1102129chr16_23446548_-ncRNA_exonic
CAediting_1102130chr16_23446549_-ncRNA_exonic
CAediting_1102131chr16_23446554_-ncRNA_exonic
CAediting_1102132chr16_23446576_-ncRNA_exonic
CAediting_1102133chr16_23446588_-ncRNA_exonic
CAediting_1102134chr16_23446589_-ncRNA_exonic
CAediting_1102135chr16_23446592_-ncRNA_exonic
CAediting_1102136chr16_23446615_-ncRNA_exonic
CAediting_1102137chr16_23446625_-ncRNA_exonic
CAediting_1102138chr16_23446627_-ncRNA_exonic
CAediting_1102139chr16_23446725_-ncRNA_exonic
CAediting_1102140chr16_23446789_-ncRNA_exonic
CAediting_1102141chr16_23446849_-ncRNA_exonic
CAediting_1102142chr16_23446854_-ncRNA_exonic
CAediting_1102143chr16_23447000_-ncRNA_exonic
CAediting_1102144chr16_23447029_-ncRNA_exonic
CAediting_1102145chr16_23447297_-intronic
CAediting_1102146chr16_23447304_-intronic
CAediting_1102147chr16_23447309_-intronic
CAediting_1102148chr16_23447314_-intronic
CAediting_1102149chr16_23447375_-intronic
CAediting_1102150chr16_23447379_-intronic
CAediting_1102151chr16_23447380_-intronic
CAediting_1102152chr16_23447381_-intronic
CAediting_1102153chr16_23448381_-intronic
CAediting_1102154chr16_23448392_-intronic
CAediting_1102155chr16_23448437_-intronic
CAediting_1102156chr16_23448493_-intronic
CAediting_1102157chr16_23448494_-intronic
CAediting_1102158chr16_23448497_-intronic
CAediting_1102159chr16_23448504_-intronic
CAediting_1102160chr16_23448561_-intronic
CAediting_1102161chr16_23448567_-intronic
CAediting_1102162chr16_23450931_-intronic
CAediting_1102163chr16_23451457_-intronic
CAediting_1102164chr16_23451496_-intronic
CAediting_1102165chr16_23451596_-intronic
CAediting_1102166chr16_23451598_-intronic
CAediting_1102167chr16_23451608_-intronic
CAediting_1102168chr16_23451612_-intronic
CAediting_1102169chr16_23451634_-intronic
CAediting_1102170chr16_23452387_-intronic
CAediting_1102171chr16_23452457_-intronic
CAediting_1102172chr16_23452505_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1101931chr16_23388658_-SINEAluAluSz6
CAediting_1101932chr16_23388660_-SINEAluAluSz6
CAediting_1101933chr16_23388695_-SINEAluAluSg
CAediting_1101934chr16_23388697_-SINEAluAluSg
CAediting_1101935chr16_23388706_-SINEAluAluSg
CAediting_1101936chr16_23388709_-SINEAluAluSg
CAediting_1101937chr16_23388729_-SINEAluAluSg
CAediting_1101938chr16_23388750_-SINEAluAluSg
CAediting_1101939chr16_23388756_-SINEAluAluSg
CAediting_1101940chr16_23388767_-SINEAluAluSg
CAediting_1101941chr16_23388772_-SINEAluAluSg
CAediting_1101942chr16_23388773_-SINEAluAluSg
CAediting_1101943chr16_23390216_-SINEAluAluSq2
CAediting_1101944chr16_23390324_-SINEAluAluSq2
CAediting_1101945chr16_23390340_-SINEAluAluSq2
CAediting_1101946chr16_23394878_-SINEAluAluSq2
CAediting_1101947chr16_23394902_-SINEAluAluSq2
CAediting_1101948chr16_23394903_-SINEAluAluSq2
CAediting_1101949chr16_23394934_-SINEAluAluSq2
CAediting_1101950chr16_23394943_-SINEAluAluSq2
CAediting_1101951chr16_23394944_-SINEAluAluSq2
CAediting_1101952chr16_23395081_-SINEAluAluSq2
CAediting_1101953chr16_23395082_-SINEAluAluSq2
CAediting_1101954chr16_23395090_-SINEAluAluSq2
CAediting_1101955chr16_23396462_-SINEAluAluSx1
CAediting_1101956chr16_23396539_-SINEAluAluSx1
CAediting_1101957chr16_23396544_-SINEAluAluSx1
CAediting_1101958chr16_23396555_-SINEAluAluSx1
CAediting_1101959chr16_23396557_-SINEAluAluSx1
CAediting_1101960chr16_23396567_-SINEAluAluSx1
CAediting_1101961chr16_23396603_-SINEAluAluSx1
CAediting_1101962chr16_23396616_-SINEAluAluSx1
CAediting_1101963chr16_23396617_-SINEAluAluSx1
CAediting_1101964chr16_23397108_-SINEAluAluJo
CAediting_1101965chr16_23397182_-SINEAluAluJo
CAediting_1101966chr16_23397184_-SINEAluAluJo
CAediting_1101967chr16_23405569_-SINEAluAluSx
CAediting_1101968chr16_23417519_-SINEAluAluJb
CAediting_1101969chr16_23417564_-SINEAluAluJb
CAediting_1101970chr16_23417575_-SINEAluAluJb
CAediting_1101971chr16_23417637_-SINEAluAluJb
CAediting_1101972chr16_23417640_-SINEAluAluJb
CAediting_1101973chr16_23417647_-SINEAluAluJb
CAediting_1101974chr16_23417695_-SINEAluAluJb
CAediting_1101975chr16_23417701_-SINEAluAluJb
CAediting_1101976chr16_23417711_-SINEAluAluJb
CAediting_1101977chr16_23417714_-SINEAluAluJb
CAediting_1101978chr16_23417732_-SINEAluAluJb
CAediting_1101979chr16_23417791_-SINEAluAluJb
CAediting_1101980chr16_23418248_-SINEAluAluJo
CAediting_1101981chr16_23418252_-SINEAluAluJo
CAediting_1101982chr16_23418257_-SINEAluAluJo
CAediting_1101983chr16_23418284_-SINEAluAluJo
CAediting_1101984chr16_23418287_-SINEAluAluJo
CAediting_1101985chr16_23418302_-SINEAluAluJo
CAediting_1101986chr16_23418313_-SINEAluAluJo
CAediting_1101987chr16_23418396_-SINEAluAluJo
CAediting_1101988chr16_23418436_-SINEAluAluJo
CAediting_1101989chr16_23419162_-SINEAluAluSp
CAediting_1101990chr16_23419283_-SINEAluAluSp
CAediting_1101991chr16_23419351_-SINEAluAluSp
CAediting_1101992chr16_23419359_-SINEAluAluSp
CAediting_1101993chr16_23419532_-SINEAluAluSx1
CAediting_1101994chr16_23419625_-SINEAluAluSx1
CAediting_1101995chr16_23419705_-SINEAluAluSx1
CAediting_1101996chr16_23419934_-SINEAluAluSz
CAediting_1101997chr16_23419975_-SINEAluAluSz
CAediting_1101998chr16_23419993_-SINEAluAluSz
CAediting_1101999chr16_23420007_-SINEAluAluSz
CAediting_1102000chr16_23420020_-SINEAluAluSz
CAediting_1102001chr16_23420034_-SINEAluAluSz
CAediting_1102002chr16_23420059_-SINEAluAluSz
CAediting_1102003chr16_23420741_-SINEAluAluJb
CAediting_1102004chr16_23420742_-SINEAluAluJb
CAediting_1102005chr16_23420744_-SINEAluAluJb
CAediting_1102006chr16_23420747_-SINEAluAluJb
CAediting_1102007chr16_23420750_-SINEAluAluJb
CAediting_1102008chr16_23420782_-SINEAluAluJb
CAediting_1102009chr16_23420801_-SINEAluAluJb
CAediting_1102010chr16_23420804_-SINEAluAluJb
CAediting_1102011chr16_23420823_-SINEAluAluJb
CAediting_1102012chr16_23420827_-SINEAluAluJb
CAediting_1102013chr16_23420828_-SINEAluAluJb
CAediting_1102014chr16_23420841_-SINEAluAluJb
CAediting_1102015chr16_23420849_-SINEAluAluJb
CAediting_1102016chr16_23420851_-SINEAluAluJb
CAediting_1102017chr16_23420865_-SINEAluAluJb
CAediting_1102018chr16_23420868_-SINEAluAluJb
CAediting_1102019chr16_23420872_-SINEAluAluJb
CAediting_1102020chr16_23420876_-SINEAluAluJb
CAediting_1102021chr16_23420888_-SINEAluAluJb
CAediting_1102022chr16_23420890_-SINEAluAluJb
CAediting_1102023chr16_23420892_-SINEAluAluJb
CAediting_1102024chr16_23420895_-SINEAluAluJb
CAediting_1102025chr16_23420898_-SINEAluAluJb
CAediting_1102026chr16_23420904_-SINEAluAluJb
CAediting_1102027chr16_23420908_-SINEAluAluJb
CAediting_1102028chr16_23420911_-SINEAluAluJb
CAediting_1102029chr16_23420912_-SINEAluAluJb
CAediting_1102030chr16_23420913_-SINEAluAluJb
CAediting_1102031chr16_23420915_-SINEAluAluJb
CAediting_1102032chr16_23420916_-SINEAluAluJb
CAediting_1102033chr16_23420917_-SINEAluAluJb
CAediting_1102034chr16_23420918_-SINEAluAluJb
CAediting_1102035chr16_23420919_-SINEAluAluJb
CAediting_1102036chr16_23420920_-SINEAluAluJb
CAediting_1102037chr16_23420922_-SINEAluAluJb
CAediting_1102038chr16_23420923_-SINEAluAluJb
CAediting_1102039chr16_23420924_-SINEAluAluJb
CAediting_1102040chr16_23420925_-SINEAluAluJb
CAediting_1102041chr16_23420926_-SINEAluAluJb
CAediting_1102042chr16_23420927_-SINEAluAluJb
CAediting_1102043chr16_23420928_-SINEAluAluJb
CAediting_1102044chr16_23420929_-SINEAluAluJb
CAediting_1102045chr16_23420930_-SINEAluAluJb
CAediting_1102046chr16_23420931_-SINEAluAluJb
CAediting_1102047chr16_23420936_-SINEAluAluJb
CAediting_1102048chr16_23420942_-SINEAluAluJb
CAediting_1102049chr16_23420953_-SINEAluAluJb
CAediting_1102050chr16_23420955_-SINEAluAluJb
CAediting_1102051chr16_23420969_-SINEAluAluJb
CAediting_1102052chr16_23420977_-SINEAluAluJb
CAediting_1102053chr16_23420982_-SINEAluAluJb
CAediting_1102054chr16_23420995_-SINEAluAluJb
CAediting_1102055chr16_23421000_-SINEAluAluJb
CAediting_1102056chr16_23421001_-SINEAluAluJb
CAediting_1102057chr16_23421014_-SINEAluAluJb
CAediting_1102058chr16_23421017_-SINEAluAluJb
CAediting_1102059chr16_23421022_-SINEAluAluJb
CAediting_1102060chr16_23421023_-SINEAluAluJb
CAediting_1102061chr16_23421029_-SINEAluAluJb
CAediting_1102062chr16_23421041_-SINEAluAluJb
CAediting_1102063chr16_23421045_-SINEAluAluJb
CAediting_1102064chr16_23422106_-SINEAluAluJo
CAediting_1102065chr16_23422107_-SINEAluAluJo
CAediting_1102066chr16_23422182_-SINEAluAluJo
CAediting_1102067chr16_23422190_-SINEAluAluJo
CAediting_1102068chr16_23422200_-SINEAluAluJo
CAediting_1102069chr16_23422229_-SINEAluAluJo
CAediting_1102070chr16_23422768_-SINEAluAluSz
CAediting_1102071chr16_23422777_-SINEAluAluSz
CAediting_1102072chr16_23422786_-SINEAluAluSz
CAediting_1102073chr16_23422791_-SINEAluAluSz
CAediting_1102074chr16_23422795_-SINEAluAluSz
CAediting_1102075chr16_23422798_-SINEAluAluSz
CAediting_1102076chr16_23422799_-SINEAluAluSz
CAediting_1102077chr16_23422838_-SINEAluAluSz
CAediting_1102078chr16_23422839_-SINEAluAluSz
CAediting_1102079chr16_23422840_-SINEAluAluSz
CAediting_1102080chr16_23422877_-SINEAluAluSz
CAediting_1102081chr16_23422880_-SINEAluAluSz
CAediting_1102082chr16_23422897_-SINEAluAluSz
CAediting_1102083chr16_23422917_-SINEAluAluSz
CAediting_1102084chr16_23422921_-SINEAluAluSz
CAediting_1102085chr16_23422923_-SINEAluAluSz
CAediting_1102086chr16_23422933_-SINEAluAluSz
CAediting_1102087chr16_23422936_-SINEAluAluSz
CAediting_1102088chr16_23422962_-SINEAluAluSz
CAediting_1102089chr16_23422988_-SINEAluAluSz
CAediting_1102090chr16_23423019_-SINEAluAluSz
CAediting_1102091chr16_23423109_-SINEAluAluSx
CAediting_1102092chr16_23423131_-SINEAluAluSx
CAediting_1102093chr16_23423149_-SINEAluAluSx
CAediting_1102094chr16_23423200_-SINEAluAluSx
CAediting_1102095chr16_23423203_-SINEAluAluSx
CAediting_1102096chr16_23423224_-SINEAluAluSx
CAediting_1102097chr16_23423232_-SINEAluAluSx
CAediting_1102098chr16_23423243_-SINEAluAluSx
CAediting_1102099chr16_23423245_-SINEAluAluSx
CAediting_1102100chr16_23423248_-SINEAluAluSx
CAediting_1102101chr16_23423255_-SINEAluAluSx
CAediting_1102102chr16_23423258_-SINEAluAluSx
CAediting_1102103chr16_23423285_-SINEAluAluSx
CAediting_1102104chr16_23423304_-SINEAluAluSx
CAediting_1102105chr16_23423341_-SINEAluAluSx
CAediting_1102106chr16_23423351_-SINEAluAluSx
CAediting_1102107chr16_23424189_-SINEAluAluSp
CAediting_1102108chr16_23426129_-SINEAluAluSz
CAediting_1102109chr16_23428872_-SINEAluAluSx1
CAediting_1102110chr16_23428875_-SINEAluAluSx1
CAediting_1102111chr16_23429170_-SINEAluAluJb
CAediting_1102112chr16_23429285_-SINEAluAluJb
CAediting_1102113chr16_23430236_-SINEAluAluJb
CAediting_1102114chr16_23430346_-SINEAluAluJb
CAediting_1102115chr16_23430393_-SINEAluAluJb
CAediting_1102116chr16_23432116_-SINEAluAluJr4
CAediting_1102117chr16_23433183_-SINEAluAluJb
CAediting_1102118chr16_23435255_-SINEAluAluSx
CAediting_1102119chr16_23438450_-SINEAluAluJr
CAediting_1102120chr16_23440566_-SINEAluAluJb
CAediting_1102121chr16_23440569_-SINEAluAluJb
CAediting_1102122chr16_23444587_-SINEAluAluJr
CAediting_1102123chr16_23444596_-SINEAluAluJr
CAediting_1102124chr16_23444601_-SINEAluAluJr
CAediting_1102125chr16_23444632_-SINEAluAluJr
CAediting_1102126chr16_23444642_-SINEAluAluJr
CAediting_1102127chr16_23444650_-SINEAluAluJr
CAediting_1102128chr16_23446524_-SINEAluAluSx1
CAediting_1102129chr16_23446548_-SINEAluAluSx1
CAediting_1102130chr16_23446549_-SINEAluAluSx1
CAediting_1102131chr16_23446554_-SINEAluAluSx1
CAediting_1102132chr16_23446576_-SINEAluAluSx1
CAediting_1102133chr16_23446588_-SINEAluAluSx1
CAediting_1102134chr16_23446589_-SINEAluAluSx1
CAediting_1102135chr16_23446592_-SINEAluAluSx1
CAediting_1102136chr16_23446615_-SINEAluAluSx1
CAediting_1102137chr16_23446625_-SINEAluAluSx1
CAediting_1102138chr16_23446627_-SINEAluAluSx1
CAediting_1102139chr16_23446725_-SINEAluAluSx1
CAediting_1102140chr16_23446789_-SINEAluAluJb
CAediting_1102141chr16_23446849_-SINEAluAluJb
CAediting_1102142chr16_23446854_-SINEAluAluJb
CAediting_1102143chr16_23447000_-SINEAluAluJb
CAediting_1102144chr16_23447029_-SINEAluAluJb
CAediting_1102145chr16_23447297_-SINEAluAluSz6
CAediting_1102146chr16_23447304_-SINEAluAluSz6
CAediting_1102147chr16_23447309_-SINEAluAluSz6
CAediting_1102148chr16_23447314_-SINEAluAluSz6
CAediting_1102149chr16_23447375_-SINEAluAluSz6
CAediting_1102150chr16_23447379_-SINEAluAluSz6
CAediting_1102151chr16_23447380_-SINEAluAluSz6
CAediting_1102152chr16_23447381_-SINEAluAluSz6
CAediting_1102153chr16_23448381_-SINEAluAluJr
CAediting_1102154chr16_23448392_-SINEAluAluJr
CAediting_1102155chr16_23448437_-SINEAluAluJr
CAediting_1102156chr16_23448493_-SINEAluAluJr
CAediting_1102157chr16_23448494_-SINEAluAluJr
CAediting_1102158chr16_23448497_-SINEAluAluJr
CAediting_1102159chr16_23448504_-SINEAluAluJr
CAediting_1102160chr16_23448561_-SINEAluAluJr
CAediting_1102161chr16_23448567_-SINEAluAluJr
CAediting_1102162chr16_23450931_-SINEAluAluSx
CAediting_1102163chr16_23451457_-SINEAluAluJr
CAediting_1102164chr16_23451496_-SINEAluAluJr
CAediting_1102165chr16_23451596_-SINEAluAluJr
CAediting_1102166chr16_23451598_-SINEAluAluJr
CAediting_1102167chr16_23451608_-SINEAluAluJr
CAediting_1102168chr16_23451612_-SINEAluAluJr
CAediting_1102169chr16_23451634_-SINEAluAluJr
CAediting_1102170chr16_23452387_-SINEAluAluJo
CAediting_1102171chr16_23452457_-SINEAluAluJo
CAediting_1102172chr16_23452505_-SINEAluAluJo

Top

RNA A-to-I editing events in the alternative splicing sites for COG7

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168434.11.COG7.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000168434.11.COG7.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for COG7

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
LUAD.CAediting_1102059.ENSG00000168434.COG7.png
Soverview

Top

Protein coding region RNA A-to-I editings for COG7

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for COG7

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1101931chr16_23388658_-ENSG00000168434.11ENST00000307149hsa-miR-3173-5p23388656233886627mer-m82338865523388675151.00-19.63
CAediting_1101931chr16_23388658_-ENSG00000168434.11ENST00000307149hsa-miR-370-3p23388658233886647mer-m82338865723388678140.00-15.09
CAediting_1101931chr16_23388658_-ENSG00000168434.11ENST00000307149hsa-miR-6726-3p23388654233886607mer-m82338865323388672146.00-21.08
CAediting_1101931chr16_23388658_-ENSG00000168434.11ENST00000307149hsa-miR-6799-3p23388656233886627mer-m82338865523388676144.00-18.55
CAediting_1101931chr16_23388658_-ENSG00000168434.11ENST00000307149hsa-miR-6893-3p23388658233886647mer-m82338865723388678140.00-17.80
CAediting_1101933chr16_23388695_-ENSG00000168434.11ENST00000307149hsa-miR-412-3p23388695233887017mer-m82338869423388716145.00-17.04
CAediting_1101933chr16_23388695_-ENSG00000168434.11ENST00000307149hsa-miR-6754-3p23388695233887017mer-m82338869423388718146.00-16.19
CAediting_1101934chr16_23388697_-ENSG00000168434.11ENST00000307149hsa-miR-23a-5p23388692233886987mer-m82338869123388713144.00-21.44
CAediting_1101934chr16_23388697_-ENSG00000168434.11ENST00000307149hsa-miR-23b-5p23388692233886987mer-m82338869123388711158.00-19.64
CAediting_1101936chr16_23388709_-ENSG00000168434.11ENST00000307149hsa-miR-443523388705233887128mer-1a2338870523388725146.00-18.85
CAediting_1101936chr16_23388709_-ENSG00000168434.11ENST00000307149hsa-miR-443523388705233887128mer-1a2338870523388725146.00-18.85
CAediting_1101936chr16_23388709_-ENSG00000168434.11ENST00000307149hsa-miR-4755-3p23388708233887147mer-m82338870723388728145.00-16.93
CAediting_1101938chr16_23388750_-ENSG00000168434.11ENST00000307149hsa-miR-317623388750233887567mer-m82338874423388761155.00-26.37
CAediting_1101938chr16_23388750_-ENSG00000168434.11ENST00000307149hsa-miR-317623388744233887518mer-1a2338874423388761155.00-26.37
CAediting_1101938chr16_23388750_-ENSG00000168434.11ENST00000307149hsa-miR-3922-3p23388750233887567mer-m82338874423388765150.00-19.26
CAediting_1101938chr16_23388750_-ENSG00000168434.11ENST00000307149hsa-miR-3922-3p23388744233887518mer-1a2338874423388765150.00-19.26
CAediting_1101940chr16_23388767_-ENSG00000168434.11ENST00000307149hsa-miR-371a-3p23388762233887687mer-m82338876123388783145.00-17.36
CAediting_1101941chr16_23388772_-ENSG00000168434.11ENST00000307149hsa-miR-805223388767233887737mer-1a2338876723388785140.00-24.15
CAediting_1101942chr16_23388773_-ENSG00000168434.11ENST00000307149hsa-miR-513a-5p23388772233887787mer-m82338877123388788144.00-16.68
CAediting_1101942chr16_23388773_-ENSG00000168434.11ENST00000307149hsa-miR-513a-5p23388772233887787mer-m82338877123388788144.00-16.68
CAediting_1101942chr16_23388773_-ENSG00000168434.11ENST00000307149hsa-miR-63823388767233887737mer-1a2338876723388791159.00-35.56

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1101941chr16_23388772_-ENSG00000168434.11ENST00000307149hsa-miR-10399-5p23388771233887777mer-m82338877023388791144-11.21
CAediting_1101942chr16_23388773_-ENSG00000168434.11ENST00000307149hsa-miR-10399-5p23388771233887777mer-m82338877023388791144-11.21
CAediting_1101939chr16_23388756_-ENSG00000168434.11ENST00000307149hsa-miR-150-5p23388755233887617mer-m82338875423388775140-15.8
CAediting_1101933chr16_23388695_-ENSG00000168434.11ENST00000307149hsa-miR-193b-5p23388690233886978mer-1a2338869023388711142-13.71
CAediting_1101933chr16_23388695_-ENSG00000168434.11ENST00000307149hsa-miR-317023388690233886967mer-m82338868923388710140-14.6
CAediting_1101935chr16_23388706_-ENSG00000168434.11ENST00000307149hsa-miR-4781-3p23388702233887087mer-m82338870123388724142-13.55
CAediting_1101940chr16_23388767_-ENSG00000168434.11ENST00000307149hsa-miR-5089-5p23388767233887737mer-m82338876623388788148-14.13
CAediting_1101941chr16_23388772_-ENSG00000168434.11ENST00000307149hsa-miR-5089-5p23388767233887737mer-m82338876623388788148-14.13
CAediting_1101940chr16_23388767_-ENSG00000168434.11ENST00000307149hsa-miR-512-3p23388762233887687mer-m82338876123388782149-15.51
CAediting_1101940chr16_23388767_-ENSG00000168434.11ENST00000307149hsa-miR-512-3p23388762233887687mer-m82338876123388782149-15.51
CAediting_1101931chr16_23388658_-ENSG00000168434.11ENST00000307149hsa-miR-607123388658233886647mer-m82338865723388675140-14.84
CAediting_1101932chr16_23388660_-ENSG00000168434.11ENST00000307149hsa-miR-607123388658233886647mer-m82338865723388675140-14.84
CAediting_1101941chr16_23388772_-ENSG00000168434.11ENST00000307149hsa-miR-6504-3p23388771233887777mer-m82338877023388791148-14.35
CAediting_1101942chr16_23388773_-ENSG00000168434.11ENST00000307149hsa-miR-6504-3p23388771233887777mer-m82338877023388791148-14.35
CAediting_1101940chr16_23388767_-ENSG00000168434.11ENST00000307149hsa-miR-6506-5p23388766233887727mer-m82338876523388787144-13.78
CAediting_1101931chr16_23388658_-ENSG00000168434.11ENST00000307149hsa-miR-6728-3p23388657233886637mer-m82338865623388676142-13.42
CAediting_1101932chr16_23388660_-ENSG00000168434.11ENST00000307149hsa-miR-6728-3p23388657233886637mer-m82338865623388676142-13.42
CAediting_1101939chr16_23388756_-ENSG00000168434.11ENST00000307149hsa-miR-6778-3p23388753233887597mer-m82338875223388772143-13.97
CAediting_1101933chr16_23388695_-ENSG00000168434.11ENST00000307149hsa-miR-6855-5p23388690233886967mer-m82338868923388713145-17.86
CAediting_1101939chr16_23388756_-ENSG00000168434.11ENST00000307149hsa-miR-6878-3p23388750233887578mer-1a2338875023388770142-14.14
CAediting_1101942chr16_23388773_-ENSG00000168434.11ENST00000307149hsa-miR-7151-3p23388772233887798mer-1a2338877223388792144-16.51

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000168434.11ENST00000561854hsa-miR-624-3p23391965233919706mer2339196423391986142-22.18
CAediting_980496chr14_31014685_-ENSG00000168434.11ENST00000563164hsa-miR-624-3p23391965233919706mer2339196423391986142-22.18
CAediting_228905chr2_188297554_+ENSG00000168434.11ENST00000307149hsa-miR-561-3p23388841233888477mer-m82338884023388861146-14.12
CAediting_228905chr2_188297554_+ENSG00000168434.11ENST00000561854hsa-miR-561-3p23388841233888477mer-m82338884023388861146-14.12

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000168434.11ENST00000563164hsa-miR-451223392221233922277mer-m82339222023392241140-19.08

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for COG7

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for COG7

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_1102060chr16_23421023_-0.01544592714979970.205813145844428....

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Relation with cancer stages for COG7

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCApathologic_stageCAediting_1102024chr16_23420895_-0.006730186447373480.293530110371133
ESCApathologic_stageCAediting_1102025chr16_23420898_-0.008487018682462730.294233073486136
ESCApathologic_stageCAediting_1102027chr16_23420908_-0.04820568954965340.27013812224712

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Relation with survival for COG7

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
STADCAediting_1102024chr16_23420895_-0.04084490964504470.02231966.50267

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RelatedDrugs for COG7

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for COG7

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
COG7C2931010Congenital disorder of glycosylation type 2E4CTD_human;GENOMICS_ENGLAND