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Editing gene: NXPE3 (CAeditome ID:91775)

Gene summary for NXPE3

Gene summary

Gene information	Gene symbol	NXPE3
	Gene ID	91775
	Gene name	neurexophilin and PC-esterase domain family member 3
	Synonyms	FAM55C\|MST115\|MSTP115
	Cytomap	3q12.3
	Type of gene	protein-coding
	Description	NXPE family member 3family with sequence similarity 55, member C
	Modification date	20210518
	UniProtAcc	Q969Y0
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for NXPE3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000144815.13

RNA A-to-I editing events in Cancer.

CAediting_298678(101782678, +), CAediting_298679(101782688, +), CAediting_298680(101782731, +), CAediting_298681(101782738, +), CAediting_298682(101782741, +), CAediting_298683(101782742, +), CAediting_298684(101782779, +), CAediting_298685(101787755, +), CAediting_298686(101789791, +), CAediting_298687(101802297, +), CAediting_298688(101802334, +), CAediting_298689(101802362, +), CAediting_298690(101802363, +), CAediting_298691(101802408, +), CAediting_298692(101802921, +), CAediting_298693(101802967, +), CAediting_298694(101803008, +), CAediting_298695(101803019, +), CAediting_298696(101803640, +), CAediting_298697(101803651, +), CAediting_298698(101803699, +), CAediting_298699(101803732, +), CAediting_298700(101803746, +), CAediting_298701(101803749, +), CAediting_298702(101803759, +), CAediting_298703(101803803, +), CAediting_298704(101803806, +), CAediting_298705(101803817, +), CAediting_298706(101803854, +), CAediting_298707(101803855, +), CAediting_298708(101803880, +), CAediting_298709(101803881, +), CAediting_298710(101803882, +), CAediting_298711(101803890, +), CAediting_298712(101803894, +), CAediting_298713(101803896, +), CAediting_298714(101805605, +), CAediting_298715(101805620, +), CAediting_298716(101805675, +), CAediting_298717(101805703, +), CAediting_298718(101805715, +), CAediting_298719(101805724, +), CAediting_298720(101807461, +), CAediting_298721(101812597, +), CAediting_298722(101812658, +), CAediting_298723(101812659, +), CAediting_298724(101812665, +), CAediting_298725(101823496, +), CAediting_298726(101823511, +), CAediting_298727(101823512, +), CAediting_298728(101823519, +), CAediting_298729(101823541, +), CAediting_298730(101823545, +), CAediting_298731(101823559, +), CAediting_298732(101823564, +), CAediting_298733(101823567, +), CAediting_298734(101823578, +), CAediting_298735(101823592, +), CAediting_298736(101823595, +), CAediting_298737(101823609, +), CAediting_298738(101823611, +), CAediting_298739(101823612, +), CAediting_298740(101823613, +), CAediting_298741(101823614, +), CAediting_298742(101823619, +), CAediting_298743(101823630, +), CAediting_298744(101823650, +), CAediting_298745(101823654, +), CAediting_298746(101823657, +), CAediting_298747(101823667, +), CAediting_298748(101823671, +), CAediting_298749(101823685, +), CAediting_298750(101823690, +), CAediting_298751(101823693, +), CAediting_298752(101823710, +), CAediting_298753(101823728, +), CAediting_298754(101823752, +), CAediting_298755(101823761, +), CAediting_298756(101826074, +), CAediting_298757(101826109, +), CAediting_298758(101826119, +), CAediting_298759(101826762, +), CAediting_298760(101826778, +), CAediting_298761(101826779, +), CAediting_298762(101826784, +), CAediting_298763(101826824, +), CAediting_298764(101826833, +), CAediting_298765(101826869, +), CAediting_298766(101826875, +), CAediting_298767(101826878, +), CAediting_298768(101826880, +), CAediting_298769(101826881, +), CAediting_298770(101826882, +), CAediting_298771(101826883, +), CAediting_298772(101826884, +), CAediting_298773(101826886, +), CAediting_298774(101826890, +), CAediting_298775(101826902, +), CAediting_298776(101826904, +), CAediting_298777(101826913, +), CAediting_298778(101826918, +), CAediting_298779(101826922, +), CAediting_298780(101826935, +), CAediting_298781(101826942, +), CAediting_298782(101826945, +), CAediting_298783(101826953, +), CAediting_298784(101826954, +), CAediting_298785(101826961, +), CAediting_298786(101826974, +), CAediting_298787(101826988, +), CAediting_298788(101827013, +), CAediting_298789(101827018, +), CAediting_298790(101827023, +), CAediting_298791(101827024, +), CAediting_298792(101827038, +), CAediting_298793(101827045, +), CAediting_298794(101827051, +),

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RNA editing positional annotations for NXPE3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_298678	chr3_101782678_+	UTR5
CAediting_298679	chr3_101782688_+	UTR5
CAediting_298680	chr3_101782731_+	UTR5
CAediting_298681	chr3_101782738_+	UTR5
CAediting_298682	chr3_101782741_+	UTR5
CAediting_298683	chr3_101782742_+	UTR5
CAediting_298684	chr3_101782779_+	UTR5
CAediting_298685	chr3_101787755_+	intronic
CAediting_298686	chr3_101789791_+	intronic
CAediting_298687	chr3_101802297_+	intronic
CAediting_298688	chr3_101802334_+	intronic
CAediting_298689	chr3_101802362_+	intronic
CAediting_298690	chr3_101802363_+	intronic
CAediting_298691	chr3_101802408_+	intronic
CAediting_298692	chr3_101802921_+	intronic
CAediting_298693	chr3_101802967_+	intronic
CAediting_298694	chr3_101803008_+	intronic
CAediting_298695	chr3_101803019_+	intronic
CAediting_298696	chr3_101803640_+	intronic
CAediting_298697	chr3_101803651_+	intronic
CAediting_298698	chr3_101803699_+	intronic
CAediting_298699	chr3_101803732_+	intronic
CAediting_298700	chr3_101803746_+	intronic
CAediting_298701	chr3_101803749_+	intronic
CAediting_298702	chr3_101803759_+	intronic
CAediting_298703	chr3_101803803_+	intronic
CAediting_298704	chr3_101803806_+	intronic
CAediting_298705	chr3_101803817_+	intronic
CAediting_298706	chr3_101803854_+	intronic
CAediting_298707	chr3_101803855_+	intronic
CAediting_298708	chr3_101803880_+	intronic
CAediting_298709	chr3_101803881_+	intronic
CAediting_298710	chr3_101803882_+	intronic
CAediting_298711	chr3_101803890_+	intronic
CAediting_298712	chr3_101803894_+	intronic
CAediting_298713	chr3_101803896_+	intronic
CAediting_298714	chr3_101805605_+	intronic
CAediting_298715	chr3_101805620_+	intronic
CAediting_298716	chr3_101805675_+	intronic
CAediting_298717	chr3_101805703_+	intronic
CAediting_298718	chr3_101805715_+	intronic
CAediting_298719	chr3_101805724_+	intronic
CAediting_298720	chr3_101807461_+	intronic
CAediting_298721	chr3_101812597_+	intronic
CAediting_298722	chr3_101812658_+	intronic
CAediting_298723	chr3_101812659_+	intronic
CAediting_298724	chr3_101812665_+	intronic
CAediting_298725	chr3_101823496_+	UTR3
CAediting_298726	chr3_101823511_+	UTR3
CAediting_298727	chr3_101823512_+	UTR3
CAediting_298728	chr3_101823519_+	UTR3
CAediting_298729	chr3_101823541_+	UTR3
CAediting_298730	chr3_101823545_+	UTR3
CAediting_298731	chr3_101823559_+	UTR3
CAediting_298732	chr3_101823564_+	UTR3
CAediting_298733	chr3_101823567_+	UTR3
CAediting_298734	chr3_101823578_+	UTR3
CAediting_298735	chr3_101823592_+	UTR3
CAediting_298736	chr3_101823595_+	UTR3
CAediting_298737	chr3_101823609_+	UTR3
CAediting_298738	chr3_101823611_+	UTR3
CAediting_298739	chr3_101823612_+	UTR3
CAediting_298740	chr3_101823613_+	UTR3
CAediting_298741	chr3_101823614_+	UTR3
CAediting_298742	chr3_101823619_+	UTR3
CAediting_298743	chr3_101823630_+	UTR3
CAediting_298744	chr3_101823650_+	UTR3
CAediting_298745	chr3_101823654_+	UTR3
CAediting_298746	chr3_101823657_+	UTR3
CAediting_298747	chr3_101823667_+	UTR3
CAediting_298748	chr3_101823671_+	UTR3
CAediting_298749	chr3_101823685_+	UTR3
CAediting_298750	chr3_101823690_+	UTR3
CAediting_298751	chr3_101823693_+	UTR3
CAediting_298752	chr3_101823710_+	UTR3
CAediting_298753	chr3_101823728_+	UTR3
CAediting_298754	chr3_101823752_+	UTR3
CAediting_298755	chr3_101823761_+	UTR3
CAediting_298756	chr3_101826074_+	UTR3
CAediting_298757	chr3_101826109_+	UTR3
CAediting_298758	chr3_101826119_+	UTR3
CAediting_298759	chr3_101826762_+	UTR3
CAediting_298760	chr3_101826778_+	UTR3
CAediting_298761	chr3_101826779_+	UTR3
CAediting_298762	chr3_101826784_+	UTR3
CAediting_298763	chr3_101826824_+	UTR3
CAediting_298764	chr3_101826833_+	UTR3
CAediting_298765	chr3_101826869_+	UTR3
CAediting_298766	chr3_101826875_+	UTR3
CAediting_298767	chr3_101826878_+	UTR3
CAediting_298768	chr3_101826880_+	UTR3
CAediting_298769	chr3_101826881_+	UTR3
CAediting_298770	chr3_101826882_+	UTR3
CAediting_298771	chr3_101826883_+	UTR3
CAediting_298772	chr3_101826884_+	UTR3
CAediting_298773	chr3_101826886_+	UTR3
CAediting_298774	chr3_101826890_+	UTR3
CAediting_298775	chr3_101826902_+	UTR3
CAediting_298776	chr3_101826904_+	UTR3
CAediting_298777	chr3_101826913_+	UTR3
CAediting_298778	chr3_101826918_+	UTR3
CAediting_298779	chr3_101826922_+	UTR3
CAediting_298780	chr3_101826935_+	UTR3
CAediting_298781	chr3_101826942_+	UTR3
CAediting_298782	chr3_101826945_+	UTR3
CAediting_298783	chr3_101826953_+	UTR3
CAediting_298784	chr3_101826954_+	UTR3
CAediting_298785	chr3_101826961_+	UTR3
CAediting_298786	chr3_101826974_+	UTR3
CAediting_298787	chr3_101826988_+	UTR3
CAediting_298788	chr3_101827013_+	UTR3
CAediting_298789	chr3_101827018_+	UTR3
CAediting_298790	chr3_101827023_+	UTR3
CAediting_298791	chr3_101827024_+	UTR3
CAediting_298792	chr3_101827038_+	UTR3
CAediting_298793	chr3_101827045_+	UTR3
CAediting_298794	chr3_101827051_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_298678	chr3_101782678_+	SINE	Alu	AluJb
CAediting_298679	chr3_101782688_+	SINE	Alu	AluJb
CAediting_298680	chr3_101782731_+	SINE	Alu	AluJb
CAediting_298681	chr3_101782738_+	SINE	Alu	AluJb
CAediting_298682	chr3_101782741_+	SINE	Alu	AluJb
CAediting_298683	chr3_101782742_+	SINE	Alu	AluJb
CAediting_298684	chr3_101782779_+	SINE	Alu	AluJb
CAediting_298685	chr3_101787755_+	LINE	L1	L1MB3
CAediting_298686	chr3_101789791_+	SINE	Alu	AluJr
CAediting_298689	chr3_101802362_+	SINE	Alu	FAM
CAediting_298690	chr3_101802363_+	SINE	Alu	FAM
CAediting_298691	chr3_101802408_+	SINE	Alu	FAM
CAediting_298692	chr3_101802921_+	SINE	Alu	AluJr
CAediting_298693	chr3_101802967_+	SINE	Alu	AluJr
CAediting_298694	chr3_101803008_+	SINE	Alu	AluJr
CAediting_298695	chr3_101803019_+	SINE	Alu	AluJr
CAediting_298696	chr3_101803640_+	SINE	Alu	AluJb
CAediting_298697	chr3_101803651_+	SINE	Alu	AluJb
CAediting_298698	chr3_101803699_+	SINE	Alu	AluJb
CAediting_298699	chr3_101803732_+	SINE	Alu	AluJb
CAediting_298700	chr3_101803746_+	SINE	Alu	AluJb
CAediting_298701	chr3_101803749_+	SINE	Alu	AluJb
CAediting_298702	chr3_101803759_+	SINE	Alu	AluJb
CAediting_298703	chr3_101803803_+	SINE	Alu	AluJb
CAediting_298704	chr3_101803806_+	SINE	Alu	AluJb
CAediting_298705	chr3_101803817_+	SINE	Alu	AluJb
CAediting_298706	chr3_101803854_+	SINE	Alu	AluJb
CAediting_298707	chr3_101803855_+	SINE	Alu	AluJb
CAediting_298708	chr3_101803880_+	SINE	Alu	AluJb
CAediting_298709	chr3_101803881_+	SINE	Alu	AluJb
CAediting_298710	chr3_101803882_+	SINE	Alu	AluJb
CAediting_298711	chr3_101803890_+	SINE	Alu	AluJb
CAediting_298712	chr3_101803894_+	SINE	Alu	AluJb
CAediting_298713	chr3_101803896_+	SINE	Alu	AluJb
CAediting_298714	chr3_101805605_+	SINE	Alu	AluSz6
CAediting_298715	chr3_101805620_+	SINE	Alu	AluSz6
CAediting_298716	chr3_101805675_+	SINE	Alu	AluSz6
CAediting_298717	chr3_101805703_+	SINE	Alu	AluSz6
CAediting_298718	chr3_101805715_+	SINE	Alu	AluSz6
CAediting_298719	chr3_101805724_+	SINE	Alu	AluSz6
CAediting_298720	chr3_101807461_+	SINE	Alu	AluJo
CAediting_298721	chr3_101812597_+	SINE	Alu	AluY
CAediting_298722	chr3_101812658_+	SINE	Alu	AluY
CAediting_298723	chr3_101812659_+	SINE	Alu	AluY
CAediting_298724	chr3_101812665_+	SINE	Alu	AluY
CAediting_298725	chr3_101823496_+	SINE	Alu	AluJr
CAediting_298726	chr3_101823511_+	SINE	Alu	AluJr
CAediting_298727	chr3_101823512_+	SINE	Alu	AluJr
CAediting_298728	chr3_101823519_+	SINE	Alu	AluJr
CAediting_298729	chr3_101823541_+	SINE	Alu	AluJr
CAediting_298730	chr3_101823545_+	SINE	Alu	AluJr
CAediting_298731	chr3_101823559_+	SINE	Alu	AluJr
CAediting_298732	chr3_101823564_+	SINE	Alu	AluJr
CAediting_298733	chr3_101823567_+	SINE	Alu	AluJr
CAediting_298734	chr3_101823578_+	SINE	Alu	AluJr
CAediting_298735	chr3_101823592_+	SINE	Alu	AluJr
CAediting_298736	chr3_101823595_+	SINE	Alu	AluJr
CAediting_298737	chr3_101823609_+	SINE	Alu	AluJr
CAediting_298738	chr3_101823611_+	SINE	Alu	AluJr
CAediting_298739	chr3_101823612_+	SINE	Alu	AluJr
CAediting_298740	chr3_101823613_+	SINE	Alu	AluJr
CAediting_298741	chr3_101823614_+	SINE	Alu	AluJr
CAediting_298742	chr3_101823619_+	SINE	Alu	AluJr
CAediting_298743	chr3_101823630_+	SINE	Alu	AluJr
CAediting_298744	chr3_101823650_+	SINE	Alu	AluJr
CAediting_298745	chr3_101823654_+	SINE	Alu	AluJr
CAediting_298746	chr3_101823657_+	SINE	Alu	AluJr
CAediting_298747	chr3_101823667_+	SINE	Alu	AluJr
CAediting_298748	chr3_101823671_+	SINE	Alu	AluJr
CAediting_298749	chr3_101823685_+	SINE	Alu	AluJr
CAediting_298750	chr3_101823690_+	SINE	Alu	AluJr
CAediting_298751	chr3_101823693_+	SINE	Alu	AluJr
CAediting_298752	chr3_101823710_+	SINE	Alu	AluJr
CAediting_298753	chr3_101823728_+	SINE	Alu	AluJr
CAediting_298754	chr3_101823752_+	SINE	Alu	AluJr
CAediting_298755	chr3_101823761_+	SINE	Alu	AluJr
CAediting_298759	chr3_101826762_+	SINE	Alu	AluSq2
CAediting_298760	chr3_101826778_+	SINE	Alu	AluSq2
CAediting_298761	chr3_101826779_+	SINE	Alu	AluSq2
CAediting_298762	chr3_101826784_+	SINE	Alu	AluSq2
CAediting_298763	chr3_101826824_+	SINE	Alu	AluSq2
CAediting_298764	chr3_101826833_+	SINE	Alu	AluSq2
CAediting_298765	chr3_101826869_+	SINE	Alu	AluSq2
CAediting_298766	chr3_101826875_+	SINE	Alu	AluSq2
CAediting_298767	chr3_101826878_+	SINE	Alu	AluSq2
CAediting_298768	chr3_101826880_+	SINE	Alu	AluSq2
CAediting_298769	chr3_101826881_+	SINE	Alu	AluSq2
CAediting_298770	chr3_101826882_+	SINE	Alu	AluSq2
CAediting_298771	chr3_101826883_+	SINE	Alu	AluSq2
CAediting_298772	chr3_101826884_+	SINE	Alu	AluSq2
CAediting_298773	chr3_101826886_+	SINE	Alu	AluSq2
CAediting_298774	chr3_101826890_+	SINE	Alu	AluSq2
CAediting_298775	chr3_101826902_+	SINE	Alu	AluSq2
CAediting_298776	chr3_101826904_+	SINE	Alu	AluSq2
CAediting_298777	chr3_101826913_+	SINE	Alu	AluSq2
CAediting_298778	chr3_101826918_+	SINE	Alu	AluSq2
CAediting_298779	chr3_101826922_+	SINE	Alu	AluSq2
CAediting_298780	chr3_101826935_+	SINE	Alu	AluSq2
CAediting_298781	chr3_101826942_+	SINE	Alu	AluSq2
CAediting_298782	chr3_101826945_+	SINE	Alu	AluSq2
CAediting_298783	chr3_101826953_+	SINE	Alu	AluSq2
CAediting_298784	chr3_101826954_+	SINE	Alu	AluSq2
CAediting_298785	chr3_101826961_+	SINE	Alu	AluSq2
CAediting_298786	chr3_101826974_+	SINE	Alu	AluSq2
CAediting_298787	chr3_101826988_+	SINE	Alu	AluSq2
CAediting_298788	chr3_101827013_+	SINE	Alu	AluSq2
CAediting_298789	chr3_101827018_+	SINE	Alu	AluSq2
CAediting_298790	chr3_101827023_+	SINE	Alu	AluSq2
CAediting_298791	chr3_101827024_+	SINE	Alu	AluSq2
CAediting_298792	chr3_101827038_+	Simple_repeat	Simple_repeat	(AATA)n
CAediting_298793	chr3_101827045_+	Simple_repeat	Simple_repeat	(AATA)n
CAediting_298794	chr3_101827051_+	Simple_repeat	Simple_repeat	(AATA)n

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RNA A-to-I editing events in the alternative splicing sites for NXPE3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_298696	chr3_101803640_+	101803624:101803646	3SS	0+4i	TGTTTGTTTGTTTTGCAACAGGG	-11.68	TGTTTGTTTGTTTTGCGACAGGG	-11.57

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000144815.13.NXPE3.

Correlation between RNA A-to-I editing and PSI for ENSG00000144815.13.NXPE3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NXPE3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for NXPE3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NXPE3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_298727	chr3_101823512_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4650-5p	101823510	101823516	7mer-m8	101823500	101823517	147.00	-20.53
CAediting_298727	chr3_101823512_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4650-5p	101823510	101823516	7mer-m8	101823500	101823517	147.00	-20.53
CAediting_298735	chr3_101823592_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4716-5p	101823586	101823592	7mer-m8	101823572	101823593	148.00	-14.09
CAediting_298737	chr3_101823609_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3678-3p	101823604	101823611	8mer-1a	101823590	101823611	142.00	-13.56
CAediting_298737	chr3_101823609_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4756-3p	101823602	101823608	7mer-m8	101823589	101823609	158.00	-17.42
CAediting_298737	chr3_101823609_+	ENSG00000144815.13	ENST00000491511	hsa-miR-557	101823607	101823613	7mer-1a	101823590	101823613	140.00	-19.16
CAediting_298747	chr3_101823667_+	ENSG00000144815.13	ENST00000491511	hsa-miR-18a-3p	101823665	101823671	7mer-m8	101823652	101823672	159.00	-26.28
CAediting_298747	chr3_101823667_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3157-3p	101823664	101823670	7mer-m8	101823649	101823671	163.00	-31.59
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3136-3p	101823681	101823687	7mer-m8	101823667	101823688	150.00	-16.87
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6724-5p	101823683	101823689	7mer-m8	101823668	101823690	141.00	-25.33
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6724-5p	101823683	101823689	7mer-m8	101823668	101823690	141.00	-25.33
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6724-5p	101823683	101823689	7mer-m8	101823668	101823690	141.00	-25.33
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6724-5p	101823683	101823689	7mer-m8	101823668	101823690	141.00	-25.33
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6773-5p	101823683	101823689	7mer-m8	101823670	101823690	152.00	-22.41
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-7155-3p	101823681	101823687	7mer-m8	101823670	101823688	143.00	-17.43
CAediting_298753	chr3_101823728_+	ENSG00000144815.13	ENST00000491511	hsa-miR-143-5p	101823724	101823730	7mer-m8	101823709	101823731	159.00	-21.26
CAediting_298753	chr3_101823728_+	ENSG00000144815.13	ENST00000491511	hsa-miR-194-3p	101823722	101823727	6mer	101823718	101823739	140.00	-19.57
CAediting_298753	chr3_101823728_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5693	101823721	101823727	7mer-m8	101823707	101823728	150.00	-21.09
CAediting_298767	chr3_101826878_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3680-3p	101826875	101826882	8mer-1a	101826860	101826882	140.00	-14.24
CAediting_298767	chr3_101826878_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3680-3p	101826875	101826882	8mer-1a	101826860	101826882	140.00	-14.24
CAediting_298769	chr3_101826881_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4742-3p	101826874	101826881	8mer-1a	101826859	101826881	142.00	-9.18
CAediting_298771	chr3_101826883_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6844	101826877	101826883	7mer-m8	101826863	101826884	155.00	-7.49
CAediting_298777	chr3_101826913_+	ENSG00000144815.13	ENST00000491511	hsa-miR-92b-5p	101826911	101826917	7mer-1a	101826895	101826917	145.00	-24.28
CAediting_298779	chr3_101826922_+	ENSG00000144815.13	ENST00000491511	hsa-miR-1207-3p	101826915	101826921	7mer-m8	101826905	101826922	140.00	-12.56
CAediting_298779	chr3_101826922_+	ENSG00000144815.13	ENST00000491511	hsa-miR-646	101826917	101826923	7mer-m8	101826906	101826924	145.00	-14.99
CAediting_298784	chr3_101826954_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4437	101826950	101826956	7mer-m8	101826937	101826957	146.00	-19.53
CAediting_298790	chr3_101827023_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5007-5p	101827021	101827027	7mer-m8	101827007	101827028	148.00	-16.86
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4258	101823491	101823497	7mer-m8	101823481	101823498	146.00	-22.02
CAediting_298728	chr3_101823519_+	ENSG00000144815.13	ENST00000491511	hsa-miR-513a-5p	101823513	101823519	7mer-m8	101823500	101823520	147.00	-19.64
CAediting_298728	chr3_101823519_+	ENSG00000144815.13	ENST00000491511	hsa-miR-513a-5p	101823513	101823519	7mer-m8	101823500	101823520	147.00	-19.64
CAediting_298728	chr3_101823519_+	ENSG00000144815.13	ENST00000491511	hsa-miR-638	101823518	101823524	7mer-1a	101823498	101823524	150.00	-32.36
CAediting_298730	chr3_101823545_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4485-5p	101823539	101823545	7mer-m8	101823531	101823546	147.00	-19.44
CAediting_298731	chr3_101823559_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5699-5p	101823555	101823561	7mer-m8	101823540	101823562	146.00	-14.42
CAediting_298731	chr3_101823559_+	ENSG00000144815.13	ENST00000491511	hsa-miR-874-5p	101823556	101823563	8mer-1a	101823541	101823563	152.00	-20.02
CAediting_298733	chr3_101823567_+	ENSG00000144815.13	ENST00000491511	hsa-miR-331-3p	101823561	101823567	7mer-m8	101823548	101823568	146.00	-22.34
CAediting_298733	chr3_101823567_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6771-3p	101823564	101823570	7mer-m8	101823551	101823571	159.00	-25.85
CAediting_298740	chr3_101823613_+	ENSG00000144815.13	ENST00000491511	hsa-miR-578	101823608	101823615	8mer-1a	101823595	101823615	141.00	-10.90
CAediting_298741	chr3_101823614_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6844	101823608	101823615	8mer-1a	101823595	101823615	140.00	-8.12
CAediting_298742	chr3_101823619_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4482-3p	101823614	101823621	8mer-1a	101823601	101823621	157.00	-14.87
CAediting_298745	chr3_101823654_+	ENSG00000144815.13	ENST00000491511	hsa-miR-1207-3p	101823647	101823653	7mer-m8	101823637	101823654	144.00	-12.83
CAediting_298745	chr3_101823654_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4524a-5p	101823650	101823656	7mer-m8	101823637	101823657	157.00	-18.38
CAediting_298745	chr3_101823654_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4524b-5p	101823650	101823656	7mer-m8	101823638	101823657	157.00	-16.04
CAediting_298745	chr3_101823654_+	ENSG00000144815.13	ENST00000491511	hsa-miR-646	101823649	101823656	8mer-1a	101823638	101823656	151.00	-18.10
CAediting_298746	chr3_101823657_+	ENSG00000144815.13	ENST00000491511	hsa-miR-2355-5p	101823654	101823660	7mer-m8	101823642	101823661	149.00	-19.41
CAediting_298751	chr3_101823693_+	ENSG00000144815.13	ENST00000491511	hsa-miR-497-3p	101823690	101823696	7mer-m8	101823678	101823697	141.00	-17.48
CAediting_298751	chr3_101823693_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6715a-3p	101823691	101823698	8mer-1a	101823679	101823698	145.00	-12.72
CAediting_298752	chr3_101823710_+	ENSG00000144815.13	ENST00000491511	hsa-miR-324-3p	101823703	101823709	7mer-m8	101823687	101823710	152.00	-31.85
CAediting_298754	chr3_101823752_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3120-5p	101823745	101823751	7mer-m8	101823731	101823752	153.00	-23.41
CAediting_298754	chr3_101823752_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4421	101823746	101823753	8mer-1a	101823732	101823753	152.00	-20.23
CAediting_298754	chr3_101823752_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5699-3p	101823746	101823753	8mer-1a	101823729	101823753	154.00	-27.06
CAediting_298755	chr3_101823761_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4524a-3p	101823759	101823764	6mer	101823741	101823765	142.00	-17.70
CAediting_298757	chr3_101826109_+	ENSG00000144815.13	ENST00000491511	hsa-miR-616-3p	101826105	101826110	6mer	101826089	101826111	142.00	-16.04
CAediting_298759	chr3_101826762_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6872-3p	101826756	101826762	7mer-m8	101826741	101826763	145.00	-20.31
CAediting_298760	chr3_101826778_+	ENSG00000144815.13	ENST00000491511	hsa-miR-513a-5p	101826772	101826778	7mer-m8	101826762	101826779	152.00	-17.32
CAediting_298760	chr3_101826778_+	ENSG00000144815.13	ENST00000491511	hsa-miR-513a-5p	101826772	101826778	7mer-m8	101826762	101826779	152.00	-17.32
CAediting_298760	chr3_101826778_+	ENSG00000144815.13	ENST00000491511	hsa-miR-638	101826777	101826783	7mer-1a	101826759	101826783	153.00	-31.53
CAediting_298761	chr3_101826779_+	ENSG00000144815.13	ENST00000491511	hsa-miR-8052	101826777	101826783	7mer-1a	101826765	101826783	148.00	-29.06
CAediting_298762	chr3_101826784_+	ENSG00000144815.13	ENST00000491511	hsa-miR-371a-3p	101826782	101826788	7mer-m8	101826767	101826789	144.00	-15.05
CAediting_298764	chr3_101826833_+	ENSG00000144815.13	ENST00000491511	hsa-miR-12113	101826826	101826832	7mer-m8	101826813	101826833	151.00	-20.83
CAediting_298764	chr3_101826833_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4539	101826826	101826832	7mer-m8	101826809	101826833	151.00	-18.42
CAediting_298765	chr3_101826869_+	ENSG00000144815.13	ENST00000491511	hsa-miR-374b-3p	101826866	101826873	8mer-1a	101826848	101826873	154.00	-14.99
CAediting_298765	chr3_101826869_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4756-3p	101826862	101826868	7mer-m8	101826850	101826869	153.00	-15.16
CAediting_298770	chr3_101826882_+	ENSG00000144815.13	ENST00000491511	hsa-miR-26a-1-3p	101826880	101826886	7mer-m8	101826865	101826887	155.00	-11.39
CAediting_298770	chr3_101826882_+	ENSG00000144815.13	ENST00000491511	hsa-miR-26a-2-3p	101826880	101826886	7mer-m8	101826865	101826887	162.00	-11.52
CAediting_298770	chr3_101826882_+	ENSG00000144815.13	ENST00000491511	hsa-miR-578	101826877	101826883	7mer-m8	101826864	101826884	148.00	-9.14
CAediting_298770	chr3_101826882_+	ENSG00000144815.13	ENST00000491511	hsa-miR-643	101826875	101826882	8mer-1a	101826860	101826882	147.00	-12.10
CAediting_298773	chr3_101826886_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3187-3p	101826883	101826889	7mer-m8	101826871	101826890	140.00	-13.42
CAediting_298773	chr3_101826886_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3190-5p	101826884	101826890	7mer-m8	101826872	101826891	143.00	-14.82
CAediting_298773	chr3_101826886_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4701-5p	101826884	101826889	6mer	101826882	101826904	143.00	-29.17
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-941	101826886	101826892	7mer-m8	101826871	101826893	153.00	-25.69
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-941	101826886	101826892	7mer-m8	101826871	101826893	153.00	-25.69
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-941	101826886	101826892	7mer-m8	101826871	101826893	153.00	-25.69
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-941	101826886	101826892	7mer-m8	101826871	101826893	153.00	-25.69
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-941	101826886	101826892	7mer-m8	101826871	101826893	153.00	-25.69
CAediting_298775	chr3_101826902_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4787-3p	101826898	101826904	7mer-m8	101826880	101826905	160.00	-26.37
CAediting_298776	chr3_101826904_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3622a-5p	101826902	101826908	7mer-m8	101826886	101826909	147.00	-24.28
CAediting_298776	chr3_101826904_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6767-3p	101826899	101826905	7mer-m8	101826885	101826906	147.00	-18.60
CAediting_298780	chr3_101826935_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6849-3p	101826928	101826934	7mer-m8	101826913	101826935	141.00	-14.90
CAediting_298781	chr3_101826942_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3679-3p	101826938	101826944	7mer-m8	101826924	101826945	151.00	-22.45
CAediting_298782	chr3_101826945_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4431	101826941	101826947	7mer-m8	101826926	101826948	144.00	-17.94
CAediting_298782	chr3_101826945_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6845-3p	101826939	101826944	6mer	101826925	101826945	147.00	-24.88
CAediting_298785	chr3_101826961_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5587-3p	101826954	101826960	7mer-m8	101826940	101826961	150.00	-24.92
CAediting_298785	chr3_101826961_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6840-5p	101826955	101826961	7mer-m8	101826937	101826962	147.00	-25.61
CAediting_298786	chr3_101826974_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6511b-3p	101826973	101826978	6mer	101826957	101826979	140.00	-25.01
CAediting_298786	chr3_101826974_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6511b-3p	101826973	101826978	6mer	101826957	101826979	140.00	-25.01
CAediting_298786	chr3_101826974_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6784-3p	101826973	101826978	6mer	101826957	101826979	143.00	-26.64
CAediting_298787	chr3_101826988_+	ENSG00000144815.13	ENST00000491511	hsa-miR-564	101826986	101826992	7mer-1a	101826974	101826992	143.00	-19.46
CAediting_298788	chr3_101827013_+	ENSG00000144815.13	ENST00000491511	hsa-miR-639	101827009	101827015	7mer-m8	101826992	101827016	153.00	-22.23
CAediting_298789	chr3_101827018_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4655-3p	101827012	101827018	7mer-m8	101827002	101827019	142.00	-27.02
CAediting_298789	chr3_101827018_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6865-3p	101827014	101827021	8mer-1a	101827001	101827021	160.00	-19.96
CAediting_298791	chr3_101827024_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6837-3p	101827017	101827023	7mer-m8	101827004	101827024	144.00	-16.75
CAediting_298793	chr3_101827045_+	ENSG00000144815.13	ENST00000491511	hsa-miR-12123	101827042	101827049	8mer-1a	101827028	101827049	147.00	-7.44
CAediting_298793	chr3_101827045_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5696	101827039	101827046	8mer-1a	101827025	101827046	152.00	-6.49
CAediting_298793	chr3_101827045_+	ENSG00000144815.13	ENST00000491511	hsa-miR-664a-3p	101827041	101827048	8mer-1a	101827026	101827048	155.00	-10.16

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_298728	chr3_101823519_+	ENSG00000144815.13	ENST00000491511	hsa-miR-10399-5p	101823514	101823520	7mer-m8	101823501	101823521	143	-9.53
CAediting_298760	chr3_101826778_+	ENSG00000144815.13	ENST00000491511	hsa-miR-10399-5p	101826773	101826779	7mer-m8	101826759	101826780	144	-10.26
CAediting_298761	chr3_101826779_+	ENSG00000144815.13	ENST00000491511	hsa-miR-10399-5p	101826773	101826779	7mer-m8	101826759	101826780	144	-10.26
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-10400-3p	101823683	101823689	7mer-m8	101823669	101823690	140	-20.37
CAediting_298750	chr3_101823690_+	ENSG00000144815.13	ENST00000491511	hsa-miR-10400-3p	101823683	101823689	7mer-m8	101823669	101823690	140	-20.37
CAediting_298775	chr3_101826902_+	ENSG00000144815.13	ENST00000491511	hsa-miR-1227-3p	101826896	101826903	8mer-1a	101826884	101826903	145	-17.23
CAediting_298743	chr3_101823630_+	ENSG00000144815.13	ENST00000491511	hsa-miR-1261	101823623	101823629	7mer-m8	101823612	101823630	147	-8.88
CAediting_298785	chr3_101826961_+	ENSG00000144815.13	ENST00000491511	hsa-miR-1306-5p	101826958	101826964	7mer-m8	101826942	101826965	153	-25.16
CAediting_298730	chr3_101823545_+	ENSG00000144815.13	ENST00000491511	hsa-miR-1976	101823542	101823548	7mer-m8	101823530	101823549	150	-25.93
CAediting_298736	chr3_101823595_+	ENSG00000144815.13	ENST00000491511	hsa-miR-200c-5p	101823592	101823598	7mer-m8	101823578	101823599	140	-13.19
CAediting_298773	chr3_101826886_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3064-5p	101826885	101826890	6mer	101826871	101826891	149	-19.88
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3064-5p	101826885	101826890	6mer	101826871	101826891	149	-19.88
CAediting_298729	chr3_101823541_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3176	101823535	101823541	7mer-m8	101823524	101823542	140	-15.24
CAediting_298732	chr3_101823564_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3176	101823558	101823564	7mer-m8	101823547	101823565	145	-17.46
CAediting_298745	chr3_101823654_+	ENSG00000144815.13	ENST00000491511	hsa-miR-325	101823651	101823657	7mer-m8	101823636	101823658	147	-17.09
CAediting_298746	chr3_101823657_+	ENSG00000144815.13	ENST00000491511	hsa-miR-325	101823651	101823657	7mer-m8	101823636	101823658	147	-17.09
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3620-3p	101823494	101823500	7mer-m8	101823479	101823501	147	-17.16
CAediting_298748	chr3_101823671_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3620-3p	101823669	101823676	8mer-1a	101823655	101823676	152	-26.23
CAediting_298734	chr3_101823578_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3663-5p	101823572	101823578	7mer-m8	101823560	101823579	144	-21.71
CAediting_298737	chr3_101823609_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3674	101823605	101823612	8mer-1a	101823591	101823612	140	-9.25
CAediting_298738	chr3_101823611_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3674	101823605	101823612	8mer-1a	101823591	101823612	140	-9.25
CAediting_298739	chr3_101823612_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3674	101823605	101823612	8mer-1a	101823591	101823612	140	-9.25
CAediting_298752	chr3_101823710_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3680-5p	101823705	101823711	7mer-m8	101823692	101823712	144	-14.9
CAediting_298752	chr3_101823710_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3680-5p	101823705	101823711	7mer-m8	101823692	101823712	144	-14.9
CAediting_298758	chr3_101826119_+	ENSG00000144815.13	ENST00000491511	hsa-miR-378j	101826113	101826119	7mer-m8	101826102	101826120	147	-14.62
CAediting_298729	chr3_101823541_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3922-3p	101823535	101823541	7mer-m8	101823521	101823542	141	-19.73
CAediting_298732	chr3_101823564_+	ENSG00000144815.13	ENST00000491511	hsa-miR-3922-3p	101823558	101823564	7mer-m8	101823545	101823565	150	-19.59
CAediting_298753	chr3_101823728_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4280	101823725	101823731	7mer-m8	101823714	101823732	147	-18.28
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4437	101823682	101823689	8mer-1a	101823669	101823689	141	-19.32
CAediting_298775	chr3_101826902_+	ENSG00000144815.13	ENST00000491511	hsa-miR-455-5p	101826898	101826904	7mer-m8	101826884	101826905	148	-21.55
CAediting_298776	chr3_101826904_+	ENSG00000144815.13	ENST00000491511	hsa-miR-455-5p	101826898	101826904	7mer-m8	101826884	101826905	148	-21.55
CAediting_298759	chr3_101826762_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4633-5p	101826756	101826761	6mer	101826743	101826762	143	-18.88
CAediting_298789	chr3_101827018_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4639-3p	101827014	101827021	8mer-1a	101827004	101827021	146	-17.61
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4659a-5p	101823489	101823495	7mer-m8	101823475	101823496	147	-16.3
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4659b-5p	101823489	101823495	7mer-m8	101823478	101823496	147	-13.96
CAediting_298749	chr3_101823685_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4674	101823683	101823689	7mer-m8	101823670	101823690	142	-23.98
CAediting_298750	chr3_101823690_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4674	101823683	101823689	7mer-m8	101823670	101823690	142	-23.98
CAediting_298775	chr3_101826902_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4715-3p	101826895	101826901	7mer-m8	101826880	101826902	155	-20.91
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4722-3p	101823491	101823497	7mer-m8	101823476	101823498	145	-16.85
CAediting_298758	chr3_101826119_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4738-3p	101826117	101826124	8mer-1a	101826103	101826124	150	-18.02
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4769-3p	101823490	101823496	7mer-m8	101823475	101823497	143	-15.65
CAediting_298786	chr3_101826974_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4772-3p	101826968	101826974	7mer-m8	101826953	101826975	154	-17.72
CAediting_298773	chr3_101826886_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4794	101826884	101826890	7mer-m8	101826870	101826891	147	-13.91
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4794	101826884	101826890	7mer-m8	101826870	101826891	147	-13.91
CAediting_298783	chr3_101826953_+	ENSG00000144815.13	ENST00000491511	hsa-miR-498-5p	101826947	101826953	7mer-m8	101826932	101826954	142	-10.2
CAediting_298784	chr3_101826954_+	ENSG00000144815.13	ENST00000491511	hsa-miR-498-5p	101826947	101826953	7mer-m8	101826932	101826954	142	-10.2
CAediting_298761	chr3_101826779_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5089-5p	101826777	101826783	7mer-m8	101826765	101826784	146	-13.24
CAediting_298762	chr3_101826784_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5089-5p	101826777	101826783	7mer-m8	101826765	101826784	146	-13.24
CAediting_298762	chr3_101826784_+	ENSG00000144815.13	ENST00000491511	hsa-miR-512-3p	101826782	101826788	7mer-m8	101826768	101826789	149	-15
CAediting_298762	chr3_101826784_+	ENSG00000144815.13	ENST00000491511	hsa-miR-512-3p	101826782	101826788	7mer-m8	101826768	101826789	149	-15
CAediting_298777	chr3_101826913_+	ENSG00000144815.13	ENST00000491511	hsa-miR-5187-5p	101826910	101826917	8mer-1a	101826895	101826917	146	-20.21
CAediting_298781	chr3_101826942_+	ENSG00000144815.13	ENST00000491511	hsa-miR-532-3p	101826936	101826943	8mer-1a	101826924	101826943	147	-19.61
CAediting_298736	chr3_101823595_+	ENSG00000144815.13	ENST00000491511	hsa-miR-550a-3p	101823592	101823598	7mer-m8	101823574	101823599	149	-21.44
CAediting_298736	chr3_101823595_+	ENSG00000144815.13	ENST00000491511	hsa-miR-550a-3p	101823592	101823598	7mer-m8	101823574	101823599	149	-21.44
CAediting_298736	chr3_101823595_+	ENSG00000144815.13	ENST00000491511	hsa-miR-550a-3p	101823592	101823598	7mer-m8	101823574	101823599	149	-21.44
CAediting_298751	chr3_101823693_+	ENSG00000144815.13	ENST00000491511	hsa-miR-606	101823689	101823695	7mer-m8	101823673	101823696	152	-15.91
CAediting_298734	chr3_101823578_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6131	101823573	101823579	7mer-m8	101823562	101823580	140	-16.72
CAediting_298743	chr3_101823630_+	ENSG00000144815.13	ENST00000491511	hsa-miR-619-3p	101823626	101823632	7mer-m8	101823610	101823633	154	-12.59
CAediting_298728	chr3_101823519_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6504-3p	101823514	101823520	7mer-m8	101823502	101823521	140	-7.96
CAediting_298762	chr3_101826784_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6506-5p	101826778	101826784	7mer-m8	101826763	101826785	144	-16.21
CAediting_298730	chr3_101823545_+	ENSG00000144815.13	ENST00000491511	hsa-miR-660-3p	101823543	101823550	8mer-1a	101823530	101823550	148	-18.09
CAediting_298773	chr3_101826886_+	ENSG00000144815.13	ENST00000491511	hsa-miR-664a-5p	101826884	101826890	7mer-m8	101826868	101826891	140	-13.72
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-664a-5p	101826884	101826890	7mer-m8	101826868	101826891	140	-13.72
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6727-3p	101823491	101823497	7mer-m8	101823477	101823498	141	-17.44
CAediting_298777	chr3_101826913_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6744-5p	101826909	101826915	7mer-m8	101826898	101826916	150	-20.26
CAediting_298730	chr3_101823545_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6747-3p	101823540	101823547	8mer-1a	101823527	101823547	150	-24.03
CAediting_298748	chr3_101823671_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6747-3p	101823666	101823672	7mer-m8	101823651	101823673	153	-23.72
CAediting_298752	chr3_101823710_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6750-3p	101823706	101823713	8mer-1a	101823693	101823713	141	-14.72
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6752-3p	101823492	101823498	7mer-m8	101823479	101823499	144	-18.99
CAediting_298748	chr3_101823671_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6752-3p	101823667	101823673	7mer-m8	101823655	101823674	149	-26.24
CAediting_298743	chr3_101823630_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6765-3p	101823627	101823633	7mer-m8	101823614	101823634	144	-18.02
CAediting_298774	chr3_101826890_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6765-3p	101826887	101826893	7mer-m8	101826874	101826894	151	-20.11
CAediting_298789	chr3_101827018_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6794-3p	101827015	101827022	8mer-1a	101827003	101827022	152	-17.61
CAediting_298725	chr3_101823496_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6817-5p	101823490	101823496	7mer-m8	101823476	101823497	151	-17.89
CAediting_298737	chr3_101823609_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6832-5p	101823603	101823610	8mer-1a	101823588	101823610	150	-14.06
CAediting_298765	chr3_101826869_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6832-5p	101826863	101826869	7mer-m8	101826848	101826870	142	-15.43
CAediting_298734	chr3_101823578_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6843-3p	101823571	101823577	7mer-m8	101823559	101823578	152	-20.01
CAediting_298734	chr3_101823578_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6848-3p	101823571	101823577	7mer-m8	101823561	101823578	142	-15.32
CAediting_298779	chr3_101826922_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6869-5p	101826919	101826925	7mer-m8	101826902	101826926	149	-21.01
CAediting_298729	chr3_101823541_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6878-3p	101823534	101823540	7mer-m8	101823521	101823541	142	-18.73
CAediting_298731	chr3_101823559_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6878-3p	101823557	101823563	7mer-m8	101823542	101823564	150	-27.54
CAediting_298732	chr3_101823564_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6878-3p	101823557	101823563	7mer-m8	101823542	101823564	150	-27.54
CAediting_298728	chr3_101823519_+	ENSG00000144815.13	ENST00000491511	hsa-miR-7151-3p	101823512	101823519	8mer-1a	101823499	101823519	152	-18.92
CAediting_298760	chr3_101826778_+	ENSG00000144815.13	ENST00000491511	hsa-miR-7151-3p	101826771	101826778	8mer-1a	101826762	101826778	146	-17.62

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000144815.13	ENST00000491511	hsa-miR-624-3p	101824090	101824096	7mer-m8	101824077	101824097	152	-15.48
CAediting_980496	chr14_31014685_-	ENSG00000144815.13	ENST00000491511	hsa-miR-624-3p	101826243	101826249	7mer-m8	101826230	101826250	144	-12.64
CAediting_393	chr1_1167164_+	ENSG00000144815.13	ENST00000491511	hsa-miR-200b-3p	101826344	101826351	8mer-1a	101826330	101826351	146	-11.1
CAediting_688080	chr9_63819626_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4477b	101824776	101824782	7mer-m8	101824762	101824783	151	-10.5
CAediting_1229414	chr17_67471546_+	ENSG00000144815.13	ENST00000491511	hsa-miR-548aa	101824656	101824663	8mer-1a	101824639	101824663	140	-11.54
CAediting_77128	chr1_85133844_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4423-3p	101824732	101824738	7mer-m8	101824719	101824739	140	-13.86
CAediting_228905	chr2_188297554_+	ENSG00000144815.13	ENST00000491511	hsa-miR-561-3p	101827021	101827027	7mer-m8	101827006	101827028	149	-15.9
CAediting_396018	chr5_1062918_-	ENSG00000144815.13	ENST00000491511	hsa-miR-4635	101824777	101824783	7mer-m8	101824764	101824784	140	-13.26
CAediting_573001	chr7_92204086_-	ENSG00000144815.13	ENST00000491511	hsa-miR-1285-5p	101824416	101824422	7mer-m8	101824399	101824423	145	-15.19
CAediting_573001	chr7_92204086_-	ENSG00000144815.13	ENST00000491511	hsa-miR-1285-5p	101826556	101826562	7mer-m8	101826543	101826563	151	-18.24
CAediting_86358	chr1_109598906_+	ENSG00000144815.13	ENST00000616286	hsa-miR-197-5p	101821500	101821507	8mer-1a	101821484	101821507	168	-31.43
CAediting_1524209	chrX_134546392_-	ENSG00000144815.13	ENST00000616286	hsa-miR-503-5p	101821489	101821496	8mer-1a	101821474	101821496	147	-25.29

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_846604	chr11_93733708_-	ENSG00000144815.13	ENST00000491511	hsa-miR-1304-3p	101825236	101825243	8mer-1a	101825221	101825243	142	-15.07
CAediting_846604	chr11_93733708_-	ENSG00000144815.13	ENST00000491511	hsa-miR-1304-3p	101822027	101822034	8mer-1a	101822013	101822034	151	-19.08
CAediting_86358	chr1_109598906_+	ENSG00000144815.13	ENST00000491511	hsa-miR-197-5p	101827338	101827344	7mer-m8	101827323	101827345	152	-19.94
CAediting_393	chr1_1167164_+	ENSG00000144815.13	ENST00000491511	hsa-miR-200b-3p	101824319	101824324	6mer	101824304	101824325	143	-14.62
CAediting_393	chr1_1167164_+	ENSG00000144815.13	ENST00000491511	hsa-miR-200b-3p	101826478	101826484	7mer-1a	101826463	101826484	144	-11.55
CAediting_396018	chr5_1062918_-	ENSG00000144815.13	ENST00000491511	hsa-miR-4635	101823325	101823331	7mer-m8	101823312	101823332	140	-11.62
CAediting_396018	chr5_1062918_-	ENSG00000144815.13	ENST00000491511	hsa-miR-4635	101826417	101826423	7mer-m8	101826405	101826424	148	-11.34
CAediting_414656	chr5_72878640_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4804-3p	101825104	101825110	7mer-m8	101825090	101825111	147	-12.21
CAediting_414656	chr5_72878640_+	ENSG00000144815.13	ENST00000491511	hsa-miR-4804-3p	101826441	101826448	8mer-1a	101826428	101826448	140	-10.5
CAediting_1229414	chr17_67471546_+	ENSG00000144815.13	ENST00000491511	hsa-miR-548aa	101823267	101823272	6mer	101823250	101823273	141	-15.78
CAediting_1229415	chr17_67471547_+	ENSG00000144815.13	ENST00000491511	hsa-miR-548aa	101823267	101823272	6mer	101823250	101823273	141	-15.78
CAediting_1229414	chr17_67471546_+	ENSG00000144815.13	ENST00000491511	hsa-miR-548aa	101824908	101824914	7mer-m8	101824891	101824915	142	-5.59
CAediting_1229415	chr17_67471547_+	ENSG00000144815.13	ENST00000491511	hsa-miR-548aa	101824908	101824914	7mer-m8	101824891	101824915	142	-5.59
CAediting_580943	chr7_100356700_+	ENSG00000144815.13	ENST00000491511	hsa-miR-6840-3p	101824531	101824537	7mer-m8	101824517	101824538	143	-25.5
CAediting_1399425	chr20_1392958_-	ENSG00000144815.13	ENST00000491511	hsa-miR-6869-5p	101826919	101826925	7mer-m8	101826902	101826926	149	-21.01

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NXPE3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000273347.8	protein_coding
ENST00000474165.4	protein_coding
ENST00000477909.4	protein_coding
ENST00000491511.5	protein_coding
ENST00000495842.4	protein_coding
ENST00000422132.1	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_298678	ENST00000273347.8	chr3_101782678_+	-1218.60	-1219.30	-1226.50
CAediting_298679	ENST00000273347.8	chr3_101782688_+	-1220.70	-1219.30	-1226.50
CAediting_298680	ENST00000273347.8	chr3_101782731_+	-1223.20	-1219.30	-1226.50
CAediting_298681	ENST00000273347.8	chr3_101782738_+	-1219.00	-1219.30	-1226.50
CAediting_298682	ENST00000273347.8	chr3_101782741_+	-1219.00	-1219.30	-1226.50
CAediting_298683	ENST00000273347.8	chr3_101782742_+	-1219.30	-1219.30	-1226.50
CAediting_298684	ENST00000273347.8	chr3_101782779_+	-1218.60	-1219.30	-1226.50
CAediting_298725	ENST00000273347.8	chr3_101823496_+	-1219.40	-1219.30	-1226.50
CAediting_298726	ENST00000273347.8	chr3_101823511_+	-1219.30	-1219.30	-1226.50
CAediting_298727	ENST00000273347.8	chr3_101823512_+	-1219.30	-1219.30	-1226.50
CAediting_298728	ENST00000273347.8	chr3_101823519_+	-1219.00	-1219.30	-1226.50
CAediting_298729	ENST00000273347.8	chr3_101823541_+	-1219.30	-1219.30	-1226.50
CAediting_298730	ENST00000273347.8	chr3_101823545_+	-1219.30	-1219.30	-1226.50
CAediting_298731	ENST00000273347.8	chr3_101823559_+	-1218.40	-1219.30	-1226.50
CAediting_298732	ENST00000273347.8	chr3_101823564_+	-1223.20	-1219.30	-1226.50
CAediting_298733	ENST00000273347.8	chr3_101823567_+	-1218.40	-1219.30	-1226.50
CAediting_298734	ENST00000273347.8	chr3_101823578_+	-1218.60	-1219.30	-1226.50
CAediting_298735	ENST00000273347.8	chr3_101823592_+	-1219.30	-1219.30	-1226.50
CAediting_298736	ENST00000273347.8	chr3_101823595_+	-1218.00	-1219.30	-1226.50
CAediting_298737	ENST00000273347.8	chr3_101823609_+	-1219.30	-1219.30	-1226.50
CAediting_298738	ENST00000273347.8	chr3_101823611_+	-1219.30	-1219.30	-1226.50
CAediting_298739	ENST00000273347.8	chr3_101823612_+	-1219.30	-1219.30	-1226.50
CAediting_298740	ENST00000273347.8	chr3_101823613_+	-1219.30	-1219.30	-1226.50
CAediting_298741	ENST00000273347.8	chr3_101823614_+	-1219.30	-1219.30	-1226.50
CAediting_298742	ENST00000273347.8	chr3_101823619_+	-1219.30	-1219.30	-1226.50
CAediting_298678	ENST00000474165.4	chr3_101782678_+	-319.90	-319.90	-329.60
CAediting_298679	ENST00000474165.4	chr3_101782688_+	-320.80	-319.90	-329.60
CAediting_298680	ENST00000474165.4	chr3_101782731_+	-319.20	-319.90	-329.60
CAediting_298681	ENST00000474165.4	chr3_101782738_+	-323.00	-319.90	-329.60
CAediting_298682	ENST00000474165.4	chr3_101782741_+	-321.10	-319.90	-329.60
CAediting_298683	ENST00000474165.4	chr3_101782742_+	-319.90	-319.90	-329.60
CAediting_298684	ENST00000474165.4	chr3_101782779_+	-318.80	-319.90	-329.60
CAediting_298678	ENST00000477909.4	chr3_101782678_+	-1012.90	-1012.50	-1024.10
CAediting_298679	ENST00000477909.4	chr3_101782688_+	-1012.80	-1012.50	-1024.10
CAediting_298680	ENST00000477909.4	chr3_101782731_+	-1013.80	-1012.50	-1024.10
CAediting_298681	ENST00000477909.4	chr3_101782738_+	-1013.90	-1012.50	-1024.10
CAediting_298682	ENST00000477909.4	chr3_101782741_+	-1011.80	-1012.50	-1024.10
CAediting_298683	ENST00000477909.4	chr3_101782742_+	-1013.70	-1012.50	-1024.10
CAediting_298684	ENST00000477909.4	chr3_101782779_+	-1016.00	-1012.50	-1024.10
CAediting_298678	ENST00000491511.5	chr3_101782678_+	-2731.00	-2731.70	-2792.10
CAediting_298679	ENST00000491511.5	chr3_101782688_+	-2738.40	-2731.70	-2792.10
CAediting_298680	ENST00000491511.5	chr3_101782731_+	-2737.90	-2731.70	-2792.10
CAediting_298681	ENST00000491511.5	chr3_101782738_+	-2731.40	-2731.70	-2792.10
CAediting_298682	ENST00000491511.5	chr3_101782741_+	-2737.70	-2731.70	-2792.10
CAediting_298683	ENST00000491511.5	chr3_101782742_+	-2731.90	-2731.70	-2792.10
CAediting_298684	ENST00000491511.5	chr3_101782779_+	-2732.90	-2731.70	-2792.10
CAediting_298725	ENST00000491511.5	chr3_101823496_+	-2731.60	-2731.70	-2792.10
CAediting_298726	ENST00000491511.5	chr3_101823511_+	-2732.20	-2731.70	-2792.10
CAediting_298727	ENST00000491511.5	chr3_101823512_+	-2732.60	-2731.70	-2792.10
CAediting_298728	ENST00000491511.5	chr3_101823519_+	-2731.70	-2731.70	-2792.10
CAediting_298729	ENST00000491511.5	chr3_101823541_+	-2731.00	-2731.70	-2792.10
CAediting_298730	ENST00000491511.5	chr3_101823545_+	-2732.60	-2731.70	-2792.10
CAediting_298731	ENST00000491511.5	chr3_101823559_+	-2730.80	-2731.70	-2792.10
CAediting_298732	ENST00000491511.5	chr3_101823564_+	-2731.00	-2731.70	-2792.10
CAediting_298733	ENST00000491511.5	chr3_101823567_+	-2730.80	-2731.70	-2792.10
CAediting_298734	ENST00000491511.5	chr3_101823578_+	-2731.00	-2731.70	-2792.10
CAediting_298735	ENST00000491511.5	chr3_101823592_+	-2738.30	-2731.70	-2792.10
CAediting_298736	ENST00000491511.5	chr3_101823595_+	-2730.80	-2731.70	-2792.10
CAediting_298737	ENST00000491511.5	chr3_101823609_+	-2731.70	-2731.70	-2792.10
CAediting_298738	ENST00000491511.5	chr3_101823611_+	-2733.10	-2731.70	-2792.10
CAediting_298739	ENST00000491511.5	chr3_101823612_+	-2731.80	-2731.70	-2792.10
CAediting_298740	ENST00000491511.5	chr3_101823613_+	-2731.80	-2731.70	-2792.10
CAediting_298741	ENST00000491511.5	chr3_101823614_+	-2731.80	-2731.70	-2792.10
CAediting_298742	ENST00000491511.5	chr3_101823619_+	-2731.70	-2731.70	-2792.10
CAediting_298743	ENST00000491511.5	chr3_101823630_+	-2731.00	-2731.70	-2792.10
CAediting_298744	ENST00000491511.5	chr3_101823650_+	-2735.90	-2731.70	-2792.10
CAediting_298745	ENST00000491511.5	chr3_101823654_+	-2731.40	-2731.70	-2792.10
CAediting_298746	ENST00000491511.5	chr3_101823657_+	-2732.30	-2731.70	-2792.10
CAediting_298747	ENST00000491511.5	chr3_101823667_+	-2736.00	-2731.70	-2792.10
CAediting_298748	ENST00000491511.5	chr3_101823671_+	-2735.10	-2731.70	-2792.10
CAediting_298749	ENST00000491511.5	chr3_101823685_+	-2731.90	-2731.70	-2792.10
CAediting_298750	ENST00000491511.5	chr3_101823690_+	-2731.50	-2731.70	-2792.10
CAediting_298751	ENST00000491511.5	chr3_101823693_+	-2731.60	-2731.70	-2792.10
CAediting_298752	ENST00000491511.5	chr3_101823710_+	-2731.50	-2731.70	-2792.10
CAediting_298753	ENST00000491511.5	chr3_101823728_+	-2735.10	-2731.70	-2792.10
CAediting_298754	ENST00000491511.5	chr3_101823752_+	-2731.70	-2731.70	-2792.10
CAediting_298755	ENST00000491511.5	chr3_101823761_+	-2734.30	-2731.70	-2792.10
CAediting_298756	ENST00000491511.5	chr3_101826074_+	-2731.70	-2731.70	-2792.10
CAediting_298757	ENST00000491511.5	chr3_101826109_+	-2731.80	-2731.70	-2792.10
CAediting_298758	ENST00000491511.5	chr3_101826119_+	-2731.00	-2731.70	-2792.10
CAediting_298759	ENST00000491511.5	chr3_101826762_+	-2730.40	-2731.70	-2792.10
CAediting_298760	ENST00000491511.5	chr3_101826778_+	-2731.80	-2731.70	-2792.10
CAediting_298761	ENST00000491511.5	chr3_101826779_+	-2731.70	-2731.70	-2792.10
CAediting_298762	ENST00000491511.5	chr3_101826784_+	-2731.00	-2731.70	-2792.10
CAediting_298763	ENST00000491511.5	chr3_101826824_+	-2731.90	-2731.70	-2792.10
CAediting_298764	ENST00000491511.5	chr3_101826833_+	-2735.30	-2731.70	-2792.10
CAediting_298765	ENST00000491511.5	chr3_101826869_+	-2733.00	-2731.70	-2792.10
CAediting_298766	ENST00000491511.5	chr3_101826875_+	-2733.40	-2731.70	-2792.10
CAediting_298767	ENST00000491511.5	chr3_101826878_+	-2731.70	-2731.70	-2792.10
CAediting_298768	ENST00000491511.5	chr3_101826880_+	-2732.50	-2731.70	-2792.10
CAediting_298769	ENST00000491511.5	chr3_101826881_+	-2731.80	-2731.70	-2792.10
CAediting_298770	ENST00000491511.5	chr3_101826882_+	-2732.90	-2731.70	-2792.10
CAediting_298771	ENST00000491511.5	chr3_101826883_+	-2734.50	-2731.70	-2792.10
CAediting_298772	ENST00000491511.5	chr3_101826884_+	-2734.60	-2731.70	-2792.10
CAediting_298773	ENST00000491511.5	chr3_101826886_+	-2733.50	-2731.70	-2792.10
CAediting_298774	ENST00000491511.5	chr3_101826890_+	-2731.80	-2731.70	-2792.10
CAediting_298775	ENST00000491511.5	chr3_101826902_+	-2731.70	-2731.70	-2792.10
CAediting_298776	ENST00000491511.5	chr3_101826904_+	-2731.70	-2731.70	-2792.10
CAediting_298777	ENST00000491511.5	chr3_101826913_+	-2734.90	-2731.70	-2792.10
CAediting_298778	ENST00000491511.5	chr3_101826918_+	-2731.00	-2731.70	-2792.10
CAediting_298779	ENST00000491511.5	chr3_101826922_+	-2731.70	-2731.70	-2792.10
CAediting_298780	ENST00000491511.5	chr3_101826935_+	-2730.80	-2731.70	-2792.10
CAediting_298781	ENST00000491511.5	chr3_101826942_+	-2730.80	-2731.70	-2792.10
CAediting_298782	ENST00000491511.5	chr3_101826945_+	-2731.70	-2731.70	-2792.10
CAediting_298783	ENST00000491511.5	chr3_101826953_+	-2730.80	-2731.70	-2792.10
CAediting_298784	ENST00000491511.5	chr3_101826954_+	-2738.40	-2731.70	-2792.10
CAediting_298785	ENST00000491511.5	chr3_101826961_+	-2730.80	-2731.70	-2792.10
CAediting_298786	ENST00000491511.5	chr3_101826974_+	-2731.00	-2731.70	-2792.10
CAediting_298787	ENST00000491511.5	chr3_101826988_+	-2731.30	-2731.70	-2792.10
CAediting_298788	ENST00000491511.5	chr3_101827013_+	-2731.70	-2731.70	-2792.10
CAediting_298789	ENST00000491511.5	chr3_101827018_+	-2731.30	-2731.70	-2792.10
CAediting_298790	ENST00000491511.5	chr3_101827023_+	-2734.30	-2731.70	-2792.10
CAediting_298791	ENST00000491511.5	chr3_101827024_+	-2731.40	-2731.70	-2792.10
CAediting_298792	ENST00000491511.5	chr3_101827038_+	-2732.40	-2731.70	-2792.10
CAediting_298793	ENST00000491511.5	chr3_101827045_+	-2731.70	-2731.70	-2792.10
CAediting_298794	ENST00000491511.5	chr3_101827051_+	-2731.70	-2731.70	-2792.10
CAediting_298678	ENST00000495842.4	chr3_101782678_+	-284.60	-284.60	-295.70
CAediting_298679	ENST00000495842.4	chr3_101782688_+	-285.50	-284.60	-295.70
CAediting_298680	ENST00000495842.4	chr3_101782731_+	-286.50	-284.60	-295.70
CAediting_298681	ENST00000495842.4	chr3_101782738_+	-289.50	-284.60	-295.70
CAediting_298682	ENST00000495842.4	chr3_101782741_+	-285.60	-284.60	-295.70
CAediting_298683	ENST00000495842.4	chr3_101782742_+	-284.90	-284.60	-295.70
CAediting_298684	ENST00000495842.4	chr3_101782779_+	-285.20	-284.60	-295.70
CAediting_298725	ENST00000422132.1	chr3_101823496_+	-2617.50	-2612.40	-2675.50
CAediting_298726	ENST00000422132.1	chr3_101823511_+	-2614.20	-2612.40	-2675.50
CAediting_298727	ENST00000422132.1	chr3_101823512_+	-2614.90	-2612.40	-2675.50
CAediting_298728	ENST00000422132.1	chr3_101823519_+	-2612.40	-2612.40	-2675.50
CAediting_298729	ENST00000422132.1	chr3_101823541_+	-2611.70	-2612.40	-2675.50
CAediting_298730	ENST00000422132.1	chr3_101823545_+	-2613.30	-2612.40	-2675.50
CAediting_298731	ENST00000422132.1	chr3_101823559_+	-2614.10	-2612.40	-2675.50
CAediting_298732	ENST00000422132.1	chr3_101823564_+	-2613.50	-2612.40	-2675.50
CAediting_298733	ENST00000422132.1	chr3_101823567_+	-2615.60	-2612.40	-2675.50
CAediting_298734	ENST00000422132.1	chr3_101823578_+	-2613.50	-2612.40	-2675.50
CAediting_298735	ENST00000422132.1	chr3_101823592_+	-2617.50	-2612.40	-2675.50
CAediting_298736	ENST00000422132.1	chr3_101823595_+	-2611.90	-2612.40	-2675.50
CAediting_298737	ENST00000422132.1	chr3_101823609_+	-2615.80	-2612.40	-2675.50
CAediting_298738	ENST00000422132.1	chr3_101823611_+	-2614.40	-2612.40	-2675.50
CAediting_298739	ENST00000422132.1	chr3_101823612_+	-2614.80	-2612.40	-2675.50
CAediting_298740	ENST00000422132.1	chr3_101823613_+	-2613.90	-2612.40	-2675.50
CAediting_298741	ENST00000422132.1	chr3_101823614_+	-2615.10	-2612.40	-2675.50
CAediting_298742	ENST00000422132.1	chr3_101823619_+	-2612.60	-2612.40	-2675.50
CAediting_298743	ENST00000422132.1	chr3_101823630_+	-2611.70	-2612.40	-2675.50
CAediting_298744	ENST00000422132.1	chr3_101823650_+	-2616.60	-2612.40	-2675.50
CAediting_298745	ENST00000422132.1	chr3_101823654_+	-2612.10	-2612.40	-2675.50
CAediting_298746	ENST00000422132.1	chr3_101823657_+	-2613.00	-2612.40	-2675.50
CAediting_298747	ENST00000422132.1	chr3_101823667_+	-2616.70	-2612.40	-2675.50
CAediting_298748	ENST00000422132.1	chr3_101823671_+	-2615.80	-2612.40	-2675.50
CAediting_298749	ENST00000422132.1	chr3_101823685_+	-2612.60	-2612.40	-2675.50
CAediting_298750	ENST00000422132.1	chr3_101823690_+	-2612.20	-2612.40	-2675.50
CAediting_298751	ENST00000422132.1	chr3_101823693_+	-2612.30	-2612.40	-2675.50
CAediting_298752	ENST00000422132.1	chr3_101823710_+	-2612.20	-2612.40	-2675.50
CAediting_298753	ENST00000422132.1	chr3_101823728_+	-2615.80	-2612.40	-2675.50
CAediting_298754	ENST00000422132.1	chr3_101823752_+	-2612.40	-2612.40	-2675.50
CAediting_298755	ENST00000422132.1	chr3_101823761_+	-2615.00	-2612.40	-2675.50
CAediting_298756	ENST00000422132.1	chr3_101826074_+	-2612.40	-2612.40	-2675.50
CAediting_298757	ENST00000422132.1	chr3_101826109_+	-2612.50	-2612.40	-2675.50
CAediting_298758	ENST00000422132.1	chr3_101826119_+	-2611.70	-2612.40	-2675.50
CAediting_298759	ENST00000422132.1	chr3_101826762_+	-2611.10	-2612.40	-2675.50
CAediting_298760	ENST00000422132.1	chr3_101826778_+	-2612.50	-2612.40	-2675.50
CAediting_298761	ENST00000422132.1	chr3_101826779_+	-2612.40	-2612.40	-2675.50
CAediting_298762	ENST00000422132.1	chr3_101826784_+	-2611.70	-2612.40	-2675.50
CAediting_298763	ENST00000422132.1	chr3_101826824_+	-2611.70	-2612.40	-2675.50
CAediting_298764	ENST00000422132.1	chr3_101826833_+	-2612.20	-2612.40	-2675.50
CAediting_298765	ENST00000422132.1	chr3_101826869_+	-2614.00	-2612.40	-2675.50
CAediting_298766	ENST00000422132.1	chr3_101826875_+	-2617.90	-2612.40	-2675.50
CAediting_298767	ENST00000422132.1	chr3_101826878_+	-2612.50	-2612.40	-2675.50
CAediting_298768	ENST00000422132.1	chr3_101826880_+	-2612.10	-2612.40	-2675.50
CAediting_298769	ENST00000422132.1	chr3_101826881_+	-2612.50	-2612.40	-2675.50
CAediting_298770	ENST00000422132.1	chr3_101826882_+	-2612.50	-2612.40	-2675.50
CAediting_298771	ENST00000422132.1	chr3_101826883_+	-2612.50	-2612.40	-2675.50
CAediting_298772	ENST00000422132.1	chr3_101826884_+	-2614.90	-2612.40	-2675.50
CAediting_298773	ENST00000422132.1	chr3_101826886_+	-2615.10	-2612.40	-2675.50
CAediting_298774	ENST00000422132.1	chr3_101826890_+	-2616.30	-2612.40	-2675.50
CAediting_298775	ENST00000422132.1	chr3_101826902_+	-2612.70	-2612.40	-2675.50
CAediting_298776	ENST00000422132.1	chr3_101826904_+	-2612.00	-2612.40	-2675.50
CAediting_298777	ENST00000422132.1	chr3_101826913_+	-2615.60	-2612.40	-2675.50
CAediting_298778	ENST00000422132.1	chr3_101826918_+	-2613.10	-2612.40	-2675.50
CAediting_298779	ENST00000422132.1	chr3_101826922_+	-2612.40	-2612.40	-2675.50
CAediting_298780	ENST00000422132.1	chr3_101826935_+	-2616.90	-2612.40	-2675.50
CAediting_298781	ENST00000422132.1	chr3_101826942_+	-2613.90	-2612.40	-2675.50
CAediting_298782	ENST00000422132.1	chr3_101826945_+	-2612.70	-2612.40	-2675.50
CAediting_298783	ENST00000422132.1	chr3_101826953_+	-2611.50	-2612.40	-2675.50
CAediting_298784	ENST00000422132.1	chr3_101826954_+	-2619.10	-2612.40	-2675.50
CAediting_298785	ENST00000422132.1	chr3_101826961_+	-2616.00	-2612.40	-2675.50
CAediting_298786	ENST00000422132.1	chr3_101826974_+	-2611.70	-2612.40	-2675.50
CAediting_298787	ENST00000422132.1	chr3_101826988_+	-2613.80	-2612.40	-2675.50
CAediting_298788	ENST00000422132.1	chr3_101827013_+	-2612.00	-2612.40	-2675.50
CAediting_298789	ENST00000422132.1	chr3_101827018_+	-2611.50	-2612.40	-2675.50
CAediting_298790	ENST00000422132.1	chr3_101827023_+	-2618.80	-2612.40	-2675.50
CAediting_298791	ENST00000422132.1	chr3_101827024_+	-2612.70	-2612.40	-2675.50
CAediting_298792	ENST00000422132.1	chr3_101827038_+	-2612.50	-2612.40	-2675.50
CAediting_298793	ENST00000422132.1	chr3_101827045_+	-2612.50	-2612.40	-2675.50
CAediting_298794	ENST00000422132.1	chr3_101827051_+	-2612.40	-2612.40	-2675.50

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Relation with ADAR for NXPE3

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_298710	chr3_101803882_+	0.0026020790626038	0.370224971460278	.	.	.	.
LGG	CAediting_298732	chr3_101823564_+	0.0356879277609148	0.259067313716978	.	.	.	.
BRCA	CAediting_298732	chr3_101823564_+	0.0213196876054892	0.159956041074909	.	.	.	.
LGG	CAediting_298735	chr3_101823592_+	0.0180950676102918	0.221067650956719	.	.	.	.
BRCA	CAediting_298735	chr3_101823592_+	0.00265007071905993	0.177096940397534	.	.	.	.
LUSC	CAediting_298735	chr3_101823592_+	0.00330531297074465	0.389318935825586	.	.	.	.
LGG	CAediting_298753	chr3_101823728_+	0.0484779757097737	0.219965076400538	.	.	.	.
BRCA	CAediting_298753	chr3_101823728_+	0.000352180309924141	0.232644016404597	.	.	.	.

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Relation with cancer stages for NXPE3

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_298732	chr3_101823564_+	0.000874077238888941	0.469361619108539
STAD	pathologic_stage	CAediting_298732	chr3_101823564_+	0.0281144357086646	-0.29353459170302

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Relation with survival for NXPE3

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_298726	chr3_101823511_+	0.0265018909478799	0.0130907	91531900000

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RelatedDrugs for NXPE3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NXPE3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene