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Editing gene: ATG12 (CAeditome ID:9140)

Gene summary for ATG12

Gene summary

Gene information	Gene symbol	ATG12
	Gene ID	9140
	Gene name	autophagy related 12
	Synonyms	APG12\|APG12L\|FBR93\|HAPG12
	Cytomap	5q22.3
	Type of gene	protein-coding
	Description	ubiquitin-like protein ATG12APG12 autophagy 12-likeATG12 autophagy related 12 homologApg12 (autophagy, yeast) homolog
	Modification date	20210518
	UniProtAcc	O94817
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ATG12	GO:0005776	Ubiquitin-like protein ATG12	24954904

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RNA A-to-I events for ATG12

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000145782.11

RNA A-to-I editing events in Cancer.

CAediting_423081(115829841, -), CAediting_423082(115829854, -), CAediting_423083(115829866, -), CAediting_423084(115829868, -), CAediting_423085(115829885, -), CAediting_423086(115829889, -), CAediting_423087(115829899, -), CAediting_423088(115829910, -), CAediting_423089(115829923, -), CAediting_423090(115829932, -), CAediting_423091(115829935, -), CAediting_423092(115829945, -), CAediting_423093(115830034, -), CAediting_423094(115830035, -), CAediting_423095(115830073, -), CAediting_423096(115830078, -), CAediting_423097(115830091, -), CAediting_423098(115830112, -), CAediting_423099(115830120, -), CAediting_423100(115830600, -), CAediting_423101(115830603, -), CAediting_423102(115830615, -), CAediting_423103(115830619, -), CAediting_423104(115830626, -), CAediting_423105(115830653, -), CAediting_423106(115830654, -), CAediting_423107(115830658, -), CAediting_423108(115830660, -), CAediting_423109(115830704, -), CAediting_423110(115830712, -), CAediting_423111(115830713, -), CAediting_423112(115830733, -), CAediting_423113(115830735, -), CAediting_423114(115830748, -), CAediting_423115(115830749, -), CAediting_423116(115830781, -), CAediting_423117(115830784, -), CAediting_423118(115830796, -), CAediting_423119(115830798, -), CAediting_423120(115837372, -), CAediting_423121(115837375, -), CAediting_423122(115837402, -), CAediting_423123(115838832, -), CAediting_423124(115838844, -), CAediting_423125(115838871, -), CAediting_423126(115838904, -), CAediting_423127(115838942, -), CAediting_423128(115838956, -), CAediting_423129(115838959, -), CAediting_423130(115838988, -), CAediting_423131(115838991, -), CAediting_423132(115839001, -), CAediting_423133(115839006, -), CAediting_423134(115839011, -), CAediting_423135(115839015, -), CAediting_423136(115839023, -), CAediting_423137(115839040, -), CAediting_423138(115839041, -), CAediting_423139(115839060, -), CAediting_423140(115839077, -), CAediting_423141(115839109, -), CAediting_423142(115840325, -), CAediting_423143(115840394, -), CAediting_423144(115840395, -), CAediting_423145(115840430, -), CAediting_423146(115840435, -), CAediting_423147(115840436, -), CAediting_423148(115840466, -), CAediting_423149(115840468, -), CAediting_423150(115840471, -), CAediting_423151(115840473, -), CAediting_423152(115840475, -), CAediting_423153(115840476, -), CAediting_423154(115840493, -), CAediting_423155(115840494, -), CAediting_423156(115840501, -), CAediting_423157(115840502, -), CAediting_423158(115840524, -), CAediting_423159(115840548, -), CAediting_423160(115840554, -), CAediting_423161(115840562, -), CAediting_423162(115840565, -), CAediting_423163(115840570, -), CAediting_423164(115840571, -),

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RNA editing positional annotations for ATG12 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_423081	chr5_115829841_-	UTR3
CAediting_423082	chr5_115829854_-	UTR3
CAediting_423083	chr5_115829866_-	UTR3
CAediting_423084	chr5_115829868_-	UTR3
CAediting_423085	chr5_115829885_-	UTR3
CAediting_423086	chr5_115829889_-	UTR3
CAediting_423087	chr5_115829899_-	UTR3
CAediting_423088	chr5_115829910_-	UTR3
CAediting_423089	chr5_115829923_-	UTR3
CAediting_423090	chr5_115829932_-	UTR3
CAediting_423091	chr5_115829935_-	UTR3
CAediting_423092	chr5_115829945_-	UTR3
CAediting_423093	chr5_115830034_-	UTR3
CAediting_423094	chr5_115830035_-	UTR3
CAediting_423095	chr5_115830073_-	UTR3
CAediting_423096	chr5_115830078_-	UTR3
CAediting_423097	chr5_115830091_-	UTR3
CAediting_423098	chr5_115830112_-	UTR3
CAediting_423099	chr5_115830120_-	UTR3
CAediting_423100	chr5_115830600_-	ncRNA_exonic
CAediting_423101	chr5_115830603_-	ncRNA_exonic
CAediting_423102	chr5_115830615_-	ncRNA_exonic
CAediting_423103	chr5_115830619_-	ncRNA_exonic
CAediting_423104	chr5_115830626_-	ncRNA_exonic
CAediting_423105	chr5_115830653_-	ncRNA_exonic
CAediting_423106	chr5_115830654_-	ncRNA_exonic
CAediting_423107	chr5_115830658_-	ncRNA_exonic
CAediting_423108	chr5_115830660_-	ncRNA_exonic
CAediting_423109	chr5_115830704_-	ncRNA_exonic
CAediting_423110	chr5_115830712_-	ncRNA_exonic
CAediting_423111	chr5_115830713_-	ncRNA_exonic
CAediting_423112	chr5_115830733_-	ncRNA_exonic
CAediting_423113	chr5_115830735_-	ncRNA_exonic
CAediting_423114	chr5_115830748_-	ncRNA_exonic
CAediting_423115	chr5_115830749_-	ncRNA_exonic
CAediting_423116	chr5_115830781_-	ncRNA_exonic
CAediting_423117	chr5_115830784_-	ncRNA_exonic
CAediting_423118	chr5_115830796_-	ncRNA_exonic
CAediting_423119	chr5_115830798_-	ncRNA_exonic
CAediting_423120	chr5_115837372_-	ncRNA_intronic
CAediting_423121	chr5_115837375_-	ncRNA_intronic
CAediting_423122	chr5_115837402_-	ncRNA_intronic
CAediting_423123	chr5_115838832_-	ncRNA_exonic
CAediting_423124	chr5_115838844_-	ncRNA_exonic
CAediting_423125	chr5_115838871_-	ncRNA_exonic
CAediting_423126	chr5_115838904_-	ncRNA_exonic
CAediting_423127	chr5_115838942_-	ncRNA_exonic
CAediting_423128	chr5_115838956_-	ncRNA_exonic
CAediting_423129	chr5_115838959_-	ncRNA_exonic
CAediting_423130	chr5_115838988_-	ncRNA_exonic
CAediting_423131	chr5_115838991_-	ncRNA_exonic
CAediting_423132	chr5_115839001_-	ncRNA_exonic
CAediting_423133	chr5_115839006_-	ncRNA_exonic
CAediting_423134	chr5_115839011_-	ncRNA_exonic
CAediting_423135	chr5_115839015_-	ncRNA_exonic
CAediting_423136	chr5_115839023_-	ncRNA_exonic
CAediting_423137	chr5_115839040_-	ncRNA_exonic
CAediting_423138	chr5_115839041_-	ncRNA_exonic
CAediting_423139	chr5_115839060_-	ncRNA_exonic
CAediting_423140	chr5_115839077_-	ncRNA_exonic
CAediting_423141	chr5_115839109_-	ncRNA_exonic
CAediting_423142	chr5_115840325_-	intronic
CAediting_423143	chr5_115840394_-	intronic
CAediting_423144	chr5_115840395_-	intronic
CAediting_423145	chr5_115840430_-	intronic
CAediting_423146	chr5_115840435_-	intronic
CAediting_423147	chr5_115840436_-	intronic
CAediting_423148	chr5_115840466_-	intronic
CAediting_423149	chr5_115840468_-	intronic
CAediting_423150	chr5_115840471_-	intronic
CAediting_423151	chr5_115840473_-	intronic
CAediting_423152	chr5_115840475_-	intronic
CAediting_423153	chr5_115840476_-	intronic
CAediting_423154	chr5_115840493_-	intronic
CAediting_423155	chr5_115840494_-	intronic
CAediting_423156	chr5_115840501_-	UTR3
CAediting_423157	chr5_115840502_-	UTR3
CAediting_423158	chr5_115840524_-	UTR3
CAediting_423159	chr5_115840548_-	exonic
CAediting_423160	chr5_115840554_-	exonic
CAediting_423161	chr5_115840562_-	exonic
CAediting_423162	chr5_115840565_-	exonic
CAediting_423163	chr5_115840570_-	exonic
CAediting_423164	chr5_115840571_-	exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_423081	chr5_115829841_-	SINE	Alu	AluSq2
CAediting_423082	chr5_115829854_-	SINE	Alu	AluSq2
CAediting_423083	chr5_115829866_-	SINE	Alu	AluSq2
CAediting_423084	chr5_115829868_-	SINE	Alu	AluSq2
CAediting_423085	chr5_115829885_-	SINE	Alu	AluSq2
CAediting_423086	chr5_115829889_-	SINE	Alu	AluSq2
CAediting_423087	chr5_115829899_-	SINE	Alu	AluSq2
CAediting_423088	chr5_115829910_-	SINE	Alu	AluSq2
CAediting_423089	chr5_115829923_-	SINE	Alu	AluSq2
CAediting_423090	chr5_115829932_-	SINE	Alu	AluSq2
CAediting_423091	chr5_115829935_-	SINE	Alu	AluSq2
CAediting_423092	chr5_115829945_-	SINE	Alu	AluSq2
CAediting_423093	chr5_115830034_-	SINE	Alu	AluSq2
CAediting_423094	chr5_115830035_-	SINE	Alu	AluSq2
CAediting_423095	chr5_115830073_-	SINE	Alu	AluSq2
CAediting_423096	chr5_115830078_-	SINE	Alu	AluSq2
CAediting_423097	chr5_115830091_-	SINE	Alu	AluSq2
CAediting_423098	chr5_115830112_-	SINE	Alu	AluSq2
CAediting_423099	chr5_115830120_-	SINE	Alu	AluSq2
CAediting_423100	chr5_115830600_-	SINE	Alu	AluJr4
CAediting_423101	chr5_115830603_-	SINE	Alu	AluJr4
CAediting_423102	chr5_115830615_-	SINE	Alu	AluJr4
CAediting_423103	chr5_115830619_-	SINE	Alu	AluJr4
CAediting_423104	chr5_115830626_-	SINE	Alu	AluJr4
CAediting_423105	chr5_115830653_-	SINE	Alu	AluJr4
CAediting_423106	chr5_115830654_-	SINE	Alu	AluJr4
CAediting_423107	chr5_115830658_-	SINE	Alu	AluJr4
CAediting_423108	chr5_115830660_-	SINE	Alu	AluJr4
CAediting_423109	chr5_115830704_-	SINE	Alu	AluJr4
CAediting_423110	chr5_115830712_-	SINE	Alu	AluJr4
CAediting_423111	chr5_115830713_-	SINE	Alu	AluJr4
CAediting_423112	chr5_115830733_-	SINE	Alu	AluJr4
CAediting_423113	chr5_115830735_-	SINE	Alu	AluJr4
CAediting_423114	chr5_115830748_-	SINE	Alu	AluJr4
CAediting_423115	chr5_115830749_-	SINE	Alu	AluJr4
CAediting_423116	chr5_115830781_-	SINE	Alu	AluJr4
CAediting_423117	chr5_115830784_-	SINE	Alu	AluJr4
CAediting_423118	chr5_115830796_-	SINE	Alu	AluJr4
CAediting_423119	chr5_115830798_-	SINE	Alu	AluJr4
CAediting_423120	chr5_115837372_-	SINE	Alu	AluSx
CAediting_423121	chr5_115837375_-	SINE	Alu	AluSx
CAediting_423122	chr5_115837402_-	SINE	Alu	AluSx
CAediting_423123	chr5_115838832_-	SINE	Alu	AluSz
CAediting_423124	chr5_115838844_-	SINE	Alu	AluSz
CAediting_423125	chr5_115838871_-	SINE	Alu	AluSz
CAediting_423126	chr5_115838904_-	SINE	Alu	AluSz
CAediting_423127	chr5_115838942_-	SINE	Alu	AluSz
CAediting_423128	chr5_115838956_-	SINE	Alu	AluSz
CAediting_423129	chr5_115838959_-	SINE	Alu	AluSz
CAediting_423130	chr5_115838988_-	SINE	Alu	AluSz
CAediting_423131	chr5_115838991_-	SINE	Alu	AluSz
CAediting_423132	chr5_115839001_-	SINE	Alu	AluSz
CAediting_423133	chr5_115839006_-	SINE	Alu	AluSz
CAediting_423134	chr5_115839011_-	SINE	Alu	AluSz
CAediting_423135	chr5_115839015_-	SINE	Alu	AluSz
CAediting_423136	chr5_115839023_-	SINE	Alu	AluSz
CAediting_423137	chr5_115839040_-	SINE	Alu	AluSz
CAediting_423138	chr5_115839041_-	SINE	Alu	AluSz
CAediting_423139	chr5_115839060_-	SINE	Alu	AluSz
CAediting_423140	chr5_115839077_-	SINE	Alu	AluSz
CAediting_423141	chr5_115839109_-	SINE	Alu	AluSz
CAediting_423142	chr5_115840325_-	SINE	Alu	AluSq2
CAediting_423143	chr5_115840394_-	SINE	Alu	AluSq2
CAediting_423144	chr5_115840395_-	SINE	Alu	AluSq2
CAediting_423145	chr5_115840430_-	SINE	Alu	AluSq2
CAediting_423146	chr5_115840435_-	SINE	Alu	AluSq2
CAediting_423147	chr5_115840436_-	SINE	Alu	AluSq2
CAediting_423148	chr5_115840466_-	SINE	Alu	AluSq2
CAediting_423149	chr5_115840468_-	SINE	Alu	AluSq2
CAediting_423150	chr5_115840471_-	SINE	Alu	AluSq2
CAediting_423151	chr5_115840473_-	SINE	Alu	AluSq2
CAediting_423152	chr5_115840475_-	SINE	Alu	AluSq2
CAediting_423153	chr5_115840476_-	SINE	Alu	AluSq2
CAediting_423154	chr5_115840493_-	SINE	Alu	AluSq2
CAediting_423155	chr5_115840494_-	SINE	Alu	AluSq2
CAediting_423156	chr5_115840501_-	SINE	Alu	AluSq2
CAediting_423157	chr5_115840502_-	SINE	Alu	AluSq2
CAediting_423158	chr5_115840524_-	SINE	Alu	AluSq2
CAediting_423159	chr5_115840548_-	SINE	Alu	AluSq2
CAediting_423160	chr5_115840554_-	SINE	Alu	AluSq2
CAediting_423161	chr5_115840562_-	SINE	Alu	AluSq2
CAediting_423162	chr5_115840565_-	SINE	Alu	AluSq2
CAediting_423163	chr5_115840570_-	SINE	Alu	AluSq2
CAediting_423164	chr5_115840571_-	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for ATG12

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_423154	chr5_115840493_-	115840490:115840498	5SS	0+3i	TGGTAAGAC	-17.11	TGGTAGGAC	-22.22
ES	CAediting_423155	chr5_115840494_-	115840490:115840498	5SS	0+2i	TGGTAAGAC	-17.11	TGGTGAGAC	-16.57

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000145782.11.ATG12.

Correlation between RNA A-to-I editing and PSI for ENSG00000145782.11.ATG12.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATG12

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ATG12

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ATG12

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_423083	chr5_115829866_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3189-3p	115829865	115829871	7mer-m8	115829864	115829887	149.00	-20.43
CAediting_423083	chr5_115829866_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6813-3p	115829864	115829870	7mer-m8	115829863	115829883	140.00	-15.63
CAediting_423091	chr5_115829935_-	ENSG00000145782.11	ENST00000509910	hsa-miR-5197-5p	115829930	115829936	7mer-m8	115829929	115829950	167.00	-16.64
CAediting_423093	chr5_115830034_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3622a-3p	115830030	115830037	8mer-1a	115830030	115830051	148.00	-19.42
CAediting_423093	chr5_115830034_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3622b-3p	115830030	115830037	8mer-1a	115830030	115830050	153.00	-23.04
CAediting_423093	chr5_115830034_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4539	115830034	115830039	6mer	115830033	115830052	141.00	-18.79
CAediting_423096	chr5_115830078_-	ENSG00000145782.11	ENST00000509910	hsa-miR-139-5p	115830078	115830084	7mer-m8	115830077	115830100	150.00	-16.81
CAediting_423096	chr5_115830078_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4252	115830073	115830079	7mer-1a	115830073	115830093	141.00	-21.23
CAediting_423101	chr5_115830603_-	ENSG00000145782.11	ENST00000509910	hsa-miR-891a-3p	115830599	115830605	7mer-m8	115830598	115830619	145.00	-18.51
CAediting_423105	chr5_115830653_-	ENSG00000145782.11	ENST00000509910	hsa-miR-1976	115830650	115830656	7mer-m8	115830649	115830669	149.00	-24.60
CAediting_423105	chr5_115830653_-	ENSG00000145782.11	ENST00000509910	hsa-miR-660-3p	115830648	115830655	8mer-1a	115830648	115830670	149.00	-18.51
CAediting_423105	chr5_115830653_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6747-3p	115830651	115830658	8mer-1a	115830651	115830667	146.00	-24.72
CAediting_423156	chr5_115840501_-	ENSG00000145782.11	ENST00000379594	hsa-miR-3190-5p	115840501	115840507	7mer-m8	115840500	115840519	154.00	-19.64
CAediting_423156	chr5_115840501_-	ENSG00000145782.11	ENST00000513167	hsa-miR-3190-5p	115840501	115840507	7mer-m8	115840500	115840519	154.00	-19.64
CAediting_423084	chr5_115829868_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6771-5p	115829866	115829873	8mer-1a	115829866	115829887	159.00	-28.55
CAediting_423085	chr5_115829885_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4767	115829880	115829886	7mer-m8	115829879	115829904	146.00	-22.74
CAediting_423089	chr5_115829923_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3940-3p	115829919	115829925	7mer-m8	115829918	115829939	140.00	-22.11
CAediting_423090	chr5_115829932_-	ENSG00000145782.11	ENST00000509910	hsa-miR-553	115829929	115829935	7mer-m8	115829928	115829948	171.00	-25.56
CAediting_423097	chr5_115830091_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3940-3p	115830087	115830093	7mer-m8	115830086	115830108	145.00	-21.63
CAediting_423098	chr5_115830112_-	ENSG00000145782.11	ENST00000509910	hsa-miR-340-3p	115830111	115830117	7mer-m8	115830110	115830130	143.00	-14.11
CAediting_423098	chr5_115830112_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6827-3p	115830111	115830117	7mer-m8	115830110	115830130	150.00	-16.89
CAediting_423099	chr5_115830120_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6515-3p	115830114	115830121	8mer-1a	115830114	115830133	140.00	-10.39
CAediting_423103	chr5_115830619_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6511a-3p	115830614	115830620	7mer-m8	115830613	115830635	163.00	-22.58
CAediting_423103	chr5_115830619_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6511a-3p	115830614	115830620	7mer-m8	115830613	115830635	163.00	-22.58
CAediting_423103	chr5_115830619_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6511a-3p	115830614	115830620	7mer-m8	115830613	115830635	163.00	-22.58
CAediting_423103	chr5_115830619_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6511a-3p	115830614	115830620	7mer-m8	115830613	115830635	163.00	-22.58
CAediting_423103	chr5_115830619_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6511b-3p	115830614	115830620	7mer-m8	115830613	115830636	155.00	-21.31
CAediting_423103	chr5_115830619_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6511b-3p	115830614	115830620	7mer-m8	115830613	115830636	155.00	-21.31
CAediting_423104	chr5_115830626_-	ENSG00000145782.11	ENST00000509910	hsa-miR-12113	115830626	115830632	7mer-m8	115830625	115830643	148.00	-19.76
CAediting_423104	chr5_115830626_-	ENSG00000145782.11	ENST00000509910	hsa-miR-345-3p	115830624	115830630	7mer-m8	115830623	115830646	155.00	-27.16
CAediting_423104	chr5_115830626_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4539	115830626	115830632	7mer-m8	115830625	115830649	155.00	-26.42
CAediting_423107	chr5_115830658_-	ENSG00000145782.11	ENST00000509910	hsa-miR-210-5p	115830654	115830661	8mer-1a	115830654	115830675	145.00	-18.70
CAediting_423107	chr5_115830658_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6801-3p	115830656	115830662	7mer-m8	115830655	115830674	146.00	-17.49
CAediting_423107	chr5_115830658_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6810-3p	115830656	115830662	7mer-m8	115830655	115830677	152.00	-20.23
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4785	115830700	115830706	7mer-m8	115830699	115830719	150.00	-21.22
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000509910	hsa-miR-542-5p	115830703	115830710	8mer-1a	115830703	115830728	151.00	-23.29
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000500945	hsa-miR-4785	115830700	115830706	7mer-m8	115830699	115830719	150.00	-21.22
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000500945	hsa-miR-542-5p	115830703	115830710	8mer-1a	115830703	115830728	151.00	-23.29
CAediting_423110	chr5_115830712_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6747-3p	115830710	115830717	8mer-1a	115830710	115830730	153.00	-25.41
CAediting_423110	chr5_115830712_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6747-3p	115830710	115830717	8mer-1a	115830710	115830730	153.00	-25.41
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3176	115830729	115830735	7mer-m8	115830728	115830746	154.00	-20.57
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3922-3p	115830729	115830735	7mer-m8	115830728	115830750	159.00	-20.29
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6878-3p	115830730	115830736	7mer-m8	115830729	115830749	144.00	-19.19
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000500945	hsa-miR-3176	115830729	115830735	7mer-m8	115830728	115830746	154.00	-20.57
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000500945	hsa-miR-3922-3p	115830729	115830735	7mer-m8	115830728	115830750	159.00	-20.29
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6878-3p	115830730	115830736	7mer-m8	115830729	115830749	144.00	-19.19
CAediting_423114	chr5_115830748_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6878-3p	115830744	115830750	7mer-m8	115830743	115830764	149.00	-20.04
CAediting_423114	chr5_115830748_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6878-3p	115830744	115830750	7mer-m8	115830743	115830764	149.00	-20.04
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-518a-3p	115830777	115830783	7mer-m8	115830776	115830797	145.00	-17.16
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-518a-3p	115830777	115830783	7mer-m8	115830776	115830797	145.00	-17.16
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-518b	115830777	115830783	7mer-m8	115830776	115830796	146.00	-21.80
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-518c-3p	115830777	115830783	7mer-m8	115830776	115830798	146.00	-21.31
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-518d-3p	115830777	115830783	7mer-m8	115830776	115830796	145.00	-17.84
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-518e-3p	115830778	115830784	7mer-m8	115830777	115830798	144.00	-19.12
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-518f-3p	115830777	115830783	7mer-m8	115830776	115830796	145.00	-17.49
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-526a-3p	115830777	115830783	7mer-m8	115830776	115830796	146.00	-17.72
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-518a-3p	115830777	115830783	7mer-m8	115830776	115830797	145.00	-17.16
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-518a-3p	115830777	115830783	7mer-m8	115830776	115830797	145.00	-17.16
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-518b	115830777	115830783	7mer-m8	115830776	115830796	146.00	-21.80
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-518c-3p	115830777	115830783	7mer-m8	115830776	115830798	146.00	-21.31
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-518d-3p	115830777	115830783	7mer-m8	115830776	115830796	145.00	-17.84
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-518e-3p	115830778	115830784	7mer-m8	115830777	115830798	144.00	-19.12
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-518f-3p	115830777	115830783	7mer-m8	115830776	115830796	145.00	-17.49
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-526a-3p	115830777	115830783	7mer-m8	115830776	115830796	146.00	-17.72
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000509910	hsa-miR-371a-3p	115830779	115830785	7mer-m8	115830778	115830800	145.00	-17.04
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000500945	hsa-miR-371a-3p	115830779	115830785	7mer-m8	115830778	115830800	145.00	-17.04
CAediting_423158	chr5_115840524_-	ENSG00000145782.11	ENST00000379594	hsa-miR-378a-5p	115840522	115840528	7mer-m8	115840521	115840542	163.00	-27.26
CAediting_423158	chr5_115840524_-	ENSG00000145782.11	ENST00000513167	hsa-miR-378a-5p	115840522	115840528	7mer-m8	115840521	115840542	163.00	-27.26
CAediting_423159	chr5_115840548_-	ENSG00000145782.11	ENST00000513167	hsa-miR-6849-3p	115840548	115840554	7mer-m8	115840547	115840568	142.00	-16.85
CAediting_423160	chr5_115840554_-	ENSG00000145782.11	ENST00000513167	hsa-miR-4690-3p	115840548	115840555	8mer-1a	115840548	115840568	154.00	-21.32
CAediting_423160	chr5_115840554_-	ENSG00000145782.11	ENST00000513167	hsa-miR-5685	115840548	115840555	8mer-1a	115840548	115840569	148.00	-22.83
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-518a-3p	115840558	115840564	7mer-m8	115840557	115840578	145.00	-16.96
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-518a-3p	115840558	115840564	7mer-m8	115840557	115840578	145.00	-16.96
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-518b	115840558	115840564	7mer-m8	115840557	115840580	146.00	-21.28
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-518c-3p	115840558	115840564	7mer-m8	115840557	115840581	151.00	-22.17
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-518d-3p	115840558	115840564	7mer-m8	115840557	115840577	145.00	-17.84
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-518e-3p	115840559	115840565	7mer-m8	115840558	115840580	145.00	-18.64
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-518f-3p	115840558	115840564	7mer-m8	115840557	115840577	145.00	-16.97
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-526a-3p	115840558	115840564	7mer-m8	115840557	115840580	146.00	-17.52
CAediting_423162	chr5_115840565_-	ENSG00000145782.11	ENST00000513167	hsa-miR-371a-3p	115840560	115840566	7mer-m8	115840559	115840581	153.00	-22.17
CAediting_423163	chr5_115840570_-	ENSG00000145782.11	ENST00000513167	hsa-miR-3199	115840565	115840571	7mer-1a	115840565	115840584	141.00	-22.83
CAediting_423163	chr5_115840570_-	ENSG00000145782.11	ENST00000513167	hsa-miR-3199	115840565	115840571	7mer-1a	115840565	115840584	141.00	-22.83
CAediting_423164	chr5_115840571_-	ENSG00000145782.11	ENST00000513167	hsa-miR-513a-5p	115840570	115840576	7mer-m8	115840569	115840586	148.00	-20.07
CAediting_423164	chr5_115840571_-	ENSG00000145782.11	ENST00000513167	hsa-miR-513a-5p	115840570	115840576	7mer-m8	115840569	115840586	148.00	-20.07
CAediting_423164	chr5_115840571_-	ENSG00000145782.11	ENST00000513167	hsa-miR-638	115840565	115840571	7mer-1a	115840565	115840589	151.00	-32.12
CAediting_423086	chr5_115829889_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4776-5p	115829885	115829891	7mer-m8	115829884	115829907	143.00	-21.44
CAediting_423086	chr5_115829889_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4776-5p	115829885	115829891	7mer-m8	115829884	115829907	143.00	-21.44
CAediting_423086	chr5_115829889_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4800-5p	115829884	115829890	7mer-m8	115829883	115829903	144.00	-21.98
CAediting_423088	chr5_115829910_-	ENSG00000145782.11	ENST00000509910	hsa-miR-28-5p	115829905	115829911	7mer-m8	115829904	115829924	143.00	-18.76
CAediting_423088	chr5_115829910_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3139	115829905	115829911	7mer-m8	115829904	115829926	157.00	-23.25
CAediting_423088	chr5_115829910_-	ENSG00000145782.11	ENST00000509910	hsa-miR-708-5p	115829905	115829911	7mer-m8	115829904	115829925	154.00	-22.59
CAediting_423092	chr5_115829945_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6747-3p	115829941	115829947	7mer-m8	115829940	115829959	151.00	-20.82
CAediting_423092	chr5_115829945_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6752-3p	115829940	115829946	7mer-m8	115829939	115829959	153.00	-21.52
CAediting_423092	chr5_115829945_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6836-3p	115829943	115829949	7mer-m8	115829942	115829962	142.00	-14.77
CAediting_423102	chr5_115830615_-	ENSG00000145782.11	ENST00000509910	hsa-miR-1180-5p	115830612	115830618	7mer-m8	115830611	115830631	142.00	-19.76
CAediting_423102	chr5_115830615_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4301	115830614	115830620	7mer-m8	115830613	115830631	155.00	-19.40
CAediting_423102	chr5_115830615_-	ENSG00000145782.11	ENST00000509910	hsa-miR-551a	115830611	115830617	7mer-m8	115830610	115830630	154.00	-22.51
CAediting_423102	chr5_115830615_-	ENSG00000145782.11	ENST00000509910	hsa-miR-551b-3p	115830611	115830617	7mer-m8	115830610	115830636	148.00	-22.34
CAediting_423102	chr5_115830615_-	ENSG00000145782.11	ENST00000509910	hsa-miR-7114-3p	115830612	115830618	7mer-m8	115830611	115830631	140.00	-20.28

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_423096	chr5_115830078_-	ENSG00000145782.11	ENST00000509910	hsa-miR-10399-5p	115830077	115830083	7mer-m8	115830076	115830097	146	-11.69
CAediting_423108	chr5_115830660_-	ENSG00000145782.11	ENST00000509910	hsa-miR-1184	115830658	115830665	8mer-1a	115830658	115830677	149	-15.3
CAediting_423108	chr5_115830660_-	ENSG00000145782.11	ENST00000509910	hsa-miR-1184	115830658	115830665	8mer-1a	115830658	115830677	149	-15.3
CAediting_423108	chr5_115830660_-	ENSG00000145782.11	ENST00000509910	hsa-miR-1184	115830658	115830665	8mer-1a	115830658	115830677	149	-15.3
CAediting_423100	chr5_115830600_-	ENSG00000145782.11	ENST00000509910	hsa-miR-150-3p	115830600	115830606	7mer-m8	115830599	115830620	148	-14.12
CAediting_423101	chr5_115830603_-	ENSG00000145782.11	ENST00000509910	hsa-miR-150-3p	115830600	115830606	7mer-m8	115830599	115830620	148	-14.12
CAediting_423090	chr5_115829932_-	ENSG00000145782.11	ENST00000509910	hsa-miR-224-3p	115829929	115829935	7mer-m8	115829928	115829952	150	-22.28
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-302a-3p	115830778	115830784	7mer-m8	115830777	115830798	147	-15.45
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-302b-3p	115830778	115830784	7mer-m8	115830777	115830804	144	-12.81
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-302c-3p	115830778	115830784	7mer-m8	115830777	115830797	145	-11.96
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-302d-3p	115830778	115830784	7mer-m8	115830777	115830804	148	-12.96
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-302e	115830778	115830784	7mer-m8	115830777	115830793	141	-8.62
CAediting_423084	chr5_115829868_-	ENSG00000145782.11	ENST00000509910	hsa-miR-30b-3p	115829867	115829874	8mer-1a	115829867	115829888	147	-15.96
CAediting_423085	chr5_115829885_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3165	115829883	115829889	7mer-m8	115829882	115829901	145	-16.11
CAediting_423089	chr5_115829923_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3190-5p	115829922	115829928	7mer-m8	115829921	115829940	141	-15.59
CAediting_423092	chr5_115829945_-	ENSG00000145782.11	ENST00000509910	hsa-miR-339-5p	115829940	115829946	7mer-m8	115829939	115829960	151	-20.51
CAediting_423093	chr5_115830034_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3614-5p	115830030	115830036	7mer-1a	115830030	115830052	144	-22.44
CAediting_423094	chr5_115830035_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3614-5p	115830030	115830036	7mer-1a	115830030	115830052	144	-22.44
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3663-5p	115830729	115830735	7mer-m8	115830728	115830751	145	-20.71
CAediting_423102	chr5_115830615_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3680-5p	115830613	115830619	7mer-m8	115830612	115830632	144	-15.55
CAediting_423102	chr5_115830615_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3680-5p	115830613	115830619	7mer-m8	115830612	115830632	144	-15.55
CAediting_423084	chr5_115829868_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3689a-3p	115829867	115829874	8mer-1a	115829867	115829888	141	-19.53
CAediting_423084	chr5_115829868_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3689b-3p	115829867	115829874	8mer-1a	115829867	115829888	141	-19.58
CAediting_423084	chr5_115829868_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3689c	115829867	115829874	8mer-1a	115829867	115829888	141	-19.58
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-372-3p	115830778	115830784	7mer-m8	115830777	115830804	155	-17.99
CAediting_423118	chr5_115830796_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3934-5p	115830792	115830798	7mer-m8	115830791	115830813	147	-18.32
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4259	115830701	115830707	7mer-m8	115830700	115830723	144	-15.14
CAediting_423092	chr5_115829945_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4421	115829941	115829947	7mer-m8	115829940	115829963	151	-15.12
CAediting_423090	chr5_115829932_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4698	115829927	115829933	7mer-m8	115829926	115829944	152	-16.84
CAediting_423104	chr5_115830626_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4780	115830623	115830629	7mer-m8	115830622	115830645	149	-20.16
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000509910	hsa-miR-5089-5p	115830784	115830790	7mer-m8	115830783	115830804	148	-13.62
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000509910	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000509910	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423097	chr5_115830091_-	ENSG00000145782.11	ENST00000509910	hsa-miR-5189-5p	115830090	115830096	7mer-m8	115830089	115830114	150	-24.25
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-519d-3p	115830777	115830783	7mer-m8	115830776	115830796	146	-14.54
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-520a-3p	115830778	115830784	7mer-m8	115830777	115830798	140	-11.04
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-520b-3p	115830778	115830784	7mer-m8	115830777	115830796	141	-16.53
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-520c-3p	115830778	115830784	7mer-m8	115830777	115830797	146	-16.53
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-520d-3p	115830778	115830784	7mer-m8	115830777	115830800	142	-15.59
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-520e-3p	115830778	115830784	7mer-m8	115830777	115830797	140	-13.33
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-520g-3p	115830776	115830782	7mer-m8	115830775	115830798	151	-19.1
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-520h	115830776	115830782	7mer-m8	115830775	115830796	150	-15.08
CAediting_423090	chr5_115829932_-	ENSG00000145782.11	ENST00000509910	hsa-miR-522-3p	115829929	115829935	7mer-m8	115829928	115829952	142	-14.93
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000509910	hsa-miR-526b-3p	115830777	115830783	7mer-m8	115830776	115830796	146	-16.21
CAediting_423089	chr5_115829923_-	ENSG00000145782.11	ENST00000509910	hsa-miR-548s	115829923	115829929	7mer-m8	115829922	115829944	152	-14.16
CAediting_423118	chr5_115830796_-	ENSG00000145782.11	ENST00000509910	hsa-miR-552-3p	115830790	115830797	8mer-1a	115830790	115830810	140	-15.03
CAediting_423092	chr5_115829945_-	ENSG00000145782.11	ENST00000509910	hsa-miR-5699-3p	115829941	115829947	7mer-m8	115829940	115829961	149	-16.8
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000509910	hsa-miR-571	115830700	115830706	7mer-m8	115830699	115830719	154	-14.95
CAediting_423097	chr5_115830091_-	ENSG00000145782.11	ENST00000509910	hsa-miR-612	115830090	115830096	7mer-m8	115830089	115830113	147	-21.52
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6131	115830728	115830734	7mer-m8	115830727	115830745	140	-18.62
CAediting_423098	chr5_115830112_-	ENSG00000145782.11	ENST00000509910	hsa-miR-626	115830110	115830116	7mer-m8	115830109	115830127	140	-10.52
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6506-5p	115830783	115830789	7mer-m8	115830782	115830804	144	-13.21
CAediting_423097	chr5_115830091_-	ENSG00000145782.11	ENST00000509910	hsa-miR-661	115830088	115830094	7mer-m8	115830087	115830110	151	-23.74
CAediting_423085	chr5_115829885_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6745	115829882	115829888	7mer-m8	115829881	115829905	145	-23.91
CAediting_423085	chr5_115829885_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6756-5p	115829882	115829887	6mer	115829881	115829905	143	-27.38
CAediting_423084	chr5_115829868_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6779-5p	115829867	115829874	8mer-1a	115829867	115829890	147	-25.77
CAediting_423098	chr5_115830112_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6818-3p	115830112	115830118	7mer-m8	115830111	115830132	145	-12.39
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6843-3p	115830730	115830736	7mer-m8	115830729	115830748	144	-13.45
CAediting_423113	chr5_115830735_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6843-3p	115830730	115830736	7mer-m8	115830729	115830748	144	-13.45
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6848-3p	115830730	115830736	7mer-m8	115830729	115830747	140	-13.76
CAediting_423113	chr5_115830735_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6848-3p	115830730	115830736	7mer-m8	115830729	115830747	140	-13.76
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6857-5p	115830703	115830710	8mer-1a	115830703	115830724	152	-23.45
CAediting_423097	chr5_115830091_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6860	115830090	115830096	7mer-m8	115830089	115830113	146	-23.55
CAediting_423098	chr5_115830112_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6876-3p	115830110	115830116	7mer-m8	115830109	115830132	144	-10.9
CAediting_423105	chr5_115830653_-	ENSG00000145782.11	ENST00000509910	hsa-miR-6881-3p	115830648	115830654	7mer-m8	115830647	115830668	149	-15.33
CAediting_423108	chr5_115830660_-	ENSG00000145782.11	ENST00000509910	hsa-miR-7156-3p	115830660	115830666	7mer-m8	115830659	115830681	140	-16.51
CAediting_423085	chr5_115829885_-	ENSG00000145782.11	ENST00000509910	hsa-miR-8056	115829884	115829889	6mer	115829883	115829902	142	-18.58
CAediting_423086	chr5_115829889_-	ENSG00000145782.11	ENST00000509910	hsa-miR-8056	115829884	115829889	6mer	115829883	115829902	142	-18.58
CAediting_423084	chr5_115829868_-	ENSG00000145782.11	ENST00000509910	hsa-miR-887-5p	115829866	115829873	8mer-1a	115829866	115829886	147	-13.95
CAediting_423097	chr5_115830091_-	ENSG00000145782.11	ENST00000509910	hsa-miR-939-3p	115830089	115830095	7mer-m8	115830088	115830108	141	-16.71
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-302a-3p	115830778	115830784	7mer-m8	115830777	115830798	147	-15.45
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-302b-3p	115830778	115830784	7mer-m8	115830777	115830804	144	-12.81
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-302c-3p	115830778	115830784	7mer-m8	115830777	115830797	145	-11.96
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-302d-3p	115830778	115830784	7mer-m8	115830777	115830804	148	-12.96
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-302e	115830778	115830784	7mer-m8	115830777	115830793	141	-8.62
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000500945	hsa-miR-3663-5p	115830729	115830735	7mer-m8	115830728	115830751	145	-20.71
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-372-3p	115830778	115830784	7mer-m8	115830777	115830804	155	-17.99
CAediting_423118	chr5_115830796_-	ENSG00000145782.11	ENST00000500945	hsa-miR-3934-5p	115830792	115830798	7mer-m8	115830791	115830813	147	-18.32
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000500945	hsa-miR-4259	115830701	115830707	7mer-m8	115830700	115830723	144	-15.14
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000500945	hsa-miR-5089-5p	115830784	115830790	7mer-m8	115830783	115830804	148	-13.62
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000500945	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000500945	hsa-miR-512-3p	115830779	115830785	7mer-m8	115830778	115830803	150	-18.68
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-519d-3p	115830777	115830783	7mer-m8	115830776	115830796	146	-14.54
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-520a-3p	115830778	115830784	7mer-m8	115830777	115830798	140	-11.04
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-520b-3p	115830778	115830784	7mer-m8	115830777	115830796	141	-16.53
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-520c-3p	115830778	115830784	7mer-m8	115830777	115830797	146	-16.53
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-520d-3p	115830778	115830784	7mer-m8	115830777	115830800	142	-15.59
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-520e-3p	115830778	115830784	7mer-m8	115830777	115830797	140	-13.33
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-520g-3p	115830776	115830782	7mer-m8	115830775	115830798	151	-19.1
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-520h	115830776	115830782	7mer-m8	115830775	115830796	150	-15.08
CAediting_423116	chr5_115830781_-	ENSG00000145782.11	ENST00000500945	hsa-miR-526b-3p	115830777	115830783	7mer-m8	115830776	115830796	146	-16.21
CAediting_423118	chr5_115830796_-	ENSG00000145782.11	ENST00000500945	hsa-miR-552-3p	115830790	115830797	8mer-1a	115830790	115830810	140	-15.03
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000500945	hsa-miR-571	115830700	115830706	7mer-m8	115830699	115830719	154	-14.95
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6131	115830728	115830734	7mer-m8	115830727	115830745	140	-18.62
CAediting_423117	chr5_115830784_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6506-5p	115830783	115830789	7mer-m8	115830782	115830804	144	-13.21
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6843-3p	115830730	115830736	7mer-m8	115830729	115830748	144	-13.45
CAediting_423113	chr5_115830735_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6843-3p	115830730	115830736	7mer-m8	115830729	115830748	144	-13.45
CAediting_423112	chr5_115830733_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6848-3p	115830730	115830736	7mer-m8	115830729	115830747	140	-13.76
CAediting_423113	chr5_115830735_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6848-3p	115830730	115830736	7mer-m8	115830729	115830747	140	-13.76
CAediting_423109	chr5_115830704_-	ENSG00000145782.11	ENST00000500945	hsa-miR-6857-5p	115830703	115830710	8mer-1a	115830703	115830724	152	-23.45
CAediting_423157	chr5_115840502_-	ENSG00000145782.11	ENST00000379594	hsa-miR-4435	115840501	115840508	8mer-1a	115840501	115840521	146	-18.85
CAediting_423157	chr5_115840502_-	ENSG00000145782.11	ENST00000379594	hsa-miR-4435	115840501	115840508	8mer-1a	115840501	115840521	146	-18.85
CAediting_423156	chr5_115840501_-	ENSG00000145782.11	ENST00000379594	hsa-miR-4781-3p	115840498	115840504	7mer-m8	115840497	115840515	144	-13.86
CAediting_423157	chr5_115840502_-	ENSG00000145782.11	ENST00000379594	hsa-miR-4781-3p	115840498	115840504	7mer-m8	115840497	115840515	144	-13.86
CAediting_423163	chr5_115840570_-	ENSG00000145782.11	ENST00000513167	hsa-miR-10399-5p	115840569	115840575	7mer-m8	115840568	115840589	148	-11.2
CAediting_423164	chr5_115840571_-	ENSG00000145782.11	ENST00000513167	hsa-miR-10399-5p	115840569	115840575	7mer-m8	115840568	115840589	148	-11.2
CAediting_423160	chr5_115840554_-	ENSG00000145782.11	ENST00000513167	hsa-miR-24-1-5p	115840551	115840556	6mer	115840550	115840571	140	-15.07
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-302a-3p	115840559	115840565	7mer-m8	115840558	115840579	142	-11.06
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-302b-3p	115840559	115840565	7mer-m8	115840558	115840580	141	-12.08
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-302c-3p	115840559	115840565	7mer-m8	115840558	115840578	145	-11.96
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-302d-3p	115840559	115840565	7mer-m8	115840558	115840581	148	-17.16
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-302e	115840559	115840565	7mer-m8	115840558	115840574	141	-8.62
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-372-3p	115840559	115840565	7mer-m8	115840558	115840581	155	-18.38
CAediting_423157	chr5_115840502_-	ENSG00000145782.11	ENST00000513167	hsa-miR-4435	115840501	115840508	8mer-1a	115840501	115840521	146	-18.85
CAediting_423157	chr5_115840502_-	ENSG00000145782.11	ENST00000513167	hsa-miR-4435	115840501	115840508	8mer-1a	115840501	115840521	146	-18.85
CAediting_423162	chr5_115840565_-	ENSG00000145782.11	ENST00000513167	hsa-miR-4731-5p	115840562	115840568	7mer-1a	115840562	115840582	146	-26.76
CAediting_423156	chr5_115840501_-	ENSG00000145782.11	ENST00000513167	hsa-miR-4781-3p	115840498	115840504	7mer-m8	115840497	115840515	144	-13.86
CAediting_423157	chr5_115840502_-	ENSG00000145782.11	ENST00000513167	hsa-miR-4781-3p	115840498	115840504	7mer-m8	115840497	115840515	144	-13.86
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-512-3p	115840560	115840566	7mer-m8	115840559	115840580	152	-15.9
CAediting_423162	chr5_115840565_-	ENSG00000145782.11	ENST00000513167	hsa-miR-512-3p	115840560	115840566	7mer-m8	115840559	115840580	152	-15.9
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-512-3p	115840560	115840566	7mer-m8	115840559	115840580	152	-15.9
CAediting_423162	chr5_115840565_-	ENSG00000145782.11	ENST00000513167	hsa-miR-512-3p	115840560	115840566	7mer-m8	115840559	115840580	152	-15.9
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-519d-3p	115840558	115840564	7mer-m8	115840557	115840577	146	-14.02
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-520a-3p	115840559	115840565	7mer-m8	115840558	115840579	140	-11.08
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-520b-3p	115840559	115840565	7mer-m8	115840558	115840580	141	-16.54
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-520c-3p	115840559	115840565	7mer-m8	115840558	115840578	146	-16.66
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-520d-3p	115840559	115840565	7mer-m8	115840558	115840579	140	-12.8
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-520e-3p	115840559	115840565	7mer-m8	115840558	115840578	140	-13.15
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-520h	115840557	115840563	7mer-m8	115840556	115840577	150	-15.08
CAediting_423161	chr5_115840562_-	ENSG00000145782.11	ENST00000513167	hsa-miR-526b-3p	115840558	115840564	7mer-m8	115840557	115840580	146	-15.69
CAediting_423163	chr5_115840570_-	ENSG00000145782.11	ENST00000513167	hsa-miR-6504-3p	115840569	115840575	7mer-m8	115840568	115840589	153	-14.35
CAediting_423164	chr5_115840571_-	ENSG00000145782.11	ENST00000513167	hsa-miR-6504-3p	115840569	115840575	7mer-m8	115840568	115840589	153	-14.35
CAediting_423162	chr5_115840565_-	ENSG00000145782.11	ENST00000513167	hsa-miR-6506-5p	115840564	115840570	7mer-m8	115840563	115840585	144	-12.88

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1306324	chr19_13836464_-	ENSG00000145782.11	ENST00000513322	hsa-miR-27a-3p	115841121	115841127	7mer-m8	115841120	115841142	156	-21.45
CAediting_1229413	chr17_67471544_+	ENSG00000145782.11	ENST00000509910	hsa-miR-548aa	115831303	115831310	8mer-1a	115831303	115831331	156	-13.39
CAediting_86358	chr1_109598906_+	ENSG00000145782.11	ENST00000509910	hsa-miR-197-5p	115829882	115829888	7mer-m8	115829881	115829910	155	-37.59
CAediting_117844	chr1_162342605_+	ENSG00000145782.11	ENST00000509910	hsa-miR-556-3p	115828321	115828327	7mer-m8	115828320	115828341	153	-18.03
CAediting_580943	chr7_100356700_+	ENSG00000145782.11	ENST00000509910	hsa-miR-6840-3p	115830039	115830045	7mer-m8	115830038	115830059	143	-24.68
CAediting_1229413	chr17_67471544_+	ENSG00000145782.11	ENST00000500945	hsa-miR-548aa	115831303	115831310	8mer-1a	115831303	115831331	156	-13.39
CAediting_228905	chr2_188297554_+	ENSG00000145782.11	ENST00000513322	hsa-miR-561-3p	115832609	115832614	6mer	115832608	115832629	146	-11.2
CAediting_228905	chr2_188297554_+	ENSG00000145782.11	ENST00000379594	hsa-miR-561-3p	115832609	115832614	6mer	115832608	115832629	146	-11.2
CAediting_228905	chr2_188297554_+	ENSG00000145782.11	ENST00000505993	hsa-miR-561-3p	115832609	115832614	6mer	115832608	115832629	146	-11.2
CAediting_228905	chr2_188297554_+	ENSG00000145782.11	ENST00000513167	hsa-miR-561-3p	115832609	115832614	6mer	115832608	115832629	146	-11.2

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000145782.11	ENST00000509910	hsa-miR-195-3p	115829522	115829528	7mer-m8	115829521	115829544	151	-11.34
CAediting_1160181	chr17_7017644_-	ENSG00000145782.11	ENST00000509910	hsa-miR-195-3p	115828232	115828238	7mer-m8	115828231	115828254	145	-12.13
CAediting_604450	chr7_133034877_-	ENSG00000145782.11	ENST00000509910	hsa-miR-3654	115828810	115828816	7mer-m8	115828809	115828832	150	-25.64
CAediting_77128	chr1_85133844_+	ENSG00000145782.11	ENST00000509910	hsa-miR-4423-3p	115828249	115828255	7mer-m8	115828248	115828269	150	-12.66
CAediting_396018	chr5_1062918_-	ENSG00000145782.11	ENST00000509910	hsa-miR-4635	115828949	115828955	7mer-m8	115828948	115828967	143	-12
CAediting_228905	chr2_188297554_+	ENSG00000145782.11	ENST00000509910	hsa-miR-561-3p	115829187	115829193	7mer-m8	115829186	115829207	145	-5.88
CAediting_1229413	chr17_67471544_+	ENSG00000145782.11	ENST00000500945	hsa-miR-548aa	115831834	115831841	8mer-1a	115831834	115831857	155	-13.73
CAediting_1229415	chr17_67471547_+	ENSG00000145782.11	ENST00000500945	hsa-miR-548aa	115831834	115831841	8mer-1a	115831834	115831857	155	-13.73

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATG12

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000509910.1	protein_coding
ENST00000505252.1	retained_intron
ENST00000500945.2	protein_coding
ENST00000379594.6	nonsense_mediated_decay
ENST00000509598.4	processed_transcript
ENST00000513167.1	nonsense_mediated_decay
ENST00000514775.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_423081	ENST00000509910.1	chr5_115829841_-	-1171.52	-1171.92	-1209.52
CAediting_423082	ENST00000509910.1	chr5_115829854_-	-1168.92	-1171.92	-1209.52
CAediting_423083	ENST00000509910.1	chr5_115829866_-	-1171.62	-1171.92	-1209.52
CAediting_423084	ENST00000509910.1	chr5_115829868_-	-1171.62	-1171.92	-1209.52
CAediting_423085	ENST00000509910.1	chr5_115829885_-	-1171.92	-1171.92	-1209.52
CAediting_423086	ENST00000509910.1	chr5_115829889_-	-1171.42	-1171.92	-1209.52
CAediting_423087	ENST00000509910.1	chr5_115829899_-	-1177.52	-1171.92	-1209.52
CAediting_423088	ENST00000509910.1	chr5_115829910_-	-1171.92	-1171.92	-1209.52
CAediting_423089	ENST00000509910.1	chr5_115829923_-	-1171.22	-1171.92	-1209.52
CAediting_423090	ENST00000509910.1	chr5_115829932_-	-1172.92	-1171.92	-1209.52
CAediting_423091	ENST00000509910.1	chr5_115829935_-	-1178.62	-1171.92	-1209.52
CAediting_423092	ENST00000509910.1	chr5_115829945_-	-1172.92	-1171.92	-1209.52
CAediting_423093	ENST00000509910.1	chr5_115830034_-	-1178.52	-1171.92	-1209.52
CAediting_423094	ENST00000509910.1	chr5_115830035_-	-1171.22	-1171.92	-1209.52
CAediting_423095	ENST00000509910.1	chr5_115830073_-	-1172.22	-1171.92	-1209.52
CAediting_423096	ENST00000509910.1	chr5_115830078_-	-1178.12	-1171.92	-1209.52
CAediting_423097	ENST00000509910.1	chr5_115830091_-	-1171.32	-1171.92	-1209.52
CAediting_423098	ENST00000509910.1	chr5_115830112_-	-1175.72	-1171.92	-1209.52
CAediting_423099	ENST00000509910.1	chr5_115830120_-	-1171.92	-1171.92	-1209.52
CAediting_423100	ENST00000509910.1	chr5_115830600_-	-1171.22	-1171.92	-1209.52
CAediting_423101	ENST00000509910.1	chr5_115830603_-	-1178.62	-1171.92	-1209.52
CAediting_423102	ENST00000509910.1	chr5_115830615_-	-1171.02	-1171.92	-1209.52
CAediting_423103	ENST00000509910.1	chr5_115830619_-	-1170.52	-1171.92	-1209.52
CAediting_423104	ENST00000509910.1	chr5_115830626_-	-1175.62	-1171.92	-1209.52
CAediting_423105	ENST00000509910.1	chr5_115830653_-	-1178.52	-1171.92	-1209.52
CAediting_423106	ENST00000509910.1	chr5_115830654_-	-1171.22	-1171.92	-1209.52
CAediting_423107	ENST00000509910.1	chr5_115830658_-	-1171.02	-1171.92	-1209.52
CAediting_423108	ENST00000509910.1	chr5_115830660_-	-1172.32	-1171.92	-1209.52
CAediting_423109	ENST00000509910.1	chr5_115830704_-	-1172.12	-1171.92	-1209.52
CAediting_423110	ENST00000509910.1	chr5_115830712_-	-1171.52	-1171.92	-1209.52
CAediting_423111	ENST00000509910.1	chr5_115830713_-	-1172.32	-1171.92	-1209.52
CAediting_423112	ENST00000509910.1	chr5_115830733_-	-1171.32	-1171.92	-1209.52
CAediting_423113	ENST00000509910.1	chr5_115830735_-	-1171.02	-1171.92	-1209.52
CAediting_423114	ENST00000509910.1	chr5_115830748_-	-1176.92	-1171.92	-1209.52
CAediting_423115	ENST00000509910.1	chr5_115830749_-	-1171.02	-1171.92	-1209.52
CAediting_423116	ENST00000509910.1	chr5_115830781_-	-1171.52	-1171.92	-1209.52
CAediting_423117	ENST00000509910.1	chr5_115830784_-	-1171.22	-1171.92	-1209.52
CAediting_423118	ENST00000509910.1	chr5_115830796_-	-1171.52	-1171.92	-1209.52
CAediting_423119	ENST00000509910.1	chr5_115830798_-	-1170.92	-1171.92	-1209.52
CAediting_423100	ENST00000505252.1	chr5_115830600_-	-775.50	-774.00	-795.60
CAediting_423101	ENST00000505252.1	chr5_115830603_-	-774.40	-774.00	-795.60
CAediting_423102	ENST00000505252.1	chr5_115830615_-	-778.10	-774.00	-795.60
CAediting_423103	ENST00000505252.1	chr5_115830619_-	-775.90	-774.00	-795.60
CAediting_423104	ENST00000505252.1	chr5_115830626_-	-779.60	-774.00	-795.60
CAediting_423105	ENST00000505252.1	chr5_115830653_-	-777.60	-774.00	-795.60
CAediting_423106	ENST00000505252.1	chr5_115830654_-	-775.20	-774.00	-795.60
CAediting_423107	ENST00000505252.1	chr5_115830658_-	-779.00	-774.00	-795.60
CAediting_423108	ENST00000505252.1	chr5_115830660_-	-774.00	-774.00	-795.60
CAediting_423109	ENST00000505252.1	chr5_115830704_-	-774.70	-774.00	-795.60
CAediting_423110	ENST00000505252.1	chr5_115830712_-	-777.30	-774.00	-795.60
CAediting_423111	ENST00000505252.1	chr5_115830713_-	-774.60	-774.00	-795.60
CAediting_423112	ENST00000505252.1	chr5_115830733_-	-774.30	-774.00	-795.60
CAediting_423113	ENST00000505252.1	chr5_115830735_-	-777.10	-774.00	-795.60
CAediting_423114	ENST00000505252.1	chr5_115830748_-	-773.70	-774.00	-795.60
CAediting_423115	ENST00000505252.1	chr5_115830749_-	-773.50	-774.00	-795.60
CAediting_423116	ENST00000505252.1	chr5_115830781_-	-773.60	-774.00	-795.60
CAediting_423117	ENST00000505252.1	chr5_115830784_-	-776.60	-774.00	-795.60
CAediting_423118	ENST00000505252.1	chr5_115830796_-	-773.60	-774.00	-795.60
CAediting_423119	ENST00000505252.1	chr5_115830798_-	-774.00	-774.00	-795.60
CAediting_423109	ENST00000500945.2	chr5_115830704_-	-375.40	-375.40	-382.10
CAediting_423110	ENST00000500945.2	chr5_115830712_-	-376.10	-375.40	-382.10
CAediting_423111	ENST00000500945.2	chr5_115830713_-	-376.80	-375.40	-382.10
CAediting_423112	ENST00000500945.2	chr5_115830733_-	-374.80	-375.40	-382.10
CAediting_423113	ENST00000500945.2	chr5_115830735_-	-377.50	-375.40	-382.10
CAediting_423114	ENST00000500945.2	chr5_115830748_-	-375.10	-375.40	-382.10
CAediting_423115	ENST00000500945.2	chr5_115830749_-	-374.90	-375.40	-382.10
CAediting_423116	ENST00000500945.2	chr5_115830781_-	-375.00	-375.40	-382.10
CAediting_423117	ENST00000500945.2	chr5_115830784_-	-378.00	-375.40	-382.10
CAediting_423118	ENST00000500945.2	chr5_115830796_-	-375.00	-375.40	-382.10
CAediting_423119	ENST00000500945.2	chr5_115830798_-	-375.40	-375.40	-382.10
CAediting_423156	ENST00000379594.6	chr5_115840501_-	-323.80	-322.90	-335.50
CAediting_423157	ENST00000379594.6	chr5_115840502_-	-322.80	-322.90	-335.50
CAediting_423158	ENST00000379594.6	chr5_115840524_-	-324.30	-322.90	-335.50
CAediting_423159	ENST00000379594.6	chr5_115840548_-	-329.10	-322.90	-335.50
CAediting_423160	ENST00000379594.6	chr5_115840554_-	-325.60	-322.90	-335.50
CAediting_423161	ENST00000379594.6	chr5_115840562_-	-324.60	-322.90	-335.50
CAediting_423162	ENST00000379594.6	chr5_115840565_-	-322.20	-322.90	-335.50
CAediting_423163	ENST00000379594.6	chr5_115840570_-	-325.50	-322.90	-335.50
CAediting_423164	ENST00000379594.6	chr5_115840571_-	-324.80	-322.90	-335.50
CAediting_423123	ENST00000509598.4	chr5_115838832_-	-533.30	-530.70	-552.30
CAediting_423124	ENST00000509598.4	chr5_115838844_-	-534.40	-530.70	-552.30
CAediting_423125	ENST00000509598.4	chr5_115838871_-	-532.50	-530.70	-552.30
CAediting_423126	ENST00000509598.4	chr5_115838904_-	-533.90	-530.70	-552.30
CAediting_423127	ENST00000509598.4	chr5_115838942_-	-531.00	-530.70	-552.30
CAediting_423128	ENST00000509598.4	chr5_115838956_-	-530.80	-530.70	-552.30
CAediting_423129	ENST00000509598.4	chr5_115838959_-	-534.10	-530.70	-552.30
CAediting_423130	ENST00000509598.4	chr5_115838988_-	-530.50	-530.70	-552.30
CAediting_423131	ENST00000509598.4	chr5_115838991_-	-531.40	-530.70	-552.30
CAediting_423132	ENST00000509598.4	chr5_115839001_-	-531.10	-530.70	-552.30
CAediting_423133	ENST00000509598.4	chr5_115839006_-	-529.80	-530.70	-552.30
CAediting_423134	ENST00000509598.4	chr5_115839011_-	-535.00	-530.70	-552.30
CAediting_423135	ENST00000509598.4	chr5_115839015_-	-530.70	-530.70	-552.30
CAediting_423136	ENST00000509598.4	chr5_115839023_-	-530.00	-530.70	-552.30
CAediting_423137	ENST00000509598.4	chr5_115839040_-	-531.70	-530.70	-552.30
CAediting_423138	ENST00000509598.4	chr5_115839041_-	-532.40	-530.70	-552.30
CAediting_423139	ENST00000509598.4	chr5_115839060_-	-530.70	-530.70	-552.30
CAediting_423140	ENST00000509598.4	chr5_115839077_-	-531.40	-530.70	-552.30
CAediting_423141	ENST00000509598.4	chr5_115839109_-	-530.00	-530.70	-552.30
CAediting_423156	ENST00000513167.1	chr5_115840501_-	-213.40	-210.50	-226.20
CAediting_423157	ENST00000513167.1	chr5_115840502_-	-209.80	-210.50	-226.20
CAediting_423158	ENST00000513167.1	chr5_115840524_-	-215.40	-210.50	-226.20
CAediting_423159	ENST00000513167.1	chr5_115840548_-	-216.70	-210.50	-226.20
CAediting_423160	ENST00000513167.1	chr5_115840554_-	-213.20	-210.50	-226.20
CAediting_423161	ENST00000513167.1	chr5_115840562_-	-210.50	-210.50	-226.20
CAediting_423162	ENST00000513167.1	chr5_115840565_-	-212.90	-210.50	-226.20
CAediting_423163	ENST00000513167.1	chr5_115840570_-	-212.60	-210.50	-226.20
CAediting_423164	ENST00000513167.1	chr5_115840571_-	-212.50	-210.50	-226.20
CAediting_423160	ENST00000514775.1	chr5_115840554_-	-154.90	-152.10	-160.00
CAediting_423161	ENST00000514775.1	chr5_115840562_-	-153.60	-152.10	-160.00
CAediting_423162	ENST00000514775.1	chr5_115840565_-	-153.10	-152.10	-160.00
CAediting_423163	ENST00000514775.1	chr5_115840570_-	-152.20	-152.10	-160.00
CAediting_423164	ENST00000514775.1	chr5_115840571_-	-154.20	-152.10	-160.00

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Relation with ADAR for ATG12

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_423083	chr5_115829866_-	0.0134910883094127	0.189720018085862	.	.	0.00710238687351749	0.206374943493804
LUAD	CAediting_423083	chr5_115829866_-	7.73885986160392e-05	0.445776330541796	.	.	.	.
LUSC	CAediting_423083	chr5_115829866_-	0.0308618028547609	0.272280331857761	.	.	.	.
STAD	CAediting_423083	chr5_115829866_-	0.0416129404954227	0.17496802012573	.	.	.	.
BLCA	CAediting_423091	chr5_115829935_-	2.29089911342658e-07	0.305356176227641	.	.	0.0492684296064488	0.118475559274556
LGG	CAediting_423091	chr5_115829935_-	1.86236538597565e-09	0.267471274050427	.	.	.	.
BRCA	CAediting_423091	chr5_115829935_-	2.0200259026144e-32	0.361344940011897	.	.	.	.
LIHC	CAediting_423091	chr5_115829935_-	0.000377041805039904	0.195181702526857	.	.	.	.
CESC	CAediting_423091	chr5_115829935_-	1.72987944349358e-05	0.264049370995085	.	.	.	.
LUAD	CAediting_423091	chr5_115829935_-	5.60681734065627e-09	0.277933089376654	.	.	.	.
COAD	CAediting_423091	chr5_115829935_-	1.80644299810273e-05	0.269126068135909	.	.	.	.
LUSC	CAediting_423091	chr5_115829935_-	7.7093473309086e-06	0.225754709475878	.	.	.	.
GBM	CAediting_423091	chr5_115829935_-	0.000184635115314776	0.289694567502446	.	.	.	.
PRAD	CAediting_423091	chr5_115829935_-	2.88917563835545e-08	0.272969831699602	.	.	.	.
HNSC	CAediting_423091	chr5_115829935_-	0.00693125488712027	0.133162077247427	3.61842947795924e-05	0.202496041840753	.	.
STAD	CAediting_423091	chr5_115829935_-	0.00791072271147386	0.172864543972475	.	.	.	.
THCA	CAediting_423091	chr5_115829935_-	7.09966923887491e-06	0.216141488241745	.	.	.	.
KIRC	CAediting_423091	chr5_115829935_-	0.00127092589535266	0.146519278276483	.	.	.	.
UCEC	CAediting_423091	chr5_115829935_-	5.7281794612143e-07	0.347305127883012	.	.	.	.
ACC	CAediting_423091	chr5_115829935_-	4.18491664948508e-07	0.599409543043629	.	.	.	.
OV	CAediting_423091	chr5_115829935_-	4.47874765166389e-05	0.238466766805062	.	.	.	.
PAAD	CAediting_423091	chr5_115829935_-	0.009350390509927	0.203005179951906	.	.	.	.
PCPG	CAediting_423091	chr5_115829935_-	0.0020410970328912	0.245125410685659	.	.	.	.
SKCM	CAediting_423091	chr5_115829935_-	5.65813368279724e-09	0.323801406246641	.	.	.	.
UCS	CAediting_423091	chr5_115829935_-	5.27571115544921e-05	0.534823700692077	.	.	.	.
MESO	CAediting_423091	chr5_115829935_-	0.00875284615755971	0.293111904624091	.	.	.	.
READ	CAediting_423091	chr5_115829935_-	0.00563971252695532	0.308702424449167	.	.	.	.
SARC	CAediting_423091	chr5_115829935_-	1.2230252438506e-05	0.279296803322182	.	.	.	.
THYM	CAediting_423091	chr5_115829935_-	8.43464802101602e-05	0.394245916534944	.	.	.	.
BLCA	CAediting_423093	chr5_115830034_-	0.00394646800413751	0.350182332264302	.	.	.	.
LGG	CAediting_423093	chr5_115830034_-	0.00178131450046062	0.372090303333976	.	.	.	.
BRCA	CAediting_423093	chr5_115830034_-	7.32347264961461e-08	0.266772023051758	.	.	.	.
LIHC	CAediting_423093	chr5_115830034_-	4.54820383502577e-05	0.349659323599677	.	.	.	.
CESC	CAediting_423093	chr5_115830034_-	0.00225737937547706	0.354372875331978	.	.	.	.
LUAD	CAediting_423093	chr5_115830034_-	0.0138477359992724	0.212968233961922	.	.	.	.
GBM	CAediting_423093	chr5_115830034_-	0.00467411171164321	0.323238974812208	.	.	.	.
OV	CAediting_423093	chr5_115830034_-	0.000769332030099062	0.210967015525354	.	.	.	.
SARC	CAediting_423093	chr5_115830034_-	1.0943604623255e-05	0.46725756207995	.	.	.	.
BRCA	CAediting_423101	chr5_115830603_-	1.67342826525155e-07	0.528683275182581	0.0183322602797906	0.253892205234908	.	.
BRCA	CAediting_423105	chr5_115830653_-	.	.	.	.	0.0145495248366683	0.188229682066638

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Relation with cancer stages for ATG12

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
COAD	pathologic_stage	CAediting_423091	chr5_115829935_-	0.0354102351806285	-0.136152418873867
KIRC	pathologic_stage	CAediting_423091	chr5_115829935_-	1.45165184586138e-07	0.237446719301205
LUAD	pathologic_stage	CAediting_423091	chr5_115829935_-	0.000872801370448526	0.162021630379321
LUAD	pathologic_stage	CAediting_423093	chr5_115830034_-	0.0458955041161478	0.175425795521414
THCA	pathologic_stage	CAediting_423091	chr5_115829935_-	0.0375936581289138	0.101618886990092
THCA	pathologic_stage	CAediting_423093	chr5_115830034_-	0.0482456854321948	0.267602858803694

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Relation with survival for ATG12

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LUSC	CAediting_423093	chr5_115830034_-	0.016481436856625	0.0217078	0.0232376

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RelatedDrugs for ATG12

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ATG12

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene