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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CLDN12 (CAeditome ID:9069)

Gene summary for CLDN12

check button Gene summary
Gene informationGene symbol

CLDN12

Gene ID

9069

Gene nameclaudin 12
Synonyms-
Cytomap

7q21.13

Type of geneprotein-coding
Descriptionclaudin-12
Modification date20210518
UniProtAcc

P56749

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CLDN12

GO:0005886

Claudin-12

20375010


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RNA A-to-I events for CLDN12

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000157224.14
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_571942(90385777, +), CAediting_571943(90385781, +), CAediting_571944(90385799, +), CAediting_571945(90385800, +), CAediting_571946(90385805, +), CAediting_571947(90385808, +), CAediting_571948(90385823, +), CAediting_571949(90385826, +), CAediting_571950(90385831, +), CAediting_571951(90385841, +), CAediting_571952(90385846, +), CAediting_571953(90385854, +), CAediting_571954(90385855, +), CAediting_571955(90385860, +), CAediting_571956(90385869, +), CAediting_571957(90385870, +), CAediting_571958(90385872, +), CAediting_571959(90385879, +), CAediting_571960(90385880, +), CAediting_571961(90385891, +), CAediting_571962(90385894, +), CAediting_571963(90385895, +), CAediting_571964(90385896, +), CAediting_571965(90385898, +), CAediting_571966(90385902, +), CAediting_571967(90385903, +), CAediting_571968(90385904, +), CAediting_571969(90385905, +), CAediting_571970(90385906, +), CAediting_571971(90385907, +), CAediting_571972(90385910, +), CAediting_571973(90385918, +), CAediting_571974(90385920, +), CAediting_571975(90385939, +), CAediting_571976(90385945, +), CAediting_571977(90385953, +), CAediting_571978(90385956, +), CAediting_571979(90385962, +), CAediting_571980(90385966, +), CAediting_571981(90385969, +), CAediting_571982(90385972, +), CAediting_571983(90385980, +), CAediting_571984(90385981, +), CAediting_571985(90385999, +), CAediting_571986(90386002, +), CAediting_571987(90386005, +), CAediting_571988(90386006, +), CAediting_571989(90386021, +), CAediting_571990(90386049, +), CAediting_571991(90386056, +), CAediting_571992(90386571, +), CAediting_571993(90386573, +), CAediting_571994(90386593, +), CAediting_571995(90386594, +), CAediting_571996(90386599, +), CAediting_571997(90386615, +), CAediting_571998(90386616, +), CAediting_571999(90387058, +), CAediting_572000(90387062, +), CAediting_572001(90387082, +), CAediting_572002(90387108, +), CAediting_572003(90387112, +), CAediting_572004(90387127, +), CAediting_572005(90387135, +), CAediting_572006(90387150, +), CAediting_572007(90387151, +), CAediting_572008(90387153, +), CAediting_572009(90387162, +), CAediting_572010(90387166, +), CAediting_572011(90387172, +), CAediting_572012(90387175, +), CAediting_572013(90387176, +), CAediting_572014(90387180, +), CAediting_572015(90387182, +), CAediting_572016(90387183, +), CAediting_572017(90387184, +), CAediting_572018(90387185, +), CAediting_572019(90387186, +), CAediting_572020(90387189, +), CAediting_572021(90387197, +), CAediting_572022(90387215, +), CAediting_572023(90387216, +), CAediting_572024(90387221, +), CAediting_572025(90387232, +), CAediting_572026(90387242, +), CAediting_572027(90387248, +), CAediting_572028(90387256, +), CAediting_572029(90387257, +), CAediting_572030(90387288, +), CAediting_572031(90389359, +), CAediting_572032(90389413, +), CAediting_572033(90389437, +), CAediting_572034(90389442, +), CAediting_572035(90389448, +), CAediting_572036(90389451, +), CAediting_572037(90389461, +), CAediting_572038(90389466, +), CAediting_572039(90389486, +), CAediting_572040(90389487, +), CAediting_572041(90389490, +), CAediting_572042(90389491, +), CAediting_572043(90389504, +), CAediting_572044(90389513, +), CAediting_572045(90389516, +), CAediting_572046(90389528, +), CAediting_572047(90389548, +), CAediting_572048(90389552, +), CAediting_572049(90389553, +), CAediting_572050(90389561, +), CAediting_572051(90389567, +), CAediting_572052(90389570, +), CAediting_572053(90389572, +), CAediting_572054(90389574, +), CAediting_572055(90389584, +), CAediting_572056(90389621, +), CAediting_572057(90389817, +), CAediting_572058(90389819, +), CAediting_572059(90389823, +), CAediting_572060(90389843, +), CAediting_572061(90389849, +), CAediting_572062(90389855, +), CAediting_572063(90389857, +), CAediting_572064(90389873, +), CAediting_572065(90389887, +), CAediting_572066(90389888, +), CAediting_572067(90389892, +), CAediting_572068(90389905, +), CAediting_572069(90389913, +), CAediting_572070(90389914, +), CAediting_572071(90389917, +), CAediting_572072(90389921, +), CAediting_572073(90389924, +), CAediting_572074(90389929, +), CAediting_572075(90389930, +), CAediting_572076(90389940, +), CAediting_572077(90389943, +), CAediting_572078(90389945, +), CAediting_572079(90389954, +), CAediting_572080(90389967, +), CAediting_572081(90389974, +), CAediting_572082(90389976, +), CAediting_572083(90389980, +), CAediting_572084(90389988, +), CAediting_572085(90390000, +), CAediting_572086(90390002, +), CAediting_572087(90390012, +), CAediting_572088(90390013, +), CAediting_572089(90390019, +), CAediting_572090(90390025, +), CAediting_572091(90390029, +), CAediting_572092(90390030, +), CAediting_572093(90390038, +), CAediting_572094(90390051, +), CAediting_572095(90390052, +), CAediting_572096(90390053, +), CAediting_572097(90390059, +), CAediting_572098(90390067, +), CAediting_572099(90390082, +), CAediting_572100(90390088, +), CAediting_572101(90398785, +), CAediting_572102(90398807, +), CAediting_572103(90405844, +), CAediting_572104(90405845, +), CAediting_572105(90405874, +), CAediting_572106(90405918, +), CAediting_572107(90405974, +), CAediting_572108(90405980, +), CAediting_572109(90405982, +), CAediting_572110(90405988, +), CAediting_572111(90406000, +), CAediting_572112(90406048, +), CAediting_572113(90407078, +), CAediting_572114(90407097, +), CAediting_572115(90407102, +), CAediting_572116(90407114, +), CAediting_572117(90407120, +), CAediting_572118(90407159, +), CAediting_572119(90407160, +), CAediting_572120(90407172, +), CAediting_572121(90408239, +), CAediting_572122(90408248, +), CAediting_572123(90408264, +), CAediting_572124(90408288, +), CAediting_572125(90408301, +), CAediting_572126(90408321, +), CAediting_572127(90408324, +), CAediting_572128(90408332, +), CAediting_572129(90408338, +), CAediting_572130(90408351, +), CAediting_572131(90408352, +), CAediting_572132(90408376, +), CAediting_572133(90408383, +), CAediting_572134(90408388, +), CAediting_572135(90408392, +), CAediting_572136(90408396, +), CAediting_572137(90408409, +), CAediting_572138(90408962, +), CAediting_572139(90408971, +), CAediting_572140(90408983, +), CAediting_572141(90408984, +), CAediting_572142(90408996, +), CAediting_572143(90409042, +), CAediting_572144(90409240, +), CAediting_572145(90409244, +), CAediting_572146(90409273, +), CAediting_572147(90409301, +), CAediting_572148(90409302, +), CAediting_572149(90409322, +), CAediting_572150(90409326, +), CAediting_572151(90409351, +), CAediting_572152(90409361, +), CAediting_572153(90409363, +), CAediting_572154(90409367, +), CAediting_572155(90409387, +), CAediting_572156(90409396, +), CAediting_572157(90409402, +), CAediting_572158(90409407, +), CAediting_572159(90409428, +), CAediting_572160(90409442, +), CAediting_572161(90409443, +), CAediting_572162(90409451, +), CAediting_572163(90409457, +), CAediting_572164(90409465, +), CAediting_572165(90409484, +), CAediting_572166(90409498, +), CAediting_572167(90409505, +), CAediting_572168(90410603, +), CAediting_572169(90410604, +), CAediting_572170(90410608, +), CAediting_572171(90410612, +), CAediting_572172(90410627, +), CAediting_572173(90410636, +), CAediting_572174(90410735, +), CAediting_572175(90410741, +), CAediting_572176(90410782, +), CAediting_572177(90410787, +), CAediting_572178(90410790, +), CAediting_572179(90410801, +), CAediting_572180(90410806, +), CAediting_572181(90410813, +), CAediting_572182(90410816, +), CAediting_572183(90410818, +), CAediting_572184(90410819, +), CAediting_572185(90410820, +), CAediting_572186(90410832, +), CAediting_572187(90410834, +), CAediting_572188(90410835, +), CAediting_572189(90410836, +), CAediting_572190(90410837, +), CAediting_572191(90410838, +), CAediting_572192(90410841, +), CAediting_572193(90410844, +), CAediting_572194(90410845, +), CAediting_572195(90410846, +), CAediting_572196(90410847, +), CAediting_572197(90410850, +), CAediting_572198(90410856, +), CAediting_572199(90410860, +), CAediting_572200(90410864, +), CAediting_572201(90410874, +), CAediting_572202(90410882, +), CAediting_572203(90410890, +), CAediting_572204(90410893, +), CAediting_572205(90410906, +), CAediting_572206(90410917, +), CAediting_572207(90410925, +), CAediting_572208(90410962, +), CAediting_572209(90410981, +), CAediting_572210(90411005, +), CAediting_572211(90411008, +), CAediting_572212(90411009, +), CAediting_572213(90411015, +), CAediting_572214(90428924, +), CAediting_572215(90429018, +), CAediting_572216(90429022, +), CAediting_572217(90429032, +), CAediting_572218(90429075, +), CAediting_572219(90429085, +), CAediting_572220(90466493, +), CAediting_572221(90466494, +), CAediting_572222(90466502, +), CAediting_572223(90466934, +), CAediting_572224(90466941, +), CAediting_572225(90466953, +), CAediting_572226(90467017, +), CAediting_572227(90467060, +), CAediting_572228(90467152, +), CAediting_572229(90467863, +), CAediting_572230(90467889, +), CAediting_572231(90467890, +), CAediting_572232(90467893, +), CAediting_572233(90467896, +), CAediting_572234(90497232, +),

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RNA editing positional annotations for CLDN12 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_571942chr7_90385777_+UTR3
CAediting_571943chr7_90385781_+UTR3
CAediting_571944chr7_90385799_+UTR3
CAediting_571945chr7_90385800_+UTR3
CAediting_571946chr7_90385805_+UTR3
CAediting_571947chr7_90385808_+UTR3
CAediting_571948chr7_90385823_+UTR3
CAediting_571949chr7_90385826_+UTR3
CAediting_571950chr7_90385831_+UTR3
CAediting_571951chr7_90385841_+UTR3
CAediting_571952chr7_90385846_+UTR3
CAediting_571953chr7_90385854_+UTR3
CAediting_571954chr7_90385855_+UTR3
CAediting_571955chr7_90385860_+UTR3
CAediting_571956chr7_90385869_+UTR3
CAediting_571957chr7_90385870_+UTR3
CAediting_571958chr7_90385872_+UTR3
CAediting_571959chr7_90385879_+UTR3
CAediting_571960chr7_90385880_+UTR3
CAediting_571961chr7_90385891_+UTR3
CAediting_571962chr7_90385894_+UTR3
CAediting_571963chr7_90385895_+UTR3
CAediting_571964chr7_90385896_+UTR3
CAediting_571965chr7_90385898_+UTR3
CAediting_571966chr7_90385902_+UTR3
CAediting_571967chr7_90385903_+UTR3
CAediting_571968chr7_90385904_+UTR3
CAediting_571969chr7_90385905_+UTR3
CAediting_571970chr7_90385906_+UTR3
CAediting_571971chr7_90385907_+UTR3
CAediting_571972chr7_90385910_+UTR3
CAediting_571973chr7_90385918_+UTR3
CAediting_571974chr7_90385920_+UTR3
CAediting_571975chr7_90385939_+UTR3
CAediting_571976chr7_90385945_+UTR3
CAediting_571977chr7_90385953_+UTR3
CAediting_571978chr7_90385956_+UTR3
CAediting_571979chr7_90385962_+UTR3
CAediting_571980chr7_90385966_+UTR3
CAediting_571981chr7_90385969_+UTR3
CAediting_571982chr7_90385972_+UTR3
CAediting_571983chr7_90385980_+UTR3
CAediting_571984chr7_90385981_+UTR3
CAediting_571985chr7_90385999_+UTR3
CAediting_571986chr7_90386002_+UTR3
CAediting_571987chr7_90386005_+UTR3
CAediting_571988chr7_90386006_+UTR3
CAediting_571989chr7_90386021_+UTR3
CAediting_571990chr7_90386049_+UTR3
CAediting_571991chr7_90386056_+UTR3
CAediting_571992chr7_90386571_+UTR3
CAediting_571993chr7_90386573_+UTR3
CAediting_571994chr7_90386593_+UTR3
CAediting_571995chr7_90386594_+UTR3
CAediting_571996chr7_90386599_+UTR3
CAediting_571997chr7_90386615_+UTR3
CAediting_571998chr7_90386616_+UTR3
CAediting_571999chr7_90387058_+UTR3
CAediting_572000chr7_90387062_+UTR3
CAediting_572001chr7_90387082_+UTR3
CAediting_572002chr7_90387108_+UTR3
CAediting_572003chr7_90387112_+UTR3
CAediting_572004chr7_90387127_+UTR3
CAediting_572005chr7_90387135_+UTR3
CAediting_572006chr7_90387150_+UTR3
CAediting_572007chr7_90387151_+UTR3
CAediting_572008chr7_90387153_+UTR3
CAediting_572009chr7_90387162_+UTR3
CAediting_572010chr7_90387166_+UTR3
CAediting_572011chr7_90387172_+UTR3
CAediting_572012chr7_90387175_+UTR3
CAediting_572013chr7_90387176_+UTR3
CAediting_572014chr7_90387180_+UTR3
CAediting_572015chr7_90387182_+UTR3
CAediting_572016chr7_90387183_+UTR3
CAediting_572017chr7_90387184_+UTR3
CAediting_572018chr7_90387185_+UTR3
CAediting_572019chr7_90387186_+UTR3
CAediting_572020chr7_90387189_+UTR3
CAediting_572021chr7_90387197_+UTR3
CAediting_572022chr7_90387215_+UTR3
CAediting_572023chr7_90387216_+UTR3
CAediting_572024chr7_90387221_+UTR3
CAediting_572025chr7_90387232_+UTR3
CAediting_572026chr7_90387242_+UTR3
CAediting_572027chr7_90387248_+UTR3
CAediting_572028chr7_90387256_+UTR3
CAediting_572029chr7_90387257_+UTR3
CAediting_572030chr7_90387288_+UTR3
CAediting_572031chr7_90389359_+UTR3
CAediting_572032chr7_90389413_+UTR3
CAediting_572033chr7_90389437_+UTR3
CAediting_572034chr7_90389442_+UTR3
CAediting_572035chr7_90389448_+UTR3
CAediting_572036chr7_90389451_+UTR3
CAediting_572037chr7_90389461_+UTR3
CAediting_572038chr7_90389466_+UTR3
CAediting_572039chr7_90389486_+UTR3
CAediting_572040chr7_90389487_+UTR3
CAediting_572041chr7_90389490_+UTR3
CAediting_572042chr7_90389491_+UTR3
CAediting_572043chr7_90389504_+UTR3
CAediting_572044chr7_90389513_+UTR3
CAediting_572045chr7_90389516_+UTR3
CAediting_572046chr7_90389528_+UTR3
CAediting_572047chr7_90389548_+UTR3
CAediting_572048chr7_90389552_+UTR3
CAediting_572049chr7_90389553_+UTR3
CAediting_572050chr7_90389561_+UTR3
CAediting_572051chr7_90389567_+UTR3
CAediting_572052chr7_90389570_+UTR3
CAediting_572053chr7_90389572_+UTR3
CAediting_572054chr7_90389574_+UTR3
CAediting_572055chr7_90389584_+UTR3
CAediting_572056chr7_90389621_+UTR3
CAediting_572057chr7_90389817_+UTR3
CAediting_572058chr7_90389819_+UTR3
CAediting_572059chr7_90389823_+UTR3
CAediting_572060chr7_90389843_+UTR3
CAediting_572061chr7_90389849_+UTR3
CAediting_572062chr7_90389855_+UTR3
CAediting_572063chr7_90389857_+UTR3
CAediting_572064chr7_90389873_+UTR3
CAediting_572065chr7_90389887_+UTR3
CAediting_572066chr7_90389888_+UTR3
CAediting_572067chr7_90389892_+UTR3
CAediting_572068chr7_90389905_+UTR3
CAediting_572069chr7_90389913_+UTR3
CAediting_572070chr7_90389914_+UTR3
CAediting_572071chr7_90389917_+UTR3
CAediting_572072chr7_90389921_+UTR3
CAediting_572073chr7_90389924_+UTR3
CAediting_572074chr7_90389929_+UTR3
CAediting_572075chr7_90389930_+UTR3
CAediting_572076chr7_90389940_+UTR3
CAediting_572077chr7_90389943_+UTR3
CAediting_572078chr7_90389945_+UTR3
CAediting_572079chr7_90389954_+UTR3
CAediting_572080chr7_90389967_+UTR3
CAediting_572081chr7_90389974_+UTR3
CAediting_572082chr7_90389976_+UTR3
CAediting_572083chr7_90389980_+UTR3
CAediting_572084chr7_90389988_+UTR3
CAediting_572085chr7_90390000_+UTR3
CAediting_572086chr7_90390002_+UTR3
CAediting_572087chr7_90390012_+UTR3
CAediting_572088chr7_90390013_+UTR3
CAediting_572089chr7_90390019_+UTR3
CAediting_572090chr7_90390025_+UTR3
CAediting_572091chr7_90390029_+UTR3
CAediting_572092chr7_90390030_+UTR3
CAediting_572093chr7_90390038_+UTR3
CAediting_572094chr7_90390051_+UTR3
CAediting_572095chr7_90390052_+UTR3
CAediting_572096chr7_90390053_+UTR3
CAediting_572097chr7_90390059_+UTR3
CAediting_572098chr7_90390067_+UTR3
CAediting_572099chr7_90390082_+UTR3
CAediting_572100chr7_90390088_+UTR3
CAediting_572101chr7_90398785_+intronic
CAediting_572102chr7_90398807_+intronic
CAediting_572103chr7_90405844_+ncRNA_exonic
CAediting_572104chr7_90405845_+ncRNA_exonic
CAediting_572105chr7_90405874_+ncRNA_exonic
CAediting_572106chr7_90405918_+ncRNA_exonic
CAediting_572107chr7_90405974_+ncRNA_exonic
CAediting_572108chr7_90405980_+ncRNA_exonic
CAediting_572109chr7_90405982_+ncRNA_exonic
CAediting_572110chr7_90405988_+ncRNA_exonic
CAediting_572111chr7_90406000_+ncRNA_exonic
CAediting_572112chr7_90406048_+ncRNA_exonic
CAediting_572113chr7_90407078_+ncRNA_intronic
CAediting_572114chr7_90407097_+ncRNA_intronic
CAediting_572115chr7_90407102_+ncRNA_intronic
CAediting_572116chr7_90407114_+ncRNA_intronic
CAediting_572117chr7_90407120_+ncRNA_intronic
CAediting_572118chr7_90407159_+ncRNA_intronic
CAediting_572119chr7_90407160_+ncRNA_intronic
CAediting_572120chr7_90407172_+ncRNA_intronic
CAediting_572121chr7_90408239_+ncRNA_intronic
CAediting_572122chr7_90408248_+ncRNA_intronic
CAediting_572123chr7_90408264_+ncRNA_intronic
CAediting_572124chr7_90408288_+ncRNA_intronic
CAediting_572125chr7_90408301_+ncRNA_intronic
CAediting_572126chr7_90408321_+ncRNA_intronic
CAediting_572127chr7_90408324_+ncRNA_intronic
CAediting_572128chr7_90408332_+ncRNA_intronic
CAediting_572129chr7_90408338_+ncRNA_intronic
CAediting_572130chr7_90408351_+ncRNA_intronic
CAediting_572131chr7_90408352_+ncRNA_intronic
CAediting_572132chr7_90408376_+ncRNA_intronic
CAediting_572133chr7_90408383_+ncRNA_intronic
CAediting_572134chr7_90408388_+ncRNA_intronic
CAediting_572135chr7_90408392_+ncRNA_intronic
CAediting_572136chr7_90408396_+ncRNA_intronic
CAediting_572137chr7_90408409_+ncRNA_intronic
CAediting_572138chr7_90408962_+ncRNA_exonic
CAediting_572139chr7_90408971_+ncRNA_exonic
CAediting_572140chr7_90408983_+ncRNA_exonic
CAediting_572141chr7_90408984_+ncRNA_exonic
CAediting_572142chr7_90408996_+ncRNA_exonic
CAediting_572143chr7_90409042_+ncRNA_exonic
CAediting_572144chr7_90409240_+ncRNA_intronic
CAediting_572145chr7_90409244_+ncRNA_intronic
CAediting_572146chr7_90409273_+ncRNA_intronic
CAediting_572147chr7_90409301_+ncRNA_intronic
CAediting_572148chr7_90409302_+ncRNA_intronic
CAediting_572149chr7_90409322_+ncRNA_intronic
CAediting_572150chr7_90409326_+ncRNA_intronic
CAediting_572151chr7_90409351_+ncRNA_intronic
CAediting_572152chr7_90409361_+ncRNA_intronic
CAediting_572153chr7_90409363_+ncRNA_intronic
CAediting_572154chr7_90409367_+ncRNA_intronic
CAediting_572155chr7_90409387_+ncRNA_intronic
CAediting_572156chr7_90409396_+ncRNA_intronic
CAediting_572157chr7_90409402_+ncRNA_intronic
CAediting_572158chr7_90409407_+ncRNA_intronic
CAediting_572159chr7_90409428_+ncRNA_intronic
CAediting_572160chr7_90409442_+ncRNA_intronic
CAediting_572161chr7_90409443_+ncRNA_intronic
CAediting_572162chr7_90409451_+ncRNA_intronic
CAediting_572163chr7_90409457_+ncRNA_intronic
CAediting_572164chr7_90409465_+ncRNA_intronic
CAediting_572165chr7_90409484_+ncRNA_intronic
CAediting_572166chr7_90409498_+ncRNA_intronic
CAediting_572167chr7_90409505_+ncRNA_intronic
CAediting_572168chr7_90410603_+ncRNA_intronic
CAediting_572169chr7_90410604_+ncRNA_intronic
CAediting_572170chr7_90410608_+ncRNA_intronic
CAediting_572171chr7_90410612_+ncRNA_intronic
CAediting_572172chr7_90410627_+ncRNA_intronic
CAediting_572173chr7_90410636_+ncRNA_intronic
CAediting_572174chr7_90410735_+ncRNA_intronic
CAediting_572175chr7_90410741_+ncRNA_intronic
CAediting_572176chr7_90410782_+ncRNA_intronic
CAediting_572177chr7_90410787_+ncRNA_intronic
CAediting_572178chr7_90410790_+ncRNA_intronic
CAediting_572179chr7_90410801_+ncRNA_intronic
CAediting_572180chr7_90410806_+ncRNA_intronic
CAediting_572181chr7_90410813_+ncRNA_intronic
CAediting_572182chr7_90410816_+ncRNA_intronic
CAediting_572183chr7_90410818_+ncRNA_intronic
CAediting_572184chr7_90410819_+ncRNA_intronic
CAediting_572185chr7_90410820_+ncRNA_intronic
CAediting_572186chr7_90410832_+ncRNA_intronic
CAediting_572187chr7_90410834_+ncRNA_intronic
CAediting_572188chr7_90410835_+ncRNA_intronic
CAediting_572189chr7_90410836_+ncRNA_intronic
CAediting_572190chr7_90410837_+ncRNA_intronic
CAediting_572191chr7_90410838_+ncRNA_intronic
CAediting_572192chr7_90410841_+ncRNA_intronic
CAediting_572193chr7_90410844_+ncRNA_intronic
CAediting_572194chr7_90410845_+ncRNA_intronic
CAediting_572195chr7_90410846_+ncRNA_intronic
CAediting_572196chr7_90410847_+ncRNA_intronic
CAediting_572197chr7_90410850_+ncRNA_intronic
CAediting_572198chr7_90410856_+ncRNA_intronic
CAediting_572199chr7_90410860_+ncRNA_intronic
CAediting_572200chr7_90410864_+ncRNA_intronic
CAediting_572201chr7_90410874_+ncRNA_intronic
CAediting_572202chr7_90410882_+ncRNA_intronic
CAediting_572203chr7_90410890_+ncRNA_intronic
CAediting_572204chr7_90410893_+ncRNA_intronic
CAediting_572205chr7_90410906_+ncRNA_intronic
CAediting_572206chr7_90410917_+ncRNA_intronic
CAediting_572207chr7_90410925_+ncRNA_intronic
CAediting_572208chr7_90410962_+ncRNA_intronic
CAediting_572209chr7_90410981_+ncRNA_intronic
CAediting_572210chr7_90411005_+ncRNA_intronic
CAediting_572211chr7_90411008_+ncRNA_intronic
CAediting_572212chr7_90411009_+ncRNA_intronic
CAediting_572213chr7_90411015_+ncRNA_intronic
CAediting_572214chr7_90428924_+ncRNA_intronic
CAediting_572215chr7_90429018_+ncRNA_intronic
CAediting_572216chr7_90429022_+ncRNA_intronic
CAediting_572217chr7_90429032_+ncRNA_intronic
CAediting_572218chr7_90429075_+ncRNA_intronic
CAediting_572219chr7_90429085_+ncRNA_intronic
CAediting_572220chr7_90466493_+ncRNA_exonic
CAediting_572221chr7_90466494_+ncRNA_exonic
CAediting_572222chr7_90466502_+ncRNA_exonic
CAediting_572223chr7_90466934_+ncRNA_intronic
CAediting_572224chr7_90466941_+ncRNA_intronic
CAediting_572225chr7_90466953_+ncRNA_intronic
CAediting_572226chr7_90467017_+ncRNA_intronic
CAediting_572227chr7_90467060_+ncRNA_intronic
CAediting_572228chr7_90467152_+ncRNA_intronic
CAediting_572229chr7_90467863_+ncRNA_intronic
CAediting_572230chr7_90467889_+ncRNA_intronic
CAediting_572231chr7_90467890_+ncRNA_intronic
CAediting_572232chr7_90467893_+ncRNA_intronic
CAediting_572233chr7_90467896_+ncRNA_intronic
CAediting_572234chr7_90497232_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_571942chr7_90385777_+SINEAluAluSz
CAediting_571943chr7_90385781_+SINEAluAluSz
CAediting_571944chr7_90385799_+SINEAluAluSz
CAediting_571945chr7_90385800_+SINEAluAluSz
CAediting_571946chr7_90385805_+SINEAluAluSz
CAediting_571947chr7_90385808_+SINEAluAluSz
CAediting_571948chr7_90385823_+SINEAluAluSz
CAediting_571949chr7_90385826_+SINEAluAluSz
CAediting_571950chr7_90385831_+SINEAluAluSz
CAediting_571951chr7_90385841_+SINEAluAluSz
CAediting_571952chr7_90385846_+SINEAluAluSz
CAediting_571953chr7_90385854_+SINEAluAluSz
CAediting_571954chr7_90385855_+SINEAluAluSz
CAediting_571955chr7_90385860_+SINEAluAluSz
CAediting_571956chr7_90385869_+SINEAluAluSz
CAediting_571957chr7_90385870_+SINEAluAluSz
CAediting_571958chr7_90385872_+SINEAluAluSz
CAediting_571959chr7_90385879_+SINEAluAluSz
CAediting_571960chr7_90385880_+SINEAluAluSz
CAediting_571961chr7_90385891_+SINEAluAluSz
CAediting_571962chr7_90385894_+SINEAluAluSz
CAediting_571963chr7_90385895_+SINEAluAluSz
CAediting_571964chr7_90385896_+SINEAluAluSz
CAediting_571965chr7_90385898_+SINEAluAluSz
CAediting_571966chr7_90385902_+SINEAluAluSz
CAediting_571967chr7_90385903_+SINEAluAluSz
CAediting_571968chr7_90385904_+SINEAluAluSz
CAediting_571969chr7_90385905_+SINEAluAluSz
CAediting_571970chr7_90385906_+SINEAluAluSz
CAediting_571971chr7_90385907_+SINEAluAluSz
CAediting_571972chr7_90385910_+SINEAluAluSz
CAediting_571973chr7_90385918_+SINEAluAluSz
CAediting_571974chr7_90385920_+SINEAluAluSz
CAediting_571975chr7_90385939_+SINEAluAluSz
CAediting_571976chr7_90385945_+SINEAluAluSz
CAediting_571977chr7_90385953_+SINEAluAluSz
CAediting_571978chr7_90385956_+SINEAluAluSz
CAediting_571979chr7_90385962_+SINEAluAluSz
CAediting_571980chr7_90385966_+SINEAluAluSz
CAediting_571981chr7_90385969_+SINEAluAluSz
CAediting_571982chr7_90385972_+SINEAluAluSz
CAediting_571983chr7_90385980_+SINEAluAluSz
CAediting_571984chr7_90385981_+SINEAluAluSz
CAediting_571985chr7_90385999_+SINEAluAluSz
CAediting_571986chr7_90386002_+SINEAluAluSz
CAediting_571987chr7_90386005_+SINEAluAluSz
CAediting_571988chr7_90386006_+SINEAluAluSz
CAediting_571989chr7_90386021_+SINEAluAluSz
CAediting_571990chr7_90386049_+SINEAluAluSz
CAediting_571991chr7_90386056_+SINEAluAluSz
CAediting_571992chr7_90386571_+SINEAluFLAM_C
CAediting_571993chr7_90386573_+SINEAluFLAM_C
CAediting_571994chr7_90386593_+SINEAluFLAM_C
CAediting_571995chr7_90386594_+SINEAluFLAM_C
CAediting_571996chr7_90386599_+SINEAluFLAM_C
CAediting_571997chr7_90386615_+SINEAluFLAM_C
CAediting_571998chr7_90386616_+SINEAluFLAM_C
CAediting_571999chr7_90387058_+SINEAluAluSz
CAediting_572000chr7_90387062_+SINEAluAluSz
CAediting_572001chr7_90387082_+SINEAluAluSz
CAediting_572002chr7_90387108_+SINEAluAluSz
CAediting_572003chr7_90387112_+SINEAluAluSz
CAediting_572004chr7_90387127_+SINEAluAluSz
CAediting_572005chr7_90387135_+SINEAluAluSz
CAediting_572006chr7_90387150_+SINEAluAluSz
CAediting_572007chr7_90387151_+SINEAluAluSz
CAediting_572008chr7_90387153_+SINEAluAluSz
CAediting_572009chr7_90387162_+SINEAluAluSz
CAediting_572010chr7_90387166_+SINEAluAluSz
CAediting_572011chr7_90387172_+SINEAluAluSz
CAediting_572012chr7_90387175_+SINEAluAluSz
CAediting_572013chr7_90387176_+SINEAluAluSz
CAediting_572014chr7_90387180_+SINEAluAluSz
CAediting_572015chr7_90387182_+SINEAluAluSz
CAediting_572016chr7_90387183_+SINEAluAluSz
CAediting_572017chr7_90387184_+SINEAluAluSz
CAediting_572018chr7_90387185_+SINEAluAluSz
CAediting_572019chr7_90387186_+SINEAluAluSz
CAediting_572020chr7_90387189_+SINEAluAluSz
CAediting_572021chr7_90387197_+SINEAluAluSz
CAediting_572022chr7_90387215_+SINEAluAluSz
CAediting_572023chr7_90387216_+SINEAluAluSz
CAediting_572024chr7_90387221_+SINEAluAluSz
CAediting_572025chr7_90387232_+SINEAluAluSz
CAediting_572026chr7_90387242_+SINEAluAluSz
CAediting_572027chr7_90387248_+SINEAluAluSz
CAediting_572028chr7_90387256_+SINEAluAluSz
CAediting_572029chr7_90387257_+SINEAluAluSz
CAediting_572030chr7_90387288_+SINEAluAluSz
CAediting_572032chr7_90389413_+SINEAluAluSc5
CAediting_572033chr7_90389437_+SINEAluAluSc5
CAediting_572034chr7_90389442_+SINEAluAluSc5
CAediting_572035chr7_90389448_+SINEAluAluSc5
CAediting_572036chr7_90389451_+SINEAluAluSc5
CAediting_572037chr7_90389461_+SINEAluAluSc5
CAediting_572038chr7_90389466_+SINEAluAluSc5
CAediting_572039chr7_90389486_+SINEAluAluSc5
CAediting_572040chr7_90389487_+SINEAluAluSc5
CAediting_572041chr7_90389490_+SINEAluAluSc5
CAediting_572042chr7_90389491_+SINEAluAluSc5
CAediting_572043chr7_90389504_+SINEAluAluSc5
CAediting_572044chr7_90389513_+SINEAluAluSc5
CAediting_572045chr7_90389516_+SINEAluAluSc5
CAediting_572046chr7_90389528_+SINEAluAluSc5
CAediting_572047chr7_90389548_+SINEAluAluSc5
CAediting_572048chr7_90389552_+SINEAluAluSc5
CAediting_572049chr7_90389553_+SINEAluAluSc5
CAediting_572050chr7_90389561_+SINEAluAluSc5
CAediting_572051chr7_90389567_+SINEAluAluSc5
CAediting_572052chr7_90389570_+SINEAluAluSc5
CAediting_572053chr7_90389572_+SINEAluAluSc5
CAediting_572054chr7_90389574_+SINEAluAluSc5
CAediting_572055chr7_90389584_+SINEAluAluSc5
CAediting_572057chr7_90389817_+SINEAluAluJr4
CAediting_572058chr7_90389819_+SINEAluAluJr4
CAediting_572059chr7_90389823_+SINEAluAluJr4
CAediting_572060chr7_90389843_+SINEAluAluJr4
CAediting_572061chr7_90389849_+SINEAluAluJr4
CAediting_572062chr7_90389855_+SINEAluAluJr4
CAediting_572063chr7_90389857_+SINEAluAluJr4
CAediting_572064chr7_90389873_+SINEAluAluJr4
CAediting_572065chr7_90389887_+SINEAluAluJr4
CAediting_572066chr7_90389888_+SINEAluAluJr4
CAediting_572067chr7_90389892_+SINEAluAluJr4
CAediting_572068chr7_90389905_+SINEAluAluJr4
CAediting_572069chr7_90389913_+SINEAluAluJr4
CAediting_572070chr7_90389914_+SINEAluAluJr4
CAediting_572071chr7_90389917_+SINEAluAluJr4
CAediting_572072chr7_90389921_+SINEAluAluJr4
CAediting_572073chr7_90389924_+SINEAluAluJr4
CAediting_572074chr7_90389929_+SINEAluAluJr4
CAediting_572075chr7_90389930_+SINEAluAluJr4
CAediting_572076chr7_90389940_+SINEAluAluJr4
CAediting_572077chr7_90389943_+SINEAluAluJr4
CAediting_572078chr7_90389945_+SINEAluAluJr4
CAediting_572079chr7_90389954_+SINEAluAluJr4
CAediting_572080chr7_90389967_+SINEAluAluJr4
CAediting_572081chr7_90389974_+SINEAluAluJr4
CAediting_572082chr7_90389976_+SINEAluAluJr4
CAediting_572083chr7_90389980_+SINEAluAluJr4
CAediting_572084chr7_90389988_+SINEAluAluJr4
CAediting_572085chr7_90390000_+SINEAluAluJr4
CAediting_572086chr7_90390002_+SINEAluAluJr4
CAediting_572087chr7_90390012_+SINEAluAluJr4
CAediting_572088chr7_90390013_+SINEAluAluJr4
CAediting_572089chr7_90390019_+SINEAluAluJr4
CAediting_572090chr7_90390025_+SINEAluAluJr4
CAediting_572091chr7_90390029_+SINEAluAluJr4
CAediting_572092chr7_90390030_+SINEAluAluJr4
CAediting_572093chr7_90390038_+SINEAluAluJr4
CAediting_572094chr7_90390051_+SINEAluAluJr4
CAediting_572095chr7_90390052_+SINEAluAluJr4
CAediting_572096chr7_90390053_+SINEAluAluJr4
CAediting_572097chr7_90390059_+SINEAluAluJr4
CAediting_572098chr7_90390067_+SINEAluAluJr4
CAediting_572099chr7_90390082_+SINEAluAluJr4
CAediting_572100chr7_90390088_+SINEAluAluJr4
CAediting_572101chr7_90398785_+SINEAluAluSz
CAediting_572102chr7_90398807_+SINEAluAluSz
CAediting_572103chr7_90405844_+SINEAluAluJr
CAediting_572104chr7_90405845_+SINEAluAluJr
CAediting_572105chr7_90405874_+SINEAluAluJr
CAediting_572106chr7_90405918_+SINEAluAluJr
CAediting_572107chr7_90405974_+SINEAluAluJr
CAediting_572108chr7_90405980_+SINEAluAluJr
CAediting_572109chr7_90405982_+SINEAluAluJr
CAediting_572110chr7_90405988_+SINEAluAluJr
CAediting_572111chr7_90406000_+SINEAluAluJr
CAediting_572112chr7_90406048_+SINEAluAluJr
CAediting_572113chr7_90407078_+SINEAluAluSx4
CAediting_572114chr7_90407097_+SINEAluAluSx4
CAediting_572115chr7_90407102_+SINEAluAluSx4
CAediting_572116chr7_90407114_+SINEAluAluSx4
CAediting_572117chr7_90407120_+SINEAluAluSx4
CAediting_572118chr7_90407159_+SINEAluAluSx4
CAediting_572119chr7_90407160_+SINEAluAluSx4
CAediting_572120chr7_90407172_+SINEAluAluSx4
CAediting_572121chr7_90408239_+SINEAluAluJo
CAediting_572122chr7_90408248_+SINEAluAluJo
CAediting_572123chr7_90408264_+SINEAluAluJo
CAediting_572124chr7_90408288_+SINEAluAluJo
CAediting_572125chr7_90408301_+SINEAluAluJo
CAediting_572126chr7_90408321_+SINEAluAluJo
CAediting_572127chr7_90408324_+SINEAluAluJo
CAediting_572128chr7_90408332_+SINEAluAluJo
CAediting_572129chr7_90408338_+SINEAluAluJo
CAediting_572130chr7_90408351_+SINEAluAluJo
CAediting_572131chr7_90408352_+SINEAluAluJo
CAediting_572132chr7_90408376_+SINEAluAluJo
CAediting_572133chr7_90408383_+SINEAluAluJo
CAediting_572134chr7_90408388_+SINEAluAluJo
CAediting_572135chr7_90408392_+SINEAluAluJo
CAediting_572136chr7_90408396_+SINEAluAluJo
CAediting_572137chr7_90408409_+SINEAluAluJo
CAediting_572138chr7_90408962_+SINEAluFLAM_C
CAediting_572139chr7_90408971_+SINEAluFLAM_C
CAediting_572140chr7_90408983_+SINEAluFLAM_C
CAediting_572141chr7_90408984_+SINEAluFLAM_C
CAediting_572142chr7_90408996_+SINEAluFLAM_C
CAediting_572143chr7_90409042_+SINEAluFLAM_C
CAediting_572144chr7_90409240_+SINEAluAluSz
CAediting_572145chr7_90409244_+SINEAluAluSz
CAediting_572146chr7_90409273_+SINEAluAluSz
CAediting_572147chr7_90409301_+SINEAluAluSz
CAediting_572148chr7_90409302_+SINEAluAluSz
CAediting_572149chr7_90409322_+SINEAluAluSz
CAediting_572150chr7_90409326_+SINEAluAluSz
CAediting_572151chr7_90409351_+SINEAluAluSz
CAediting_572152chr7_90409361_+SINEAluAluSz
CAediting_572153chr7_90409363_+SINEAluAluSz
CAediting_572154chr7_90409367_+SINEAluAluSz
CAediting_572155chr7_90409387_+SINEAluAluSz
CAediting_572156chr7_90409396_+SINEAluAluSz
CAediting_572157chr7_90409402_+SINEAluAluSz
CAediting_572158chr7_90409407_+SINEAluAluSz
CAediting_572159chr7_90409428_+SINEAluAluSz
CAediting_572160chr7_90409442_+SINEAluAluSz
CAediting_572161chr7_90409443_+SINEAluAluSz
CAediting_572162chr7_90409451_+SINEAluAluSz
CAediting_572163chr7_90409457_+SINEAluAluSz
CAediting_572164chr7_90409465_+SINEAluAluSz
CAediting_572165chr7_90409484_+SINEAluAluSz
CAediting_572166chr7_90409498_+SINEAluAluSz
CAediting_572167chr7_90409505_+SINEAluAluSz
CAediting_572168chr7_90410603_+SINEAluFLAM_C
CAediting_572169chr7_90410604_+SINEAluFLAM_C
CAediting_572170chr7_90410608_+SINEAluFLAM_C
CAediting_572171chr7_90410612_+SINEAluFLAM_C
CAediting_572172chr7_90410627_+SINEAluFLAM_C
CAediting_572173chr7_90410636_+SINEAluFLAM_C
CAediting_572174chr7_90410735_+SINEAluAluJb
CAediting_572175chr7_90410741_+SINEAluAluJb
CAediting_572176chr7_90410782_+SINEAluAluJb
CAediting_572177chr7_90410787_+SINEAluAluJb
CAediting_572178chr7_90410790_+SINEAluAluJb
CAediting_572179chr7_90410801_+SINEAluAluJb
CAediting_572180chr7_90410806_+SINEAluAluJb
CAediting_572181chr7_90410813_+SINEAluAluJb
CAediting_572182chr7_90410816_+SINEAluAluJb
CAediting_572183chr7_90410818_+SINEAluAluJb
CAediting_572184chr7_90410819_+SINEAluAluJb
CAediting_572185chr7_90410820_+SINEAluAluJb
CAediting_572186chr7_90410832_+SINEAluAluJb
CAediting_572187chr7_90410834_+SINEAluAluJb
CAediting_572188chr7_90410835_+SINEAluAluJb
CAediting_572189chr7_90410836_+SINEAluAluJb
CAediting_572190chr7_90410837_+SINEAluAluJb
CAediting_572191chr7_90410838_+SINEAluAluJb
CAediting_572192chr7_90410841_+SINEAluAluJb
CAediting_572193chr7_90410844_+SINEAluAluJb
CAediting_572194chr7_90410845_+SINEAluAluJb
CAediting_572195chr7_90410846_+SINEAluAluJb
CAediting_572196chr7_90410847_+SINEAluAluJb
CAediting_572197chr7_90410850_+SINEAluAluJb
CAediting_572198chr7_90410856_+SINEAluAluJb
CAediting_572199chr7_90410860_+SINEAluAluJb
CAediting_572200chr7_90410864_+SINEAluAluJb
CAediting_572201chr7_90410874_+SINEAluAluJb
CAediting_572202chr7_90410882_+SINEAluAluJb
CAediting_572203chr7_90410890_+SINEAluAluJb
CAediting_572204chr7_90410893_+SINEAluAluJb
CAediting_572205chr7_90410906_+SINEAluAluJb
CAediting_572206chr7_90410917_+SINEAluAluJb
CAediting_572207chr7_90410925_+SINEAluAluJb
CAediting_572208chr7_90410962_+SINEAluAluJb
CAediting_572209chr7_90410981_+SINEAluAluJb
CAediting_572210chr7_90411005_+SINEAluAluJb
CAediting_572211chr7_90411008_+SINEAluAluJb
CAediting_572212chr7_90411009_+SINEAluAluJb
CAediting_572213chr7_90411015_+SINEAluAluJb
CAediting_572214chr7_90428924_+SINEAluAluJo
CAediting_572215chr7_90429018_+SINEAluAluJo
CAediting_572216chr7_90429022_+SINEAluAluJo
CAediting_572217chr7_90429032_+SINEAluAluJo
CAediting_572218chr7_90429075_+SINEAluAluJo
CAediting_572219chr7_90429085_+SINEAluAluJo
CAediting_572220chr7_90466493_+LTRERVLERV3-16A3_I-int
CAediting_572221chr7_90466494_+LTRERVLERV3-16A3_I-int
CAediting_572222chr7_90466502_+LTRERVLERV3-16A3_I-int
CAediting_572223chr7_90466934_+SINEAluAluSp
CAediting_572224chr7_90466941_+SINEAluAluSp
CAediting_572225chr7_90466953_+SINEAluAluSp
CAediting_572226chr7_90467017_+SINEAluAluSp
CAediting_572227chr7_90467060_+SINEAluAluSp
CAediting_572228chr7_90467152_+SINEAluAluSp
CAediting_572229chr7_90467863_+SINEAluAluJb
CAediting_572230chr7_90467889_+SINEAluAluJb
CAediting_572231chr7_90467890_+SINEAluAluJb
CAediting_572232chr7_90467893_+SINEAluAluJb
CAediting_572233chr7_90467896_+SINEAluAluJb
CAediting_572234chr7_90497232_+SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for CLDN12

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000157224.14.CLDN12.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000157224.14.CLDN12.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CLDN12

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
KIRP.CAediting_572042.ENSG00000157224.CLDN12.png
Soverview
LUAD.CAediting_572052.ENSG00000157224.CLDN12.png
Soverview

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Protein coding region RNA A-to-I editings for CLDN12

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CLDN12

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229415chr17_67471547_+ENSG00000157224.14ENST00000287916hsa-miR-548aa90415507904155137mer-m89041549190415514164-10.8
CAediting_1229415chr17_67471547_+ENSG00000157224.14ENST00000287916hsa-miR-548aa90414347904143548mer-1a9041432990414354161-19.65
CAediting_1351755chr19_40282625_-ENSG00000157224.14ENST00000287916hsa-miR-64190414829904148357mer-m89041481190414836145-19.4
CAediting_77128chr1_85133844_+ENSG00000157224.14ENST00000287916hsa-miR-4423-3p90414180904141867mer-m89041416790414187142-14.07
CAediting_228905chr2_188297554_+ENSG00000157224.14ENST00000287916hsa-miR-561-3p90414141904141477mer-m89041412790414148140-12.9
CAediting_1229415chr17_67471547_+ENSG00000157224.14ENST00000394605hsa-miR-548aa90415507904155137mer-m89041549190415514164-10.8
CAediting_1229415chr17_67471547_+ENSG00000157224.14ENST00000394605hsa-miR-548aa90414347904143548mer-1a9041432990414354161-19.65
CAediting_1351755chr19_40282625_-ENSG00000157224.14ENST00000394605hsa-miR-64190414829904148357mer-m89041481190414836145-19.4
CAediting_77128chr1_85133844_+ENSG00000157224.14ENST00000394605hsa-miR-4423-3p90414180904141867mer-m89041416790414187142-14.07
CAediting_228905chr2_188297554_+ENSG00000157224.14ENST00000394605hsa-miR-561-3p90414141904141477mer-m89041412790414148140-12.9

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CLDN12

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000495768.1processed_transcriptSoverviewSoverview
ENST00000498033.4processed_transcriptSoverviewSoverview
ENST00000498326.4processed_transcriptSoverviewSoverview
ENST00000478752.4processed_transcriptSoverviewSoverview
ENST00000485696.1processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_572103ENST00000495768.1chr7_90405844_+-211.10-211.00-226.70
CAediting_572104ENST00000495768.1chr7_90405845_+-210.70-211.00-226.70
CAediting_572105ENST00000495768.1chr7_90405874_+-211.90-211.00-226.70
CAediting_572106ENST00000495768.1chr7_90405918_+-211.70-211.00-226.70
CAediting_572107ENST00000495768.1chr7_90405974_+-212.10-211.00-226.70
CAediting_572108ENST00000495768.1chr7_90405980_+-211.00-211.00-226.70
CAediting_572109ENST00000495768.1chr7_90405982_+-212.00-211.00-226.70
CAediting_572110ENST00000495768.1chr7_90405988_+-210.30-211.00-226.70
CAediting_572111ENST00000495768.1chr7_90406000_+-215.20-211.00-226.70
CAediting_572112ENST00000495768.1chr7_90406048_+-215.60-211.00-226.70
CAediting_572220ENST00000498033.4chr7_90466493_+-108.30-108.00-114.30
CAediting_572221ENST00000498033.4chr7_90466494_+-111.20-108.00-114.30
CAediting_572222ENST00000498033.4chr7_90466502_+-108.90-108.00-114.30
CAediting_572138ENST00000498326.4chr7_90408962_+-93.50-90.20-99.00
CAediting_572139ENST00000498326.4chr7_90408971_+-92.80-90.20-99.00
CAediting_572140ENST00000498326.4chr7_90408983_+-92.90-90.20-99.00
CAediting_572141ENST00000498326.4chr7_90408984_+-90.90-90.20-99.00
CAediting_572142ENST00000498326.4chr7_90408996_+-90.10-90.20-99.00
CAediting_572143ENST00000498326.4chr7_90409042_+-91.40-90.20-99.00
CAediting_572220ENST00000478752.4chr7_90466493_+-182.10-182.40-182.20
CAediting_572221ENST00000478752.4chr7_90466494_+-182.00-182.40-182.20
CAediting_572222ENST00000478752.4chr7_90466502_+-183.40-182.40-182.20
CAediting_572220ENST00000485696.1chr7_90466493_+-72.60-72.60-77.00
CAediting_572221ENST00000485696.1chr7_90466494_+-73.80-72.60-77.00
CAediting_572222ENST00000485696.1chr7_90466502_+-72.90-72.60-77.00

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Relation with ADAR for CLDN12

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_571957chr7_90385870_+..0.0300748169918720.292764801039498..
COADCAediting_571972chr7_90385910_+....0.01751221553727610.289451185184478
LUSCCAediting_571972chr7_90385910_+..0.01162587368113450.31854674747454..
THCACAediting_571972chr7_90385910_+0.04571467868613060.241373480750602....
STADCAediting_571974chr7_90385920_+..0.001213340662134560.325467992826107..
BRCACAediting_571977chr7_90385953_+..0.01360192128554660.156517064976277..
THCACAediting_571986chr7_90386002_+0.007987508602620880.310285632428887....
BRCACAediting_572036chr7_90389451_+3.52428391191099e-050.243270378269533....
BRCACAediting_572039chr7_90389486_+1.83152028183674e-120.438523530798815....
GBMCAediting_572039chr7_90389486_+0.0001398648540615030.479507792567784....
THCACAediting_572039chr7_90389486_+0.04788330538839780.226227972458131....
OVCAediting_572039chr7_90389486_+0.0003758119838701020.270468202374706....
LGGCAediting_572040chr7_90389487_+0.001970939575138010.259373855501433....
BRCACAediting_572040chr7_90389487_+1.51495192273259e-110.358678946172254....
LIHCCAediting_572040chr7_90389487_+0.003998392863556840.360501430366102....
CESCCAediting_572040chr7_90389487_+0.01742293433776340.298665518774312....
LUSCCAediting_572040chr7_90389487_+0.01104024682289740.3259393729687760.02280681454575740.293581345899109..
GBMCAediting_572040chr7_90389487_+0.005078401009630230.296197404430069....
STADCAediting_572040chr7_90389487_+0.004442678805205280.272988178476891....
THCACAediting_572040chr7_90389487_+0.000693269987814790.259924087334625....
OVCAediting_572040chr7_90389487_+3.76584539011511e-050.274086077203492....
SKCMCAediting_572040chr7_90389487_+0.008412801456229110.317130799320797....
TGCTCAediting_572040chr7_90389487_+8.97375317298191e-050.51177569867726....
THYMCAediting_572040chr7_90389487_+0.0007166360945903360.412056903976639....
LGGCAediting_572041chr7_90389490_+0.01619539935552150.193500295366879....
BRCACAediting_572041chr7_90389490_+1.63031488056834e-080.299430177766169....
LIHCCAediting_572041chr7_90389490_+0.00596802650831390.376313031110259....
CESCCAediting_572041chr7_90389490_+0.02061299970625320.298300608818194....
LUADCAediting_572041chr7_90389490_+0.01259505243824840.325714758427924....
COADCAediting_572041chr7_90389490_+0.03260265418870370.237717907392452....
LUSCCAediting_572041chr7_90389490_+0.004813968460570330.365250120000515....
STADCAediting_572041chr7_90389490_+4.58119228252522e-050.357487040433841....
THCACAediting_572041chr7_90389490_+0.000664656914433770.250007136606056....
KIRPCAediting_572041chr7_90389490_+0.04017144647520750.214371011362706....
OVCAediting_572041chr7_90389490_+6.55128635074693e-060.288102031941431....
SKCMCAediting_572041chr7_90389490_+0.001152011132115650.363609835643798....
SARCCAediting_572041chr7_90389490_+0.006172823879015220.364812784113912....
TGCTCAediting_572041chr7_90389490_+5.44378874596179e-070.611841505698026....
THYMCAediting_572041chr7_90389490_+0.04015375794613940.227139293214113....
BRCACAediting_572042chr7_90389491_+0.009240157922754170.177978302929816....
GBMCAediting_572042chr7_90389491_+0.02926835022901490.246970087556286..0.02501956308269730.253683886809112
STADCAediting_572042chr7_90389491_+0.01321525283897580.242276215743474....
THCACAediting_572042chr7_90389491_+0.01550219453906190.236818268306707....
BRCACAediting_572043chr7_90389504_+0.01868403073186740.247488700529672....
ESCACAediting_572043chr7_90389504_+..0.00207527557305420.417478498803521..
OVCAediting_572043chr7_90389504_+0.03617540627771550.189893395880383....
BRCACAediting_572048chr7_90389552_+7.4939941304049e-060.316161265634725....
GBMCAediting_572048chr7_90389552_+0.01165657341174460.264818252842986....
STADCAediting_572048chr7_90389552_+0.03692736408104560.188374932477999....
THCACAediting_572048chr7_90389552_+2.95315015111007e-050.38704987252948....
ESCACAediting_572048chr7_90389552_+..0.0219093612561920.234955959595119..
OVCAediting_572048chr7_90389552_+4.24828089923797e-050.291647774406554....
BRCACAediting_572051chr7_90389567_+4.9168894578147e-050.250879639750364....
LUSCCAediting_572051chr7_90389567_+....0.019878513135910.302494293044727
PRADCAediting_572051chr7_90389567_+0.04045441971645370.26535409290028....
LGGCAediting_572052chr7_90389570_+1.11922359666019e-060.389010004237107....
BRCACAediting_572052chr7_90389570_+3.75241785249516e-180.388351927959521....
CESCCAediting_572052chr7_90389570_+0.04939146038236080.232485482831137....
LUADCAediting_572052chr7_90389570_+0.0002281351382389340.398600531066732....
COADCAediting_572052chr7_90389570_+0.01512426454362660.244800112391537....
LUSCCAediting_572052chr7_90389570_+0.0002751988207996930.3632523615536780.00140927769419140.321377847189734..
GBMCAediting_572052chr7_90389570_+0.001849355678627550.310667824720273....
PRADCAediting_572052chr7_90389570_+3.75966077131063e-070.358627137723004....
STADCAediting_572052chr7_90389570_+0.007035716074959590.222925599351517....
THCACAediting_572052chr7_90389570_+2.8827495872535e-090.385228291872385....
KIRCCAediting_572052chr7_90389570_+4.15942586656149e-050.415762141356156....
KIRPCAediting_572052chr7_90389570_+3.66227470750201e-060.470859754990363....
OVCAediting_572052chr7_90389570_+0.0003415404659061330.245414440954969....
SKCMCAediting_572052chr7_90389570_+0.0006198341153416720.353984565261771....
TGCTCAediting_572052chr7_90389570_+1.63247074108043e-050.533274647339403....
THYMCAediting_572052chr7_90389570_+7.58151974821324e-090.5945802767736780.009851073591512620.288774779435747..
LGGCAediting_572057chr7_90389817_+0.04351241872566460.212140691135184....
BRCACAediting_572057chr7_90389817_+7.65977219264257e-110.342425321534923....
LUADCAediting_572057chr7_90389817_+0.001312339033050510.405391994796606....
PRADCAediting_572057chr7_90389817_+0.02055302796217760.246596628792453....
STADCAediting_572057chr7_90389817_+0.01521513919282020.175414798842952....
THCACAediting_572057chr7_90389817_+4.24723882545886e-050.411118812838231....
ESCACAediting_572057chr7_90389817_+0.01196928726829270.256891556084886....
BRCACAediting_572067chr7_90389892_+..0.01767732518455280.152395012899331..
PRADCAediting_572067chr7_90389892_+..0.04308935718768720.234251404358048..
ESCACAediting_572067chr7_90389892_+0.005689488793935660.341900708343614....
LGGCAediting_572072chr7_90389921_+0.04490228928942480.174217073451573....
BRCACAediting_572072chr7_90389921_+7.62173523903357e-070.241612855611499....
LUSCCAediting_572072chr7_90389921_+0.04690656135110530.241869800342252....
GBMCAediting_572072chr7_90389921_+0.003325665280132440.30462815837883....
KIRCCAediting_572072chr7_90389921_+0.001479634401662570.389208896650717....
KIRPCAediting_572072chr7_90389921_+0.04953030189202160.235668246901732....
ESCACAediting_572072chr7_90389921_+..0.02718660286877790.196810707015533..
SKCMCAediting_572072chr7_90389921_+0.002674572010888510.390469180023673....
BRCACAediting_572075chr7_90389930_+0.005121691309630650.143896994470148....
BRCACAediting_572083chr7_90389980_+8.55193723976401e-090.204290719721053....
CESCCAediting_572083chr7_90389980_+0.02490942044658060.220947850980327....
LUADCAediting_572083chr7_90389980_+0.001296683712151530.24196832010308....
LUSCCAediting_572083chr7_90389980_+0.004253934713815140.198397898458968....
GBMCAediting_572083chr7_90389980_+0.02196689978685360.226669422551095....
PRADCAediting_572083chr7_90389980_+..0.0271840550126720.122347703766481..
KICHCAediting_572083chr7_90389980_+..0.004462226447347430.377773841638791..
THCACAediting_572083chr7_90389980_+0.01029483412110440.136022959589589....
UCECCAediting_572083chr7_90389980_+0.004589536999690070.387038384463724....
PCPGCAediting_572083chr7_90389980_+....0.01977037947478640.30274727831775
SKCMCAediting_572083chr7_90389980_+0.0009594808514098020.242771714398664....
SARCCAediting_572083chr7_90389980_+0.02513885370335540.2534826491256310.03047824057029520.245209490373718..
BLCACAediting_572096chr7_90390053_+0.0002923391107616420.338935204029256....
LGGCAediting_572096chr7_90390053_+1.27263517187838e-050.278764365200404....
BRCACAediting_572096chr7_90390053_+2.47782862855477e-580.528225148337089....
LIHCCAediting_572096chr7_90390053_+4.45233379043934e-050.360810750847557....
CESCCAediting_572096chr7_90390053_+4.56795976170216e-050.367556936878957....
LUADCAediting_572096chr7_90390053_+4.48827043227404e-060.335250827399777....
COADCAediting_572096chr7_90390053_+1.50383227663104e-060.3622627010794460.03169084585565560.166329071202404..
LUSCCAediting_572096chr7_90390053_+3.76342802652641e-080.365153563597853....
GBMCAediting_572096chr7_90390053_+0.0001485313953425440.379560637730358....
PRADCAediting_572096chr7_90390053_+7.17690244006464e-090.361219843871043....
HNSCCAediting_572096chr7_90390053_+4.73377994628106e-060.362665347753614....
STADCAediting_572096chr7_90390053_+1.21370328607844e-080.380561503247445....
THCACAediting_572096chr7_90390053_+1.06033084678336e-060.28628240918784....
KIRCCAediting_572096chr7_90390053_+7.77857364895131e-090.348434116784034....
UCECCAediting_572096chr7_90390053_+0.0005794065996634310.40664257485987....
ESCACAediting_572096chr7_90390053_+0.01082854247921940.224548570603955....
OVCAediting_572096chr7_90390053_+0.0007983028654008170.224471666997228....
PAADCAediting_572096chr7_90390053_+0.02587520452883160.287587177141851....
SKCMCAediting_572096chr7_90390053_+2.7284808031759e-080.400694264351871....
SARCCAediting_572096chr7_90390053_+0.001554233186172560.363857423085016....
TGCTCAediting_572096chr7_90390053_+8.29698926749984e-090.56998350297758....
THYMCAediting_572096chr7_90390053_+9.90517103944147e-060.532696866534276....
BLCACAediting_572097chr7_90390059_+3.06214588764912e-060.445348665101667....
LGGCAediting_572097chr7_90390059_+0.0002246059165667790.202996253435870.0008028744962392410.1847482503476150.009786001904159240.142889748518899
BRCACAediting_572097chr7_90390059_+7.32166068003568e-450.484416960105469....
LIHCCAediting_572097chr7_90390059_+0.02432941229952470.27496013343273....
CESCCAediting_572097chr7_90390059_+2.10891159972407e-070.480658422901484....
LUADCAediting_572097chr7_90390059_+0.0001224517346455720.298135480882091....
COADCAediting_572097chr7_90390059_+2.02542657660693e-090.4051375615204830.00175817232159960.218258577432736..
LUSCCAediting_572097chr7_90390059_+1.09822159387969e-050.322959986716777....
GBMCAediting_572097chr7_90390059_+0.0004553548184822780.289404689404132....
PRADCAediting_572097chr7_90390059_+2.31582675581684e-070.292303132295352....
HNSCCAediting_572097chr7_90390059_+0.0003211654935674190.339774644460309....
STADCAediting_572097chr7_90390059_+3.33320690038463e-080.336078750914489....
THCACAediting_572097chr7_90390059_+6.7563600824645e-080.29744192371736....
KIRCCAediting_572097chr7_90390059_+0.0001246992203151150.256380595293894....
UCECCAediting_572097chr7_90390059_+4.97496462119862e-050.510472772807685....
KIRPCAediting_572097chr7_90390059_+0.01699442245571680.202907679293963....
ESCACAediting_572097chr7_90390059_+2.70714959531904e-050.343243570411267....
OVCAediting_572097chr7_90390059_+4.18706921005656e-060.278908933879013....
SKCMCAediting_572097chr7_90390059_+1.2365715087712e-100.4755445534642880.003919638671084330.224088371660216..
READCAediting_572097chr7_90390059_+2.76393765537783e-050.485057261909467....
SARCCAediting_572097chr7_90390059_+0.003035638515097590.356835734729326....
TGCTCAediting_572097chr7_90390059_+6.5663957170615e-060.500319202879153....
THYMCAediting_572097chr7_90390059_+0.01637216096222380.284035623787954....
ESCACAediting_572180chr7_90410806_+..0.04436920403615540.282773758842426..
STADCAediting_572206chr7_90410917_+0.03892998552439410.254830947311804....

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Relation with cancer stages for CLDN12

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_572097chr7_90390059_+0.008693487454058930.26110231220956
BRCApathologic_stageCAediting_572041chr7_90389490_+0.02470130090406220.12252623285477
BRCApathologic_stageCAediting_572097chr7_90390059_+0.02174608641039040.0851590317312152
ESCAclinical_stageCAediting_572048chr7_90389552_+0.0361802427000125-0.366024899346185
ESCAclinical_stageCAediting_572052chr7_90389570_+0.000203888441139923-0.567310448585749
ESCApathologic_stageCAediting_572057chr7_90389817_+0.0427114002875073-0.215327908272854
KIRCpathologic_stageCAediting_572083chr7_90389980_+0.04927669500056970.133646188013159
KIRCpathologic_stageCAediting_572096chr7_90390053_+0.02532570091101430.138960293889756
KIRCpathologic_stageCAediting_572097chr7_90390059_+0.001667645471287880.211723703254131
KIRPclinical_stageCAediting_572097chr7_90390059_+0.0003957287951030480.373578488932055
KIRPpathologic_stageCAediting_572097chr7_90390059_+0.009230906325218640.236744620130243
OVclinical_stageCAediting_571986chr7_90386002_+0.03204569674590220.237001809041315
OVclinical_stageCAediting_572045chr7_90389516_+0.04242239838101990.269765067705929
TGCTclinical_stageCAediting_572097chr7_90390059_+0.0106803494861151-0.414843689465719
TGCTpathologic_stageCAediting_572097chr7_90390059_+0.0122976123611011-0.39715930870647
THCApathologic_stageCAediting_571972chr7_90385910_+0.006244686176004820.328459522154663
THCApathologic_stageCAediting_572048chr7_90389552_+0.001151498676486790.31010775833122
THCApathologic_stageCAediting_572052chr7_90389570_+0.03164675246447180.145598722090412
THCApathologic_stageCAediting_572096chr7_90390053_+0.02847766167636230.131407854933453

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Relation with survival for CLDN12

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
CESCCAediting_572040chr7_90389487_+0.004094107147974760.03776610.00482068
CESCCAediting_572041chr7_90389490_+0.01995237336967960.007669360.00304489
STADCAediting_571972chr7_90385910_+0.02892415892303960.04102440.0189926
KIRPCAediting_572096chr7_90390053_+0.01023225854696470.006319515499.57
ESCACAediting_572206chr7_90410917_+0.006660627417843350.021881320.7757

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RelatedDrugs for CLDN12

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CLDN12

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource