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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ZNF439 (CAeditome ID:90594)

Gene summary for ZNF439

check button Gene summary
Gene informationGene symbol

ZNF439

Gene ID

90594

Gene namezinc finger protein 439
Synonyms-
Cytomap

19p13.2

Type of geneprotein-coding
Descriptionzinc finger protein 439
Modification date20210518
UniProtAcc

Q8NDP4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for ZNF439

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000171291.7

check button RNA A-to-I editing events in Cancer.
CAediting_1299155(11850093, +), CAediting_1299156(11850095, +), CAediting_1299157(11850130, +), CAediting_1299158(11850173, +), CAediting_1299159(11850174, +), CAediting_1299160(11850203, +), CAediting_1299161(11850215, +), CAediting_1299162(11850235, +), CAediting_1299163(11850254, +), CAediting_1299164(11850271, +), CAediting_1299165(11850283, +), CAediting_1299166(11850294, +), CAediting_1299167(11850334, +), CAediting_1299168(11850336, +), CAediting_1299169(11850759, +), CAediting_1299170(11850766, +), CAediting_1299171(11850774, +), CAediting_1299172(11850775, +), CAediting_1299173(11850780, +), CAediting_1299174(11850802, +), CAediting_1299175(11850815, +), CAediting_1299176(11850820, +), CAediting_1299177(11850844, +), CAediting_1299178(11850848, +), CAediting_1299179(11850853, +), CAediting_1299180(11850854, +), CAediting_1299181(11850868, +), CAediting_1299182(11850878, +), CAediting_1299183(11850879, +), CAediting_1299184(11850880, +), CAediting_1299185(11850881, +), CAediting_1299186(11850884, +), CAediting_1299187(11850910, +), CAediting_1299188(11850924, +), CAediting_1299189(11850942, +), CAediting_1299190(11850946, +), CAediting_1299191(11850952, +), CAediting_1299192(11850959, +), CAediting_1299193(11850963, +), CAediting_1299194(11850982, +), CAediting_1299195(11850997, +), CAediting_1299196(11851012, +), CAediting_1299197(11851014, +), CAediting_1299198(11851027, +), CAediting_1299199(11851037, +), CAediting_1299200(11851046, +), CAediting_1299201(11851713, +), CAediting_1299202(11851774, +), CAediting_1299203(11851778, +), CAediting_1299204(11851783, +), CAediting_1299205(11851886, +), CAediting_1299206(11852171, +), CAediting_1299207(11852187, +), CAediting_1299208(11852239, +), CAediting_1299209(11852579, +), CAediting_1299210(11852603, +), CAediting_1299211(11852610, +), CAediting_1299212(11852613, +), CAediting_1299213(11852614, +), CAediting_1299214(11852635, +), CAediting_1299215(11852636, +), CAediting_1299216(11852639, +), CAediting_1299217(11852649, +), CAediting_1299218(11852667, +), CAediting_1299219(11852675, +), CAediting_1299220(11852676, +), CAediting_1299221(11852690, +), CAediting_1299222(11852712, +), CAediting_1299223(11852745, +), CAediting_1299224(11852757, +), CAediting_1299225(11852771, +), CAediting_1299226(11852772, +), CAediting_1299227(11852784, +), CAediting_1299228(11852985, +), CAediting_1299229(11852994, +), CAediting_1299230(11853023, +), CAediting_1299231(11853029, +), CAediting_1299232(11853030, +), CAediting_1299233(11853059, +), CAediting_1299234(11853069, +), CAediting_1299235(11853113, +), CAediting_1299236(11853130, +), CAediting_1299237(11853191, +), CAediting_1299238(11853203, +), CAediting_1299239(11854482, +), CAediting_1299240(11854548, +), CAediting_1299241(11854737, +), CAediting_1299242(11858345, +), CAediting_1299243(11858387, +), CAediting_1299244(11858394, +), CAediting_1299245(11858411, +), CAediting_1299246(11860195, +), CAediting_1299247(11860230, +), CAediting_1299248(11860238, +), CAediting_1299249(11860239, +), CAediting_1299250(11862910, +), CAediting_1299251(11862939, +), CAediting_1299252(11863366, +), CAediting_1299253(11863412, +), CAediting_1299254(11863924, +), CAediting_1299255(11864329, +), CAediting_1299256(11864346, +), CAediting_1299257(11864399, +), CAediting_1299258(11864410, +), CAediting_1299259(11864415, +), CAediting_1299260(11864423, +), CAediting_1299261(11864424, +), CAediting_1299262(11864427, +), CAediting_1299263(11864428, +), CAediting_1299264(11864432, +), CAediting_1299265(11864439, +), CAediting_1299266(11864443, +), CAediting_1299267(11864462, +), CAediting_1299268(11864480, +), CAediting_1299269(11864482, +), CAediting_1299270(11864494, +), CAediting_1299271(11864502, +), CAediting_1299272(11864506, +), CAediting_1299273(11864517, +), CAediting_1299274(11864540, +), CAediting_1299275(11864559, +), CAediting_1299276(11864825, +), CAediting_1299277(11864856, +), CAediting_1299278(11864858, +), CAediting_1299279(11864869, +), CAediting_1299280(11864881, +), CAediting_1299281(11864884, +), CAediting_1299282(11864898, +), CAediting_1299283(11864910, +), CAediting_1299284(11864946, +), CAediting_1299285(11864947, +), CAediting_1299286(11864954, +), CAediting_1299287(11864960, +), CAediting_1299288(11864969, +), CAediting_1299289(11864970, +), CAediting_1299290(11865001, +), CAediting_1299291(11865041, +), CAediting_1299292(11865042, +), CAediting_1299293(11865054, +), CAediting_1299294(11865799, +), CAediting_1299295(11865813, +), CAediting_1299296(11865838, +), CAediting_1299297(11865852, +), CAediting_1299298(11865863, +), CAediting_1299299(11865867, +), CAediting_1299300(11865870, +), CAediting_1299301(11865872, +), CAediting_1299302(11865875, +), CAediting_1299303(11865876, +), CAediting_1299304(11865877, +), CAediting_1299305(11865880, +), CAediting_1299306(11865906, +), CAediting_1299307(11865907, +), CAediting_1299308(11865912, +), CAediting_1299309(11865916, +), CAediting_1299310(11865923, +), CAediting_1299311(11865972, +), CAediting_1299312(11865985, +), CAediting_1299313(11866004, +), CAediting_1299314(11866005, +), CAediting_1299315(11869679, +), CAediting_1299316(11869680, +), CAediting_1299317(11869688, +), CAediting_1299318(11869700, +), CAediting_1299319(11869712, +), CAediting_1299320(11869721, +), CAediting_1299321(11869731, +), CAediting_1299322(11869736, +), CAediting_1299323(11869737, +), CAediting_1299324(11869750, +), CAediting_1299325(11869758, +), CAediting_1299326(11869760, +), CAediting_1299327(11869774, +), CAediting_1299328(11869783, +), CAediting_1299329(11869786, +), CAediting_1299330(11869796, +), CAediting_1299331(11869832, +), CAediting_1299332(11869839, +), CAediting_1299333(11869842, +), CAediting_1299334(11869846, +), CAediting_1299335(11869856, +), CAediting_1299336(11869859, +), CAediting_1299337(11869861, +), CAediting_1299338(11869868, +), CAediting_1299339(11869896, +), CAediting_1299340(11869918, +), CAediting_1299341(11869919, +), CAediting_1299342(11869931, +), CAediting_1299343(11869937, +), CAediting_1299344(11870340, +), CAediting_1299345(11870345, +), CAediting_1299346(11870346, +), CAediting_1299347(11870347, +), CAediting_1299348(11870348, +), CAediting_1299349(11870352, +), CAediting_1299350(11870355, +), CAediting_1299351(11870357, +), CAediting_1299352(11870377, +), CAediting_1299353(11870401, +), CAediting_1299354(11870403, +), CAediting_1299355(11870404, +), CAediting_1299356(11870412, +), CAediting_1299357(11870415, +), CAediting_1299358(11870416, +), CAediting_1299359(11870426, +), CAediting_1299360(11870455, +), CAediting_1299361(11870459, +), CAediting_1299362(11870481, +), CAediting_1299363(11870482, +), CAediting_1299364(11870487, +), CAediting_1299365(11870491, +), CAediting_1299366(11870495, +), CAediting_1299367(11870504, +), CAediting_1299368(11870508, +), CAediting_1299369(11870517, +), CAediting_1299370(11870530, +), CAediting_1299371(11870534, +), CAediting_1299372(11870536, +), CAediting_1299373(11870543, +), CAediting_1299374(11870547, +), CAediting_1299375(11870554, +), CAediting_1299376(11870582, +), CAediting_1299377(11870592, +), CAediting_1299378(11870593, +), CAediting_1299379(11871442, +), CAediting_1299380(11871447, +), CAediting_1299381(11873618, +), CAediting_1299382(11873727, +), CAediting_1299383(11874924, +), CAediting_1299384(11874925, +),

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RNA editing positional annotations for ZNF439 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1299155chr19_11850093_+ncRNA_exonic
CAediting_1299156chr19_11850095_+ncRNA_exonic
CAediting_1299157chr19_11850130_+ncRNA_exonic
CAediting_1299158chr19_11850173_+ncRNA_exonic
CAediting_1299159chr19_11850174_+ncRNA_exonic
CAediting_1299160chr19_11850203_+ncRNA_exonic
CAediting_1299161chr19_11850215_+ncRNA_exonic
CAediting_1299162chr19_11850235_+ncRNA_exonic
CAediting_1299163chr19_11850254_+ncRNA_exonic
CAediting_1299164chr19_11850271_+ncRNA_exonic
CAediting_1299165chr19_11850283_+ncRNA_exonic
CAediting_1299166chr19_11850294_+ncRNA_exonic
CAediting_1299167chr19_11850334_+ncRNA_exonic
CAediting_1299168chr19_11850336_+ncRNA_exonic
CAediting_1299169chr19_11850759_+ncRNA_exonic
CAediting_1299170chr19_11850766_+ncRNA_exonic
CAediting_1299171chr19_11850774_+ncRNA_exonic
CAediting_1299172chr19_11850775_+ncRNA_exonic
CAediting_1299173chr19_11850780_+ncRNA_exonic
CAediting_1299174chr19_11850802_+ncRNA_exonic
CAediting_1299175chr19_11850815_+ncRNA_exonic
CAediting_1299176chr19_11850820_+ncRNA_exonic
CAediting_1299177chr19_11850844_+ncRNA_exonic
CAediting_1299178chr19_11850848_+ncRNA_exonic
CAediting_1299179chr19_11850853_+ncRNA_exonic
CAediting_1299180chr19_11850854_+ncRNA_exonic
CAediting_1299181chr19_11850868_+ncRNA_exonic
CAediting_1299182chr19_11850878_+ncRNA_exonic
CAediting_1299183chr19_11850879_+ncRNA_exonic
CAediting_1299184chr19_11850880_+ncRNA_exonic
CAediting_1299185chr19_11850881_+ncRNA_exonic
CAediting_1299186chr19_11850884_+ncRNA_exonic
CAediting_1299187chr19_11850910_+ncRNA_exonic
CAediting_1299188chr19_11850924_+ncRNA_exonic
CAediting_1299189chr19_11850942_+ncRNA_exonic
CAediting_1299190chr19_11850946_+ncRNA_exonic
CAediting_1299191chr19_11850952_+ncRNA_exonic
CAediting_1299192chr19_11850959_+ncRNA_exonic
CAediting_1299193chr19_11850963_+ncRNA_exonic
CAediting_1299194chr19_11850982_+ncRNA_exonic
CAediting_1299195chr19_11850997_+ncRNA_exonic
CAediting_1299196chr19_11851012_+ncRNA_exonic
CAediting_1299197chr19_11851014_+ncRNA_exonic
CAediting_1299198chr19_11851027_+ncRNA_exonic
CAediting_1299199chr19_11851037_+ncRNA_exonic
CAediting_1299200chr19_11851046_+ncRNA_exonic
CAediting_1299201chr19_11851713_+ncRNA_intronic
CAediting_1299202chr19_11851774_+ncRNA_intronic
CAediting_1299203chr19_11851778_+ncRNA_intronic
CAediting_1299204chr19_11851783_+ncRNA_intronic
CAediting_1299205chr19_11851886_+ncRNA_intronic
CAediting_1299206chr19_11852171_+ncRNA_intronic
CAediting_1299207chr19_11852187_+ncRNA_intronic
CAediting_1299208chr19_11852239_+ncRNA_intronic
CAediting_1299209chr19_11852579_+ncRNA_intronic
CAediting_1299210chr19_11852603_+ncRNA_intronic
CAediting_1299211chr19_11852610_+ncRNA_intronic
CAediting_1299212chr19_11852613_+ncRNA_intronic
CAediting_1299213chr19_11852614_+ncRNA_intronic
CAediting_1299214chr19_11852635_+ncRNA_intronic
CAediting_1299215chr19_11852636_+ncRNA_intronic
CAediting_1299216chr19_11852639_+ncRNA_intronic
CAediting_1299217chr19_11852649_+ncRNA_intronic
CAediting_1299218chr19_11852667_+ncRNA_intronic
CAediting_1299219chr19_11852675_+ncRNA_intronic
CAediting_1299220chr19_11852676_+ncRNA_intronic
CAediting_1299221chr19_11852690_+ncRNA_intronic
CAediting_1299222chr19_11852712_+ncRNA_intronic
CAediting_1299223chr19_11852745_+ncRNA_intronic
CAediting_1299224chr19_11852757_+ncRNA_intronic
CAediting_1299225chr19_11852771_+ncRNA_intronic
CAediting_1299226chr19_11852772_+ncRNA_intronic
CAediting_1299227chr19_11852784_+ncRNA_intronic
CAediting_1299228chr19_11852985_+ncRNA_intronic
CAediting_1299229chr19_11852994_+ncRNA_intronic
CAediting_1299230chr19_11853023_+ncRNA_intronic
CAediting_1299231chr19_11853029_+ncRNA_intronic
CAediting_1299232chr19_11853030_+ncRNA_intronic
CAediting_1299233chr19_11853059_+ncRNA_intronic
CAediting_1299234chr19_11853069_+ncRNA_intronic
CAediting_1299235chr19_11853113_+ncRNA_intronic
CAediting_1299236chr19_11853130_+ncRNA_intronic
CAediting_1299237chr19_11853191_+ncRNA_intronic
CAediting_1299238chr19_11853203_+ncRNA_intronic
CAediting_1299239chr19_11854482_+ncRNA_intronic
CAediting_1299240chr19_11854548_+ncRNA_intronic
CAediting_1299241chr19_11854737_+ncRNA_intronic
CAediting_1299242chr19_11858345_+ncRNA_intronic
CAediting_1299243chr19_11858387_+ncRNA_intronic
CAediting_1299244chr19_11858394_+ncRNA_intronic
CAediting_1299245chr19_11858411_+ncRNA_intronic
CAediting_1299246chr19_11860195_+ncRNA_intronic
CAediting_1299247chr19_11860230_+ncRNA_intronic
CAediting_1299248chr19_11860238_+ncRNA_intronic
CAediting_1299249chr19_11860239_+ncRNA_intronic
CAediting_1299250chr19_11862910_+ncRNA_intronic
CAediting_1299251chr19_11862939_+ncRNA_intronic
CAediting_1299252chr19_11863366_+ncRNA_intronic
CAediting_1299253chr19_11863412_+ncRNA_intronic
CAediting_1299254chr19_11863924_+ncRNA_intronic
CAediting_1299255chr19_11864329_+ncRNA_intronic
CAediting_1299256chr19_11864346_+ncRNA_intronic
CAediting_1299257chr19_11864399_+ncRNA_intronic
CAediting_1299258chr19_11864410_+ncRNA_intronic
CAediting_1299259chr19_11864415_+ncRNA_intronic
CAediting_1299260chr19_11864423_+ncRNA_intronic
CAediting_1299261chr19_11864424_+ncRNA_intronic
CAediting_1299262chr19_11864427_+ncRNA_intronic
CAediting_1299263chr19_11864428_+ncRNA_intronic
CAediting_1299264chr19_11864432_+ncRNA_intronic
CAediting_1299265chr19_11864439_+ncRNA_intronic
CAediting_1299266chr19_11864443_+ncRNA_intronic
CAediting_1299267chr19_11864462_+ncRNA_intronic
CAediting_1299268chr19_11864480_+ncRNA_intronic
CAediting_1299269chr19_11864482_+ncRNA_intronic
CAediting_1299270chr19_11864494_+ncRNA_intronic
CAediting_1299271chr19_11864502_+ncRNA_intronic
CAediting_1299272chr19_11864506_+ncRNA_intronic
CAediting_1299273chr19_11864517_+ncRNA_intronic
CAediting_1299274chr19_11864540_+ncRNA_intronic
CAediting_1299275chr19_11864559_+ncRNA_intronic
CAediting_1299276chr19_11864825_+ncRNA_intronic
CAediting_1299277chr19_11864856_+ncRNA_intronic
CAediting_1299278chr19_11864858_+ncRNA_intronic
CAediting_1299279chr19_11864869_+ncRNA_intronic
CAediting_1299280chr19_11864881_+ncRNA_intronic
CAediting_1299281chr19_11864884_+ncRNA_intronic
CAediting_1299282chr19_11864898_+ncRNA_intronic
CAediting_1299283chr19_11864910_+ncRNA_intronic
CAediting_1299284chr19_11864946_+ncRNA_intronic
CAediting_1299285chr19_11864947_+ncRNA_intronic
CAediting_1299286chr19_11864954_+ncRNA_intronic
CAediting_1299287chr19_11864960_+ncRNA_intronic
CAediting_1299288chr19_11864969_+ncRNA_intronic
CAediting_1299289chr19_11864970_+ncRNA_intronic
CAediting_1299290chr19_11865001_+ncRNA_intronic
CAediting_1299291chr19_11865041_+ncRNA_intronic
CAediting_1299292chr19_11865042_+ncRNA_intronic
CAediting_1299293chr19_11865054_+ncRNA_intronic
CAediting_1299294chr19_11865799_+ncRNA_intronic
CAediting_1299295chr19_11865813_+ncRNA_intronic
CAediting_1299296chr19_11865838_+ncRNA_intronic
CAediting_1299297chr19_11865852_+ncRNA_intronic
CAediting_1299298chr19_11865863_+ncRNA_intronic
CAediting_1299299chr19_11865867_+ncRNA_intronic
CAediting_1299300chr19_11865870_+ncRNA_intronic
CAediting_1299301chr19_11865872_+ncRNA_intronic
CAediting_1299302chr19_11865875_+ncRNA_intronic
CAediting_1299303chr19_11865876_+ncRNA_intronic
CAediting_1299304chr19_11865877_+ncRNA_intronic
CAediting_1299305chr19_11865880_+ncRNA_intronic
CAediting_1299306chr19_11865906_+ncRNA_intronic
CAediting_1299307chr19_11865907_+ncRNA_intronic
CAediting_1299308chr19_11865912_+ncRNA_intronic
CAediting_1299309chr19_11865916_+ncRNA_intronic
CAediting_1299310chr19_11865923_+ncRNA_intronic
CAediting_1299311chr19_11865972_+ncRNA_intronic
CAediting_1299312chr19_11865985_+ncRNA_intronic
CAediting_1299313chr19_11866004_+ncRNA_intronic
CAediting_1299314chr19_11866005_+ncRNA_intronic
CAediting_1299315chr19_11869679_+ncRNA_intronic
CAediting_1299316chr19_11869680_+ncRNA_intronic
CAediting_1299317chr19_11869688_+ncRNA_intronic
CAediting_1299318chr19_11869700_+ncRNA_intronic
CAediting_1299319chr19_11869712_+ncRNA_intronic
CAediting_1299320chr19_11869721_+ncRNA_intronic
CAediting_1299321chr19_11869731_+ncRNA_intronic
CAediting_1299322chr19_11869736_+ncRNA_intronic
CAediting_1299323chr19_11869737_+ncRNA_intronic
CAediting_1299324chr19_11869750_+ncRNA_intronic
CAediting_1299325chr19_11869758_+ncRNA_intronic
CAediting_1299326chr19_11869760_+ncRNA_intronic
CAediting_1299327chr19_11869774_+ncRNA_intronic
CAediting_1299328chr19_11869783_+ncRNA_intronic
CAediting_1299329chr19_11869786_+ncRNA_intronic
CAediting_1299330chr19_11869796_+ncRNA_intronic
CAediting_1299331chr19_11869832_+ncRNA_intronic
CAediting_1299332chr19_11869839_+ncRNA_intronic
CAediting_1299333chr19_11869842_+ncRNA_intronic
CAediting_1299334chr19_11869846_+ncRNA_intronic
CAediting_1299335chr19_11869856_+ncRNA_intronic
CAediting_1299336chr19_11869859_+ncRNA_intronic
CAediting_1299337chr19_11869861_+ncRNA_intronic
CAediting_1299338chr19_11869868_+ncRNA_intronic
CAediting_1299339chr19_11869896_+ncRNA_intronic
CAediting_1299340chr19_11869918_+ncRNA_intronic
CAediting_1299341chr19_11869919_+ncRNA_intronic
CAediting_1299342chr19_11869931_+ncRNA_intronic
CAediting_1299343chr19_11869937_+ncRNA_intronic
CAediting_1299344chr19_11870340_+ncRNA_intronic
CAediting_1299345chr19_11870345_+ncRNA_intronic
CAediting_1299346chr19_11870346_+ncRNA_intronic
CAediting_1299347chr19_11870347_+ncRNA_intronic
CAediting_1299348chr19_11870348_+ncRNA_intronic
CAediting_1299349chr19_11870352_+ncRNA_intronic
CAediting_1299350chr19_11870355_+ncRNA_intronic
CAediting_1299351chr19_11870357_+ncRNA_intronic
CAediting_1299352chr19_11870377_+ncRNA_intronic
CAediting_1299353chr19_11870401_+ncRNA_intronic
CAediting_1299354chr19_11870403_+ncRNA_intronic
CAediting_1299355chr19_11870404_+ncRNA_intronic
CAediting_1299356chr19_11870412_+ncRNA_intronic
CAediting_1299357chr19_11870415_+ncRNA_intronic
CAediting_1299358chr19_11870416_+ncRNA_intronic
CAediting_1299359chr19_11870426_+ncRNA_intronic
CAediting_1299360chr19_11870455_+ncRNA_intronic
CAediting_1299361chr19_11870459_+ncRNA_intronic
CAediting_1299362chr19_11870481_+ncRNA_intronic
CAediting_1299363chr19_11870482_+ncRNA_intronic
CAediting_1299364chr19_11870487_+ncRNA_intronic
CAediting_1299365chr19_11870491_+ncRNA_intronic
CAediting_1299366chr19_11870495_+ncRNA_intronic
CAediting_1299367chr19_11870504_+ncRNA_intronic
CAediting_1299368chr19_11870508_+ncRNA_intronic
CAediting_1299369chr19_11870517_+ncRNA_intronic
CAediting_1299370chr19_11870530_+ncRNA_intronic
CAediting_1299371chr19_11870534_+ncRNA_intronic
CAediting_1299372chr19_11870536_+ncRNA_intronic
CAediting_1299373chr19_11870543_+ncRNA_intronic
CAediting_1299374chr19_11870547_+ncRNA_intronic
CAediting_1299375chr19_11870554_+ncRNA_intronic
CAediting_1299376chr19_11870582_+ncRNA_intronic
CAediting_1299377chr19_11870592_+ncRNA_intronic
CAediting_1299378chr19_11870593_+ncRNA_intronic
CAediting_1299379chr19_11871442_+ncRNA_intronic
CAediting_1299380chr19_11871447_+ncRNA_intronic
CAediting_1299381chr19_11873618_+ncRNA_intronic
CAediting_1299382chr19_11873727_+ncRNA_intronic
CAediting_1299383chr19_11874924_+ncRNA_intronic
CAediting_1299384chr19_11874925_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1299155chr19_11850093_+SINEAluAluSz
CAediting_1299156chr19_11850095_+SINEAluAluSz
CAediting_1299157chr19_11850130_+SINEAluAluSz
CAediting_1299158chr19_11850173_+SINEAluAluSz
CAediting_1299159chr19_11850174_+SINEAluAluSz
CAediting_1299160chr19_11850203_+SINEAluAluSz
CAediting_1299161chr19_11850215_+SINEAluAluSz
CAediting_1299162chr19_11850235_+SINEAluAluSz
CAediting_1299163chr19_11850254_+SINEAluAluSz
CAediting_1299164chr19_11850271_+SINEAluAluSz
CAediting_1299165chr19_11850283_+SINEAluAluSz
CAediting_1299166chr19_11850294_+SINEAluAluSz
CAediting_1299167chr19_11850334_+SINEAluAluSz
CAediting_1299168chr19_11850336_+SINEAluAluSz
CAediting_1299169chr19_11850759_+SINEAluAluSz
CAediting_1299170chr19_11850766_+SINEAluAluSz
CAediting_1299171chr19_11850774_+SINEAluAluSz
CAediting_1299172chr19_11850775_+SINEAluAluSz
CAediting_1299173chr19_11850780_+SINEAluAluSz
CAediting_1299174chr19_11850802_+SINEAluAluSz
CAediting_1299175chr19_11850815_+SINEAluAluSz
CAediting_1299176chr19_11850820_+SINEAluAluSz
CAediting_1299177chr19_11850844_+SINEAluAluSz
CAediting_1299178chr19_11850848_+SINEAluAluSz
CAediting_1299179chr19_11850853_+SINEAluAluSz
CAediting_1299180chr19_11850854_+SINEAluAluSz
CAediting_1299181chr19_11850868_+SINEAluAluSz
CAediting_1299182chr19_11850878_+SINEAluAluSz
CAediting_1299183chr19_11850879_+SINEAluAluSz
CAediting_1299184chr19_11850880_+SINEAluAluSz
CAediting_1299185chr19_11850881_+SINEAluAluSz
CAediting_1299186chr19_11850884_+SINEAluAluSz
CAediting_1299187chr19_11850910_+SINEAluAluSz
CAediting_1299188chr19_11850924_+SINEAluAluSz
CAediting_1299189chr19_11850942_+SINEAluAluSz
CAediting_1299190chr19_11850946_+SINEAluAluSz
CAediting_1299191chr19_11850952_+SINEAluAluSz
CAediting_1299192chr19_11850959_+SINEAluAluSz
CAediting_1299193chr19_11850963_+SINEAluAluSz
CAediting_1299194chr19_11850982_+SINEAluAluSz
CAediting_1299195chr19_11850997_+SINEAluAluSz
CAediting_1299196chr19_11851012_+SINEAluAluSz
CAediting_1299197chr19_11851014_+SINEAluAluSz
CAediting_1299198chr19_11851027_+SINEAluAluSz
CAediting_1299199chr19_11851037_+SINEAluAluSz
CAediting_1299200chr19_11851046_+SINEAluAluSz
CAediting_1299201chr19_11851713_+SINEAluAluJr
CAediting_1299202chr19_11851774_+SINEAluAluJr
CAediting_1299203chr19_11851778_+SINEAluAluJr
CAediting_1299204chr19_11851783_+SINEAluAluJr
CAediting_1299205chr19_11851886_+SINEAluAluJr
CAediting_1299206chr19_11852171_+SINEAluFLAM_C
CAediting_1299207chr19_11852187_+SINEAluFLAM_C
CAediting_1299208chr19_11852239_+SINEAluFLAM_C
CAediting_1299209chr19_11852579_+SINEAluAluSz
CAediting_1299210chr19_11852603_+SINEAluAluSz
CAediting_1299211chr19_11852610_+SINEAluAluSz
CAediting_1299212chr19_11852613_+SINEAluAluSz
CAediting_1299213chr19_11852614_+SINEAluAluSz
CAediting_1299214chr19_11852635_+SINEAluAluSz
CAediting_1299215chr19_11852636_+SINEAluAluSz
CAediting_1299216chr19_11852639_+SINEAluAluSz
CAediting_1299217chr19_11852649_+SINEAluAluSz
CAediting_1299218chr19_11852667_+SINEAluAluSz
CAediting_1299219chr19_11852675_+SINEAluAluSz
CAediting_1299220chr19_11852676_+SINEAluAluSz
CAediting_1299221chr19_11852690_+SINEAluAluSz
CAediting_1299222chr19_11852712_+SINEAluAluSz
CAediting_1299223chr19_11852745_+SINEAluAluSz
CAediting_1299224chr19_11852757_+SINEAluAluSz
CAediting_1299225chr19_11852771_+SINEAluAluSz
CAediting_1299226chr19_11852772_+SINEAluAluSz
CAediting_1299227chr19_11852784_+SINEAluAluSz
CAediting_1299228chr19_11852985_+SINEAluAluSq4
CAediting_1299229chr19_11852994_+SINEAluAluSq4
CAediting_1299230chr19_11853023_+SINEAluAluSq4
CAediting_1299231chr19_11853029_+SINEAluAluSq4
CAediting_1299232chr19_11853030_+SINEAluAluSq4
CAediting_1299233chr19_11853059_+SINEAluAluSq4
CAediting_1299234chr19_11853069_+SINEAluAluSq4
CAediting_1299235chr19_11853113_+SINEAluAluSq4
CAediting_1299236chr19_11853130_+SINEAluAluSq4
CAediting_1299237chr19_11853191_+SINEAluAluSq4
CAediting_1299238chr19_11853203_+SINEAluAluSq4
CAediting_1299239chr19_11854482_+SINEAluAluSg
CAediting_1299240chr19_11854548_+SINEAluAluSg
CAediting_1299241chr19_11854737_+SINEAluAluSg
CAediting_1299242chr19_11858345_+SINEAluAluY
CAediting_1299243chr19_11858387_+SINEAluAluY
CAediting_1299244chr19_11858394_+SINEAluAluY
CAediting_1299245chr19_11858411_+SINEAluAluY
CAediting_1299246chr19_11860195_+SINEAluAluYb8
CAediting_1299247chr19_11860230_+SINEAluAluYb8
CAediting_1299248chr19_11860238_+SINEAluAluYb8
CAediting_1299249chr19_11860239_+SINEAluAluYb8
CAediting_1299250chr19_11862910_+SINEAluAluSq2
CAediting_1299251chr19_11862939_+SINEAluAluSq2
CAediting_1299252chr19_11863366_+SINEAluAluSx
CAediting_1299253chr19_11863412_+SINEAluAluSx
CAediting_1299254chr19_11863924_+SINEAluAluJo
CAediting_1299255chr19_11864329_+SINEAluAluSz
CAediting_1299256chr19_11864346_+SINEAluAluSz
CAediting_1299257chr19_11864399_+SINEAluAluSz
CAediting_1299258chr19_11864410_+SINEAluAluSz
CAediting_1299259chr19_11864415_+SINEAluAluSz
CAediting_1299260chr19_11864423_+SINEAluAluSz
CAediting_1299261chr19_11864424_+SINEAluAluSz
CAediting_1299262chr19_11864427_+SINEAluAluSz
CAediting_1299263chr19_11864428_+SINEAluAluSz
CAediting_1299264chr19_11864432_+SINEAluAluSz
CAediting_1299265chr19_11864439_+SINEAluAluSz
CAediting_1299266chr19_11864443_+SINEAluAluSz
CAediting_1299267chr19_11864462_+SINEAluAluSz
CAediting_1299268chr19_11864480_+SINEAluAluSz
CAediting_1299269chr19_11864482_+SINEAluAluSz
CAediting_1299270chr19_11864494_+SINEAluAluSz
CAediting_1299271chr19_11864502_+SINEAluAluSz
CAediting_1299272chr19_11864506_+SINEAluAluSz
CAediting_1299273chr19_11864517_+SINEAluAluSz
CAediting_1299274chr19_11864540_+SINEAluAluSz
CAediting_1299275chr19_11864559_+SINEAluAluSz
CAediting_1299276chr19_11864825_+SINEAluAluSp
CAediting_1299277chr19_11864856_+SINEAluAluSp
CAediting_1299278chr19_11864858_+SINEAluAluSp
CAediting_1299279chr19_11864869_+SINEAluAluSp
CAediting_1299280chr19_11864881_+SINEAluAluSp
CAediting_1299281chr19_11864884_+SINEAluAluSp
CAediting_1299282chr19_11864898_+SINEAluAluSp
CAediting_1299283chr19_11864910_+SINEAluAluSp
CAediting_1299284chr19_11864946_+SINEAluAluSp
CAediting_1299285chr19_11864947_+SINEAluAluSp
CAediting_1299286chr19_11864954_+SINEAluAluSp
CAediting_1299287chr19_11864960_+SINEAluAluSp
CAediting_1299288chr19_11864969_+SINEAluAluSp
CAediting_1299289chr19_11864970_+SINEAluAluSp
CAediting_1299290chr19_11865001_+SINEAluAluSp
CAediting_1299291chr19_11865041_+SINEAluAluSp
CAediting_1299292chr19_11865042_+SINEAluAluSp
CAediting_1299293chr19_11865054_+SINEAluAluSp
CAediting_1299294chr19_11865799_+SINEAluAluSp
CAediting_1299295chr19_11865813_+SINEAluAluSp
CAediting_1299296chr19_11865838_+SINEAluAluSp
CAediting_1299297chr19_11865852_+SINEAluAluSp
CAediting_1299298chr19_11865863_+SINEAluAluSp
CAediting_1299299chr19_11865867_+SINEAluAluSp
CAediting_1299300chr19_11865870_+SINEAluAluSp
CAediting_1299301chr19_11865872_+SINEAluAluSp
CAediting_1299302chr19_11865875_+SINEAluAluSp
CAediting_1299303chr19_11865876_+SINEAluAluSp
CAediting_1299304chr19_11865877_+SINEAluAluSp
CAediting_1299305chr19_11865880_+SINEAluAluSp
CAediting_1299306chr19_11865906_+SINEAluAluSp
CAediting_1299307chr19_11865907_+SINEAluAluSp
CAediting_1299308chr19_11865912_+SINEAluAluSp
CAediting_1299309chr19_11865916_+SINEAluAluSp
CAediting_1299310chr19_11865923_+SINEAluAluSp
CAediting_1299311chr19_11865972_+SINEAluAluSp
CAediting_1299312chr19_11865985_+SINEAluAluSp
CAediting_1299313chr19_11866004_+SINEAluAluSp
CAediting_1299314chr19_11866005_+SINEAluAluSp
CAediting_1299315chr19_11869679_+SINEAluAluSx3
CAediting_1299316chr19_11869680_+SINEAluAluSx3
CAediting_1299317chr19_11869688_+SINEAluAluSx3
CAediting_1299318chr19_11869700_+SINEAluAluSx3
CAediting_1299319chr19_11869712_+SINEAluAluSx3
CAediting_1299320chr19_11869721_+SINEAluAluSx3
CAediting_1299321chr19_11869731_+SINEAluAluSx3
CAediting_1299322chr19_11869736_+SINEAluAluSx3
CAediting_1299323chr19_11869737_+SINEAluAluSx3
CAediting_1299324chr19_11869750_+SINEAluAluSx3
CAediting_1299325chr19_11869758_+SINEAluAluSx3
CAediting_1299326chr19_11869760_+SINEAluAluSx3
CAediting_1299327chr19_11869774_+SINEAluAluSx3
CAediting_1299328chr19_11869783_+SINEAluAluSx3
CAediting_1299329chr19_11869786_+SINEAluAluSx3
CAediting_1299330chr19_11869796_+SINEAluAluSx3
CAediting_1299331chr19_11869832_+SINEAluAluSx3
CAediting_1299332chr19_11869839_+SINEAluAluSx3
CAediting_1299333chr19_11869842_+SINEAluAluSx3
CAediting_1299334chr19_11869846_+SINEAluAluSx3
CAediting_1299335chr19_11869856_+SINEAluAluSx3
CAediting_1299336chr19_11869859_+SINEAluAluSx3
CAediting_1299337chr19_11869861_+SINEAluAluSx3
CAediting_1299338chr19_11869868_+SINEAluAluSx3
CAediting_1299339chr19_11869896_+SINEAluAluSx3
CAediting_1299340chr19_11869918_+SINEAluAluSx3
CAediting_1299341chr19_11869919_+SINEAluAluSx3
CAediting_1299342chr19_11869931_+SINEAluAluSx3
CAediting_1299343chr19_11869937_+SINEAluAluSx3
CAediting_1299344chr19_11870340_+SINEAluAluSq2
CAediting_1299345chr19_11870345_+SINEAluAluSq2
CAediting_1299346chr19_11870346_+SINEAluAluSq2
CAediting_1299347chr19_11870347_+SINEAluAluSq2
CAediting_1299348chr19_11870348_+SINEAluAluSq2
CAediting_1299349chr19_11870352_+SINEAluAluSq2
CAediting_1299350chr19_11870355_+SINEAluAluSq2
CAediting_1299351chr19_11870357_+SINEAluAluSq2
CAediting_1299352chr19_11870377_+SINEAluAluSq2
CAediting_1299353chr19_11870401_+SINEAluAluSq2
CAediting_1299354chr19_11870403_+SINEAluAluSq2
CAediting_1299355chr19_11870404_+SINEAluAluSq2
CAediting_1299356chr19_11870412_+SINEAluAluSq2
CAediting_1299357chr19_11870415_+SINEAluAluSq2
CAediting_1299358chr19_11870416_+SINEAluAluSq2
CAediting_1299359chr19_11870426_+SINEAluAluSq2
CAediting_1299360chr19_11870455_+SINEAluAluSq2
CAediting_1299361chr19_11870459_+SINEAluAluSq2
CAediting_1299362chr19_11870481_+SINEAluAluSq2
CAediting_1299363chr19_11870482_+SINEAluAluSq2
CAediting_1299364chr19_11870487_+SINEAluAluSq2
CAediting_1299365chr19_11870491_+SINEAluAluSq2
CAediting_1299366chr19_11870495_+SINEAluAluSq2
CAediting_1299367chr19_11870504_+SINEAluAluSq2
CAediting_1299368chr19_11870508_+SINEAluAluSq2
CAediting_1299369chr19_11870517_+SINEAluAluSq2
CAediting_1299370chr19_11870530_+SINEAluAluSq2
CAediting_1299371chr19_11870534_+SINEAluAluSq2
CAediting_1299372chr19_11870536_+SINEAluAluSq2
CAediting_1299373chr19_11870543_+SINEAluAluSq2
CAediting_1299374chr19_11870547_+SINEAluAluSq2
CAediting_1299375chr19_11870554_+SINEAluAluSq2
CAediting_1299376chr19_11870582_+SINEAluAluSq2
CAediting_1299377chr19_11870592_+SINEAluAluSq2
CAediting_1299378chr19_11870593_+SINEAluAluSq2
CAediting_1299379chr19_11871442_+SINEAluAluSz
CAediting_1299380chr19_11871447_+SINEAluAluSz
CAediting_1299381chr19_11873618_+SINEAluAluSz6
CAediting_1299382chr19_11873727_+SINEAluAluSz6
CAediting_1299383chr19_11874924_+SINEAluAluSz
CAediting_1299384chr19_11874925_+SINEAluAluSz

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RNA A-to-I editing events in the alternative splicing sites for ZNF439

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000171291.7.ZNF439.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000171291.7.ZNF439.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF439

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
SKCM.CAediting_1299363.ENSG00000171291.ZNF439.png
Soverview

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Protein coding region RNA A-to-I editings for ZNF439

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for ZNF439

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000171291.7ENST00000455282hsa-miR-561-3p11868724118687318mer-1a1186871011868731142-12.92
CAediting_228905chr2_188297554_+ENSG00000171291.7ENST00000455282hsa-miR-561-3p11869308118693158mer-1a1186929411869315140-9.53
CAediting_396018chr5_1062918_-ENSG00000171291.7ENST00000455282hsa-miR-463511869267118692748mer-1a1186925511869274145-14.41
CAediting_228905chr2_188297554_+ENSG00000171291.7ENST00000304030hsa-miR-561-3p11868724118687318mer-1a1186871011868731142-12.92
CAediting_228905chr2_188297554_+ENSG00000171291.7ENST00000304030hsa-miR-561-3p11869308118693158mer-1a1186929411869315140-9.53
CAediting_396018chr5_1062918_-ENSG00000171291.7ENST00000304030hsa-miR-463511869267118692748mer-1a1186925511869274145-14.41

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF439

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for ZNF439

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_1299348chr19_11870348_+..0.03003573102373410.208893400035298..
BRCACAediting_1299348chr19_11870348_+0.01054853614771270.193984459892417....
BLCACAediting_1299362chr19_11870481_+0.00493276904972270.352674170693809....
BRCACAediting_1299362chr19_11870481_+0.01593418787279270.226319155715353....
THYMCAediting_1299363chr19_11870482_+0.0240262574082280.2404627489263570.0002644872504206830.3796224401831080.01340135741120350.262722342789766
LGGCAediting_1299365chr19_11870491_+..6.92283054720276e-060.5220990358669890.04960947528201380.242678364915023
LGGCAediting_1299366chr19_11870495_+..0.0001574991297251170.445616525328664..
THCACAediting_1299366chr19_11870495_+....0.0002360280552340880.450805416258088
LGGCAediting_1299371chr19_11870534_+..0.003490068198447550.362646315899827..
THCACAediting_1299371chr19_11870534_+0.02045656823970020.3147239205106....

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Relation with cancer stages for ZNF439

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ZNF439

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
UCECCAediting_1299363chr19_11870482_+0.003150456856478410.02706999.9524

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RelatedDrugs for ZNF439

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ZNF439

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource