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Editing gene: NFS1 (CAeditome ID:9054)

Gene summary for NFS1

Gene summary

Gene information	Gene symbol	NFS1
	Gene ID	9054
	Gene name	NFS1 cysteine desulfurase
	Synonyms	HUSSY-08\|IscS\|NIFS
	Cytomap	20q11.22
	Type of gene	protein-coding
	Description	cysteine desulfurase, mitochondrialNFS1 nitrogen fixation 1 homolognitrogen fixation 1 (S. cerevisiae, homolog)nitrogen-fixing bacteria S-like protein
	Modification date	20210518
	UniProtAcc	Q9Y697
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
NFS1	GO:0031071	Cysteine desulfurase, mitochondrial	16527810
NFS1	GO:0042803	Cysteine desulfurase, mitochondrial	16527810
NFS1	GO:0018283	Cysteine desulfurase, mitochondrial	16847322
NFS1	GO:0005634	Cysteine desulfurase, mitochondrial	16847322
NFS1	GO:0005654	Cysteine desulfurase, mitochondrial	0000052
NFS1	GO:0005739	Cysteine desulfurase, mitochondrial	26702583
NFS1	GO:0005759	Cysteine desulfurase, mitochondrial	16847322
NFS1	GO:0005829	Cysteine desulfurase, mitochondrial	0000052
NFS1	GO:0005829	Cysteine desulfurase, mitochondrial	16527810

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RNA A-to-I events for NFS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000244005.11

RNA A-to-I editing events in Cancer.

CAediting_1421043(35675604, -), CAediting_1421044(35675606, -), CAediting_1421045(35675612, -), CAediting_1421046(35675622, -), CAediting_1421047(35675672, -), CAediting_1421048(35675673, -), CAediting_1421049(35675685, -), CAediting_1421050(35675697, -), CAediting_1421051(35675705, -), CAediting_1421052(35675709, -), CAediting_1421053(35675711, -), CAediting_1421054(35675720, -), CAediting_1421055(35675728, -), CAediting_1421056(35675739, -), CAediting_1421057(35675755, -), CAediting_1421058(35675765, -), CAediting_1421059(35675819, -), CAediting_1421060(35675833, -), CAediting_1421061(35675852, -), CAediting_1421062(35676029, -), CAediting_1421063(35676083, -), CAediting_1421064(35676115, -), CAediting_1421065(35676163, -), CAediting_1421066(35676173, -), CAediting_1421067(35676185, -), CAediting_1421068(35676202, -), CAediting_1421069(35676203, -), CAediting_1421070(35676208, -), CAediting_1421071(35676233, -), CAediting_1421072(35676344, -), CAediting_1421073(35676369, -), CAediting_1421074(35676381, -), CAediting_1421075(35676509, -), CAediting_1421076(35676540, -), CAediting_1421077(35676875, -), CAediting_1421078(35676896, -), CAediting_1421079(35676897, -), CAediting_1421080(35676905, -), CAediting_1421081(35676934, -), CAediting_1421082(35676939, -), CAediting_1421083(35676956, -), CAediting_1421084(35676957, -), CAediting_1421085(35676963, -), CAediting_1421086(35676964, -), CAediting_1421087(35676982, -), CAediting_1421088(35676991, -), CAediting_1421089(35676994, -), CAediting_1421090(35676995, -), CAediting_1421091(35676999, -), CAediting_1421092(35677004, -), CAediting_1421093(35677005, -), CAediting_1421094(35677027, -), CAediting_1421095(35677031, -), CAediting_1421096(35677035, -), CAediting_1421097(35677037, -), CAediting_1421098(35677040, -), CAediting_1421099(35677044, -), CAediting_1421100(35677060, -), CAediting_1421101(35677070, -), CAediting_1421102(35677085, -), CAediting_1421103(35677094, -), CAediting_1421104(35677137, -), CAediting_1421105(35677138, -), CAediting_1421106(35677352, -), CAediting_1421107(35677364, -), CAediting_1421108(35677411, -), CAediting_1421109(35677414, -), CAediting_1421110(35677424, -), CAediting_1421111(35677449, -), CAediting_1421112(35677453, -), CAediting_1421113(35677460, -), CAediting_1421114(35677484, -), CAediting_1421115(35677486, -), CAediting_1421116(35677492, -), CAediting_1421117(35677526, -), CAediting_1421118(35677533, -), CAediting_1421119(35677534, -), CAediting_1421120(35677806, -), CAediting_1421121(35677812, -), CAediting_1421122(35677834, -), CAediting_1421123(35677876, -), CAediting_1421124(35677884, -), CAediting_1421125(35677891, -), CAediting_1421126(35677893, -), CAediting_1421127(35677897, -), CAediting_1421128(35677899, -), CAediting_1421129(35677920, -), CAediting_1421130(35677948, -), CAediting_1421131(35677956, -), CAediting_1421132(35677968, -), CAediting_1421133(35677969, -), CAediting_1421134(35678042, -), CAediting_1421135(35678160, -), CAediting_1421136(35678231, -), CAediting_1421137(35678233, -), CAediting_1421138(35678243, -), CAediting_1421139(35678247, -), CAediting_1421140(35678308, -), CAediting_1421141(35678319, -), CAediting_1421142(35678361, -), CAediting_1421143(35678579, -), CAediting_1421144(35678581, -), CAediting_1421145(35678591, -), CAediting_1421146(35678603, -), CAediting_1421147(35678621, -), CAediting_1421148(35678627, -), CAediting_1421149(35678640, -), CAediting_1421150(35678656, -), CAediting_1421151(35678689, -), CAediting_1421152(35678696, -), CAediting_1421153(35678701, -), CAediting_1421154(35678743, -), CAediting_1421155(35678776, -), CAediting_1421156(35678799, -), CAediting_1421157(35678812, -), CAediting_1421158(35678845, -), CAediting_1421159(35678852, -), CAediting_1421160(35679244, -), CAediting_1421161(35679256, -), CAediting_1421162(35679267, -), CAediting_1421163(35679269, -), CAediting_1421164(35679276, -), CAediting_1421165(35679280, -), CAediting_1421166(35679281, -), CAediting_1421167(35679305, -), CAediting_1421168(35679308, -), CAediting_1421169(35679312, -), CAediting_1421170(35679316, -), CAediting_1421171(35679321, -), CAediting_1421172(35679322, -), CAediting_1421173(35679348, -), CAediting_1421174(35679353, -), CAediting_1421175(35679357, -), CAediting_1421176(35679362, -), CAediting_1421177(35679403, -), CAediting_1421178(35679411, -), CAediting_1421179(35679437, -), CAediting_1421180(35680060, -), CAediting_1421181(35680115, -), CAediting_1421182(35684280, -), CAediting_1421183(35684548, -), CAediting_1421184(35684578, -), CAediting_1421185(35684584, -), CAediting_1421186(35684663, -), CAediting_1421187(35684666, -), CAediting_1421188(35684667, -), CAediting_1421189(35684813, -), CAediting_1421190(35684829, -), CAediting_1421191(35685083, -), CAediting_1421192(35685251, -), CAediting_1421193(35685263, -), CAediting_1421194(35685295, -), CAediting_1421195(35685406, -), CAediting_1421196(35685445, -), CAediting_1421197(35685446, -), CAediting_1421198(35685806, -), CAediting_1421199(35691846, -), CAediting_1421200(35692017, -), CAediting_1421201(35692252, -), CAediting_1421202(35692262, -), CAediting_1421203(35692292, -), CAediting_1421204(35692327, -), CAediting_1421205(35692343, -), CAediting_1421206(35692488, -), CAediting_1421207(35692596, -), CAediting_1421208(35692613, -), CAediting_1421209(35692643, -), CAediting_1421210(35692654, -), CAediting_1421211(35692685, -), CAediting_1421212(35692691, -), CAediting_1421213(35692767, -), CAediting_1421214(35692785, -), CAediting_1421215(35692799, -), CAediting_1421216(35692853, -), CAediting_1421217(35693135, -), CAediting_1421218(35693163, -), CAediting_1421219(35693199, -), CAediting_1421220(35693200, -), CAediting_1421221(35693213, -), CAediting_1421222(35693260, -), CAediting_1421223(35693263, -), CAediting_1421224(35693264, -), CAediting_1421225(35693268, -), CAediting_1421226(35693270, -), CAediting_1421227(35693272, -), CAediting_1421228(35693273, -), CAediting_1421229(35693274, -), CAediting_1421230(35693277, -), CAediting_1421231(35693280, -), CAediting_1421232(35693286, -), CAediting_1421233(35693301, -), CAediting_1421234(35693340, -), CAediting_1421235(35693365, -), CAediting_1421236(35693387, -), CAediting_1421237(35693571, -), CAediting_1421238(35693583, -), CAediting_1421239(35693584, -), CAediting_1421240(35693707, -), CAediting_1421241(35693774, -), CAediting_1421242(35693796, -), CAediting_1421243(35693799, -), CAediting_1421244(35693813, -), CAediting_1421245(35693814, -), CAediting_1421246(35693846, -), CAediting_1421247(35694037, -), CAediting_1421248(35694051, -), CAediting_1421249(35694060, -), CAediting_1421250(35694063, -), CAediting_1421251(35694064, -), CAediting_1421252(35694094, -), CAediting_1421253(35694120, -), CAediting_1421254(35694172, -), CAediting_1421255(35694206, -), CAediting_1421256(35694215, -), CAediting_1421257(35694247, -), CAediting_1421258(35694250, -), CAediting_1421259(35694266, -), CAediting_1421260(35694283, -), CAediting_1421261(35694315, -), CAediting_1421262(35694327, -), CAediting_1421263(35694341, -), CAediting_1421264(35694348, -), CAediting_1421265(35694387, -), CAediting_1421266(35694393, -), CAediting_1421267(35694409, -), CAediting_1421268(35694412, -), CAediting_1421269(35694417, -), CAediting_1421270(35694696, -), CAediting_1421271(35694700, -), CAediting_1421272(35694708, -), CAediting_1421273(35694716, -), CAediting_1421274(35694720, -), CAediting_1421275(35694722, -), CAediting_1421276(35694725, -), CAediting_1421277(35694731, -), CAediting_1421278(35694740, -), CAediting_1421279(35694741, -), CAediting_1421280(35694765, -), CAediting_1421281(35694767, -), CAediting_1421282(35694777, -), CAediting_1421283(35694789, -), CAediting_1421284(35694802, -), CAediting_1421285(35694807, -), CAediting_1421286(35694826, -), CAediting_1421287(35694842, -), CAediting_1421288(35694875, -), CAediting_1421289(35694881, -), CAediting_1421290(35696944, -),

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RNA editing positional annotations for NFS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1421277	chr20_35694731_-	nonsynonymous SNV	ENST00000306750.3	c.A563G	p.Y188C	D	D	N
CAediting_1421278	chr20_35694740_-	nonsynonymous SNV	ENST00000306750.3	c.A554G	p.N185S	D	B	N
CAediting_1421279	chr20_35694741_-	nonsynonymous SNV	ENST00000306750.3	c.A553G	p.N185D	D	B	N
CAediting_1421280	chr20_35694765_-	nonsynonymous SNV	ENST00000306750.3	c.A529G	p.R177G	D	B	N
CAediting_1421281	chr20_35694767_-	nonsynonymous SNV	ENST00000306750.3	c.A527G	p.Y176C	D	P	N
CAediting_1421285	chr20_35694807_-	nonsynonymous SNV	ENST00000306750.3	c.A487G	p.T163A	D	B	N
CAediting_1421287	chr20_35694842_-	nonsynonymous SNV	ENST00000306750.3	c.A452G	p.D151G	D	D	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1421043	chr20_35675604_-	ncRNA_exonic
CAediting_1421044	chr20_35675606_-	ncRNA_exonic
CAediting_1421045	chr20_35675612_-	ncRNA_exonic
CAediting_1421046	chr20_35675622_-	ncRNA_exonic
CAediting_1421047	chr20_35675672_-	ncRNA_exonic
CAediting_1421048	chr20_35675673_-	ncRNA_exonic
CAediting_1421049	chr20_35675685_-	ncRNA_exonic
CAediting_1421050	chr20_35675697_-	ncRNA_exonic
CAediting_1421051	chr20_35675705_-	ncRNA_exonic
CAediting_1421052	chr20_35675709_-	ncRNA_exonic
CAediting_1421053	chr20_35675711_-	ncRNA_exonic
CAediting_1421054	chr20_35675720_-	ncRNA_exonic
CAediting_1421055	chr20_35675728_-	ncRNA_exonic
CAediting_1421056	chr20_35675739_-	ncRNA_exonic
CAediting_1421057	chr20_35675755_-	ncRNA_exonic
CAediting_1421058	chr20_35675765_-	ncRNA_exonic
CAediting_1421059	chr20_35675819_-	ncRNA_exonic
CAediting_1421060	chr20_35675833_-	ncRNA_exonic
CAediting_1421061	chr20_35675852_-	ncRNA_exonic
CAediting_1421062	chr20_35676029_-	ncRNA_exonic
CAediting_1421063	chr20_35676083_-	ncRNA_exonic
CAediting_1421064	chr20_35676115_-	ncRNA_exonic
CAediting_1421065	chr20_35676163_-	ncRNA_exonic
CAediting_1421066	chr20_35676173_-	ncRNA_exonic
CAediting_1421067	chr20_35676185_-	ncRNA_exonic
CAediting_1421068	chr20_35676202_-	ncRNA_intronic
CAediting_1421069	chr20_35676203_-	ncRNA_intronic
CAediting_1421070	chr20_35676208_-	ncRNA_intronic
CAediting_1421071	chr20_35676233_-	ncRNA_intronic
CAediting_1421072	chr20_35676344_-	ncRNA_intronic
CAediting_1421073	chr20_35676369_-	ncRNA_intronic
CAediting_1421074	chr20_35676381_-	ncRNA_intronic
CAediting_1421075	chr20_35676509_-	ncRNA_intronic
CAediting_1421076	chr20_35676540_-	ncRNA_intronic
CAediting_1421077	chr20_35676875_-	ncRNA_intronic
CAediting_1421078	chr20_35676896_-	ncRNA_intronic
CAediting_1421079	chr20_35676897_-	ncRNA_intronic
CAediting_1421080	chr20_35676905_-	ncRNA_intronic
CAediting_1421081	chr20_35676934_-	ncRNA_intronic
CAediting_1421082	chr20_35676939_-	ncRNA_intronic
CAediting_1421083	chr20_35676956_-	ncRNA_intronic
CAediting_1421084	chr20_35676957_-	ncRNA_intronic
CAediting_1421085	chr20_35676963_-	ncRNA_intronic
CAediting_1421086	chr20_35676964_-	ncRNA_intronic
CAediting_1421087	chr20_35676982_-	ncRNA_intronic
CAediting_1421088	chr20_35676991_-	ncRNA_intronic
CAediting_1421089	chr20_35676994_-	ncRNA_intronic
CAediting_1421090	chr20_35676995_-	ncRNA_intronic
CAediting_1421091	chr20_35676999_-	ncRNA_intronic
CAediting_1421092	chr20_35677004_-	ncRNA_intronic
CAediting_1421093	chr20_35677005_-	ncRNA_intronic
CAediting_1421094	chr20_35677027_-	ncRNA_intronic
CAediting_1421095	chr20_35677031_-	ncRNA_intronic
CAediting_1421096	chr20_35677035_-	ncRNA_intronic
CAediting_1421097	chr20_35677037_-	ncRNA_intronic
CAediting_1421098	chr20_35677040_-	ncRNA_intronic
CAediting_1421099	chr20_35677044_-	ncRNA_intronic
CAediting_1421100	chr20_35677060_-	ncRNA_intronic
CAediting_1421101	chr20_35677070_-	ncRNA_intronic
CAediting_1421102	chr20_35677085_-	ncRNA_intronic
CAediting_1421103	chr20_35677094_-	ncRNA_intronic
CAediting_1421104	chr20_35677137_-	ncRNA_intronic
CAediting_1421105	chr20_35677138_-	ncRNA_intronic
CAediting_1421106	chr20_35677352_-	ncRNA_intronic
CAediting_1421107	chr20_35677364_-	ncRNA_intronic
CAediting_1421108	chr20_35677411_-	ncRNA_intronic
CAediting_1421109	chr20_35677414_-	ncRNA_intronic
CAediting_1421110	chr20_35677424_-	ncRNA_intronic
CAediting_1421111	chr20_35677449_-	ncRNA_intronic
CAediting_1421112	chr20_35677453_-	ncRNA_intronic
CAediting_1421113	chr20_35677460_-	ncRNA_intronic
CAediting_1421114	chr20_35677484_-	ncRNA_intronic
CAediting_1421115	chr20_35677486_-	ncRNA_intronic
CAediting_1421116	chr20_35677492_-	ncRNA_intronic
CAediting_1421117	chr20_35677526_-	ncRNA_intronic
CAediting_1421118	chr20_35677533_-	ncRNA_intronic
CAediting_1421119	chr20_35677534_-	ncRNA_intronic
CAediting_1421120	chr20_35677806_-	ncRNA_intronic
CAediting_1421121	chr20_35677812_-	ncRNA_intronic
CAediting_1421122	chr20_35677834_-	ncRNA_intronic
CAediting_1421123	chr20_35677876_-	ncRNA_intronic
CAediting_1421124	chr20_35677884_-	ncRNA_intronic
CAediting_1421125	chr20_35677891_-	ncRNA_intronic
CAediting_1421126	chr20_35677893_-	ncRNA_intronic
CAediting_1421127	chr20_35677897_-	ncRNA_intronic
CAediting_1421128	chr20_35677899_-	ncRNA_intronic
CAediting_1421129	chr20_35677920_-	ncRNA_intronic
CAediting_1421130	chr20_35677948_-	ncRNA_intronic
CAediting_1421131	chr20_35677956_-	ncRNA_intronic
CAediting_1421132	chr20_35677968_-	ncRNA_intronic
CAediting_1421133	chr20_35677969_-	ncRNA_intronic
CAediting_1421134	chr20_35678042_-	ncRNA_intronic
CAediting_1421135	chr20_35678160_-	ncRNA_intronic
CAediting_1421136	chr20_35678231_-	ncRNA_intronic
CAediting_1421137	chr20_35678233_-	ncRNA_intronic
CAediting_1421138	chr20_35678243_-	ncRNA_intronic
CAediting_1421139	chr20_35678247_-	ncRNA_intronic
CAediting_1421140	chr20_35678308_-	ncRNA_intronic
CAediting_1421141	chr20_35678319_-	ncRNA_intronic
CAediting_1421142	chr20_35678361_-	ncRNA_intronic
CAediting_1421143	chr20_35678579_-	ncRNA_intronic
CAediting_1421144	chr20_35678581_-	ncRNA_intronic
CAediting_1421145	chr20_35678591_-	ncRNA_intronic
CAediting_1421146	chr20_35678603_-	ncRNA_intronic
CAediting_1421147	chr20_35678621_-	ncRNA_intronic
CAediting_1421148	chr20_35678627_-	ncRNA_intronic
CAediting_1421149	chr20_35678640_-	ncRNA_intronic
CAediting_1421150	chr20_35678656_-	ncRNA_intronic
CAediting_1421151	chr20_35678689_-	ncRNA_intronic
CAediting_1421152	chr20_35678696_-	ncRNA_intronic
CAediting_1421153	chr20_35678701_-	ncRNA_intronic
CAediting_1421154	chr20_35678743_-	ncRNA_intronic
CAediting_1421155	chr20_35678776_-	ncRNA_intronic
CAediting_1421156	chr20_35678799_-	ncRNA_intronic
CAediting_1421157	chr20_35678812_-	ncRNA_intronic
CAediting_1421158	chr20_35678845_-	ncRNA_intronic
CAediting_1421159	chr20_35678852_-	ncRNA_intronic
CAediting_1421160	chr20_35679244_-	ncRNA_intronic
CAediting_1421161	chr20_35679256_-	ncRNA_intronic
CAediting_1421162	chr20_35679267_-	ncRNA_intronic
CAediting_1421163	chr20_35679269_-	ncRNA_intronic
CAediting_1421164	chr20_35679276_-	ncRNA_intronic
CAediting_1421165	chr20_35679280_-	ncRNA_intronic
CAediting_1421166	chr20_35679281_-	ncRNA_intronic
CAediting_1421167	chr20_35679305_-	ncRNA_intronic
CAediting_1421168	chr20_35679308_-	ncRNA_intronic
CAediting_1421169	chr20_35679312_-	ncRNA_intronic
CAediting_1421170	chr20_35679316_-	ncRNA_intronic
CAediting_1421171	chr20_35679321_-	ncRNA_intronic
CAediting_1421172	chr20_35679322_-	ncRNA_intronic
CAediting_1421173	chr20_35679348_-	ncRNA_intronic
CAediting_1421174	chr20_35679353_-	ncRNA_intronic
CAediting_1421175	chr20_35679357_-	ncRNA_intronic
CAediting_1421176	chr20_35679362_-	ncRNA_intronic
CAediting_1421177	chr20_35679403_-	ncRNA_intronic
CAediting_1421178	chr20_35679411_-	ncRNA_intronic
CAediting_1421179	chr20_35679437_-	ncRNA_intronic
CAediting_1421180	chr20_35680060_-	ncRNA_intronic
CAediting_1421181	chr20_35680115_-	ncRNA_intronic
CAediting_1421182	chr20_35684280_-	intronic
CAediting_1421183	chr20_35684548_-	intronic
CAediting_1421184	chr20_35684578_-	intronic
CAediting_1421185	chr20_35684584_-	intronic
CAediting_1421186	chr20_35684663_-	intronic
CAediting_1421187	chr20_35684666_-	intronic
CAediting_1421188	chr20_35684667_-	intronic
CAediting_1421189	chr20_35684813_-	intronic
CAediting_1421190	chr20_35684829_-	intronic
CAediting_1421191	chr20_35685083_-	intronic
CAediting_1421192	chr20_35685251_-	intronic
CAediting_1421193	chr20_35685263_-	intronic
CAediting_1421194	chr20_35685295_-	intronic
CAediting_1421195	chr20_35685406_-	intronic
CAediting_1421196	chr20_35685445_-	intronic
CAediting_1421197	chr20_35685446_-	intronic
CAediting_1421198	chr20_35685806_-	intronic
CAediting_1421199	chr20_35691846_-	ncRNA_intronic
CAediting_1421200	chr20_35692017_-	ncRNA_intronic
CAediting_1421201	chr20_35692252_-	ncRNA_exonic
CAediting_1421202	chr20_35692262_-	ncRNA_exonic
CAediting_1421203	chr20_35692292_-	ncRNA_exonic
CAediting_1421204	chr20_35692327_-	ncRNA_intronic
CAediting_1421205	chr20_35692343_-	exonic
CAediting_1421206	chr20_35692488_-	ncRNA_intronic
CAediting_1421207	chr20_35692596_-	ncRNA_intronic
CAediting_1421208	chr20_35692613_-	ncRNA_intronic
CAediting_1421209	chr20_35692643_-	ncRNA_intronic
CAediting_1421210	chr20_35692654_-	ncRNA_intronic
CAediting_1421211	chr20_35692685_-	ncRNA_intronic
CAediting_1421212	chr20_35692691_-	ncRNA_intronic
CAediting_1421213	chr20_35692767_-	ncRNA_intronic
CAediting_1421214	chr20_35692785_-	ncRNA_intronic
CAediting_1421215	chr20_35692799_-	ncRNA_intronic
CAediting_1421216	chr20_35692853_-	ncRNA_intronic
CAediting_1421217	chr20_35693135_-	ncRNA_intronic
CAediting_1421218	chr20_35693163_-	ncRNA_intronic
CAediting_1421219	chr20_35693199_-	ncRNA_intronic
CAediting_1421220	chr20_35693200_-	ncRNA_intronic
CAediting_1421221	chr20_35693213_-	ncRNA_intronic
CAediting_1421222	chr20_35693260_-	ncRNA_intronic
CAediting_1421223	chr20_35693263_-	ncRNA_intronic
CAediting_1421224	chr20_35693264_-	ncRNA_intronic
CAediting_1421225	chr20_35693268_-	ncRNA_intronic
CAediting_1421226	chr20_35693270_-	ncRNA_intronic
CAediting_1421227	chr20_35693272_-	ncRNA_intronic
CAediting_1421228	chr20_35693273_-	ncRNA_intronic
CAediting_1421229	chr20_35693274_-	ncRNA_intronic
CAediting_1421230	chr20_35693277_-	ncRNA_intronic
CAediting_1421231	chr20_35693280_-	ncRNA_intronic
CAediting_1421232	chr20_35693286_-	ncRNA_intronic
CAediting_1421233	chr20_35693301_-	ncRNA_intronic
CAediting_1421234	chr20_35693340_-	ncRNA_intronic
CAediting_1421235	chr20_35693365_-	ncRNA_intronic
CAediting_1421236	chr20_35693387_-	ncRNA_intronic
CAediting_1421237	chr20_35693571_-	ncRNA_intronic
CAediting_1421238	chr20_35693583_-	ncRNA_intronic
CAediting_1421239	chr20_35693584_-	ncRNA_intronic
CAediting_1421240	chr20_35693707_-	ncRNA_intronic
CAediting_1421241	chr20_35693774_-	ncRNA_intronic
CAediting_1421242	chr20_35693796_-	ncRNA_intronic
CAediting_1421243	chr20_35693799_-	ncRNA_intronic
CAediting_1421244	chr20_35693813_-	ncRNA_intronic
CAediting_1421245	chr20_35693814_-	ncRNA_intronic
CAediting_1421246	chr20_35693846_-	ncRNA_intronic
CAediting_1421247	chr20_35694037_-	ncRNA_intronic
CAediting_1421248	chr20_35694051_-	ncRNA_intronic
CAediting_1421249	chr20_35694060_-	ncRNA_intronic
CAediting_1421250	chr20_35694063_-	ncRNA_intronic
CAediting_1421251	chr20_35694064_-	ncRNA_intronic
CAediting_1421252	chr20_35694094_-	ncRNA_intronic
CAediting_1421253	chr20_35694120_-	ncRNA_intronic
CAediting_1421254	chr20_35694172_-	ncRNA_intronic
CAediting_1421255	chr20_35694206_-	ncRNA_intronic
CAediting_1421256	chr20_35694215_-	ncRNA_intronic
CAediting_1421257	chr20_35694247_-	ncRNA_intronic
CAediting_1421258	chr20_35694250_-	ncRNA_intronic
CAediting_1421259	chr20_35694266_-	ncRNA_intronic
CAediting_1421260	chr20_35694283_-	ncRNA_intronic
CAediting_1421261	chr20_35694315_-	ncRNA_intronic
CAediting_1421262	chr20_35694327_-	ncRNA_intronic
CAediting_1421263	chr20_35694341_-	ncRNA_intronic
CAediting_1421264	chr20_35694348_-	ncRNA_intronic
CAediting_1421265	chr20_35694387_-	ncRNA_intronic
CAediting_1421266	chr20_35694393_-	ncRNA_intronic
CAediting_1421267	chr20_35694409_-	ncRNA_intronic
CAediting_1421268	chr20_35694412_-	ncRNA_intronic
CAediting_1421269	chr20_35694417_-	ncRNA_intronic
CAediting_1421270	chr20_35694696_-	ncRNA_intronic
CAediting_1421271	chr20_35694700_-	ncRNA_intronic
CAediting_1421272	chr20_35694708_-	ncRNA_intronic
CAediting_1421273	chr20_35694716_-	ncRNA_intronic
CAediting_1421274	chr20_35694720_-	ncRNA_intronic
CAediting_1421275	chr20_35694722_-	ncRNA_intronic
CAediting_1421276	chr20_35694725_-	exonic
CAediting_1421277	chr20_35694731_-	exonic
CAediting_1421278	chr20_35694740_-	exonic
CAediting_1421279	chr20_35694741_-	exonic
CAediting_1421280	chr20_35694765_-	exonic
CAediting_1421281	chr20_35694767_-	exonic
CAediting_1421282	chr20_35694777_-	exonic
CAediting_1421283	chr20_35694789_-	exonic
CAediting_1421284	chr20_35694802_-	exonic
CAediting_1421285	chr20_35694807_-	exonic
CAediting_1421286	chr20_35694826_-	exonic
CAediting_1421287	chr20_35694842_-	exonic
CAediting_1421288	chr20_35694875_-	exonic
CAediting_1421289	chr20_35694881_-	exonic
CAediting_1421290	chr20_35696944_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1421043	chr20_35675604_-	SINE	Alu	AluSx1
CAediting_1421044	chr20_35675606_-	SINE	Alu	AluSx1
CAediting_1421045	chr20_35675612_-	SINE	Alu	AluSx1
CAediting_1421046	chr20_35675622_-	SINE	Alu	AluSx1
CAediting_1421047	chr20_35675672_-	SINE	Alu	AluSx1
CAediting_1421048	chr20_35675673_-	SINE	Alu	AluSx1
CAediting_1421049	chr20_35675685_-	SINE	Alu	AluSx1
CAediting_1421050	chr20_35675697_-	SINE	Alu	AluSx1
CAediting_1421051	chr20_35675705_-	SINE	Alu	AluSx1
CAediting_1421052	chr20_35675709_-	SINE	Alu	AluSx1
CAediting_1421053	chr20_35675711_-	SINE	Alu	AluSx1
CAediting_1421054	chr20_35675720_-	SINE	Alu	AluSx1
CAediting_1421055	chr20_35675728_-	SINE	Alu	AluSx1
CAediting_1421056	chr20_35675739_-	SINE	Alu	AluSx1
CAediting_1421057	chr20_35675755_-	SINE	Alu	AluSx1
CAediting_1421058	chr20_35675765_-	SINE	Alu	AluSx1
CAediting_1421059	chr20_35675819_-	SINE	Alu	AluSx1
CAediting_1421060	chr20_35675833_-	SINE	Alu	AluSx1
CAediting_1421061	chr20_35675852_-	SINE	Alu	AluSx1
CAediting_1421062	chr20_35676029_-	SINE	Alu	AluSp
CAediting_1421063	chr20_35676083_-	SINE	Alu	AluSp
CAediting_1421064	chr20_35676115_-	SINE	Alu	AluSp
CAediting_1421065	chr20_35676163_-	SINE	Alu	AluSp
CAediting_1421066	chr20_35676173_-	SINE	Alu	AluSp
CAediting_1421067	chr20_35676185_-	SINE	Alu	AluSp
CAediting_1421068	chr20_35676202_-	SINE	Alu	AluSp
CAediting_1421069	chr20_35676203_-	SINE	Alu	AluSp
CAediting_1421070	chr20_35676208_-	SINE	Alu	AluSp
CAediting_1421071	chr20_35676233_-	SINE	Alu	AluSp
CAediting_1421072	chr20_35676344_-	SINE	Alu	AluSg
CAediting_1421073	chr20_35676369_-	SINE	Alu	AluSg
CAediting_1421074	chr20_35676381_-	SINE	Alu	AluSg
CAediting_1421075	chr20_35676509_-	SINE	Alu	AluSg
CAediting_1421076	chr20_35676540_-	SINE	Alu	AluSg
CAediting_1421077	chr20_35676875_-	SINE	Alu	AluSx1
CAediting_1421078	chr20_35676896_-	SINE	Alu	AluSx1
CAediting_1421079	chr20_35676897_-	SINE	Alu	AluSx1
CAediting_1421080	chr20_35676905_-	SINE	Alu	AluSx1
CAediting_1421081	chr20_35676934_-	SINE	Alu	AluSx1
CAediting_1421082	chr20_35676939_-	SINE	Alu	AluSx1
CAediting_1421083	chr20_35676956_-	SINE	Alu	AluSx1
CAediting_1421084	chr20_35676957_-	SINE	Alu	AluSx1
CAediting_1421085	chr20_35676963_-	SINE	Alu	AluSx1
CAediting_1421086	chr20_35676964_-	SINE	Alu	AluSx1
CAediting_1421087	chr20_35676982_-	SINE	Alu	AluSx1
CAediting_1421088	chr20_35676991_-	SINE	Alu	AluSx1
CAediting_1421089	chr20_35676994_-	SINE	Alu	AluSx1
CAediting_1421090	chr20_35676995_-	SINE	Alu	AluSx1
CAediting_1421091	chr20_35676999_-	SINE	Alu	AluSx1
CAediting_1421092	chr20_35677004_-	SINE	Alu	AluSx1
CAediting_1421093	chr20_35677005_-	SINE	Alu	AluSx1
CAediting_1421094	chr20_35677027_-	SINE	Alu	AluSx1
CAediting_1421095	chr20_35677031_-	SINE	Alu	AluSx1
CAediting_1421096	chr20_35677035_-	SINE	Alu	AluSx1
CAediting_1421097	chr20_35677037_-	SINE	Alu	AluSx1
CAediting_1421098	chr20_35677040_-	SINE	Alu	AluSx1
CAediting_1421099	chr20_35677044_-	SINE	Alu	AluSx1
CAediting_1421100	chr20_35677060_-	SINE	Alu	AluSx1
CAediting_1421101	chr20_35677070_-	SINE	Alu	AluSx1
CAediting_1421102	chr20_35677085_-	SINE	Alu	AluSx1
CAediting_1421103	chr20_35677094_-	SINE	Alu	AluSx1
CAediting_1421104	chr20_35677137_-	SINE	Alu	AluSx1
CAediting_1421105	chr20_35677138_-	SINE	Alu	AluSx1
CAediting_1421106	chr20_35677352_-	SINE	Alu	AluJr
CAediting_1421107	chr20_35677364_-	SINE	Alu	AluJr
CAediting_1421108	chr20_35677411_-	SINE	Alu	AluJr
CAediting_1421109	chr20_35677414_-	SINE	Alu	AluJr
CAediting_1421110	chr20_35677424_-	SINE	Alu	AluJr
CAediting_1421111	chr20_35677449_-	SINE	Alu	AluJr
CAediting_1421112	chr20_35677453_-	SINE	Alu	AluJr
CAediting_1421113	chr20_35677460_-	SINE	Alu	AluJr
CAediting_1421114	chr20_35677484_-	SINE	Alu	AluJr
CAediting_1421115	chr20_35677486_-	SINE	Alu	AluJr
CAediting_1421116	chr20_35677492_-	SINE	Alu	AluJr
CAediting_1421117	chr20_35677526_-	SINE	Alu	AluJr
CAediting_1421118	chr20_35677533_-	SINE	Alu	AluJr
CAediting_1421119	chr20_35677534_-	SINE	Alu	AluJr
CAediting_1421120	chr20_35677806_-	SINE	Alu	AluSz
CAediting_1421121	chr20_35677812_-	SINE	Alu	AluSz
CAediting_1421122	chr20_35677834_-	SINE	Alu	AluSz
CAediting_1421123	chr20_35677876_-	SINE	Alu	AluSz
CAediting_1421124	chr20_35677884_-	SINE	Alu	AluSz
CAediting_1421125	chr20_35677891_-	SINE	Alu	AluSz
CAediting_1421126	chr20_35677893_-	SINE	Alu	AluSz
CAediting_1421127	chr20_35677897_-	SINE	Alu	AluSz
CAediting_1421128	chr20_35677899_-	SINE	Alu	AluSz
CAediting_1421129	chr20_35677920_-	SINE	Alu	AluSz
CAediting_1421130	chr20_35677948_-	SINE	Alu	AluSq10
CAediting_1421131	chr20_35677956_-	SINE	Alu	AluSq10
CAediting_1421132	chr20_35677968_-	SINE	Alu	AluSq10
CAediting_1421133	chr20_35677969_-	SINE	Alu	AluSq10
CAediting_1421134	chr20_35678042_-	SINE	Alu	AluSq10
CAediting_1421135	chr20_35678160_-	SINE	Alu	AluY
CAediting_1421136	chr20_35678231_-	SINE	Alu	AluY
CAediting_1421137	chr20_35678233_-	SINE	Alu	AluY
CAediting_1421138	chr20_35678243_-	SINE	Alu	AluY
CAediting_1421139	chr20_35678247_-	SINE	Alu	AluY
CAediting_1421140	chr20_35678308_-	SINE	Alu	AluY
CAediting_1421141	chr20_35678319_-	SINE	Alu	AluY
CAediting_1421142	chr20_35678361_-	SINE	Alu	AluY
CAediting_1421143	chr20_35678579_-	SINE	Alu	AluSz
CAediting_1421144	chr20_35678581_-	SINE	Alu	AluSz
CAediting_1421145	chr20_35678591_-	SINE	Alu	AluSz
CAediting_1421146	chr20_35678603_-	SINE	Alu	AluSz
CAediting_1421147	chr20_35678621_-	SINE	Alu	AluSz
CAediting_1421148	chr20_35678627_-	SINE	Alu	AluSz
CAediting_1421149	chr20_35678640_-	SINE	Alu	AluSz
CAediting_1421150	chr20_35678656_-	SINE	Alu	AluSz
CAediting_1421151	chr20_35678689_-	SINE	Alu	AluSz
CAediting_1421152	chr20_35678696_-	SINE	Alu	AluSz
CAediting_1421153	chr20_35678701_-	SINE	Alu	AluSz
CAediting_1421154	chr20_35678743_-	SINE	Alu	AluJo
CAediting_1421155	chr20_35678776_-	SINE	Alu	AluJo
CAediting_1421156	chr20_35678799_-	SINE	Alu	AluJo
CAediting_1421157	chr20_35678812_-	SINE	Alu	AluJo
CAediting_1421158	chr20_35678845_-	SINE	Alu	AluJo
CAediting_1421159	chr20_35678852_-	SINE	Alu	AluJo
CAediting_1421160	chr20_35679244_-	SINE	Alu	AluSg
CAediting_1421161	chr20_35679256_-	SINE	Alu	AluSg
CAediting_1421162	chr20_35679267_-	SINE	Alu	AluSg
CAediting_1421163	chr20_35679269_-	SINE	Alu	AluSg
CAediting_1421164	chr20_35679276_-	SINE	Alu	AluSg
CAediting_1421165	chr20_35679280_-	SINE	Alu	AluSg
CAediting_1421166	chr20_35679281_-	SINE	Alu	AluSg
CAediting_1421167	chr20_35679305_-	SINE	Alu	AluSg
CAediting_1421168	chr20_35679308_-	SINE	Alu	AluSg
CAediting_1421169	chr20_35679312_-	SINE	Alu	AluSg
CAediting_1421170	chr20_35679316_-	SINE	Alu	AluSg
CAediting_1421171	chr20_35679321_-	SINE	Alu	AluSg
CAediting_1421172	chr20_35679322_-	SINE	Alu	AluSg
CAediting_1421173	chr20_35679348_-	SINE	Alu	AluSg
CAediting_1421174	chr20_35679353_-	SINE	Alu	AluSg
CAediting_1421175	chr20_35679357_-	SINE	Alu	AluSg
CAediting_1421176	chr20_35679362_-	SINE	Alu	AluSg
CAediting_1421177	chr20_35679403_-	SINE	Alu	AluSg
CAediting_1421178	chr20_35679411_-	SINE	Alu	AluSg
CAediting_1421179	chr20_35679437_-	SINE	Alu	AluSg
CAediting_1421180	chr20_35680060_-	SINE	Alu	AluY
CAediting_1421181	chr20_35680115_-	SINE	Alu	AluY
CAediting_1421182	chr20_35684280_-	SINE	Alu	AluY
CAediting_1421183	chr20_35684548_-	SINE	Alu	AluSx1
CAediting_1421184	chr20_35684578_-	SINE	Alu	AluSx1
CAediting_1421185	chr20_35684584_-	SINE	Alu	AluSx1
CAediting_1421186	chr20_35684663_-	SINE	Alu	AluSx1
CAediting_1421187	chr20_35684666_-	SINE	Alu	AluSx1
CAediting_1421188	chr20_35684667_-	SINE	Alu	AluSx1
CAediting_1421189	chr20_35684813_-	SINE	Alu	AluJo
CAediting_1421190	chr20_35684829_-	SINE	Alu	AluJo
CAediting_1421191	chr20_35685083_-	SINE	Alu	AluSx
CAediting_1421192	chr20_35685251_-	SINE	Alu	AluSz6
CAediting_1421193	chr20_35685263_-	SINE	Alu	AluSz6
CAediting_1421194	chr20_35685295_-	SINE	Alu	AluSz6
CAediting_1421195	chr20_35685406_-	SINE	Alu	AluSz6
CAediting_1421196	chr20_35685445_-	SINE	Alu	AluSz6
CAediting_1421197	chr20_35685446_-	SINE	Alu	AluSz6
CAediting_1421198	chr20_35685806_-	SINE	Alu	AluSq
CAediting_1421199	chr20_35691846_-	SINE	Alu	AluSx3
CAediting_1421200	chr20_35692017_-	SINE	Alu	AluSp
CAediting_1421201	chr20_35692252_-	SINE	Alu	AluSx3
CAediting_1421202	chr20_35692262_-	SINE	Alu	AluSx3
CAediting_1421203	chr20_35692292_-	SINE	Alu	AluSx3
CAediting_1421204	chr20_35692327_-	SINE	Alu	AluSx3
CAediting_1421205	chr20_35692343_-	SINE	Alu	AluSx3
CAediting_1421206	chr20_35692488_-	SINE	Alu	AluJb
CAediting_1421207	chr20_35692596_-	SINE	Alu	AluJb
CAediting_1421208	chr20_35692613_-	SINE	Alu	AluJb
CAediting_1421209	chr20_35692643_-	SINE	Alu	AluJb
CAediting_1421210	chr20_35692654_-	SINE	Alu	AluJb
CAediting_1421211	chr20_35692685_-	SINE	Alu	AluJb
CAediting_1421212	chr20_35692691_-	SINE	Alu	AluJb
CAediting_1421213	chr20_35692767_-	SINE	Alu	AluSx1
CAediting_1421214	chr20_35692785_-	SINE	Alu	AluSx1
CAediting_1421215	chr20_35692799_-	SINE	Alu	AluSx1
CAediting_1421216	chr20_35692853_-	SINE	Alu	AluSx1
CAediting_1421217	chr20_35693135_-	SINE	Alu	AluSx3
CAediting_1421218	chr20_35693163_-	SINE	Alu	AluSx3
CAediting_1421219	chr20_35693199_-	SINE	Alu	AluSx3
CAediting_1421220	chr20_35693200_-	SINE	Alu	AluSx3
CAediting_1421221	chr20_35693213_-	SINE	Alu	AluSx3
CAediting_1421222	chr20_35693260_-	SINE	Alu	AluSx3
CAediting_1421223	chr20_35693263_-	SINE	Alu	AluSx3
CAediting_1421224	chr20_35693264_-	SINE	Alu	AluSx3
CAediting_1421225	chr20_35693268_-	SINE	Alu	AluSx3
CAediting_1421226	chr20_35693270_-	SINE	Alu	AluSx3
CAediting_1421227	chr20_35693272_-	SINE	Alu	AluSx3
CAediting_1421228	chr20_35693273_-	SINE	Alu	AluSx3
CAediting_1421229	chr20_35693274_-	SINE	Alu	AluSx3
CAediting_1421230	chr20_35693277_-	SINE	Alu	AluSx3
CAediting_1421231	chr20_35693280_-	SINE	Alu	AluSx3
CAediting_1421232	chr20_35693286_-	SINE	Alu	AluSx3
CAediting_1421233	chr20_35693301_-	SINE	Alu	AluSx3
CAediting_1421234	chr20_35693340_-	SINE	Alu	AluSx3
CAediting_1421235	chr20_35693365_-	SINE	Alu	AluSx3
CAediting_1421236	chr20_35693387_-	SINE	Alu	AluSx3
CAediting_1421237	chr20_35693571_-	SINE	Alu	AluJo
CAediting_1421238	chr20_35693583_-	SINE	Alu	AluJo
CAediting_1421239	chr20_35693584_-	SINE	Alu	AluJo
CAediting_1421240	chr20_35693707_-	SINE	Alu	AluY
CAediting_1421241	chr20_35693774_-	SINE	Alu	AluY
CAediting_1421242	chr20_35693796_-	SINE	Alu	AluY
CAediting_1421243	chr20_35693799_-	SINE	Alu	AluY
CAediting_1421244	chr20_35693813_-	SINE	Alu	AluY
CAediting_1421245	chr20_35693814_-	SINE	Alu	AluY
CAediting_1421246	chr20_35693846_-	SINE	Alu	AluY
CAediting_1421247	chr20_35694037_-	SINE	Alu	AluJo
CAediting_1421248	chr20_35694051_-	SINE	Alu	AluJo
CAediting_1421249	chr20_35694060_-	SINE	Alu	AluJo
CAediting_1421250	chr20_35694063_-	SINE	Alu	AluJo
CAediting_1421251	chr20_35694064_-	SINE	Alu	AluJo
CAediting_1421252	chr20_35694094_-	SINE	Alu	AluJo
CAediting_1421253	chr20_35694120_-	SINE	Alu	AluJo
CAediting_1421254	chr20_35694172_-	SINE	Alu	AluSq2
CAediting_1421255	chr20_35694206_-	SINE	Alu	AluSq2
CAediting_1421256	chr20_35694215_-	SINE	Alu	AluSq2
CAediting_1421257	chr20_35694247_-	SINE	Alu	AluSq2
CAediting_1421258	chr20_35694250_-	SINE	Alu	AluSq2
CAediting_1421259	chr20_35694266_-	SINE	Alu	AluSq2
CAediting_1421260	chr20_35694283_-	SINE	Alu	AluSq2
CAediting_1421261	chr20_35694315_-	SINE	Alu	AluSq2
CAediting_1421262	chr20_35694327_-	SINE	Alu	AluSq2
CAediting_1421263	chr20_35694341_-	SINE	Alu	AluSq2
CAediting_1421264	chr20_35694348_-	SINE	Alu	AluSq2
CAediting_1421265	chr20_35694387_-	SINE	Alu	AluSq2
CAediting_1421266	chr20_35694393_-	SINE	Alu	AluSq2
CAediting_1421267	chr20_35694409_-	SINE	Alu	AluSq2
CAediting_1421268	chr20_35694412_-	SINE	Alu	AluSq2
CAediting_1421269	chr20_35694417_-	SINE	Alu	AluSq2
CAediting_1421270	chr20_35694696_-	SINE	Alu	AluY
CAediting_1421271	chr20_35694700_-	SINE	Alu	AluY
CAediting_1421272	chr20_35694708_-	SINE	Alu	AluY
CAediting_1421273	chr20_35694716_-	SINE	Alu	AluY
CAediting_1421274	chr20_35694720_-	SINE	Alu	AluY
CAediting_1421275	chr20_35694722_-	SINE	Alu	AluY
CAediting_1421276	chr20_35694725_-	SINE	Alu	AluY
CAediting_1421277	chr20_35694731_-	SINE	Alu	AluY
CAediting_1421278	chr20_35694740_-	SINE	Alu	AluY
CAediting_1421279	chr20_35694741_-	SINE	Alu	AluY
CAediting_1421280	chr20_35694765_-	SINE	Alu	AluY
CAediting_1421281	chr20_35694767_-	SINE	Alu	AluY
CAediting_1421282	chr20_35694777_-	SINE	Alu	AluY
CAediting_1421283	chr20_35694789_-	SINE	Alu	AluY
CAediting_1421284	chr20_35694802_-	SINE	Alu	AluY
CAediting_1421285	chr20_35694807_-	SINE	Alu	AluY
CAediting_1421286	chr20_35694826_-	SINE	Alu	AluY
CAediting_1421287	chr20_35694842_-	SINE	Alu	AluY
CAediting_1421288	chr20_35694875_-	SINE	Alu	AluY
CAediting_1421289	chr20_35694881_-	SINE	Alu	AluY
CAediting_1421290	chr20_35696944_-	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for NFS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000244005.11.NFS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000244005.11.NFS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NFS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for NFS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NFS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1421271	chr20_35694700_-	ENSG00000244005.11	ENST00000306750	hsa-miR-3190-5p	35694694	35694701	8mer-1a	35694694	35694712	148.00	-20.94
CAediting_1421271	chr20_35694700_-	ENSG00000244005.11	ENST00000306750	hsa-miR-548s	35694696	35694702	7mer-m8	35694695	35694719	151.00	-16.53
CAediting_1421270	chr20_35694696_-	ENSG00000244005.11	ENST00000306750	hsa-miR-1180-3p	35694693	35694699	7mer-m8	35694692	35694712	157.00	-22.29

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1421272	chr20_35694708_-	ENSG00000244005.11	ENST00000306750	hsa-miR-216a-3p	35694703	35694709	7mer-m8	35694702	35694723	150	-21.87
CAediting_1421270	chr20_35694696_-	ENSG00000244005.11	ENST00000306750	hsa-miR-3064-5p	35694694	35694700	7mer-1a	35694694	35694714	140	-21.33
CAediting_1421271	chr20_35694700_-	ENSG00000244005.11	ENST00000306750	hsa-miR-3064-5p	35694694	35694700	7mer-1a	35694694	35694714	140	-21.33
CAediting_1421272	chr20_35694708_-	ENSG00000244005.11	ENST00000306750	hsa-miR-3681-3p	35694703	35694709	7mer-m8	35694702	35694723	140	-16.62
CAediting_1421270	chr20_35694696_-	ENSG00000244005.11	ENST00000306750	hsa-miR-664a-5p	35694694	35694701	8mer-1a	35694694	35694716	148	-14.2
CAediting_1421271	chr20_35694700_-	ENSG00000244005.11	ENST00000306750	hsa-miR-664a-5p	35694694	35694701	8mer-1a	35694694	35694716	148	-14.2

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000244005.11	ENST00000374085	hsa-miR-605-3p	35668755	35668762	8mer-1a	35668755	35668776	140	-11.71
CAediting_396018	chr5_1062918_-	ENSG00000244005.11	ENST00000440385	hsa-miR-4635	35669645	35669652	8mer-1a	35669645	35669665	160	-24.56

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NFS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for NFS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for NFS1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for NFS1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NFS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
NFS1	Q9Y697	DB00114	Pyridoxal phosphate	Cysteine desulfurase, mitochondrial	SmallMoleculeDrug	approved\|investigational\|nutraceutical
NFS1	Q9Y697	DB00151	Cysteine	Cysteine desulfurase, mitochondrial	SmallMoleculeDrug	approved\|nutraceutical

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RelatedDiseases for NFS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
NFS1	C4750855	Severe neonatal lactic acidosis due to NFS1-ISD11 complex deficiency	1	ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene