CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: BTAF1 (CAeditome ID:9044)

Gene summary for BTAF1

check button Gene summary
Gene informationGene symbol

BTAF1

Gene ID

9044

Gene nameB-TFIID TATA-box binding protein associated factor 1
SynonymsMOT1|TAF(II)170|TAF172|TAFII170
Cytomap

10q23.32

Type of geneprotein-coding
DescriptionTATA-binding protein-associated factor 172ATP-dependent helicase BTAF1B-TFIID transcription factor-associated 170 kDa subunitBTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)Mot1 homologTBP-associa
Modification date20210518
UniProtAcc

O14981

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
BTAF1

GO:0003712

TATA-binding protein-associated factor 172

9488487

BTAF1

GO:0008094

TATA-binding protein-associated factor 172

9488487

BTAF1

GO:0045892

TATA-binding protein-associated factor 172

9488487

BTAF1

GO:0005654

TATA-binding protein-associated factor 172

0000052

BTAF1

GO:0043231

TATA-binding protein-associated factor 172

0000052


Top

RNA A-to-I events for BTAF1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000095564.12

check button RNA A-to-I editing events in Cancer.
CAediting_770619(91925382, +), CAediting_770620(91925386, +), CAediting_770621(91925389, +), CAediting_770622(91925397, +), CAediting_770623(91926610, +), CAediting_770624(91926611, +), CAediting_770625(91926649, +), CAediting_770626(91926653, +), CAediting_770627(91926654, +), CAediting_770628(91926661, +), CAediting_770629(91926685, +), CAediting_770630(91927861, +), CAediting_770631(91928457, +), CAediting_770632(91928477, +), CAediting_770633(91928494, +), CAediting_770634(91928513, +), CAediting_770635(91928535, +), CAediting_770636(91928536, +), CAediting_770637(91928541, +), CAediting_770638(91928546, +), CAediting_770639(91928551, +), CAediting_770640(91928553, +), CAediting_770641(91928557, +), CAediting_770642(91928558, +), CAediting_770643(91928561, +), CAediting_770644(91928571, +), CAediting_770645(91932124, +), CAediting_770646(91938727, +), CAediting_770647(91938741, +), CAediting_770648(91938754, +), CAediting_770649(91940785, +), CAediting_770650(91942020, +), CAediting_770651(91942163, +), CAediting_770652(91943059, +), CAediting_770653(91946144, +), CAediting_770654(91946169, +), CAediting_770655(91946194, +), CAediting_770656(91946216, +), CAediting_770657(91946265, +), CAediting_770658(91946271, +), CAediting_770659(91947032, +), CAediting_770660(91948433, +), CAediting_770661(91948464, +), CAediting_770662(91949042, +), CAediting_770663(91949043, +), CAediting_770664(91949055, +), CAediting_770665(91949096, +), CAediting_770666(91949101, +), CAediting_770667(91949907, +), CAediting_770668(91949985, +), CAediting_770669(91949995, +), CAediting_770670(91950061, +), CAediting_770671(91950062, +), CAediting_770672(91950888, +), CAediting_770673(91952304, +), CAediting_770674(91952309, +), CAediting_770675(91953502, +), CAediting_770676(91953511, +), CAediting_770677(91953512, +), CAediting_770678(91953515, +), CAediting_770679(91953554, +), CAediting_770680(91953555, +), CAediting_770681(91953565, +), CAediting_770682(91953581, +), CAediting_770683(91953597, +), CAediting_770684(91953605, +), CAediting_770685(91953618, +), CAediting_770686(91953620, +), CAediting_770687(91956735, +), CAediting_770688(91958110, +), CAediting_770689(91958591, +), CAediting_770690(91963139, +), CAediting_770691(91963216, +), CAediting_770692(91963225, +), CAediting_770693(91963244, +), CAediting_770694(91968887, +), CAediting_770695(91968973, +), CAediting_770696(91969000, +), CAediting_770697(91969003, +), CAediting_770698(91969700, +), CAediting_770699(91969731, +), CAediting_770700(91969844, +), CAediting_770701(91997831, +), CAediting_770702(91997899, +), CAediting_770703(91997923, +), CAediting_770704(91997980, +), CAediting_770705(91997988, +), CAediting_770706(91998006, +), CAediting_770707(91998016, +), CAediting_770708(91998035, +), CAediting_770709(91998036, +), CAediting_770710(91998048, +), CAediting_770711(91998058, +), CAediting_770712(91998061, +), CAediting_770713(91998067, +), CAediting_770714(91998076, +), CAediting_770715(91998086, +), CAediting_770716(91998143, +), CAediting_770717(91998841, +), CAediting_770718(91998936, +), CAediting_770719(91998942, +), CAediting_770720(91998943, +), CAediting_770721(91998956, +), CAediting_770722(91998984, +), CAediting_770723(91999012, +), CAediting_770724(91999023, +), CAediting_770725(91999561, +), CAediting_770726(91999614, +), CAediting_770727(91999621, +), CAediting_770728(91999627, +), CAediting_770729(91999654, +), CAediting_770730(91999655, +), CAediting_770731(92000816, +), CAediting_770732(92001836, +), CAediting_770733(92001844, +), CAediting_770734(92001849, +), CAediting_770735(92001858, +), CAediting_770736(92001880, +), CAediting_770737(92001884, +), CAediting_770738(92001903, +), CAediting_770739(92002962, +), CAediting_770740(92002981, +), CAediting_770741(92002986, +), CAediting_770742(92003036, +), CAediting_770743(92003037, +), CAediting_770744(92003042, +), CAediting_770745(92003046, +), CAediting_770746(92003058, +), CAediting_770747(92003068, +), CAediting_770748(92003076, +), CAediting_770749(92003077, +), CAediting_770750(92003084, +), CAediting_770751(92003097, +), CAediting_770752(92003108, +), CAediting_770753(92003116, +), CAediting_770754(92005895, +), CAediting_770755(92005925, +), CAediting_770756(92005930, +), CAediting_770757(92005935, +), CAediting_770758(92005941, +), CAediting_770759(92005951, +), CAediting_770760(92005974, +), CAediting_770761(92005992, +), CAediting_770762(92005999, +), CAediting_770763(92006031, +), CAediting_770764(92012686, +), CAediting_770765(92012692, +), CAediting_770766(92022491, +), CAediting_770767(92022492, +), CAediting_770768(92022535, +),

Top

RNA editing positional annotations for BTAF1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_770619chr10_91925382_+intronic
CAediting_770620chr10_91925386_+intronic
CAediting_770621chr10_91925389_+intronic
CAediting_770622chr10_91925397_+intronic
CAediting_770623chr10_91926610_+intronic
CAediting_770624chr10_91926611_+intronic
CAediting_770625chr10_91926649_+intronic
CAediting_770626chr10_91926653_+intronic
CAediting_770627chr10_91926654_+intronic
CAediting_770628chr10_91926661_+intronic
CAediting_770629chr10_91926685_+intronic
CAediting_770630chr10_91927861_+intronic
CAediting_770631chr10_91928457_+intronic
CAediting_770632chr10_91928477_+intronic
CAediting_770633chr10_91928494_+intronic
CAediting_770634chr10_91928513_+intronic
CAediting_770635chr10_91928535_+intronic
CAediting_770636chr10_91928536_+intronic
CAediting_770637chr10_91928541_+intronic
CAediting_770638chr10_91928546_+intronic
CAediting_770639chr10_91928551_+intronic
CAediting_770640chr10_91928553_+intronic
CAediting_770641chr10_91928557_+intronic
CAediting_770642chr10_91928558_+intronic
CAediting_770643chr10_91928561_+intronic
CAediting_770644chr10_91928571_+intronic
CAediting_770645chr10_91932124_+intronic
CAediting_770646chr10_91938727_+intronic
CAediting_770647chr10_91938741_+intronic
CAediting_770648chr10_91938754_+intronic
CAediting_770649chr10_91940785_+intronic
CAediting_770650chr10_91942020_+intronic
CAediting_770651chr10_91942163_+intronic
CAediting_770652chr10_91943059_+intronic
CAediting_770653chr10_91946144_+intronic
CAediting_770654chr10_91946169_+intronic
CAediting_770655chr10_91946194_+intronic
CAediting_770656chr10_91946216_+intronic
CAediting_770657chr10_91946265_+intronic
CAediting_770658chr10_91946271_+intronic
CAediting_770659chr10_91947032_+intronic
CAediting_770660chr10_91948433_+intronic
CAediting_770661chr10_91948464_+intronic
CAediting_770662chr10_91949042_+intronic
CAediting_770663chr10_91949043_+intronic
CAediting_770664chr10_91949055_+intronic
CAediting_770665chr10_91949096_+intronic
CAediting_770666chr10_91949101_+intronic
CAediting_770667chr10_91949907_+intronic
CAediting_770668chr10_91949985_+intronic
CAediting_770669chr10_91949995_+intronic
CAediting_770670chr10_91950061_+intronic
CAediting_770671chr10_91950062_+intronic
CAediting_770672chr10_91950888_+intronic
CAediting_770673chr10_91952304_+intronic
CAediting_770674chr10_91952309_+intronic
CAediting_770675chr10_91953502_+intronic
CAediting_770676chr10_91953511_+intronic
CAediting_770677chr10_91953512_+intronic
CAediting_770678chr10_91953515_+intronic
CAediting_770679chr10_91953554_+intronic
CAediting_770680chr10_91953555_+intronic
CAediting_770681chr10_91953565_+intronic
CAediting_770682chr10_91953581_+intronic
CAediting_770683chr10_91953597_+intronic
CAediting_770684chr10_91953605_+intronic
CAediting_770685chr10_91953618_+intronic
CAediting_770686chr10_91953620_+intronic
CAediting_770687chr10_91956735_+ncRNA_intronic
CAediting_770688chr10_91958110_+ncRNA_intronic
CAediting_770689chr10_91958591_+ncRNA_intronic
CAediting_770690chr10_91963139_+ncRNA_intronic
CAediting_770691chr10_91963216_+ncRNA_intronic
CAediting_770692chr10_91963225_+ncRNA_intronic
CAediting_770693chr10_91963244_+ncRNA_intronic
CAediting_770694chr10_91968887_+ncRNA_intronic
CAediting_770695chr10_91968973_+ncRNA_intronic
CAediting_770696chr10_91969000_+ncRNA_intronic
CAediting_770697chr10_91969003_+ncRNA_intronic
CAediting_770698chr10_91969700_+ncRNA_intronic
CAediting_770699chr10_91969731_+ncRNA_intronic
CAediting_770700chr10_91969844_+ncRNA_intronic
CAediting_770701chr10_91997831_+intronic
CAediting_770702chr10_91997899_+intronic
CAediting_770703chr10_91997923_+intronic
CAediting_770704chr10_91997980_+intronic
CAediting_770705chr10_91997988_+intronic
CAediting_770706chr10_91998006_+intronic
CAediting_770707chr10_91998016_+intronic
CAediting_770708chr10_91998035_+intronic
CAediting_770709chr10_91998036_+intronic
CAediting_770710chr10_91998048_+intronic
CAediting_770711chr10_91998058_+intronic
CAediting_770712chr10_91998061_+intronic
CAediting_770713chr10_91998067_+intronic
CAediting_770714chr10_91998076_+intronic
CAediting_770715chr10_91998086_+intronic
CAediting_770716chr10_91998143_+intronic
CAediting_770717chr10_91998841_+intronic
CAediting_770718chr10_91998936_+intronic
CAediting_770719chr10_91998942_+intronic
CAediting_770720chr10_91998943_+intronic
CAediting_770721chr10_91998956_+intronic
CAediting_770722chr10_91998984_+intronic
CAediting_770723chr10_91999012_+intronic
CAediting_770724chr10_91999023_+intronic
CAediting_770725chr10_91999561_+intronic
CAediting_770726chr10_91999614_+intronic
CAediting_770727chr10_91999621_+intronic
CAediting_770728chr10_91999627_+intronic
CAediting_770729chr10_91999654_+intronic
CAediting_770730chr10_91999655_+intronic
CAediting_770731chr10_92000816_+intronic
CAediting_770732chr10_92001836_+intronic
CAediting_770733chr10_92001844_+intronic
CAediting_770734chr10_92001849_+intronic
CAediting_770735chr10_92001858_+intronic
CAediting_770736chr10_92001880_+intronic
CAediting_770737chr10_92001884_+intronic
CAediting_770738chr10_92001903_+intronic
CAediting_770739chr10_92002962_+intronic
CAediting_770740chr10_92002981_+intronic
CAediting_770741chr10_92002986_+intronic
CAediting_770742chr10_92003036_+intronic
CAediting_770743chr10_92003037_+intronic
CAediting_770744chr10_92003042_+intronic
CAediting_770745chr10_92003046_+intronic
CAediting_770746chr10_92003058_+intronic
CAediting_770747chr10_92003068_+intronic
CAediting_770748chr10_92003076_+intronic
CAediting_770749chr10_92003077_+intronic
CAediting_770750chr10_92003084_+intronic
CAediting_770751chr10_92003097_+intronic
CAediting_770752chr10_92003108_+intronic
CAediting_770753chr10_92003116_+intronic
CAediting_770754chr10_92005895_+intronic
CAediting_770755chr10_92005925_+intronic
CAediting_770756chr10_92005930_+intronic
CAediting_770757chr10_92005935_+intronic
CAediting_770758chr10_92005941_+intronic
CAediting_770759chr10_92005951_+intronic
CAediting_770760chr10_92005974_+intronic
CAediting_770761chr10_92005992_+intronic
CAediting_770762chr10_92005999_+intronic
CAediting_770763chr10_92006031_+intronic
CAediting_770764chr10_92012686_+intronic
CAediting_770765chr10_92012692_+intronic
CAediting_770766chr10_92022491_+intronic
CAediting_770767chr10_92022492_+intronic
CAediting_770768chr10_92022535_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_770630chr10_91927861_+DNATcMar-TiggerTigger12A
CAediting_770631chr10_91928457_+DNATcMar-TiggerTigger12A
CAediting_770632chr10_91928477_+DNATcMar-TiggerTigger12A
CAediting_770633chr10_91928494_+DNATcMar-TiggerTigger12A
CAediting_770634chr10_91928513_+DNATcMar-TiggerTigger12A
CAediting_770635chr10_91928535_+DNATcMar-TiggerTigger12A
CAediting_770636chr10_91928536_+DNATcMar-TiggerTigger12A
CAediting_770637chr10_91928541_+DNATcMar-TiggerTigger12A
CAediting_770638chr10_91928546_+DNATcMar-TiggerTigger12A
CAediting_770639chr10_91928551_+DNATcMar-TiggerTigger12A
CAediting_770640chr10_91928553_+DNATcMar-TiggerTigger12A
CAediting_770641chr10_91928557_+DNATcMar-TiggerTigger12A
CAediting_770642chr10_91928558_+DNATcMar-TiggerTigger12A
CAediting_770643chr10_91928561_+DNATcMar-TiggerTigger12A
CAediting_770644chr10_91928571_+DNATcMar-TiggerTigger12A
CAediting_770646chr10_91938727_+SINEAluFAM
CAediting_770647chr10_91938741_+SINEAluFAM
CAediting_770648chr10_91938754_+SINEAluFAM
CAediting_770649chr10_91940785_+SINEAluAluSz6
CAediting_770650chr10_91942020_+SINEAluAluJr4
CAediting_770651chr10_91942163_+SINEAluAluJr4
CAediting_770652chr10_91943059_+SINEAluAluSx1
CAediting_770653chr10_91946144_+SINEAluAluSp
CAediting_770654chr10_91946169_+SINEAluAluSp
CAediting_770655chr10_91946194_+SINEAluAluSp
CAediting_770656chr10_91946216_+SINEAluAluSp
CAediting_770657chr10_91946265_+SINEAluAluSp
CAediting_770658chr10_91946271_+SINEAluAluSp
CAediting_770659chr10_91947032_+SINEAluAluSx1
CAediting_770660chr10_91948433_+SINEAluAluJr
CAediting_770661chr10_91948464_+SINEAluAluJr
CAediting_770662chr10_91949042_+SINEAluAluJo
CAediting_770663chr10_91949043_+SINEAluAluJo
CAediting_770664chr10_91949055_+SINEAluAluJo
CAediting_770665chr10_91949096_+SINEAluAluJo
CAediting_770666chr10_91949101_+SINEAluAluJo
CAediting_770667chr10_91949907_+SINEAluAluJr
CAediting_770668chr10_91949985_+SINEAluAluJr
CAediting_770669chr10_91949995_+SINEAluAluJr
CAediting_770670chr10_91950061_+SINEAluAluJr
CAediting_770671chr10_91950062_+SINEAluAluJr
CAediting_770672chr10_91950888_+SINEAluAluJo
CAediting_770682chr10_91953581_+LINEL1L1MC
CAediting_770683chr10_91953597_+LINEL1L1MC
CAediting_770684chr10_91953605_+LINEL1L1MC
CAediting_770685chr10_91953618_+LINEL1L1MC
CAediting_770686chr10_91953620_+LINEL1L1MC
CAediting_770687chr10_91956735_+SINEAluAluSx3
CAediting_770688chr10_91958110_+SINEAluAluSz
CAediting_770689chr10_91958591_+SINEAluAluSx1
CAediting_770690chr10_91963139_+SINEAluAluJb
CAediting_770691chr10_91963216_+SINEAluAluJb
CAediting_770692chr10_91963225_+SINEAluAluJb
CAediting_770693chr10_91963244_+SINEAluAluJb
CAediting_770694chr10_91968887_+SINEAluAluJr
CAediting_770695chr10_91968973_+SINEAluAluJr
CAediting_770696chr10_91969000_+SINEAluAluJr
CAediting_770697chr10_91969003_+SINEAluAluJr
CAediting_770698chr10_91969700_+SINEAluAluSz6
CAediting_770699chr10_91969731_+SINEAluAluSz6
CAediting_770700chr10_91969844_+SINEAluAluSz6
CAediting_770701chr10_91997831_+SINEAluAluSx
CAediting_770702chr10_91997899_+SINEAluAluSx
CAediting_770703chr10_91997923_+SINEAluAluSx
CAediting_770704chr10_91997980_+SINEAluAluSx
CAediting_770705chr10_91997988_+SINEAluAluSx
CAediting_770706chr10_91998006_+SINEAluAluSx
CAediting_770707chr10_91998016_+SINEAluAluSx
CAediting_770708chr10_91998035_+SINEAluAluSx
CAediting_770709chr10_91998036_+SINEAluAluSx
CAediting_770710chr10_91998048_+SINEAluAluSx
CAediting_770711chr10_91998058_+SINEAluAluSx
CAediting_770712chr10_91998061_+SINEAluAluSx
CAediting_770713chr10_91998067_+SINEAluAluSx
CAediting_770714chr10_91998076_+SINEAluAluSx
CAediting_770715chr10_91998086_+SINEAluAluSx
CAediting_770716chr10_91998143_+SINEAluAluSx
CAediting_770717chr10_91998841_+SINEAluAluSz
CAediting_770718chr10_91998936_+SINEAluAluSz
CAediting_770719chr10_91998942_+SINEAluAluSz
CAediting_770720chr10_91998943_+SINEAluAluSz
CAediting_770721chr10_91998956_+SINEAluAluSz
CAediting_770722chr10_91998984_+SINEAluAluSz
CAediting_770723chr10_91999012_+SINEAluAluSz
CAediting_770724chr10_91999023_+SINEAluAluSz
CAediting_770725chr10_91999561_+SINEAluAluSp
CAediting_770726chr10_91999614_+SINEAluAluSp
CAediting_770727chr10_91999621_+SINEAluAluSp
CAediting_770728chr10_91999627_+SINEAluAluSp
CAediting_770729chr10_91999654_+SINEAluAluSp
CAediting_770730chr10_91999655_+SINEAluAluSp
CAediting_770731chr10_92000816_+SINEAluAluSq2
CAediting_770732chr10_92001836_+SINEAluFLAM_C
CAediting_770733chr10_92001844_+SINEAluFLAM_C
CAediting_770734chr10_92001849_+SINEAluFLAM_C
CAediting_770735chr10_92001858_+SINEAluFLAM_C
CAediting_770736chr10_92001880_+SINEAluFLAM_C
CAediting_770737chr10_92001884_+SINEAluFLAM_C
CAediting_770738chr10_92001903_+SINEAluFLAM_C
CAediting_770739chr10_92002962_+SINEAluAluSg
CAediting_770740chr10_92002981_+SINEAluAluSg
CAediting_770741chr10_92002986_+SINEAluAluSg
CAediting_770742chr10_92003036_+SINEAluAluSg
CAediting_770743chr10_92003037_+SINEAluAluSg
CAediting_770744chr10_92003042_+SINEAluAluSg
CAediting_770745chr10_92003046_+SINEAluAluSg
CAediting_770746chr10_92003058_+SINEAluAluSg
CAediting_770747chr10_92003068_+SINEAluAluSg
CAediting_770748chr10_92003076_+SINEAluAluSg
CAediting_770749chr10_92003077_+SINEAluAluSg
CAediting_770750chr10_92003084_+SINEAluAluSg
CAediting_770751chr10_92003097_+SINEAluAluSg
CAediting_770752chr10_92003108_+SINEAluAluSg
CAediting_770753chr10_92003116_+SINEAluAluSg
CAediting_770754chr10_92005895_+SINEAluAluJo
CAediting_770755chr10_92005925_+SINEAluAluJo
CAediting_770756chr10_92005930_+SINEAluAluJo
CAediting_770757chr10_92005935_+SINEAluAluJo
CAediting_770758chr10_92005941_+SINEAluAluJo
CAediting_770759chr10_92005951_+SINEAluAluJo
CAediting_770760chr10_92005974_+SINEAluAluJo
CAediting_770761chr10_92005992_+SINEAluAluJo
CAediting_770762chr10_92005999_+SINEAluAluJo
CAediting_770763chr10_92006031_+SINEAluAluJo
CAediting_770764chr10_92012686_+SINEAluAluSz6
CAediting_770765chr10_92012692_+SINEAluAluSz6
CAediting_770766chr10_92022491_+SINEAluAluJr
CAediting_770767chr10_92022492_+SINEAluAluJr
CAediting_770768chr10_92022535_+SINEAluAluJr

Top

RNA A-to-I editing events in the alternative splicing sites for BTAF1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000095564.12.BTAF1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000095564.12.BTAF1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for BTAF1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for BTAF1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for BTAF1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000095564.12ENST00000265990hsa-miR-200b-3p92030222920302287mer-m89203020692030229155-14.14
CAediting_393chr1_1167164_+ENSG00000095564.12ENST00000544642hsa-miR-200b-3p92030222920302287mer-m89203020692030229155-14.14

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000095564.12ENST00000265990hsa-miR-548aa92029604920296107mer-m89202958792029611145-13.09
CAediting_1229415chr17_67471547_+ENSG00000095564.12ENST00000265990hsa-miR-548aa92029604920296107mer-m89202958792029611145-13.09
CAediting_117844chr1_162342605_+ENSG00000095564.12ENST00000265990hsa-miR-556-3p92030104920301118mer-1a9203009192030111146-6.93
CAediting_1229413chr17_67471544_+ENSG00000095564.12ENST00000544642hsa-miR-548aa92029604920296107mer-m89202958792029611145-13.09
CAediting_1229415chr17_67471547_+ENSG00000095564.12ENST00000544642hsa-miR-548aa92029604920296107mer-m89202958792029611145-13.09
CAediting_117844chr1_162342605_+ENSG00000095564.12ENST00000544642hsa-miR-556-3p92030104920301118mer-1a9203009192030111146-6.93

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for BTAF1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for BTAF1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
THCACAediting_770698chr10_91969700_+0.04890246822255680.271886784851465....

Top

Relation with cancer stages for BTAF1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

Top

Relation with survival for BTAF1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
STADCAediting_770712chr10_91998061_+0.00830696700438160.0092387138342.7

Top

RelatedDrugs for BTAF1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for BTAF1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource