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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: CCRL2 (CAeditome ID:9034) |
Gene summary for CCRL2 |
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Gene information | Gene symbol | CCRL2 | Gene ID | 9034 |
Gene name | C-C motif chemokine receptor like 2 | |
Synonyms | ACKR5|CKRX|CRAM|CRAM-A|CRAM-B|HCR | |
Cytomap | 3p21.31 | |
Type of gene | protein-coding | |
Description | C-C chemokine receptor-like 2atypical chemokine receptor 5chemokine (C-C motif) receptor-like 2chemokine receptor CCR11chemokine receptor Xputative MCP-1 chemokine receptor | |
Modification date | 20210518 | |
UniProtAcc | O00421 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
CCRL2 | GO:0005887 | C-C chemokine receptor-like 2 | 20002784 |
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RNA A-to-I events for CCRL2 |
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CAediting_271346(46408483, +), |
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RNA editing positional annotations for CCRL2 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_271346 | chr3_46408483_+ | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
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RNA A-to-I editing events in the alternative splicing sites for CCRL2 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CCRL2 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for CCRL2 |
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The effects of the RNA editing to the miRNA binding sites for CCRL2 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000121797.9 | ENST00000399036 | hsa-miR-200b-3p | 46409431 | 46409436 | 6mer | 46409416 | 46409437 | 141 | -19 |
CAediting_393 | chr1_1167164_+ | ENSG00000121797.9 | ENST00000357392 | hsa-miR-200b-3p | 46409431 | 46409436 | 6mer | 46409416 | 46409437 | 141 | -19 |
CAediting_393 | chr1_1167164_+ | ENSG00000121797.9 | ENST00000400882 | hsa-miR-200b-3p | 46409431 | 46409436 | 6mer | 46409416 | 46409437 | 141 | -19 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for CCRL2 |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_271346 | ENST00000357392.4 | chr3_46408483_+ | -451.40 | -448.40 | -451.40 |
CAediting_271346 | ENST00000399036.3 | chr3_46408483_+ | -571.10 | -569.10 | -571.10 |
CAediting_271346 | ENST00000400880.3 | chr3_46408483_+ | -331.00 | -329.00 | -331.00 |
CAediting_271346 | ENST00000400882.2 | chr3_46408483_+ | -484.40 | -484.50 | -484.40 |
CAediting_271346 | ENST00000433848.1 | chr3_46408483_+ | -223.00 | -220.40 | -223.00 |
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Relation with ADAR for CCRL2 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for CCRL2 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for CCRL2 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for CCRL2 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CCRL2 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
CCRL2 | C0037274 | Dermatologic disorders | 1 | CTD_human |
CCRL2 | C0274861 | Arsenic Poisoning, Inorganic | 1 | CTD_human |
CCRL2 | C0274862 | Nervous System, Organic Arsenic Poisoning | 1 | CTD_human |
CCRL2 | C0311375 | Arsenic Poisoning | 1 | CTD_human |
CCRL2 | C0751851 | Arsenic Encephalopathy | 1 | CTD_human |
CCRL2 | C0751852 | Arsenic Induced Polyneuropathy | 1 | CTD_human |