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Editing gene: CDC16 (CAeditome ID:8881)

Gene summary for CDC16

Gene summary

Gene information	Gene symbol	CDC16
	Gene ID	8881
	Gene name	cell division cycle 16
	Synonyms	ANAPC6\|APC6\|CDC16Hs\|CUT9
	Cytomap	13q34
	Type of gene	protein-coding
	Description	cell division cycle protein 16 homologanaphase-promoting complex, subunit 6cell division cycle 16 homologcyclosome subunit 6
	Modification date	20210518
	UniProtAcc	Q13042
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CDC16	GO:0070979	Cell division cycle protein 16 homolog	18485873
CDC16	GO:0005737	Cell division cycle protein 16 homolog	0000054
CDC16	GO:0005813	Cell division cycle protein 16 homolog	7736578
CDC16	GO:0072686	Cell division cycle protein 16 homolog	7736578
CDC16	GO:0005680	Cell division cycle protein 16 homolog	16364912
CDC16	GO:0005680	Cell division cycle protein 16 homolog	21926987

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RNA A-to-I events for CDC16

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000130177.13

RNA A-to-I editing events in Cancer.

CAediting_974439(114237462, +), CAediting_974440(114237554, +), CAediting_974441(114241796, +), CAediting_974442(114244495, +), CAediting_974443(114247403, +), CAediting_974444(114247743, +), CAediting_974445(114248425, +), CAediting_974446(114248426, +), CAediting_974447(114248560, +), CAediting_974448(114250372, +), CAediting_974449(114252878, +), CAediting_974450(114252990, +), CAediting_974451(114253016, +), CAediting_974452(114253017, +), CAediting_974453(114253043, +), CAediting_974454(114253569, +), CAediting_974455(114253592, +), CAediting_974456(114253596, +), CAediting_974457(114253646, +), CAediting_974458(114255674, +), CAediting_974459(114255686, +), CAediting_974460(114255704, +), CAediting_974461(114255742, +), CAediting_974462(114255743, +), CAediting_974463(114255760, +), CAediting_974464(114255768, +), CAediting_974465(114255782, +), CAediting_974466(114255785, +), CAediting_974467(114255808, +), CAediting_974468(114255809, +), CAediting_974469(114255816, +), CAediting_974470(114255826, +), CAediting_974471(114255884, +), CAediting_974472(114255897, +), CAediting_974473(114255912, +), CAediting_974474(114257448, +), CAediting_974475(114257835, +), CAediting_974476(114257850, +), CAediting_974477(114257880, +), CAediting_974478(114257886, +), CAediting_974479(114257887, +), CAediting_974480(114257891, +), CAediting_974481(114257904, +), CAediting_974482(114257913, +), CAediting_974483(114257926, +), CAediting_974484(114257928, +), CAediting_974485(114257930, +), CAediting_974486(114257936, +), CAediting_974487(114257953, +), CAediting_974488(114257961, +), CAediting_974489(114257967, +), CAediting_974490(114257970, +), CAediting_974491(114257984, +), CAediting_974492(114258037, +), CAediting_974493(114258059, +), CAediting_974494(114258842, +), CAediting_974495(114258843, +), CAediting_974496(114258848, +), CAediting_974497(114258865, +), CAediting_974498(114258867, +), CAediting_974499(114258873, +), CAediting_974500(114258888, +), CAediting_974501(114258891, +), CAediting_974502(114258899, +), CAediting_974503(114258902, +), CAediting_974504(114258905, +), CAediting_974505(114258914, +), CAediting_974506(114258920, +), CAediting_974507(114258921, +), CAediting_974508(114258922, +), CAediting_974509(114258933, +), CAediting_974510(114258936, +), CAediting_974511(114258937, +), CAediting_974512(114258938, +), CAediting_974513(114258939, +), CAediting_974514(114258940, +), CAediting_974515(114258942, +), CAediting_974516(114258944, +), CAediting_974517(114258947, +), CAediting_974518(114258948, +), CAediting_974519(114258951, +), CAediting_974520(114258955, +), CAediting_974521(114258959, +), CAediting_974522(114258969, +), CAediting_974523(114258977, +), CAediting_974524(114258978, +), CAediting_974525(114258995, +), CAediting_974526(114259001, +), CAediting_974527(114259005, +), CAediting_974528(114259011, +), CAediting_974529(114259014, +), CAediting_974530(114259018, +), CAediting_974531(114259019, +), CAediting_974532(114259020, +), CAediting_974533(114259027, +), CAediting_974534(114259040, +), CAediting_974535(114259049, +), CAediting_974536(114259056, +), CAediting_974537(114259074, +), CAediting_974538(114264266, +), CAediting_974539(114264399, +), CAediting_974540(114264412, +), CAediting_974541(114264660, +), CAediting_974542(114264698, +), CAediting_974543(114264738, +), CAediting_974544(114264744, +), CAediting_974545(114264851, +), CAediting_974546(114264870, +), CAediting_974547(114265920, +), CAediting_974548(114265928, +), CAediting_974549(114265945, +), CAediting_974550(114265995, +), CAediting_974551(114266090, +), CAediting_974552(114266097, +), CAediting_974553(114266897, +), CAediting_974554(114266958, +), CAediting_974555(114268699, +), CAediting_974556(114268709, +), CAediting_974557(114271128, +), CAediting_974558(114271494, +), CAediting_974559(114271506, +),

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RNA editing positional annotations for CDC16 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_974439	chr13_114237462_+	ncRNA_intronic
CAediting_974440	chr13_114237554_+	ncRNA_intronic
CAediting_974441	chr13_114241796_+	ncRNA_intronic
CAediting_974442	chr13_114244495_+	intronic
CAediting_974443	chr13_114247403_+	ncRNA_intronic
CAediting_974444	chr13_114247743_+	ncRNA_intronic
CAediting_974445	chr13_114248425_+	ncRNA_intronic
CAediting_974446	chr13_114248426_+	ncRNA_intronic
CAediting_974447	chr13_114248560_+	ncRNA_intronic
CAediting_974448	chr13_114250372_+	ncRNA_intronic
CAediting_974449	chr13_114252878_+	ncRNA_intronic
CAediting_974450	chr13_114252990_+	ncRNA_intronic
CAediting_974451	chr13_114253016_+	ncRNA_intronic
CAediting_974452	chr13_114253017_+	ncRNA_intronic
CAediting_974453	chr13_114253043_+	ncRNA_intronic
CAediting_974454	chr13_114253569_+	ncRNA_intronic
CAediting_974455	chr13_114253592_+	ncRNA_intronic
CAediting_974456	chr13_114253596_+	ncRNA_intronic
CAediting_974457	chr13_114253646_+	ncRNA_intronic
CAediting_974458	chr13_114255674_+	ncRNA_intronic
CAediting_974459	chr13_114255686_+	ncRNA_intronic
CAediting_974460	chr13_114255704_+	ncRNA_intronic
CAediting_974461	chr13_114255742_+	ncRNA_intronic
CAediting_974462	chr13_114255743_+	ncRNA_intronic
CAediting_974463	chr13_114255760_+	ncRNA_intronic
CAediting_974464	chr13_114255768_+	ncRNA_intronic
CAediting_974465	chr13_114255782_+	ncRNA_intronic
CAediting_974466	chr13_114255785_+	ncRNA_intronic
CAediting_974467	chr13_114255808_+	ncRNA_intronic
CAediting_974468	chr13_114255809_+	ncRNA_intronic
CAediting_974469	chr13_114255816_+	ncRNA_intronic
CAediting_974470	chr13_114255826_+	ncRNA_intronic
CAediting_974471	chr13_114255884_+	ncRNA_intronic
CAediting_974472	chr13_114255897_+	ncRNA_intronic
CAediting_974473	chr13_114255912_+	ncRNA_intronic
CAediting_974474	chr13_114257448_+	ncRNA_intronic
CAediting_974475	chr13_114257835_+	ncRNA_intronic
CAediting_974476	chr13_114257850_+	ncRNA_intronic
CAediting_974477	chr13_114257880_+	ncRNA_intronic
CAediting_974478	chr13_114257886_+	ncRNA_intronic
CAediting_974479	chr13_114257887_+	ncRNA_intronic
CAediting_974480	chr13_114257891_+	ncRNA_intronic
CAediting_974481	chr13_114257904_+	ncRNA_intronic
CAediting_974482	chr13_114257913_+	ncRNA_intronic
CAediting_974483	chr13_114257926_+	ncRNA_intronic
CAediting_974484	chr13_114257928_+	ncRNA_intronic
CAediting_974485	chr13_114257930_+	ncRNA_intronic
CAediting_974486	chr13_114257936_+	ncRNA_intronic
CAediting_974487	chr13_114257953_+	ncRNA_intronic
CAediting_974488	chr13_114257961_+	ncRNA_intronic
CAediting_974489	chr13_114257967_+	ncRNA_intronic
CAediting_974490	chr13_114257970_+	ncRNA_intronic
CAediting_974491	chr13_114257984_+	ncRNA_intronic
CAediting_974492	chr13_114258037_+	ncRNA_intronic
CAediting_974493	chr13_114258059_+	ncRNA_intronic
CAediting_974494	chr13_114258842_+	ncRNA_intronic
CAediting_974495	chr13_114258843_+	ncRNA_intronic
CAediting_974496	chr13_114258848_+	ncRNA_intronic
CAediting_974497	chr13_114258865_+	ncRNA_intronic
CAediting_974498	chr13_114258867_+	ncRNA_intronic
CAediting_974499	chr13_114258873_+	ncRNA_intronic
CAediting_974500	chr13_114258888_+	ncRNA_intronic
CAediting_974501	chr13_114258891_+	ncRNA_intronic
CAediting_974502	chr13_114258899_+	ncRNA_intronic
CAediting_974503	chr13_114258902_+	ncRNA_intronic
CAediting_974504	chr13_114258905_+	ncRNA_intronic
CAediting_974505	chr13_114258914_+	ncRNA_intronic
CAediting_974506	chr13_114258920_+	ncRNA_intronic
CAediting_974507	chr13_114258921_+	ncRNA_intronic
CAediting_974508	chr13_114258922_+	ncRNA_intronic
CAediting_974509	chr13_114258933_+	ncRNA_intronic
CAediting_974510	chr13_114258936_+	ncRNA_intronic
CAediting_974511	chr13_114258937_+	ncRNA_intronic
CAediting_974512	chr13_114258938_+	ncRNA_intronic
CAediting_974513	chr13_114258939_+	ncRNA_intronic
CAediting_974514	chr13_114258940_+	ncRNA_intronic
CAediting_974515	chr13_114258942_+	ncRNA_intronic
CAediting_974516	chr13_114258944_+	ncRNA_intronic
CAediting_974517	chr13_114258947_+	ncRNA_intronic
CAediting_974518	chr13_114258948_+	ncRNA_intronic
CAediting_974519	chr13_114258951_+	ncRNA_intronic
CAediting_974520	chr13_114258955_+	ncRNA_intronic
CAediting_974521	chr13_114258959_+	ncRNA_intronic
CAediting_974522	chr13_114258969_+	ncRNA_intronic
CAediting_974523	chr13_114258977_+	ncRNA_intronic
CAediting_974524	chr13_114258978_+	ncRNA_intronic
CAediting_974525	chr13_114258995_+	ncRNA_intronic
CAediting_974526	chr13_114259001_+	ncRNA_intronic
CAediting_974527	chr13_114259005_+	ncRNA_intronic
CAediting_974528	chr13_114259011_+	ncRNA_intronic
CAediting_974529	chr13_114259014_+	ncRNA_intronic
CAediting_974530	chr13_114259018_+	ncRNA_intronic
CAediting_974531	chr13_114259019_+	ncRNA_intronic
CAediting_974532	chr13_114259020_+	ncRNA_intronic
CAediting_974533	chr13_114259027_+	ncRNA_intronic
CAediting_974534	chr13_114259040_+	ncRNA_intronic
CAediting_974535	chr13_114259049_+	ncRNA_intronic
CAediting_974536	chr13_114259056_+	ncRNA_intronic
CAediting_974537	chr13_114259074_+	ncRNA_intronic
CAediting_974538	chr13_114264266_+	ncRNA_intronic
CAediting_974539	chr13_114264399_+	ncRNA_intronic
CAediting_974540	chr13_114264412_+	ncRNA_intronic
CAediting_974541	chr13_114264660_+	ncRNA_intronic
CAediting_974542	chr13_114264698_+	ncRNA_intronic
CAediting_974543	chr13_114264738_+	ncRNA_intronic
CAediting_974544	chr13_114264744_+	ncRNA_intronic
CAediting_974545	chr13_114264851_+	ncRNA_intronic
CAediting_974546	chr13_114264870_+	ncRNA_intronic
CAediting_974547	chr13_114265920_+	ncRNA_intronic
CAediting_974548	chr13_114265928_+	ncRNA_intronic
CAediting_974549	chr13_114265945_+	ncRNA_intronic
CAediting_974550	chr13_114265995_+	ncRNA_intronic
CAediting_974551	chr13_114266090_+	ncRNA_intronic
CAediting_974552	chr13_114266097_+	ncRNA_intronic
CAediting_974553	chr13_114266897_+	ncRNA_intronic
CAediting_974554	chr13_114266958_+	ncRNA_intronic
CAediting_974555	chr13_114268699_+	ncRNA_intronic
CAediting_974556	chr13_114268709_+	ncRNA_intronic
CAediting_974557	chr13_114271128_+	ncRNA_intronic
CAediting_974558	chr13_114271494_+	ncRNA_intronic
CAediting_974559	chr13_114271506_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_974439	chr13_114237462_+	SINE	Alu	AluJr4
CAediting_974440	chr13_114237554_+	SINE	Alu	AluJr4
CAediting_974441	chr13_114241796_+	SINE	Alu	AluJr4
CAediting_974442	chr13_114244495_+	DNA	TcMar-Mariner	MADE1
CAediting_974443	chr13_114247403_+	SINE	Alu	AluJr4
CAediting_974444	chr13_114247743_+	SINE	Alu	AluSq2
CAediting_974445	chr13_114248425_+	SINE	Alu	AluSx
CAediting_974446	chr13_114248426_+	SINE	Alu	AluSx
CAediting_974447	chr13_114248560_+	SINE	Alu	AluSx
CAediting_974448	chr13_114250372_+	SINE	Alu	AluSx1
CAediting_974449	chr13_114252878_+	SINE	Alu	AluSz
CAediting_974450	chr13_114252990_+	SINE	Alu	AluSz
CAediting_974451	chr13_114253016_+	SINE	Alu	AluSz
CAediting_974452	chr13_114253017_+	SINE	Alu	AluSz
CAediting_974453	chr13_114253043_+	SINE	Alu	AluSz
CAediting_974454	chr13_114253569_+	SINE	Alu	AluSz
CAediting_974455	chr13_114253592_+	SINE	Alu	AluSz
CAediting_974456	chr13_114253596_+	SINE	Alu	AluSz
CAediting_974457	chr13_114253646_+	SINE	Alu	AluSz
CAediting_974458	chr13_114255674_+	SINE	Alu	AluJo
CAediting_974459	chr13_114255686_+	SINE	Alu	AluJo
CAediting_974460	chr13_114255704_+	SINE	Alu	AluJo
CAediting_974461	chr13_114255742_+	SINE	Alu	AluJo
CAediting_974462	chr13_114255743_+	SINE	Alu	AluJo
CAediting_974463	chr13_114255760_+	SINE	Alu	AluJo
CAediting_974464	chr13_114255768_+	SINE	Alu	AluJo
CAediting_974465	chr13_114255782_+	SINE	Alu	AluJo
CAediting_974466	chr13_114255785_+	SINE	Alu	AluJo
CAediting_974467	chr13_114255808_+	SINE	Alu	AluJo
CAediting_974468	chr13_114255809_+	SINE	Alu	AluJo
CAediting_974469	chr13_114255816_+	SINE	Alu	AluJo
CAediting_974470	chr13_114255826_+	SINE	Alu	AluJo
CAediting_974471	chr13_114255884_+	SINE	Alu	AluJo
CAediting_974472	chr13_114255897_+	SINE	Alu	AluJo
CAediting_974473	chr13_114255912_+	SINE	Alu	AluJo
CAediting_974475	chr13_114257835_+	SINE	Alu	AluSx1
CAediting_974476	chr13_114257850_+	SINE	Alu	AluSx1
CAediting_974477	chr13_114257880_+	SINE	Alu	AluSx1
CAediting_974478	chr13_114257886_+	SINE	Alu	AluSx1
CAediting_974479	chr13_114257887_+	SINE	Alu	AluSx1
CAediting_974480	chr13_114257891_+	SINE	Alu	AluSx1
CAediting_974481	chr13_114257904_+	SINE	Alu	AluSx1
CAediting_974482	chr13_114257913_+	SINE	Alu	AluSx1
CAediting_974483	chr13_114257926_+	SINE	Alu	AluSx1
CAediting_974484	chr13_114257928_+	SINE	Alu	AluSx1
CAediting_974485	chr13_114257930_+	SINE	Alu	AluSx1
CAediting_974486	chr13_114257936_+	SINE	Alu	AluSx1
CAediting_974487	chr13_114257953_+	SINE	Alu	AluSx1
CAediting_974488	chr13_114257961_+	SINE	Alu	AluSx1
CAediting_974489	chr13_114257967_+	SINE	Alu	AluSx1
CAediting_974490	chr13_114257970_+	SINE	Alu	AluSx1
CAediting_974491	chr13_114257984_+	SINE	Alu	AluSx1
CAediting_974492	chr13_114258037_+	SINE	Alu	AluSx1
CAediting_974493	chr13_114258059_+	SINE	Alu	AluSx1
CAediting_974494	chr13_114258842_+	SINE	Alu	AluSz6
CAediting_974495	chr13_114258843_+	SINE	Alu	AluSz6
CAediting_974496	chr13_114258848_+	SINE	Alu	AluSz6
CAediting_974497	chr13_114258865_+	SINE	Alu	AluSz6
CAediting_974498	chr13_114258867_+	SINE	Alu	AluSz6
CAediting_974499	chr13_114258873_+	SINE	Alu	AluSz6
CAediting_974500	chr13_114258888_+	SINE	Alu	AluSz6
CAediting_974501	chr13_114258891_+	SINE	Alu	AluSz6
CAediting_974502	chr13_114258899_+	SINE	Alu	AluSz6
CAediting_974503	chr13_114258902_+	SINE	Alu	AluSz6
CAediting_974504	chr13_114258905_+	SINE	Alu	AluSz6
CAediting_974505	chr13_114258914_+	SINE	Alu	AluSz6
CAediting_974506	chr13_114258920_+	SINE	Alu	AluSz6
CAediting_974507	chr13_114258921_+	SINE	Alu	AluSz6
CAediting_974508	chr13_114258922_+	SINE	Alu	AluSz6
CAediting_974509	chr13_114258933_+	SINE	Alu	AluSz6
CAediting_974510	chr13_114258936_+	SINE	Alu	AluSz6
CAediting_974511	chr13_114258937_+	SINE	Alu	AluSz6
CAediting_974512	chr13_114258938_+	SINE	Alu	AluSz6
CAediting_974513	chr13_114258939_+	SINE	Alu	AluSz6
CAediting_974514	chr13_114258940_+	SINE	Alu	AluSz6
CAediting_974515	chr13_114258942_+	SINE	Alu	AluSz6
CAediting_974516	chr13_114258944_+	SINE	Alu	AluSz6
CAediting_974517	chr13_114258947_+	SINE	Alu	AluSz6
CAediting_974518	chr13_114258948_+	SINE	Alu	AluSz6
CAediting_974519	chr13_114258951_+	SINE	Alu	AluSz6
CAediting_974520	chr13_114258955_+	SINE	Alu	AluSz6
CAediting_974521	chr13_114258959_+	SINE	Alu	AluSz6
CAediting_974522	chr13_114258969_+	SINE	Alu	AluSz6
CAediting_974523	chr13_114258977_+	SINE	Alu	AluSz6
CAediting_974524	chr13_114258978_+	SINE	Alu	AluSz6
CAediting_974525	chr13_114258995_+	SINE	Alu	AluSz6
CAediting_974526	chr13_114259001_+	SINE	Alu	AluSz6
CAediting_974527	chr13_114259005_+	SINE	Alu	AluSz6
CAediting_974528	chr13_114259011_+	SINE	Alu	AluSz6
CAediting_974529	chr13_114259014_+	SINE	Alu	AluSz6
CAediting_974530	chr13_114259018_+	SINE	Alu	AluSz6
CAediting_974531	chr13_114259019_+	SINE	Alu	AluSz6
CAediting_974532	chr13_114259020_+	SINE	Alu	AluSz6
CAediting_974533	chr13_114259027_+	SINE	Alu	AluSz6
CAediting_974534	chr13_114259040_+	SINE	Alu	AluSz6
CAediting_974535	chr13_114259049_+	SINE	Alu	AluSz6
CAediting_974536	chr13_114259056_+	SINE	Alu	AluSz6
CAediting_974537	chr13_114259074_+	SINE	Alu	AluSz6
CAediting_974539	chr13_114264399_+	SINE	Alu	AluSc
CAediting_974540	chr13_114264412_+	SINE	Alu	AluSc
CAediting_974541	chr13_114264660_+	SINE	Alu	AluSx1
CAediting_974542	chr13_114264698_+	SINE	Alu	AluSx1
CAediting_974543	chr13_114264738_+	SINE	Alu	AluSx1
CAediting_974544	chr13_114264744_+	SINE	Alu	AluSx1
CAediting_974545	chr13_114264851_+	SINE	Alu	AluSx1
CAediting_974546	chr13_114264870_+	SINE	Alu	AluSx1
CAediting_974547	chr13_114265920_+	SINE	Alu	AluSp
CAediting_974548	chr13_114265928_+	SINE	Alu	AluSp
CAediting_974549	chr13_114265945_+	SINE	Alu	AluSp
CAediting_974550	chr13_114265995_+	SINE	Alu	AluSp
CAediting_974551	chr13_114266090_+	SINE	Alu	AluSp
CAediting_974552	chr13_114266097_+	SINE	Alu	AluSp
CAediting_974553	chr13_114266897_+	SINE	Alu	AluY
CAediting_974554	chr13_114266958_+	SINE	Alu	AluY
CAediting_974555	chr13_114268699_+	SINE	Alu	AluJo
CAediting_974556	chr13_114268709_+	SINE	Alu	AluJo
CAediting_974557	chr13_114271128_+	SINE	Alu	AluY
CAediting_974558	chr13_114271494_+	SINE	Alu	AluY
CAediting_974559	chr13_114271506_+	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for CDC16

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000130177.13.CDC16.

Correlation between RNA A-to-I editing and PSI for ENSG00000130177.13.CDC16.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CDC16

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CDC16

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CDC16

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CDC16

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CDC16

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CDC16

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_974519	chr13_114258951_+	0.015449257014092	0.316645037597005
ESCA	pathologic_stage	CAediting_974520	chr13_114258955_+	0.00981234942499325	0.323043490931472

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Relation with survival for CDC16

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for CDC16

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CDC16

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene