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Editing gene: PNPT1 (CAeditome ID:87178)

Gene summary for PNPT1

Gene summary

Gene information	Gene symbol	PNPT1
	Gene ID	87178
	Gene name	polyribonucleotide nucleotidyltransferase 1
	Synonyms	COXPD13\|DFNB70\|OLD35\|PNPASE\|old-35
	Cytomap	2p16.1
	Type of gene	protein-coding
	Description	polyribonucleotide nucleotidyltransferase 1, mitochondrial3'-5' RNA exonuclease OLD35PNPase 1PNPase old-35polynucleotide phosphorylase 1polynucleotide phosphorylase-like protein
	Modification date	20210531
	UniProtAcc	Q8TCS8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PNPT1	GO:0000175	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	19509288
PNPT1	GO:0004654	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	18083836
PNPT1	GO:0008266	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	18083836
PNPT1	GO:0034046	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	18083836
PNPT1	GO:0035198	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20547861
PNPT1	GO:0000957	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	18501193
PNPT1	GO:0000958	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20691904
PNPT1	GO:0000962	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	19509288
PNPT1	GO:0000962	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	29967381
PNPT1	GO:0006401	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	18083836
PNPT1	GO:0006402	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	12721301
PNPT1	GO:0006402	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	16055741
PNPT1	GO:0034599	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	18501193
PNPT1	GO:0035458	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	16410805
PNPT1	GO:0035927	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20691904
PNPT1	GO:0035928	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20691904
PNPT1	GO:0043631	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	18083836
PNPT1	GO:0045926	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	12721301
PNPT1	GO:0051260	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20691904
PNPT1	GO:0051726	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	12721301
PNPT1	GO:0070207	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	19509288
PNPT1	GO:0070207	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20691904
PNPT1	GO:0071042	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	16934922
PNPT1	GO:2000627	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20547861
PNPT1	GO:2000772	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	16055741
PNPT1	GO:0005737	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	16055741
PNPT1	GO:0005739	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	0000052
PNPT1	GO:0005739	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	16055741
PNPT1	GO:0005739	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	19864255
PNPT1	GO:0005739	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	20691904
PNPT1	GO:0005758	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	16966381
PNPT1	GO:0005829	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	0000052
PNPT1	GO:0045025	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	19509288
PNPT1	GO:0045025	Polyribonucleotide nucleotidyltransferase 1, mitochondrial	29967381

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RNA A-to-I events for PNPT1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000138035.13

RNA A-to-I editing events in Cancer.

CAediting_182835(55634297, -), CAediting_182836(55634299, -), CAediting_182837(55634314, -), CAediting_182838(55634327, -), CAediting_182839(55634334, -), CAediting_182840(55634338, -), CAediting_182841(55634345, -), CAediting_182842(55634351, -), CAediting_182843(55634359, -), CAediting_182844(55634364, -), CAediting_182845(55634367, -), CAediting_182846(55634373, -), CAediting_182847(55634383, -), CAediting_182848(55634390, -), CAediting_182849(55634399, -), CAediting_182850(55634400, -), CAediting_182851(55634426, -), CAediting_182852(55634435, -), CAediting_182853(55634444, -), CAediting_182854(55634450, -), CAediting_182855(55634466, -), CAediting_182856(55634475, -), CAediting_182857(55634480, -), CAediting_182858(55634489, -), CAediting_182859(55634494, -), CAediting_182860(55634529, -), CAediting_182861(55634534, -), CAediting_182862(55634535, -), CAediting_182863(55634583, -), CAediting_182864(55634585, -), CAediting_182865(55634608, -), CAediting_182866(55634616, -), CAediting_182867(55634623, -), CAediting_182868(55634628, -), CAediting_182869(55634645, -), CAediting_182870(55634652, -), CAediting_182871(55634653, -), CAediting_182872(55634664, -), CAediting_182873(55634667, -), CAediting_182874(55634684, -), CAediting_182875(55634693, -), CAediting_182876(55634694, -), CAediting_182877(55634720, -), CAediting_182878(55634744, -), CAediting_182879(55634780, -), CAediting_182880(55634783, -), CAediting_182881(55634793, -), CAediting_182882(55634807, -), CAediting_182883(55634823, -), CAediting_182884(55634828, -), CAediting_182885(55634835, -), CAediting_182886(55634837, -), CAediting_182887(55634851, -), CAediting_182888(55634888, -), CAediting_182889(55635372, -), CAediting_182890(55635382, -), CAediting_182891(55635387, -), CAediting_182892(55635407, -), CAediting_182893(55635412, -), CAediting_182894(55635423, -), CAediting_182895(55635439, -), CAediting_182896(55635443, -), CAediting_182897(55635452, -), CAediting_182898(55635453, -), CAediting_182899(55635479, -), CAediting_182900(55635491, -), CAediting_182901(55635493, -), CAediting_182902(55635497, -), CAediting_182903(55635508, -), CAediting_182904(55635510, -), CAediting_182905(55635516, -), CAediting_182906(55635518, -), CAediting_182907(55635531, -), CAediting_182908(55635533, -), CAediting_182909(55635542, -), CAediting_182910(55635553, -), CAediting_182911(55635559, -), CAediting_182912(55639027, -), CAediting_182913(55639057, -), CAediting_182914(55640259, -), CAediting_182915(55640322, -), CAediting_182916(55641102, -), CAediting_182917(55641140, -), CAediting_182918(55641142, -), CAediting_182919(55641407, -), CAediting_182920(55641440, -), CAediting_182921(55641448, -), CAediting_182922(55643028, -), CAediting_182923(55645162, -), CAediting_182924(55645188, -), CAediting_182925(55645253, -), CAediting_182926(55649254, -), CAediting_182927(55652883, -), CAediting_182928(55654827, -), CAediting_182929(55657084, -), CAediting_182930(55657132, -), CAediting_182931(55657157, -), CAediting_182932(55657163, -), CAediting_182933(55657166, -), CAediting_182934(55657205, -), CAediting_182935(55657207, -), CAediting_182936(55657229, -), CAediting_182937(55657243, -), CAediting_182938(55657246, -), CAediting_182939(55657272, -), CAediting_182940(55657283, -), CAediting_182941(55658003, -), CAediting_182942(55658109, -), CAediting_182943(55658111, -), CAediting_182944(55658121, -), CAediting_182945(55658125, -), CAediting_182946(55658133, -), CAediting_182947(55658150, -), CAediting_182948(55658157, -), CAediting_182949(55658176, -), CAediting_182950(55658189, -), CAediting_182951(55658195, -), CAediting_182952(55658219, -), CAediting_182953(55658231, -), CAediting_182954(55659083, -), CAediting_182955(55659093, -), CAediting_182956(55659095, -), CAediting_182957(55659119, -), CAediting_182958(55659125, -), CAediting_182959(55659155, -), CAediting_182960(55659174, -), CAediting_182961(55659175, -), CAediting_182962(55659180, -), CAediting_182963(55659227, -), CAediting_182964(55659228, -), CAediting_182965(55659234, -), CAediting_182966(55659241, -), CAediting_182967(55659980, -), CAediting_182968(55659982, -), CAediting_182969(55659996, -), CAediting_182970(55660028, -), CAediting_182971(55660047, -), CAediting_182972(55660102, -), CAediting_182973(55661185, -), CAediting_182974(55661189, -), CAediting_182975(55661198, -), CAediting_182976(55661199, -), CAediting_182977(55661213, -), CAediting_182978(55661221, -), CAediting_182979(55661231, -), CAediting_182980(55661257, -), CAediting_182981(55661268, -), CAediting_182982(55661269, -), CAediting_182983(55661275, -), CAediting_182984(55661297, -), CAediting_182985(55661312, -), CAediting_182986(55661362, -), CAediting_182987(55661363, -), CAediting_182988(55662432, -), CAediting_182989(55662490, -), CAediting_182990(55662526, -), CAediting_182991(55662668, -), CAediting_182992(55662938, -), CAediting_182993(55662946, -), CAediting_182994(55662973, -), CAediting_182995(55662977, -), CAediting_182996(55662978, -), CAediting_182997(55662992, -), CAediting_182998(55663089, -), CAediting_182999(55663130, -), CAediting_183000(55663157, -), CAediting_183001(55663744, -), CAediting_183002(55664417, -), CAediting_183003(55666334, -), CAediting_183004(55666415, -), CAediting_183005(55666578, -), CAediting_183006(55666637, -), CAediting_183007(55666647, -), CAediting_183008(55666674, -), CAediting_183009(55666760, -), CAediting_183010(55666780, -), CAediting_183011(55666790, -), CAediting_183012(55666835, -), CAediting_183013(55673521, -), CAediting_183014(55673587, -), CAediting_183015(55673720, -), CAediting_183016(55673727, -), CAediting_183017(55673877, -), CAediting_183018(55673955, -), CAediting_183019(55673982, -), CAediting_183020(55673995, -), CAediting_183021(55674421, -), CAediting_183022(55675013, -), CAediting_183023(55675016, -), CAediting_183024(55675017, -), CAediting_183025(55675089, -), CAediting_183026(55675185, -), CAediting_183027(55675328, -), CAediting_183028(55675694, -), CAediting_183029(55676026, -), CAediting_183030(55676035, -), CAediting_183031(55676058, -), CAediting_183032(55677351, -), CAediting_183033(55677411, -), CAediting_183034(55677867, -), CAediting_183035(55677877, -), CAediting_183036(55688109, -), CAediting_183037(55688163, -), CAediting_183038(55688167, -), CAediting_183039(55688181, -), CAediting_183040(55688185, -), CAediting_183041(55688187, -), CAediting_183042(55688197, -), CAediting_183043(55688203, -), CAediting_183044(55688207, -), CAediting_183045(55688210, -), CAediting_183046(55688219, -), CAediting_183047(55688239, -), CAediting_183048(55688286, -), CAediting_183049(55692023, -), CAediting_183050(55692024, -), CAediting_183051(55692060, -), CAediting_183052(55692061, -), CAediting_183053(55692063, -), CAediting_183054(55692064, -),

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RNA editing positional annotations for PNPT1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_182835	chr2_55634297_-	UTR3
CAediting_182836	chr2_55634299_-	UTR3
CAediting_182837	chr2_55634314_-	UTR3
CAediting_182838	chr2_55634327_-	UTR3
CAediting_182839	chr2_55634334_-	UTR3
CAediting_182840	chr2_55634338_-	UTR3
CAediting_182841	chr2_55634345_-	UTR3
CAediting_182842	chr2_55634351_-	UTR3
CAediting_182843	chr2_55634359_-	UTR3
CAediting_182844	chr2_55634364_-	UTR3
CAediting_182845	chr2_55634367_-	UTR3
CAediting_182846	chr2_55634373_-	UTR3
CAediting_182847	chr2_55634383_-	UTR3
CAediting_182848	chr2_55634390_-	UTR3
CAediting_182849	chr2_55634399_-	UTR3
CAediting_182850	chr2_55634400_-	UTR3
CAediting_182851	chr2_55634426_-	UTR3
CAediting_182852	chr2_55634435_-	UTR3
CAediting_182853	chr2_55634444_-	UTR3
CAediting_182854	chr2_55634450_-	UTR3
CAediting_182855	chr2_55634466_-	UTR3
CAediting_182856	chr2_55634475_-	UTR3
CAediting_182857	chr2_55634480_-	UTR3
CAediting_182858	chr2_55634489_-	UTR3
CAediting_182859	chr2_55634494_-	UTR3
CAediting_182860	chr2_55634529_-	UTR3
CAediting_182861	chr2_55634534_-	UTR3
CAediting_182862	chr2_55634535_-	UTR3
CAediting_182863	chr2_55634583_-	UTR3
CAediting_182864	chr2_55634585_-	UTR3
CAediting_182865	chr2_55634608_-	UTR3
CAediting_182866	chr2_55634616_-	UTR3
CAediting_182867	chr2_55634623_-	UTR3
CAediting_182868	chr2_55634628_-	UTR3
CAediting_182869	chr2_55634645_-	UTR3
CAediting_182870	chr2_55634652_-	UTR3
CAediting_182871	chr2_55634653_-	UTR3
CAediting_182872	chr2_55634664_-	UTR3
CAediting_182873	chr2_55634667_-	UTR3
CAediting_182874	chr2_55634684_-	UTR3
CAediting_182875	chr2_55634693_-	UTR3
CAediting_182876	chr2_55634694_-	UTR3
CAediting_182877	chr2_55634720_-	UTR3
CAediting_182878	chr2_55634744_-	UTR3
CAediting_182879	chr2_55634780_-	UTR3
CAediting_182880	chr2_55634783_-	UTR3
CAediting_182881	chr2_55634793_-	UTR3
CAediting_182882	chr2_55634807_-	UTR3
CAediting_182883	chr2_55634823_-	UTR3
CAediting_182884	chr2_55634828_-	UTR3
CAediting_182885	chr2_55634835_-	UTR3
CAediting_182886	chr2_55634837_-	UTR3
CAediting_182887	chr2_55634851_-	splicing
CAediting_182888	chr2_55634888_-	UTR3
CAediting_182889	chr2_55635372_-	UTR3
CAediting_182890	chr2_55635382_-	UTR3
CAediting_182891	chr2_55635387_-	UTR3
CAediting_182892	chr2_55635407_-	UTR3
CAediting_182893	chr2_55635412_-	UTR3
CAediting_182894	chr2_55635423_-	UTR3
CAediting_182895	chr2_55635439_-	UTR3
CAediting_182896	chr2_55635443_-	UTR3
CAediting_182897	chr2_55635452_-	UTR3
CAediting_182898	chr2_55635453_-	UTR3
CAediting_182899	chr2_55635479_-	UTR3
CAediting_182900	chr2_55635491_-	UTR3
CAediting_182901	chr2_55635493_-	UTR3
CAediting_182902	chr2_55635497_-	UTR3
CAediting_182903	chr2_55635508_-	UTR3
CAediting_182904	chr2_55635510_-	UTR3
CAediting_182905	chr2_55635516_-	UTR3
CAediting_182906	chr2_55635518_-	UTR3
CAediting_182907	chr2_55635531_-	UTR3
CAediting_182908	chr2_55635533_-	UTR3
CAediting_182909	chr2_55635542_-	UTR3
CAediting_182910	chr2_55635553_-	UTR3
CAediting_182911	chr2_55635559_-	UTR3
CAediting_182912	chr2_55639027_-	ncRNA_intronic
CAediting_182913	chr2_55639057_-	ncRNA_intronic
CAediting_182914	chr2_55640259_-	ncRNA_intronic
CAediting_182915	chr2_55640322_-	ncRNA_intronic
CAediting_182916	chr2_55641102_-	ncRNA_intronic
CAediting_182917	chr2_55641140_-	ncRNA_intronic
CAediting_182918	chr2_55641142_-	ncRNA_intronic
CAediting_182919	chr2_55641407_-	ncRNA_intronic
CAediting_182920	chr2_55641440_-	ncRNA_intronic
CAediting_182921	chr2_55641448_-	ncRNA_intronic
CAediting_182922	chr2_55643028_-	ncRNA_intronic
CAediting_182923	chr2_55645162_-	ncRNA_exonic
CAediting_182924	chr2_55645188_-	ncRNA_exonic
CAediting_182925	chr2_55645253_-	ncRNA_exonic
CAediting_182926	chr2_55649254_-	intronic
CAediting_182927	chr2_55652883_-	intronic
CAediting_182928	chr2_55654827_-	intronic
CAediting_182929	chr2_55657084_-	intronic
CAediting_182930	chr2_55657132_-	intronic
CAediting_182931	chr2_55657157_-	intronic
CAediting_182932	chr2_55657163_-	intronic
CAediting_182933	chr2_55657166_-	intronic
CAediting_182934	chr2_55657205_-	intronic
CAediting_182935	chr2_55657207_-	intronic
CAediting_182936	chr2_55657229_-	intronic
CAediting_182937	chr2_55657243_-	intronic
CAediting_182938	chr2_55657246_-	intronic
CAediting_182939	chr2_55657272_-	intronic
CAediting_182940	chr2_55657283_-	intronic
CAediting_182941	chr2_55658003_-	intronic
CAediting_182942	chr2_55658109_-	intronic
CAediting_182943	chr2_55658111_-	intronic
CAediting_182944	chr2_55658121_-	intronic
CAediting_182945	chr2_55658125_-	intronic
CAediting_182946	chr2_55658133_-	intronic
CAediting_182947	chr2_55658150_-	intronic
CAediting_182948	chr2_55658157_-	intronic
CAediting_182949	chr2_55658176_-	intronic
CAediting_182950	chr2_55658189_-	intronic
CAediting_182951	chr2_55658195_-	intronic
CAediting_182952	chr2_55658219_-	intronic
CAediting_182953	chr2_55658231_-	intronic
CAediting_182954	chr2_55659083_-	intronic
CAediting_182955	chr2_55659093_-	intronic
CAediting_182956	chr2_55659095_-	intronic
CAediting_182957	chr2_55659119_-	intronic
CAediting_182958	chr2_55659125_-	intronic
CAediting_182959	chr2_55659155_-	intronic
CAediting_182960	chr2_55659174_-	intronic
CAediting_182961	chr2_55659175_-	intronic
CAediting_182962	chr2_55659180_-	intronic
CAediting_182963	chr2_55659227_-	intronic
CAediting_182964	chr2_55659228_-	intronic
CAediting_182965	chr2_55659234_-	intronic
CAediting_182966	chr2_55659241_-	intronic
CAediting_182967	chr2_55659980_-	intronic
CAediting_182968	chr2_55659982_-	intronic
CAediting_182969	chr2_55659996_-	intronic
CAediting_182970	chr2_55660028_-	intronic
CAediting_182971	chr2_55660047_-	intronic
CAediting_182972	chr2_55660102_-	intronic
CAediting_182973	chr2_55661185_-	intronic
CAediting_182974	chr2_55661189_-	intronic
CAediting_182975	chr2_55661198_-	intronic
CAediting_182976	chr2_55661199_-	intronic
CAediting_182977	chr2_55661213_-	intronic
CAediting_182978	chr2_55661221_-	intronic
CAediting_182979	chr2_55661231_-	intronic
CAediting_182980	chr2_55661257_-	intronic
CAediting_182981	chr2_55661268_-	intronic
CAediting_182982	chr2_55661269_-	intronic
CAediting_182983	chr2_55661275_-	intronic
CAediting_182984	chr2_55661297_-	intronic
CAediting_182985	chr2_55661312_-	intronic
CAediting_182986	chr2_55661362_-	intronic
CAediting_182987	chr2_55661363_-	intronic
CAediting_182988	chr2_55662432_-	intronic
CAediting_182989	chr2_55662490_-	intronic
CAediting_182990	chr2_55662526_-	intronic
CAediting_182991	chr2_55662668_-	intronic
CAediting_182992	chr2_55662938_-	intronic
CAediting_182993	chr2_55662946_-	intronic
CAediting_182994	chr2_55662973_-	intronic
CAediting_182995	chr2_55662977_-	intronic
CAediting_182996	chr2_55662978_-	intronic
CAediting_182997	chr2_55662992_-	intronic
CAediting_182998	chr2_55663089_-	intronic
CAediting_182999	chr2_55663130_-	intronic
CAediting_183000	chr2_55663157_-	intronic
CAediting_183001	chr2_55663744_-	intronic
CAediting_183002	chr2_55664417_-	intronic
CAediting_183003	chr2_55666334_-	intronic
CAediting_183004	chr2_55666415_-	intronic
CAediting_183005	chr2_55666578_-	intronic
CAediting_183006	chr2_55666637_-	intronic
CAediting_183007	chr2_55666647_-	intronic
CAediting_183008	chr2_55666674_-	intronic
CAediting_183009	chr2_55666760_-	intronic
CAediting_183010	chr2_55666780_-	intronic
CAediting_183011	chr2_55666790_-	intronic
CAediting_183012	chr2_55666835_-	intronic
CAediting_183013	chr2_55673521_-	intronic
CAediting_183014	chr2_55673587_-	intronic
CAediting_183015	chr2_55673720_-	intronic
CAediting_183016	chr2_55673727_-	intronic
CAediting_183017	chr2_55673877_-	intronic
CAediting_183018	chr2_55673955_-	intronic
CAediting_183019	chr2_55673982_-	intronic
CAediting_183020	chr2_55673995_-	intronic
CAediting_183021	chr2_55674421_-	intronic
CAediting_183022	chr2_55675013_-	intronic
CAediting_183023	chr2_55675016_-	intronic
CAediting_183024	chr2_55675017_-	intronic
CAediting_183025	chr2_55675089_-	intronic
CAediting_183026	chr2_55675185_-	intronic
CAediting_183027	chr2_55675328_-	intronic
CAediting_183028	chr2_55675694_-	intronic
CAediting_183029	chr2_55676026_-	intronic
CAediting_183030	chr2_55676035_-	intronic
CAediting_183031	chr2_55676058_-	intronic
CAediting_183032	chr2_55677351_-	intronic
CAediting_183033	chr2_55677411_-	intronic
CAediting_183034	chr2_55677867_-	intronic
CAediting_183035	chr2_55677877_-	intronic
CAediting_183036	chr2_55688109_-	intronic
CAediting_183037	chr2_55688163_-	intronic
CAediting_183038	chr2_55688167_-	intronic
CAediting_183039	chr2_55688181_-	intronic
CAediting_183040	chr2_55688185_-	intronic
CAediting_183041	chr2_55688187_-	intronic
CAediting_183042	chr2_55688197_-	intronic
CAediting_183043	chr2_55688203_-	intronic
CAediting_183044	chr2_55688207_-	intronic
CAediting_183045	chr2_55688210_-	intronic
CAediting_183046	chr2_55688219_-	intronic
CAediting_183047	chr2_55688239_-	intronic
CAediting_183048	chr2_55688286_-	intronic
CAediting_183049	chr2_55692023_-	intronic
CAediting_183050	chr2_55692024_-	intronic
CAediting_183051	chr2_55692060_-	intronic
CAediting_183052	chr2_55692061_-	intronic
CAediting_183053	chr2_55692063_-	intronic
CAediting_183054	chr2_55692064_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_182835	chr2_55634297_-	SINE	Alu	AluSx1
CAediting_182836	chr2_55634299_-	SINE	Alu	AluSx1
CAediting_182837	chr2_55634314_-	SINE	Alu	AluSx1
CAediting_182838	chr2_55634327_-	SINE	Alu	AluSx1
CAediting_182839	chr2_55634334_-	SINE	Alu	AluSx1
CAediting_182840	chr2_55634338_-	SINE	Alu	AluSx1
CAediting_182841	chr2_55634345_-	SINE	Alu	AluSx1
CAediting_182842	chr2_55634351_-	SINE	Alu	AluSx1
CAediting_182843	chr2_55634359_-	SINE	Alu	AluSx1
CAediting_182844	chr2_55634364_-	SINE	Alu	AluSx1
CAediting_182845	chr2_55634367_-	SINE	Alu	AluSx1
CAediting_182846	chr2_55634373_-	SINE	Alu	AluSx1
CAediting_182847	chr2_55634383_-	SINE	Alu	AluSx1
CAediting_182848	chr2_55634390_-	SINE	Alu	AluSx1
CAediting_182849	chr2_55634399_-	SINE	Alu	AluSx1
CAediting_182850	chr2_55634400_-	SINE	Alu	AluSx1
CAediting_182851	chr2_55634426_-	SINE	Alu	AluSx1
CAediting_182852	chr2_55634435_-	SINE	Alu	AluSx1
CAediting_182853	chr2_55634444_-	SINE	Alu	AluSx1
CAediting_182854	chr2_55634450_-	SINE	Alu	AluSx1
CAediting_182855	chr2_55634466_-	SINE	Alu	AluSx1
CAediting_182856	chr2_55634475_-	SINE	Alu	AluSx1
CAediting_182857	chr2_55634480_-	SINE	Alu	AluSx1
CAediting_182858	chr2_55634489_-	SINE	Alu	AluSx1
CAediting_182859	chr2_55634494_-	SINE	Alu	AluSx1
CAediting_182860	chr2_55634529_-	SINE	Alu	AluSx1
CAediting_182861	chr2_55634534_-	SINE	Alu	AluSx1
CAediting_182862	chr2_55634535_-	SINE	Alu	AluSx1
CAediting_182863	chr2_55634583_-	SINE	Alu	AluSq
CAediting_182864	chr2_55634585_-	SINE	Alu	AluSq
CAediting_182865	chr2_55634608_-	SINE	Alu	AluSq
CAediting_182866	chr2_55634616_-	SINE	Alu	AluSq
CAediting_182867	chr2_55634623_-	SINE	Alu	AluSq
CAediting_182868	chr2_55634628_-	SINE	Alu	AluSq
CAediting_182869	chr2_55634645_-	SINE	Alu	AluSq
CAediting_182870	chr2_55634652_-	SINE	Alu	AluSq
CAediting_182871	chr2_55634653_-	SINE	Alu	AluSq
CAediting_182872	chr2_55634664_-	SINE	Alu	AluSq
CAediting_182873	chr2_55634667_-	SINE	Alu	AluSq
CAediting_182874	chr2_55634684_-	SINE	Alu	AluSq
CAediting_182875	chr2_55634693_-	SINE	Alu	AluSq
CAediting_182876	chr2_55634694_-	SINE	Alu	AluSq
CAediting_182877	chr2_55634720_-	SINE	Alu	AluSq
CAediting_182878	chr2_55634744_-	SINE	Alu	AluSq
CAediting_182879	chr2_55634780_-	SINE	Alu	AluSq
CAediting_182880	chr2_55634783_-	SINE	Alu	AluSq
CAediting_182881	chr2_55634793_-	SINE	Alu	AluSq
CAediting_182882	chr2_55634807_-	SINE	Alu	AluSq
CAediting_182883	chr2_55634823_-	SINE	Alu	AluSq
CAediting_182884	chr2_55634828_-	SINE	Alu	AluSq
CAediting_182885	chr2_55634835_-	SINE	Alu	AluSq
CAediting_182886	chr2_55634837_-	SINE	Alu	AluSq
CAediting_182887	chr2_55634851_-	SINE	Alu	AluSq
CAediting_182888	chr2_55634888_-	SINE	Alu	AluJr
CAediting_182889	chr2_55635372_-	SINE	Alu	AluSc8
CAediting_182890	chr2_55635382_-	SINE	Alu	AluSc8
CAediting_182891	chr2_55635387_-	SINE	Alu	AluSc8
CAediting_182892	chr2_55635407_-	SINE	Alu	AluSc8
CAediting_182893	chr2_55635412_-	SINE	Alu	AluSc8
CAediting_182894	chr2_55635423_-	SINE	Alu	AluSc8
CAediting_182895	chr2_55635439_-	SINE	Alu	AluSc8
CAediting_182896	chr2_55635443_-	SINE	Alu	AluSc8
CAediting_182897	chr2_55635452_-	SINE	Alu	AluSc8
CAediting_182898	chr2_55635453_-	SINE	Alu	AluSc8
CAediting_182899	chr2_55635479_-	SINE	Alu	AluSc8
CAediting_182900	chr2_55635491_-	SINE	Alu	AluSc8
CAediting_182901	chr2_55635493_-	SINE	Alu	AluSc8
CAediting_182902	chr2_55635497_-	SINE	Alu	AluSc8
CAediting_182903	chr2_55635508_-	SINE	Alu	AluSc8
CAediting_182904	chr2_55635510_-	SINE	Alu	AluSc8
CAediting_182905	chr2_55635516_-	SINE	Alu	AluSc8
CAediting_182906	chr2_55635518_-	SINE	Alu	AluSc8
CAediting_182907	chr2_55635531_-	SINE	Alu	AluSc8
CAediting_182908	chr2_55635533_-	SINE	Alu	AluSc8
CAediting_182909	chr2_55635542_-	SINE	Alu	AluSc8
CAediting_182910	chr2_55635553_-	SINE	Alu	AluSc8
CAediting_182911	chr2_55635559_-	SINE	Alu	AluSc8
CAediting_182912	chr2_55639027_-	SINE	Alu	AluSz
CAediting_182913	chr2_55639057_-	SINE	Alu	AluSz
CAediting_182914	chr2_55640259_-	SINE	Alu	AluSc
CAediting_182915	chr2_55640322_-	SINE	Alu	AluSc
CAediting_182916	chr2_55641102_-	SINE	Alu	AluSc
CAediting_182917	chr2_55641140_-	SINE	Alu	AluSc
CAediting_182918	chr2_55641142_-	SINE	Alu	AluSc
CAediting_182919	chr2_55641407_-	SINE	Alu	AluSx
CAediting_182920	chr2_55641440_-	SINE	Alu	AluSx
CAediting_182921	chr2_55641448_-	SINE	Alu	AluSx
CAediting_182922	chr2_55643028_-	SINE	Alu	AluJr
CAediting_182923	chr2_55645162_-	SINE	Alu	AluY
CAediting_182924	chr2_55645188_-	SINE	Alu	AluY
CAediting_182925	chr2_55645253_-	SINE	Alu	AluY
CAediting_182926	chr2_55649254_-	SINE	Alu	AluJo
CAediting_182927	chr2_55652883_-	SINE	Alu	AluSz
CAediting_182928	chr2_55654827_-	SINE	Alu	AluJr
CAediting_182929	chr2_55657084_-	SINE	Alu	AluSz
CAediting_182930	chr2_55657132_-	SINE	Alu	AluSz
CAediting_182931	chr2_55657157_-	SINE	Alu	AluSz
CAediting_182932	chr2_55657163_-	SINE	Alu	AluSz
CAediting_182933	chr2_55657166_-	SINE	Alu	AluSz
CAediting_182934	chr2_55657205_-	SINE	Alu	AluSz
CAediting_182935	chr2_55657207_-	SINE	Alu	AluSz
CAediting_182936	chr2_55657229_-	SINE	Alu	AluSz
CAediting_182937	chr2_55657243_-	SINE	Alu	AluSz
CAediting_182938	chr2_55657246_-	SINE	Alu	AluSz
CAediting_182939	chr2_55657272_-	SINE	Alu	AluSz
CAediting_182940	chr2_55657283_-	SINE	Alu	AluSz
CAediting_182941	chr2_55658003_-	SINE	Alu	AluJb
CAediting_182942	chr2_55658109_-	SINE	Alu	AluJb
CAediting_182943	chr2_55658111_-	SINE	Alu	AluJb
CAediting_182944	chr2_55658121_-	SINE	Alu	AluJb
CAediting_182945	chr2_55658125_-	SINE	Alu	AluJb
CAediting_182946	chr2_55658133_-	SINE	Alu	AluJb
CAediting_182947	chr2_55658150_-	SINE	Alu	AluJb
CAediting_182948	chr2_55658157_-	SINE	Alu	AluJb
CAediting_182949	chr2_55658176_-	SINE	Alu	AluJb
CAediting_182950	chr2_55658189_-	SINE	Alu	AluJb
CAediting_182951	chr2_55658195_-	SINE	Alu	AluJb
CAediting_182952	chr2_55658219_-	SINE	Alu	AluJb
CAediting_182953	chr2_55658231_-	SINE	Alu	AluJb
CAediting_182954	chr2_55659083_-	SINE	Alu	AluJr
CAediting_182955	chr2_55659093_-	SINE	Alu	AluJr
CAediting_182956	chr2_55659095_-	SINE	Alu	AluJr
CAediting_182957	chr2_55659119_-	SINE	Alu	AluJr
CAediting_182958	chr2_55659125_-	SINE	Alu	AluJr
CAediting_182959	chr2_55659155_-	SINE	Alu	AluJr
CAediting_182960	chr2_55659174_-	SINE	Alu	AluJr
CAediting_182961	chr2_55659175_-	SINE	Alu	AluJr
CAediting_182962	chr2_55659180_-	SINE	Alu	AluJr
CAediting_182963	chr2_55659227_-	SINE	Alu	AluJr
CAediting_182964	chr2_55659228_-	SINE	Alu	AluJr
CAediting_182965	chr2_55659234_-	SINE	Alu	AluJr
CAediting_182966	chr2_55659241_-	SINE	Alu	AluJr
CAediting_182967	chr2_55659980_-	SINE	Alu	AluJb
CAediting_182968	chr2_55659982_-	SINE	Alu	AluJb
CAediting_182969	chr2_55659996_-	SINE	Alu	AluJb
CAediting_182970	chr2_55660028_-	SINE	Alu	AluJb
CAediting_182971	chr2_55660047_-	SINE	Alu	AluJb
CAediting_182972	chr2_55660102_-	SINE	Alu	AluJb
CAediting_182973	chr2_55661185_-	SINE	Alu	AluY
CAediting_182974	chr2_55661189_-	SINE	Alu	AluY
CAediting_182975	chr2_55661198_-	SINE	Alu	AluY
CAediting_182976	chr2_55661199_-	SINE	Alu	AluY
CAediting_182977	chr2_55661213_-	SINE	Alu	AluY
CAediting_182978	chr2_55661221_-	SINE	Alu	AluY
CAediting_182979	chr2_55661231_-	SINE	Alu	AluY
CAediting_182980	chr2_55661257_-	SINE	Alu	AluY
CAediting_182981	chr2_55661268_-	SINE	Alu	AluY
CAediting_182982	chr2_55661269_-	SINE	Alu	AluY
CAediting_182983	chr2_55661275_-	SINE	Alu	AluY
CAediting_182984	chr2_55661297_-	SINE	Alu	AluY
CAediting_182985	chr2_55661312_-	SINE	Alu	AluY
CAediting_182986	chr2_55661362_-	SINE	Alu	AluY
CAediting_182987	chr2_55661363_-	SINE	Alu	AluY
CAediting_182988	chr2_55662432_-	SINE	Alu	AluSx4
CAediting_182989	chr2_55662490_-	SINE	Alu	AluSx4
CAediting_182990	chr2_55662526_-	SINE	Alu	AluSx4
CAediting_182991	chr2_55662668_-	SINE	Alu	AluSx4
CAediting_182992	chr2_55662938_-	SINE	Alu	AluSc8
CAediting_182993	chr2_55662946_-	SINE	Alu	AluSc8
CAediting_182994	chr2_55662973_-	SINE	Alu	AluSc8
CAediting_182995	chr2_55662977_-	SINE	Alu	AluSc8
CAediting_182996	chr2_55662978_-	SINE	Alu	AluSc8
CAediting_182997	chr2_55662992_-	SINE	Alu	AluSc8
CAediting_182998	chr2_55663089_-	SINE	Alu	AluSc8
CAediting_182999	chr2_55663130_-	SINE	Alu	AluSc8
CAediting_183000	chr2_55663157_-	SINE	Alu	AluSc8
CAediting_183001	chr2_55663744_-	SINE	Alu	AluY
CAediting_183002	chr2_55664417_-	SINE	Alu	AluJo
CAediting_183003	chr2_55666334_-	SINE	Alu	AluJr
CAediting_183004	chr2_55666415_-	SINE	Alu	AluJr
CAediting_183005	chr2_55666578_-	SINE	Alu	AluJr
CAediting_183006	chr2_55666637_-	SINE	Alu	AluJr
CAediting_183007	chr2_55666647_-	SINE	Alu	AluJr
CAediting_183008	chr2_55666674_-	SINE	Alu	AluJr
CAediting_183009	chr2_55666760_-	SINE	Alu	AluJr
CAediting_183010	chr2_55666780_-	SINE	Alu	AluJr
CAediting_183011	chr2_55666790_-	SINE	Alu	AluJr
CAediting_183012	chr2_55666835_-	SINE	Alu	AluJr
CAediting_183013	chr2_55673521_-	SINE	Alu	AluY
CAediting_183014	chr2_55673587_-	SINE	Alu	AluY
CAediting_183015	chr2_55673720_-	SINE	Alu	AluY
CAediting_183016	chr2_55673727_-	SINE	Alu	AluY
CAediting_183017	chr2_55673877_-	SINE	Alu	AluSx
CAediting_183018	chr2_55673955_-	SINE	Alu	AluSx
CAediting_183019	chr2_55673982_-	SINE	Alu	AluSx
CAediting_183020	chr2_55673995_-	SINE	Alu	AluSx
CAediting_183021	chr2_55674421_-	SINE	Alu	AluSx
CAediting_183022	chr2_55675013_-	SINE	Alu	AluJr4
CAediting_183023	chr2_55675016_-	SINE	Alu	AluJr4
CAediting_183024	chr2_55675017_-	SINE	Alu	AluJr4
CAediting_183025	chr2_55675089_-	SINE	Alu	AluJr4
CAediting_183026	chr2_55675185_-	SINE	Alu	AluJr4
CAediting_183027	chr2_55675328_-	SINE	Alu	AluJr
CAediting_183028	chr2_55675694_-	SINE	Alu	AluJr
CAediting_183029	chr2_55676026_-	SINE	Alu	AluSx
CAediting_183030	chr2_55676035_-	SINE	Alu	AluSx
CAediting_183031	chr2_55676058_-	SINE	Alu	AluSx
CAediting_183032	chr2_55677351_-	SINE	Alu	AluSz6
CAediting_183033	chr2_55677411_-	SINE	Alu	AluSz6
CAediting_183034	chr2_55677867_-	SINE	Alu	AluY
CAediting_183035	chr2_55677877_-	SINE	Alu	AluY
CAediting_183036	chr2_55688109_-	SINE	Alu	AluJr
CAediting_183037	chr2_55688163_-	SINE	Alu	AluJr
CAediting_183038	chr2_55688167_-	SINE	Alu	AluJr
CAediting_183039	chr2_55688181_-	SINE	Alu	AluJr
CAediting_183040	chr2_55688185_-	SINE	Alu	AluJr
CAediting_183041	chr2_55688187_-	SINE	Alu	AluJr
CAediting_183042	chr2_55688197_-	SINE	Alu	AluJr
CAediting_183043	chr2_55688203_-	SINE	Alu	AluJr
CAediting_183044	chr2_55688207_-	SINE	Alu	AluJr
CAediting_183045	chr2_55688210_-	SINE	Alu	AluJr
CAediting_183046	chr2_55688219_-	SINE	Alu	AluJr
CAediting_183047	chr2_55688239_-	SINE	Alu	AluJr
CAediting_183048	chr2_55688286_-	SINE	Alu	AluJr
CAediting_183049	chr2_55692023_-	SINE	Alu	AluSq2
CAediting_183050	chr2_55692024_-	SINE	Alu	AluSq2
CAediting_183051	chr2_55692060_-	SINE	Alu	AluSq2
CAediting_183052	chr2_55692061_-	SINE	Alu	AluSq2
CAediting_183053	chr2_55692063_-	SINE	Alu	AluSq2
CAediting_183054	chr2_55692064_-	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for PNPT1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_182887	chr2_55634851_-	55634847:55634869	3SS	0+2i	ATGTAGGTATATCTGGCCAGGCA	0.98	ATGTAGGTATATCTGGCCGGGCA	-6.97
IR	CAediting_182911	chr2_55635559_-	55635555:55635563	5SS	0+2i	AGGCAGGCG	-20.59	AGGCGGGCG	-20.06

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000138035.13.PNPT1.

Correlation between RNA A-to-I editing and PSI for ENSG00000138035.13.PNPT1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PNPT1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PNPT1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PNPT1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_182898	chr2_55635453_-	ENSG00000138035.13	ENST00000260604	hsa-miR-513a-5p	55635452	55635458	7mer-m8	55635451	55635468	156.00	-21.01
CAediting_182898	chr2_55635453_-	ENSG00000138035.13	ENST00000260604	hsa-miR-513a-5p	55635452	55635458	7mer-m8	55635451	55635468	156.00	-21.01
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-200c-5p	55634581	55634587	7mer-m8	55634580	55634601	142.00	-11.82
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-4294	55634577	55634584	8mer-1a	55634577	55634594	141.00	-13.48
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-550a-3p	55634581	55634587	7mer-m8	55634580	55634606	153.00	-24.62
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-550a-3p	55634581	55634587	7mer-m8	55634580	55634606	153.00	-24.62
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-550a-3p	55634581	55634587	7mer-m8	55634580	55634606	153.00	-24.62
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-550b-3p	55634582	55634589	8mer-1a	55634582	55634606	143.00	-22.12
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-550b-3p	55634582	55634589	8mer-1a	55634582	55634606	143.00	-22.12
CAediting_182863	chr2_55634583_-	ENSG00000138035.13	ENST00000415374	hsa-miR-924	55634579	55634585	7mer-m8	55634578	55634597	145.00	-14.98
CAediting_182864	chr2_55634585_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6794-3p	55634583	55634590	8mer-1a	55634583	55634602	144.00	-13.38
CAediting_182867	chr2_55634623_-	ENSG00000138035.13	ENST00000415374	hsa-miR-4267	55634623	55634629	7mer-m8	55634622	55634637	150.00	-24.63
CAediting_182867	chr2_55634623_-	ENSG00000138035.13	ENST00000415374	hsa-miR-7977	55634621	55634627	7mer-m8	55634620	55634639	146.00	-22.30
CAediting_182868	chr2_55634628_-	ENSG00000138035.13	ENST00000415374	hsa-miR-324-3p	55634628	55634634	7mer-m8	55634627	55634649	157.00	-29.53
CAediting_182868	chr2_55634628_-	ENSG00000138035.13	ENST00000415374	hsa-miR-4690-3p	55634623	55634630	8mer-1a	55634623	55634642	161.00	-31.74
CAediting_182868	chr2_55634628_-	ENSG00000138035.13	ENST00000415374	hsa-miR-5685	55634623	55634630	8mer-1a	55634623	55634643	153.00	-19.34
CAediting_182869	chr2_55634645_-	ENSG00000138035.13	ENST00000415374	hsa-miR-1913	55634639	55634646	8mer-1a	55634639	55634660	147.00	-21.45
CAediting_182869	chr2_55634645_-	ENSG00000138035.13	ENST00000415374	hsa-miR-361-3p	55634644	55634650	7mer-m8	55634643	55634669	161.00	-29.38
CAediting_182870	chr2_55634652_-	ENSG00000138035.13	ENST00000415374	hsa-miR-3155a	55634648	55634654	7mer-m8	55634647	55634667	145.00	-19.96
CAediting_182870	chr2_55634652_-	ENSG00000138035.13	ENST00000415374	hsa-miR-3155b	55634648	55634654	7mer-m8	55634647	55634664	145.00	-19.57
CAediting_182870	chr2_55634652_-	ENSG00000138035.13	ENST00000415374	hsa-miR-484	55634648	55634654	7mer-m8	55634647	55634673	150.00	-24.63
CAediting_182871	chr2_55634653_-	ENSG00000138035.13	ENST00000415374	hsa-miR-9900	55634648	55634654	7mer-m8	55634647	55634666	163.00	-22.39
CAediting_182872	chr2_55634664_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6752-3p	55634664	55634670	7mer-m8	55634663	55634682	152.00	-24.77
CAediting_182872	chr2_55634664_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6801-3p	55634662	55634669	8mer-1a	55634662	55634681	148.00	-24.49
CAediting_182872	chr2_55634664_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6810-3p	55634662	55634669	8mer-1a	55634662	55634684	146.00	-24.94
CAediting_182875	chr2_55634693_-	ENSG00000138035.13	ENST00000415374	hsa-miR-8052	55634688	55634694	7mer-1a	55634688	55634708	141.00	-23.11
CAediting_182876	chr2_55634694_-	ENSG00000138035.13	ENST00000415374	hsa-miR-513a-5p	55634693	55634699	7mer-m8	55634692	55634709	140.00	-18.01
CAediting_182876	chr2_55634694_-	ENSG00000138035.13	ENST00000415374	hsa-miR-513a-5p	55634693	55634699	7mer-m8	55634692	55634709	140.00	-18.01
CAediting_182876	chr2_55634694_-	ENSG00000138035.13	ENST00000415374	hsa-miR-638	55634688	55634694	7mer-1a	55634688	55634712	155.00	-34.54
CAediting_182878	chr2_55634744_-	ENSG00000138035.13	ENST00000415374	hsa-miR-483-5p	55634741	55634747	7mer-m8	55634740	55634761	140.00	-14.01
CAediting_182879	chr2_55634780_-	ENSG00000138035.13	ENST00000415374	hsa-miR-4732-3p	55634780	55634786	7mer-m8	55634779	55634799	155.00	-22.25
CAediting_182891	chr2_55635387_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4301	55635386	55635392	7mer-m8	55635385	55635408	151.00	-21.33
CAediting_182891	chr2_55635387_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6075	55635382	55635389	8mer-1a	55635382	55635403	144.00	-21.10
CAediting_182894	chr2_55635423_-	ENSG00000138035.13	ENST00000260604	hsa-miR-145-3p	55635417	55635424	8mer-1a	55635417	55635438	140.00	-12.58
CAediting_182894	chr2_55635423_-	ENSG00000138035.13	ENST00000260604	hsa-miR-3059-5p	55635420	55635426	7mer-m8	55635419	55635445	150.00	-22.17
CAediting_182894	chr2_55635423_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6728-3p	55635423	55635428	6mer	55635422	55635442	141.00	-23.69
CAediting_182894	chr2_55635423_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6780a-3p	55635420	55635427	8mer-1a	55635420	55635441	158.00	-22.16
CAediting_182896	chr2_55635443_-	ENSG00000138035.13	ENST00000260604	hsa-miR-646	55635441	55635447	7mer-m8	55635440	55635458	141.00	-13.48
CAediting_182897	chr2_55635452_-	ENSG00000138035.13	ENST00000260604	hsa-miR-3117-3p	55635447	55635453	7mer-m8	55635446	55635468	153.00	-21.74
CAediting_182897	chr2_55635452_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4759	55635447	55635454	8mer-1a	55635447	55635468	146.00	-15.35
CAediting_182900	chr2_55635491_-	ENSG00000138035.13	ENST00000260604	hsa-miR-500a-3p	55635485	55635492	8mer-1a	55635485	55635507	145.00	-13.63
CAediting_182902	chr2_55635497_-	ENSG00000138035.13	ENST00000260604	hsa-miR-374b-3p	55635492	55635499	8mer-1a	55635492	55635514	147.00	-12.57
CAediting_182903	chr2_55635508_-	ENSG00000138035.13	ENST00000260604	hsa-miR-412-3p	55635508	55635514	7mer-m8	55635507	55635529	151.00	-19.78
CAediting_182903	chr2_55635508_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4508	55635503	55635509	7mer-m8	55635502	55635517	141.00	-24.29
CAediting_182903	chr2_55635508_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6754-3p	55635508	55635514	7mer-m8	55635507	55635527	146.00	-16.46
CAediting_182904	chr2_55635510_-	ENSG00000138035.13	ENST00000260604	hsa-miR-23a-5p	55635505	55635511	7mer-m8	55635504	55635526	144.00	-20.42
CAediting_182904	chr2_55635510_-	ENSG00000138035.13	ENST00000260604	hsa-miR-23b-5p	55635505	55635511	7mer-m8	55635504	55635524	144.00	-14.59
CAediting_182907	chr2_55635531_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6878-3p	55635528	55635534	7mer-m8	55635527	55635552	149.00	-20.85
CAediting_182908	chr2_55635533_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4281	55635528	55635535	8mer-1a	55635528	55635545	141.00	-19.58
CAediting_182866	chr2_55634616_-	ENSG00000138035.13	ENST00000415374	hsa-miR-4634	55634613	55634620	8mer-1a	55634613	55634633	146.00	-21.85
CAediting_182874	chr2_55634684_-	ENSG00000138035.13	ENST00000415374	hsa-miR-1207-3p	55634684	55634690	7mer-m8	55634683	55634700	140.00	-12.56
CAediting_182874	chr2_55634684_-	ENSG00000138035.13	ENST00000415374	hsa-miR-646	55634682	55634688	7mer-m8	55634681	55634699	145.00	-14.99
CAediting_182901	chr2_55635493_-	ENSG00000138035.13	ENST00000260604	hsa-miR-325	55635492	55635499	8mer-1a	55635492	55635514	141.00	-10.26
CAediting_182911	chr2_55635559_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4707-3p	55635556	55635562	7mer-m8	55635555	55635576	160.00	-28.37

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_182882	chr2_55634807_-	ENSG00000138035.13	ENST00000415374	hsa-miR-10397-5p	55634804	55634810	7mer-m8	55634803	55634826	151	-21.53
CAediting_182875	chr2_55634693_-	ENSG00000138035.13	ENST00000415374	hsa-miR-10399-5p	55634692	55634698	7mer-m8	55634691	55634710	141	-12.5
CAediting_182876	chr2_55634694_-	ENSG00000138035.13	ENST00000415374	hsa-miR-10399-5p	55634692	55634698	7mer-m8	55634691	55634710	141	-12.5
CAediting_182884	chr2_55634828_-	ENSG00000138035.13	ENST00000415374	hsa-miR-10399-5p	55634827	55634833	7mer-m8	55634826	55634847	148	-10
CAediting_182881	chr2_55634793_-	ENSG00000138035.13	ENST00000415374	hsa-miR-125a-3p	55634788	55634795	8mer-1a	55634788	55634809	148	-17.51
CAediting_182878	chr2_55634744_-	ENSG00000138035.13	ENST00000415374	hsa-miR-3170	55634744	55634750	7mer-m8	55634743	55634764	140	-13.8
CAediting_182879	chr2_55634780_-	ENSG00000138035.13	ENST00000415374	hsa-miR-4680-5p	55634776	55634781	6mer	55634775	55634795	146	-20.71
CAediting_182877	chr2_55634720_-	ENSG00000138035.13	ENST00000415374	hsa-miR-4735-5p	55634719	55634725	7mer-m8	55634718	55634739	140	-5.48
CAediting_182865	chr2_55634608_-	ENSG00000138035.13	ENST00000415374	hsa-miR-504-3p	55634603	55634610	8mer-1a	55634603	55634623	155	-23.82
CAediting_182875	chr2_55634693_-	ENSG00000138035.13	ENST00000415374	hsa-miR-5089-5p	55634688	55634694	7mer-m8	55634687	55634707	144	-13.27
CAediting_182883	chr2_55634823_-	ENSG00000138035.13	ENST00000415374	hsa-miR-5089-5p	55634822	55634829	8mer-1a	55634822	55634844	148	-14.19
CAediting_182884	chr2_55634828_-	ENSG00000138035.13	ENST00000415374	hsa-miR-5089-5p	55634822	55634829	8mer-1a	55634822	55634844	148	-14.19
CAediting_182885	chr2_55634835_-	ENSG00000138035.13	ENST00000415374	hsa-miR-552-3p	55634829	55634835	7mer-1a	55634829	55634849	140	-14.36
CAediting_182875	chr2_55634693_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6504-3p	55634692	55634698	7mer-m8	55634691	55634712	148	-14.75
CAediting_182876	chr2_55634694_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6504-3p	55634692	55634698	7mer-m8	55634691	55634712	148	-14.75
CAediting_182884	chr2_55634828_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6504-3p	55634827	55634833	7mer-m8	55634826	55634847	145	-14.48
CAediting_182883	chr2_55634823_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6513-5p	55634822	55634828	7mer-m8	55634821	55634842	147	-12.87
CAediting_182873	chr2_55634667_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6747-3p	55634664	55634671	8mer-1a	55634664	55634686	149	-23.42
CAediting_182869	chr2_55634645_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6778-3p	55634641	55634648	8mer-1a	55634641	55634659	143	-17.37
CAediting_182869	chr2_55634645_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6791-3p	55634641	55634647	7mer-1a	55634641	55634660	140	-22.49
CAediting_182869	chr2_55634645_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6836-3p	55634641	55634647	7mer-m8	55634640	55634660	145	-18.68
CAediting_182878	chr2_55634744_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6855-5p	55634744	55634750	7mer-m8	55634743	55634767	145	-17.8
CAediting_182874	chr2_55634684_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6869-5p	55634680	55634686	7mer-m8	55634679	55634703	149	-22.74
CAediting_182878	chr2_55634744_-	ENSG00000138035.13	ENST00000415374	hsa-miR-6890-5p	55634743	55634749	7mer-m8	55634742	55634762	142	-13.42
CAediting_182876	chr2_55634694_-	ENSG00000138035.13	ENST00000415374	hsa-miR-7151-3p	55634693	55634700	8mer-1a	55634693	55634713	140	-12.68
CAediting_182897	chr2_55635452_-	ENSG00000138035.13	ENST00000260604	hsa-miR-10399-5p	55635451	55635457	7mer-m8	55635450	55635471	148	-11.23
CAediting_182898	chr2_55635453_-	ENSG00000138035.13	ENST00000260604	hsa-miR-10399-5p	55635451	55635457	7mer-m8	55635450	55635471	148	-11.23
CAediting_182889	chr2_55635372_-	ENSG00000138035.13	ENST00000260604	hsa-miR-106a-3p	55635367	55635373	7mer-m8	55635366	55635385	144	-13.12
CAediting_182895	chr2_55635439_-	ENSG00000138035.13	ENST00000260604	hsa-miR-1200	55635436	55635442	7mer-m8	55635435	55635456	141	-16.6
CAediting_182891	chr2_55635387_-	ENSG00000138035.13	ENST00000260604	hsa-miR-1304-3p	55635386	55635391	6mer	55635385	55635406	155	-29.83
CAediting_182892	chr2_55635407_-	ENSG00000138035.13	ENST00000260604	hsa-miR-1343-3p	55635404	55635410	7mer-m8	55635403	55635424	140	-19.5
CAediting_182903	chr2_55635508_-	ENSG00000138035.13	ENST00000260604	hsa-miR-193b-5p	55635504	55635510	7mer-m8	55635503	55635524	142	-17.8
CAediting_182905	chr2_55635516_-	ENSG00000138035.13	ENST00000260604	hsa-miR-3152-3p	55635515	55635521	7mer-m8	55635514	55635534	145	-18.08
CAediting_182906	chr2_55635518_-	ENSG00000138035.13	ENST00000260604	hsa-miR-3152-3p	55635515	55635521	7mer-m8	55635514	55635534	145	-18.08
CAediting_182893	chr2_55635412_-	ENSG00000138035.13	ENST00000260604	hsa-miR-3616-5p	55635411	55635418	8mer-1a	55635411	55635431	145	-11.37
CAediting_182892	chr2_55635407_-	ENSG00000138035.13	ENST00000260604	hsa-miR-3940-5p	55635407	55635413	7mer-m8	55635406	55635425	150	-21.17
CAediting_182893	chr2_55635412_-	ENSG00000138035.13	ENST00000260604	hsa-miR-3940-5p	55635407	55635413	7mer-m8	55635406	55635425	150	-21.17
CAediting_182891	chr2_55635387_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4284	55635384	55635390	7mer-m8	55635383	55635400	151	-18.76
CAediting_182900	chr2_55635491_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4325	55635485	55635492	8mer-1a	55635485	55635502	143	-12.13
CAediting_182892	chr2_55635407_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4507	55635407	55635413	7mer-m8	55635406	55635425	150	-21.29
CAediting_182893	chr2_55635412_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4507	55635407	55635413	7mer-m8	55635406	55635425	150	-21.29
CAediting_182890	chr2_55635382_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4638-5p	55635380	55635387	8mer-1a	55635380	55635397	146	-17.91
CAediting_182894	chr2_55635423_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4659a-3p	55635420	55635426	7mer-m8	55635419	55635438	143	-10.85
CAediting_182894	chr2_55635423_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4659b-3p	55635420	55635426	7mer-m8	55635419	55635438	143	-12.05
CAediting_182911	chr2_55635559_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4763-5p	55635556	55635562	7mer-m8	55635555	55635576	148	-23.71
CAediting_182899	chr2_55635479_-	ENSG00000138035.13	ENST00000260604	hsa-miR-4775	55635479	55635485	7mer-m8	55635478	55635501	152	-6.06
CAediting_182893	chr2_55635412_-	ENSG00000138035.13	ENST00000260604	hsa-miR-573	55635411	55635418	8mer-1a	55635411	55635432	152	-16.93
CAediting_182897	chr2_55635452_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6504-3p	55635451	55635457	7mer-m8	55635450	55635471	148	-15.29
CAediting_182898	chr2_55635453_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6504-3p	55635451	55635457	7mer-m8	55635450	55635471	148	-15.29
CAediting_182889	chr2_55635372_-	ENSG00000138035.13	ENST00000260604	hsa-miR-652-3p	55635371	55635377	7mer-m8	55635370	55635391	154	-18.34
CAediting_182892	chr2_55635407_-	ENSG00000138035.13	ENST00000260604	hsa-miR-660-3p	55635402	55635408	7mer-m8	55635401	55635422	154	-19.98
CAediting_182892	chr2_55635407_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6742-3p	55635404	55635411	8mer-1a	55635404	55635423	150	-18.13
CAediting_182911	chr2_55635559_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6747-3p	55635557	55635563	7mer-m8	55635556	55635576	145	-15.68
CAediting_182892	chr2_55635407_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6783-3p	55635404	55635410	7mer-m8	55635403	55635424	142	-16.28
CAediting_182902	chr2_55635497_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6832-5p	55635496	55635502	7mer-m8	55635495	55635517	142	-16.66
CAediting_182895	chr2_55635439_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6869-5p	55635439	55635445	7mer-m8	55635438	55635462	142	-18.64
CAediting_182896	chr2_55635443_-	ENSG00000138035.13	ENST00000260604	hsa-miR-6869-5p	55635439	55635445	7mer-m8	55635438	55635462	142	-18.64
CAediting_182898	chr2_55635453_-	ENSG00000138035.13	ENST00000260604	hsa-miR-7151-3p	55635452	55635459	8mer-1a	55635452	55635468	142	-15.31

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000138035.13	ENST00000260604	hsa-miR-200b-3p	55667012	55667019	8mer-1a	55667012	55667034	143	-13.11
CAediting_77128	chr1_85133844_+	ENSG00000138035.13	ENST00000415374	hsa-miR-4423-3p	55635822	55635829	8mer-1a	55635822	55635842	140	-12.46
CAediting_1368054	chr19_46709310_-	ENSG00000138035.13	ENST00000260604	hsa-miR-320e	55635357	55635364	8mer-1a	55635357	55635374	151	-16.69
CAediting_77128	chr1_85133844_+	ENSG00000138035.13	ENST00000260604	hsa-miR-4423-3p	55635822	55635829	8mer-1a	55635822	55635842	140	-12.46

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000138035.13	ENST00000415374	hsa-miR-4423-3p	55635760	55635766	7mer-m8	55635759	55635779	140	-12.16
CAediting_77128	chr1_85133844_+	ENSG00000138035.13	ENST00000260604	hsa-miR-4423-3p	55635760	55635766	7mer-m8	55635759	55635779	140	-12.16

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PNPT1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000447944.5	protein_coding
ENST00000415374.4	nonsense_mediated_decay
ENST00000260604.7	nonsense_mediated_decay
ENST00000481066.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_182835	ENST00000447944.5	chr2_55634297_-	-1221.90	-1215.70	-1298.30
CAediting_182836	ENST00000447944.5	chr2_55634299_-	-1216.50	-1215.70	-1298.30
CAediting_182837	ENST00000447944.5	chr2_55634314_-	-1218.20	-1215.70	-1298.30
CAediting_182838	ENST00000447944.5	chr2_55634327_-	-1219.40	-1215.70	-1298.30
CAediting_182839	ENST00000447944.5	chr2_55634334_-	-1221.20	-1215.70	-1298.30
CAediting_182840	ENST00000447944.5	chr2_55634338_-	-1215.00	-1215.70	-1298.30
CAediting_182841	ENST00000447944.5	chr2_55634345_-	-1215.10	-1215.70	-1298.30
CAediting_182842	ENST00000447944.5	chr2_55634351_-	-1217.10	-1215.70	-1298.30
CAediting_182843	ENST00000447944.5	chr2_55634359_-	-1216.50	-1215.70	-1298.30
CAediting_182844	ENST00000447944.5	chr2_55634364_-	-1217.60	-1215.70	-1298.30
CAediting_182845	ENST00000447944.5	chr2_55634367_-	-1218.90	-1215.70	-1298.30
CAediting_182846	ENST00000447944.5	chr2_55634373_-	-1216.20	-1215.70	-1298.30
CAediting_182847	ENST00000447944.5	chr2_55634383_-	-1217.00	-1215.70	-1298.30
CAediting_182848	ENST00000447944.5	chr2_55634390_-	-1217.50	-1215.70	-1298.30
CAediting_182849	ENST00000447944.5	chr2_55634399_-	-1218.70	-1215.70	-1298.30
CAediting_182850	ENST00000447944.5	chr2_55634400_-	-1218.70	-1215.70	-1298.30
CAediting_182851	ENST00000447944.5	chr2_55634426_-	-1216.60	-1215.70	-1298.30
CAediting_182852	ENST00000447944.5	chr2_55634435_-	-1215.70	-1215.70	-1298.30
CAediting_182853	ENST00000447944.5	chr2_55634444_-	-1220.50	-1215.70	-1298.30
CAediting_182854	ENST00000447944.5	chr2_55634450_-	-1221.10	-1215.70	-1298.30
CAediting_182855	ENST00000447944.5	chr2_55634466_-	-1217.00	-1215.70	-1298.30
CAediting_182856	ENST00000447944.5	chr2_55634475_-	-1215.70	-1215.70	-1298.30
CAediting_182857	ENST00000447944.5	chr2_55634480_-	-1216.60	-1215.70	-1298.30
CAediting_182858	ENST00000447944.5	chr2_55634489_-	-1215.60	-1215.70	-1298.30
CAediting_182859	ENST00000447944.5	chr2_55634494_-	-1217.50	-1215.70	-1298.30
CAediting_182860	ENST00000447944.5	chr2_55634529_-	-1217.00	-1215.70	-1298.30
CAediting_182861	ENST00000447944.5	chr2_55634534_-	-1216.20	-1215.70	-1298.30
CAediting_182862	ENST00000447944.5	chr2_55634535_-	-1218.00	-1215.70	-1298.30
CAediting_182863	ENST00000447944.5	chr2_55634583_-	-1215.90	-1215.70	-1298.30
CAediting_182864	ENST00000447944.5	chr2_55634585_-	-1221.10	-1215.70	-1298.30
CAediting_182865	ENST00000447944.5	chr2_55634608_-	-1217.90	-1215.70	-1298.30
CAediting_182866	ENST00000447944.5	chr2_55634616_-	-1220.10	-1215.70	-1298.30
CAediting_182867	ENST00000447944.5	chr2_55634623_-	-1216.40	-1215.70	-1298.30
CAediting_182868	ENST00000447944.5	chr2_55634628_-	-1218.90	-1215.70	-1298.30
CAediting_182869	ENST00000447944.5	chr2_55634645_-	-1215.80	-1215.70	-1298.30
CAediting_182870	ENST00000447944.5	chr2_55634652_-	-1217.00	-1215.70	-1298.30
CAediting_182871	ENST00000447944.5	chr2_55634653_-	-1216.60	-1215.70	-1298.30
CAediting_182872	ENST00000447944.5	chr2_55634664_-	-1215.20	-1215.70	-1298.30
CAediting_182873	ENST00000447944.5	chr2_55634667_-	-1215.00	-1215.70	-1298.30
CAediting_182874	ENST00000447944.5	chr2_55634684_-	-1217.00	-1215.70	-1298.30
CAediting_182875	ENST00000447944.5	chr2_55634693_-	-1215.60	-1215.70	-1298.30
CAediting_182876	ENST00000447944.5	chr2_55634694_-	-1218.10	-1215.70	-1298.30
CAediting_182877	ENST00000447944.5	chr2_55634720_-	-1219.20	-1215.70	-1298.30
CAediting_182878	ENST00000447944.5	chr2_55634744_-	-1221.10	-1215.70	-1298.30
CAediting_182879	ENST00000447944.5	chr2_55634780_-	-1218.50	-1215.70	-1298.30
CAediting_182880	ENST00000447944.5	chr2_55634783_-	-1215.00	-1215.70	-1298.30
CAediting_182881	ENST00000447944.5	chr2_55634793_-	-1215.30	-1215.70	-1298.30
CAediting_182882	ENST00000447944.5	chr2_55634807_-	-1218.90	-1215.70	-1298.30
CAediting_182883	ENST00000447944.5	chr2_55634823_-	-1215.40	-1215.70	-1298.30
CAediting_182884	ENST00000447944.5	chr2_55634828_-	-1216.30	-1215.70	-1298.30
CAediting_182885	ENST00000447944.5	chr2_55634835_-	-1215.70	-1215.70	-1298.30
CAediting_182886	ENST00000447944.5	chr2_55634837_-	-1217.90	-1215.70	-1298.30
CAediting_182887	ENST00000447944.5	chr2_55634851_-	-1215.00	-1215.70	-1298.30
CAediting_182888	ENST00000447944.5	chr2_55634888_-	-1217.00	-1215.70	-1298.30
CAediting_182889	ENST00000447944.5	chr2_55635372_-	-1215.70	-1215.70	-1298.30
CAediting_182890	ENST00000447944.5	chr2_55635382_-	-1218.90	-1215.70	-1298.30
CAediting_182891	ENST00000447944.5	chr2_55635387_-	-1218.00	-1215.70	-1298.30
CAediting_182892	ENST00000447944.5	chr2_55635407_-	-1215.70	-1215.70	-1298.30
CAediting_182893	ENST00000447944.5	chr2_55635412_-	-1217.10	-1215.70	-1298.30
CAediting_182894	ENST00000447944.5	chr2_55635423_-	-1216.00	-1215.70	-1298.30
CAediting_182895	ENST00000447944.5	chr2_55635439_-	-1215.10	-1215.70	-1298.30
CAediting_182896	ENST00000447944.5	chr2_55635443_-	-1219.60	-1215.70	-1298.30
CAediting_182897	ENST00000447944.5	chr2_55635452_-	-1218.90	-1215.70	-1298.30
CAediting_182898	ENST00000447944.5	chr2_55635453_-	-1217.90	-1215.70	-1298.30
CAediting_182899	ENST00000447944.5	chr2_55635479_-	-1215.40	-1215.70	-1298.30
CAediting_182900	ENST00000447944.5	chr2_55635491_-	-1216.10	-1215.70	-1298.30
CAediting_182901	ENST00000447944.5	chr2_55635493_-	-1217.00	-1215.70	-1298.30
CAediting_182902	ENST00000447944.5	chr2_55635497_-	-1218.20	-1215.70	-1298.30
CAediting_182903	ENST00000447944.5	chr2_55635508_-	-1215.70	-1215.70	-1298.30
CAediting_182904	ENST00000447944.5	chr2_55635510_-	-1219.30	-1215.70	-1298.30
CAediting_182905	ENST00000447944.5	chr2_55635516_-	-1216.00	-1215.70	-1298.30
CAediting_182906	ENST00000447944.5	chr2_55635518_-	-1216.90	-1215.70	-1298.30
CAediting_182907	ENST00000447944.5	chr2_55635531_-	-1215.60	-1215.70	-1298.30
CAediting_182908	ENST00000447944.5	chr2_55635533_-	-1216.80	-1215.70	-1298.30
CAediting_182909	ENST00000447944.5	chr2_55635542_-	-1217.50	-1215.70	-1298.30
CAediting_182910	ENST00000447944.5	chr2_55635553_-	-1218.80	-1215.70	-1298.30
CAediting_182911	ENST00000447944.5	chr2_55635559_-	-1215.80	-1215.70	-1298.30
CAediting_182863	ENST00000415374.4	chr2_55634583_-	-863.50	-863.50	-894.20
CAediting_182864	ENST00000415374.4	chr2_55634585_-	-863.90	-863.50	-894.20
CAediting_182865	ENST00000415374.4	chr2_55634608_-	-865.60	-863.50	-894.20
CAediting_182866	ENST00000415374.4	chr2_55634616_-	-866.30	-863.50	-894.20
CAediting_182867	ENST00000415374.4	chr2_55634623_-	-865.30	-863.50	-894.20
CAediting_182868	ENST00000415374.4	chr2_55634628_-	-866.20	-863.50	-894.20
CAediting_182869	ENST00000415374.4	chr2_55634645_-	-862.60	-863.50	-894.20
CAediting_182870	ENST00000415374.4	chr2_55634652_-	-866.10	-863.50	-894.20
CAediting_182871	ENST00000415374.4	chr2_55634653_-	-863.50	-863.50	-894.20
CAediting_182872	ENST00000415374.4	chr2_55634664_-	-862.60	-863.50	-894.20
CAediting_182873	ENST00000415374.4	chr2_55634667_-	-862.70	-863.50	-894.20
CAediting_182874	ENST00000415374.4	chr2_55634684_-	-866.10	-863.50	-894.20
CAediting_182875	ENST00000415374.4	chr2_55634693_-	-863.40	-863.50	-894.20
CAediting_182876	ENST00000415374.4	chr2_55634694_-	-863.10	-863.50	-894.20
CAediting_182877	ENST00000415374.4	chr2_55634720_-	-863.20	-863.50	-894.20
CAediting_182878	ENST00000415374.4	chr2_55634744_-	-868.20	-863.50	-894.20
CAediting_182879	ENST00000415374.4	chr2_55634780_-	-866.30	-863.50	-894.20
CAediting_182880	ENST00000415374.4	chr2_55634783_-	-862.80	-863.50	-894.20
CAediting_182881	ENST00000415374.4	chr2_55634793_-	-863.50	-863.50	-894.20
CAediting_182882	ENST00000415374.4	chr2_55634807_-	-866.00	-863.50	-894.20
CAediting_182883	ENST00000415374.4	chr2_55634823_-	-863.20	-863.50	-894.20
CAediting_182884	ENST00000415374.4	chr2_55634828_-	-862.90	-863.50	-894.20
CAediting_182885	ENST00000415374.4	chr2_55634835_-	-863.20	-863.50	-894.20
CAediting_182886	ENST00000415374.4	chr2_55634837_-	-868.90	-863.50	-894.20
CAediting_182889	ENST00000260604.7	chr2_55635372_-	-907.00	-907.70	-929.20
CAediting_182890	ENST00000260604.7	chr2_55635382_-	-909.90	-907.70	-929.20
CAediting_182891	ENST00000260604.7	chr2_55635387_-	-910.00	-907.70	-929.20
CAediting_182892	ENST00000260604.7	chr2_55635407_-	-907.70	-907.70	-929.20
CAediting_182893	ENST00000260604.7	chr2_55635412_-	-909.20	-907.70	-929.20
CAediting_182894	ENST00000260604.7	chr2_55635423_-	-910.00	-907.70	-929.20
CAediting_182895	ENST00000260604.7	chr2_55635439_-	-907.10	-907.70	-929.20
CAediting_182896	ENST00000260604.7	chr2_55635443_-	-911.10	-907.70	-929.20
CAediting_182897	ENST00000260604.7	chr2_55635452_-	-911.00	-907.70	-929.20
CAediting_182898	ENST00000260604.7	chr2_55635453_-	-911.00	-907.70	-929.20
CAediting_182899	ENST00000260604.7	chr2_55635479_-	-907.40	-907.70	-929.20
CAediting_182900	ENST00000260604.7	chr2_55635491_-	-907.70	-907.70	-929.20
CAediting_182901	ENST00000260604.7	chr2_55635493_-	-907.70	-907.70	-929.20
CAediting_182902	ENST00000260604.7	chr2_55635497_-	-910.20	-907.70	-929.20
CAediting_182903	ENST00000260604.7	chr2_55635508_-	-907.70	-907.70	-929.20
CAediting_182904	ENST00000260604.7	chr2_55635510_-	-911.30	-907.70	-929.20
CAediting_182905	ENST00000260604.7	chr2_55635516_-	-908.00	-907.70	-929.20
CAediting_182906	ENST00000260604.7	chr2_55635518_-	-908.90	-907.70	-929.20
CAediting_182907	ENST00000260604.7	chr2_55635531_-	-907.80	-907.70	-929.20
CAediting_182908	ENST00000260604.7	chr2_55635533_-	-909.80	-907.70	-929.20
CAediting_182909	ENST00000260604.7	chr2_55635542_-	-909.50	-907.70	-929.20
CAediting_182910	ENST00000260604.7	chr2_55635553_-	-911.10	-907.70	-929.20
CAediting_182911	ENST00000260604.7	chr2_55635559_-	-907.80	-907.70	-929.20
CAediting_182923	ENST00000481066.1	chr2_55645162_-	-326.00	-323.90	-325.30
CAediting_182924	ENST00000481066.1	chr2_55645188_-	-324.40	-323.90	-325.30
CAediting_182925	ENST00000481066.1	chr2_55645253_-	-323.60	-323.90	-325.30

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Relation with ADAR for PNPT1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PNPT1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for PNPT1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PNPT1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PNPT1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
PNPT1	C1824925	DEAFNESS, AUTOSOMAL RECESSIVE 70	4	CTD_human;GENOMICS_ENGLAND;UNIPROT
PNPT1	C3554129	COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 13	4	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
PNPT1	C1384666	hearing impairment	2	GENOMICS_ENGLAND
PNPT1	C0013421	Dystonia	1	GENOMICS_ENGLAND
PNPT1	C0424605	Developmental delay (disorder)	1	GENOMICS_ENGLAND
PNPT1	C0557874	Global developmental delay	1	GENOMICS_ENGLAND
PNPT1	C1846647	DEAFNESS, AUTOSOMAL RECESSIVE (disorder)	1	CLINGEN
PNPT1	C2239176	Liver carcinoma	1	CTD_human
PNPT1	C3714756	Intellectual Disability	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene