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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: RNASET2 (CAeditome ID:8635) |
Gene summary for RNASET2 |
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Gene information | Gene symbol | RNASET2 | Gene ID | 8635 |
Gene name | ribonuclease T2 | |
Synonyms | RNASE6PL|bA514O12.3 | |
Cytomap | 6q27 | |
Type of gene | protein-coding | |
Description | ribonuclease T2ribonuclease 6 | |
Modification date | 20210518 | |
UniProtAcc | O00584 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
RNASET2 | GO:0004540 | Ribonuclease T2 | 22735700 |
RNASET2 | GO:0006401 | Ribonuclease T2 | 22735700 |
RNASET2 | GO:0005615 | Ribonuclease T2 | 16620762 |
RNASET2 | GO:0005764 | Ribonuclease T2 | 16620762 |
RNASET2 | GO:0005788 | Ribonuclease T2 | 16620762 |
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RNA A-to-I events for RNASET2 |
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CAediting_518309(166933474, -), CAediting_518310(166933478, -), CAediting_518311(166933555, -), CAediting_518312(166933615, -), CAediting_518313(166935003, -), CAediting_518314(166935127, -), CAediting_518315(166935129, -), CAediting_518316(166938451, -), CAediting_518317(166938515, -), CAediting_518318(166938732, -), CAediting_518319(166939071, -), CAediting_518320(166939077, -), CAediting_518321(166939089, -), CAediting_518322(166939117, -), CAediting_518323(166939129, -), CAediting_518324(166939131, -), CAediting_518325(166939154, -), CAediting_518326(166939169, -), CAediting_518327(166939185, -), CAediting_518328(166939194, -), CAediting_518329(166939222, -), CAediting_518330(166939234, -), CAediting_518331(166939250, -), CAediting_518332(166939329, -), CAediting_518333(166940259, -), CAediting_518334(166942110, -), CAediting_518335(166942113, -), CAediting_518336(166942118, -), CAediting_518337(166942125, -), CAediting_518338(166942145, -), CAediting_518339(166942150, -), CAediting_518340(166942158, -), CAediting_518341(166942161, -), CAediting_518342(166942164, -), CAediting_518343(166942174, -), CAediting_518344(166942181, -), CAediting_518345(166942190, -), CAediting_518346(166942191, -), CAediting_518347(166942199, -), CAediting_518348(166942206, -), CAediting_518349(166942217, -), CAediting_518350(166942226, -), CAediting_518351(166942231, -), CAediting_518352(166942241, -), CAediting_518353(166942248, -), CAediting_518354(166942266, -), CAediting_518355(166942277, -), CAediting_518356(166942280, -), CAediting_518357(166942290, -), CAediting_518358(166942303, -), CAediting_518359(166942342, -), CAediting_518360(166942523, -), CAediting_518361(166942730, -), CAediting_518362(166942737, -), CAediting_518363(166943852, -), CAediting_518364(166943856, -), CAediting_518365(166943877, -), CAediting_518366(166943879, -), CAediting_518367(166943940, -), CAediting_518368(166943954, -), CAediting_518369(166943957, -), CAediting_518370(166943963, -), CAediting_518371(166943971, -), CAediting_518372(166943972, -), CAediting_518373(166943992, -), CAediting_518374(166943996, -), CAediting_518375(166944020, -), CAediting_518376(166944094, -), CAediting_518377(166944105, -), CAediting_518378(166944118, -), CAediting_518379(166945605, -), CAediting_518380(166948228, -), CAediting_518381(166951047, -), CAediting_518382(166953682, -), CAediting_518383(166954797, -), CAediting_518384(166954835, -), CAediting_518385(166954908, -), CAediting_518386(166954944, -), CAediting_518387(166954987, -), |
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RNA editing positional annotations for RNASET2 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_518309 | chr6_166933474_- | ncRNA_exonic |
CAediting_518310 | chr6_166933478_- | ncRNA_exonic |
CAediting_518311 | chr6_166933555_- | ncRNA_exonic |
CAediting_518312 | chr6_166933615_- | ncRNA_exonic |
CAediting_518313 | chr6_166935003_- | ncRNA_exonic |
CAediting_518314 | chr6_166935127_- | ncRNA_intronic |
CAediting_518315 | chr6_166935129_- | ncRNA_intronic |
CAediting_518316 | chr6_166938451_- | ncRNA_intronic |
CAediting_518317 | chr6_166938515_- | ncRNA_intronic |
CAediting_518318 | chr6_166938732_- | exonic |
CAediting_518319 | chr6_166939071_- | ncRNA_intronic |
CAediting_518320 | chr6_166939077_- | ncRNA_intronic |
CAediting_518321 | chr6_166939089_- | ncRNA_intronic |
CAediting_518322 | chr6_166939117_- | ncRNA_intronic |
CAediting_518323 | chr6_166939129_- | ncRNA_intronic |
CAediting_518324 | chr6_166939131_- | ncRNA_intronic |
CAediting_518325 | chr6_166939154_- | ncRNA_intronic |
CAediting_518326 | chr6_166939169_- | ncRNA_intronic |
CAediting_518327 | chr6_166939185_- | ncRNA_intronic |
CAediting_518328 | chr6_166939194_- | ncRNA_intronic |
CAediting_518329 | chr6_166939222_- | ncRNA_intronic |
CAediting_518330 | chr6_166939234_- | ncRNA_intronic |
CAediting_518331 | chr6_166939250_- | ncRNA_intronic |
CAediting_518332 | chr6_166939329_- | ncRNA_intronic |
CAediting_518333 | chr6_166940259_- | ncRNA_intronic |
CAediting_518334 | chr6_166942110_- | ncRNA_intronic |
CAediting_518335 | chr6_166942113_- | ncRNA_intronic |
CAediting_518336 | chr6_166942118_- | ncRNA_intronic |
CAediting_518337 | chr6_166942125_- | ncRNA_intronic |
CAediting_518338 | chr6_166942145_- | ncRNA_intronic |
CAediting_518339 | chr6_166942150_- | ncRNA_intronic |
CAediting_518340 | chr6_166942158_- | ncRNA_intronic |
CAediting_518341 | chr6_166942161_- | ncRNA_intronic |
CAediting_518342 | chr6_166942164_- | ncRNA_intronic |
CAediting_518343 | chr6_166942174_- | ncRNA_intronic |
CAediting_518344 | chr6_166942181_- | ncRNA_intronic |
CAediting_518345 | chr6_166942190_- | ncRNA_intronic |
CAediting_518346 | chr6_166942191_- | ncRNA_intronic |
CAediting_518347 | chr6_166942199_- | ncRNA_intronic |
CAediting_518348 | chr6_166942206_- | ncRNA_intronic |
CAediting_518349 | chr6_166942217_- | ncRNA_intronic |
CAediting_518350 | chr6_166942226_- | ncRNA_intronic |
CAediting_518351 | chr6_166942231_- | ncRNA_intronic |
CAediting_518352 | chr6_166942241_- | ncRNA_intronic |
CAediting_518353 | chr6_166942248_- | ncRNA_intronic |
CAediting_518354 | chr6_166942266_- | ncRNA_intronic |
CAediting_518355 | chr6_166942277_- | ncRNA_intronic |
CAediting_518356 | chr6_166942280_- | ncRNA_intronic |
CAediting_518357 | chr6_166942290_- | ncRNA_intronic |
CAediting_518358 | chr6_166942303_- | ncRNA_intronic |
CAediting_518359 | chr6_166942342_- | ncRNA_intronic |
CAediting_518360 | chr6_166942523_- | ncRNA_intronic |
CAediting_518361 | chr6_166942730_- | ncRNA_intronic |
CAediting_518362 | chr6_166942737_- | ncRNA_intronic |
CAediting_518363 | chr6_166943852_- | ncRNA_intronic |
CAediting_518364 | chr6_166943856_- | ncRNA_intronic |
CAediting_518365 | chr6_166943877_- | ncRNA_intronic |
CAediting_518366 | chr6_166943879_- | ncRNA_intronic |
CAediting_518367 | chr6_166943940_- | ncRNA_intronic |
CAediting_518368 | chr6_166943954_- | ncRNA_intronic |
CAediting_518369 | chr6_166943957_- | ncRNA_intronic |
CAediting_518370 | chr6_166943963_- | ncRNA_intronic |
CAediting_518371 | chr6_166943971_- | ncRNA_intronic |
CAediting_518372 | chr6_166943972_- | ncRNA_intronic |
CAediting_518373 | chr6_166943992_- | ncRNA_intronic |
CAediting_518374 | chr6_166943996_- | ncRNA_exonic |
CAediting_518375 | chr6_166944020_- | ncRNA_exonic |
CAediting_518376 | chr6_166944094_- | ncRNA_intronic |
CAediting_518377 | chr6_166944105_- | ncRNA_intronic |
CAediting_518378 | chr6_166944118_- | ncRNA_intronic |
CAediting_518379 | chr6_166945605_- | ncRNA_intronic |
CAediting_518380 | chr6_166948228_- | ncRNA_intronic |
CAediting_518381 | chr6_166951047_- | ncRNA_intronic |
CAediting_518382 | chr6_166953682_- | ncRNA_intronic |
CAediting_518383 | chr6_166954797_- | ncRNA_intronic |
CAediting_518384 | chr6_166954835_- | ncRNA_intronic |
CAediting_518385 | chr6_166954908_- | ncRNA_intronic |
CAediting_518386 | chr6_166954944_- | ncRNA_intronic |
CAediting_518387 | chr6_166954987_- | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_518309 | chr6_166933474_- | SINE | Alu | AluJr |
CAediting_518310 | chr6_166933478_- | SINE | Alu | AluJr |
CAediting_518311 | chr6_166933555_- | SINE | Alu | AluJr |
CAediting_518312 | chr6_166933615_- | SINE | Alu | AluJr |
CAediting_518319 | chr6_166939071_- | SINE | Alu | AluSq2 |
CAediting_518320 | chr6_166939077_- | SINE | Alu | AluSq2 |
CAediting_518321 | chr6_166939089_- | SINE | Alu | AluSq2 |
CAediting_518322 | chr6_166939117_- | SINE | Alu | AluSq2 |
CAediting_518323 | chr6_166939129_- | SINE | Alu | AluSq2 |
CAediting_518324 | chr6_166939131_- | SINE | Alu | AluSq2 |
CAediting_518325 | chr6_166939154_- | SINE | Alu | AluSq2 |
CAediting_518326 | chr6_166939169_- | SINE | Alu | AluSq2 |
CAediting_518327 | chr6_166939185_- | SINE | Alu | AluSq2 |
CAediting_518328 | chr6_166939194_- | SINE | Alu | AluSq2 |
CAediting_518329 | chr6_166939222_- | SINE | Alu | AluSq2 |
CAediting_518330 | chr6_166939234_- | SINE | Alu | AluSq2 |
CAediting_518331 | chr6_166939250_- | SINE | Alu | AluSq2 |
CAediting_518332 | chr6_166939329_- | SINE | Alu | AluSq2 |
CAediting_518334 | chr6_166942110_- | SINE | Alu | AluSz |
CAediting_518335 | chr6_166942113_- | SINE | Alu | AluSz |
CAediting_518336 | chr6_166942118_- | SINE | Alu | AluSz |
CAediting_518337 | chr6_166942125_- | SINE | Alu | AluSz |
CAediting_518338 | chr6_166942145_- | SINE | Alu | AluSz |
CAediting_518339 | chr6_166942150_- | SINE | Alu | AluSz |
CAediting_518340 | chr6_166942158_- | SINE | Alu | AluSz |
CAediting_518341 | chr6_166942161_- | SINE | Alu | AluSz |
CAediting_518342 | chr6_166942164_- | SINE | Alu | AluSz |
CAediting_518343 | chr6_166942174_- | SINE | Alu | AluSz |
CAediting_518344 | chr6_166942181_- | SINE | Alu | AluSz |
CAediting_518345 | chr6_166942190_- | SINE | Alu | AluSz |
CAediting_518346 | chr6_166942191_- | SINE | Alu | AluSz |
CAediting_518347 | chr6_166942199_- | SINE | Alu | AluSz |
CAediting_518348 | chr6_166942206_- | SINE | Alu | AluSz |
CAediting_518349 | chr6_166942217_- | SINE | Alu | AluSz |
CAediting_518350 | chr6_166942226_- | SINE | Alu | AluSz |
CAediting_518351 | chr6_166942231_- | SINE | Alu | AluSz |
CAediting_518352 | chr6_166942241_- | SINE | Alu | AluSz |
CAediting_518353 | chr6_166942248_- | SINE | Alu | AluSz |
CAediting_518354 | chr6_166942266_- | SINE | Alu | AluSz |
CAediting_518355 | chr6_166942277_- | SINE | Alu | AluSz |
CAediting_518356 | chr6_166942280_- | SINE | Alu | AluSz |
CAediting_518357 | chr6_166942290_- | SINE | Alu | AluSz |
CAediting_518358 | chr6_166942303_- | SINE | Alu | AluSz |
CAediting_518359 | chr6_166942342_- | SINE | Alu | AluSz |
CAediting_518360 | chr6_166942523_- | SINE | Alu | AluJo |
CAediting_518361 | chr6_166942730_- | SINE | Alu | AluJo |
CAediting_518362 | chr6_166942737_- | SINE | Alu | AluJo |
CAediting_518363 | chr6_166943852_- | SINE | Alu | AluSc5 |
CAediting_518364 | chr6_166943856_- | SINE | Alu | AluSc5 |
CAediting_518365 | chr6_166943877_- | SINE | Alu | AluSc5 |
CAediting_518366 | chr6_166943879_- | SINE | Alu | AluSc5 |
CAediting_518367 | chr6_166943940_- | SINE | Alu | AluSc5 |
CAediting_518368 | chr6_166943954_- | SINE | Alu | AluSc5 |
CAediting_518369 | chr6_166943957_- | SINE | Alu | AluSc5 |
CAediting_518370 | chr6_166943963_- | SINE | Alu | AluSc5 |
CAediting_518371 | chr6_166943971_- | SINE | Alu | AluSc5 |
CAediting_518372 | chr6_166943972_- | SINE | Alu | AluSc5 |
CAediting_518373 | chr6_166943992_- | SINE | Alu | AluSc5 |
CAediting_518374 | chr6_166943996_- | SINE | Alu | AluSc5 |
CAediting_518375 | chr6_166944020_- | SINE | Alu | AluSc5 |
CAediting_518376 | chr6_166944094_- | SINE | Alu | AluSc5 |
CAediting_518377 | chr6_166944105_- | SINE | Alu | AluSc5 |
CAediting_518378 | chr6_166944118_- | SINE | Alu | AluSc5 |
CAediting_518379 | chr6_166945605_- | SINE | Alu | AluSp |
CAediting_518380 | chr6_166948228_- | SINE | Alu | AluSx |
CAediting_518381 | chr6_166951047_- | LTR | ERVK | LTR13 |
CAediting_518382 | chr6_166953682_- | SINE | Alu | AluJb |
CAediting_518383 | chr6_166954797_- | SINE | Alu | AluSx |
CAediting_518384 | chr6_166954835_- | SINE | Alu | AluSx |
CAediting_518385 | chr6_166954908_- | SINE | Alu | AluSx |
CAediting_518386 | chr6_166954944_- | SINE | Alu | AluSx |
CAediting_518387 | chr6_166954987_- | SINE | Alu | AluSx |
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RNA A-to-I editing events in the alternative splicing sites for RNASET2 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RNASET2 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for RNASET2 |
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The effects of the RNA editing to the miRNA binding sites for RNASET2 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_524911 | chr7_5495852_- | ENSG00000026297.14 | ENST00000421787 | hsa-miR-589-3p | 166943596 | 166943602 | 7mer-m8 | 166943595 | 166943617 | 145 | -16.46 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229415 | chr17_67471547_+ | ENSG00000026297.14 | ENST00000421787 | hsa-miR-548aa | 166943367 | 166943373 | 7mer-m8 | 166943366 | 166943389 | 144 | -8.42 |
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The effects of the RNA editing to the stability of the RNA structures for RNASET2 |
![]() * Click on the image to enlarge it in a new window. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_518309 | ENST00000358165.6 | chr6_166933474_- | -906.10 | -905.10 | -909.60 |
CAediting_518310 | ENST00000358165.6 | chr6_166933478_- | -905.90 | -905.10 | -909.60 |
CAediting_518311 | ENST00000358165.6 | chr6_166933555_- | -905.10 | -905.10 | -909.60 |
CAediting_518312 | ENST00000358165.6 | chr6_166933615_- | -905.10 | -905.10 | -909.60 |
CAediting_518313 | ENST00000358165.6 | chr6_166935003_- | -905.10 | -905.10 | -909.60 |
CAediting_518318 | ENST00000358165.6 | chr6_166938732_- | -907.80 | -905.10 | -909.60 |
CAediting_518374 | ENST00000467705.5 | chr6_166943996_- | -169.70 | -168.00 | -169.00 |
CAediting_518375 | ENST00000467705.5 | chr6_166944020_- | -167.50 | -168.00 | -169.00 |
CAediting_518309 | ENST00000496851.5 | chr6_166933474_- | -286.40 | -285.40 | -287.70 |
CAediting_518310 | ENST00000496851.5 | chr6_166933478_- | -286.20 | -285.40 | -287.70 |
CAediting_518311 | ENST00000496851.5 | chr6_166933555_- | -285.40 | -285.40 | -287.70 |
CAediting_518312 | ENST00000496851.5 | chr6_166933615_- | -285.90 | -285.40 | -287.70 |
CAediting_518309 | ENST00000499370.5 | chr6_166933474_- | -690.60 | -689.60 | -690.90 |
CAediting_518310 | ENST00000499370.5 | chr6_166933478_- | -690.40 | -689.60 | -690.90 |
CAediting_518311 | ENST00000499370.5 | chr6_166933555_- | -689.60 | -689.60 | -690.90 |
CAediting_518312 | ENST00000499370.5 | chr6_166933615_- | -689.10 | -689.60 | -690.90 |
CAediting_518318 | ENST00000611959.1 | chr6_166938732_- | -493.90 | -491.00 | -493.90 |
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Relation with ADAR for RNASET2 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for RNASET2 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for RNASET2 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for RNASET2 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RNASET2 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
RNASET2 | C2751843 | Leukoencephalopathy, Cystic, Without Megalencephaly | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
RNASET2 | C0006111 | Brain Diseases | 1 | CTD_human |
RNASET2 | C0018213 | Graves Disease | 1 | CTD_human |
RNASET2 | C0024121 | Lung Neoplasms | 1 | CTD_human |
RNASET2 | C0085584 | Encephalopathies | 1 | CTD_human |
RNASET2 | C0242379 | Malignant neoplasm of lung | 1 | CTD_human |
RNASET2 | C3714756 | Intellectual Disability | 1 | GENOMICS_ENGLAND |