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Editing gene: DENR (CAeditome ID:8562)

Gene summary for DENR

Gene summary

Gene information	Gene symbol	DENR
	Gene ID	8562
	Gene name	density regulated re-initiation and release factor
	Synonyms	DRP\|DRP1\|SMAP-3
	Cytomap	12q24.31
	Type of gene	protein-coding
	Description	density-regulated proteinsmooth muscle cell associated protein-3
	Modification date	20210518
	UniProtAcc	O43583
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
DENR	GO:0001731	Density-regulated protein	20713520
DENR	GO:0032790	Density-regulated protein	20713520
DENR	GO:0075522	Density-regulated protein	20713520

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RNA A-to-I events for DENR

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000139726.9

RNA A-to-I editing events in Cancer.

CAediting_943130(122756171, +), CAediting_943131(122756187, +), CAediting_943132(122756312, +), CAediting_943133(122756355, +), CAediting_943134(122756368, +), CAediting_943135(122756370, +), CAediting_943136(122756398, +), CAediting_943137(122756433, +), CAediting_943138(122756459, +), CAediting_943139(122756469, +), CAediting_943140(122758094, +), CAediting_943141(122758097, +), CAediting_943142(122758103, +), CAediting_943143(122758128, +), CAediting_943144(122758152, +), CAediting_943145(122758164, +), CAediting_943146(122758171, +), CAediting_943147(122758172, +), CAediting_943148(122758201, +), CAediting_943149(122758206, +), CAediting_943150(122758211, +), CAediting_943151(122758213, +), CAediting_943152(122758252, +), CAediting_943153(122758309, +), CAediting_943154(122758331, +), CAediting_943155(122758344, +), CAediting_943156(122758527, +), CAediting_943157(122758541, +), CAediting_943158(122758543, +), CAediting_943159(122758549, +), CAediting_943160(122758550, +), CAediting_943161(122758555, +), CAediting_943162(122758556, +), CAediting_943163(122758558, +), CAediting_943164(122758576, +), CAediting_943165(122758580, +), CAediting_943166(122758623, +), CAediting_943167(122758642, +), CAediting_943168(122758645, +), CAediting_943169(122758647, +), CAediting_943170(122758656, +), CAediting_943171(122758659, +), CAediting_943172(122758663, +), CAediting_943173(122758676, +), CAediting_943174(122758685, +), CAediting_943175(122758695, +), CAediting_943176(122758708, +), CAediting_943177(122758714, +), CAediting_943178(122758720, +), CAediting_943179(122758724, +), CAediting_943180(122758725, +), CAediting_943181(122758730, +), CAediting_943182(122758753, +), CAediting_943183(122758754, +), CAediting_943184(122758787, +), CAediting_943185(122758902, +), CAediting_943186(122758914, +), CAediting_943187(122758924, +), CAediting_943188(122758938, +), CAediting_943189(122759054, +), CAediting_943190(122759088, +), CAediting_943191(122759105, +), CAediting_943192(122759106, +), CAediting_943193(122759451, +), CAediting_943194(122759453, +), CAediting_943195(122759459, +), CAediting_943196(122759460, +), CAediting_943197(122759506, +), CAediting_943198(122759520, +), CAediting_943199(122759535, +), CAediting_943200(122759542, +), CAediting_943201(122759545, +), CAediting_943202(122759556, +), CAediting_943203(122759563, +), CAediting_943204(122759568, +), CAediting_943205(122759570, +), CAediting_943206(122759571, +), CAediting_943207(122759574, +), CAediting_943208(122759600, +), CAediting_943209(122759601, +), CAediting_943210(122759606, +), CAediting_943211(122759610, +), CAediting_943212(122759633, +), CAediting_943213(122759671, +), CAediting_943214(122759710, +), CAediting_943215(122760569, +), CAediting_943216(122760570, +), CAediting_943217(122760584, +), CAediting_943218(122760651, +), CAediting_943219(122760652, +), CAediting_943220(122760713, +), CAediting_943221(122760955, +), CAediting_943222(122761028, +), CAediting_943223(122761033, +), CAediting_943224(122761054, +), CAediting_943225(122761070, +), CAediting_943226(122761103, +), CAediting_943227(122761156, +), CAediting_943228(122761157, +), CAediting_943229(122761162, +), CAediting_943230(122761247, +), CAediting_943231(122761256, +), CAediting_943232(122761281, +), CAediting_943233(122761291, +), CAediting_943234(122761297, +), CAediting_943235(122761301, +), CAediting_943236(122761337, +), CAediting_943237(122761347, +), CAediting_943238(122761362, +), CAediting_943239(122761399, +), CAediting_943240(122761595, +), CAediting_943241(122761613, +), CAediting_943242(122761662, +), CAediting_943243(122761665, +), CAediting_943244(122761795, +), CAediting_943245(122761820, +), CAediting_943246(122763144, +), CAediting_943247(122763173, +), CAediting_943248(122763224, +), CAediting_943249(122763268, +), CAediting_943250(122763284, +), CAediting_943251(122763292, +), CAediting_943252(122763310, +), CAediting_943253(122763327, +), CAediting_943254(122763331, +), CAediting_943255(122763434, +), CAediting_943256(122763450, +), CAediting_943257(122763603, +), CAediting_943258(122764557, +), CAediting_943259(122764579, +), CAediting_943260(122768207, +), CAediting_943261(122768209, +), CAediting_943262(122769110, +), CAediting_943263(122769130, +), CAediting_943264(122769131, +), CAediting_943265(122769132, +), CAediting_943266(122769150, +), CAediting_943267(122769152, +), CAediting_943268(122769154, +), CAediting_943269(122769156, +), CAediting_943270(122769160, +), CAediting_943271(122769166, +), CAediting_943272(122769170, +), CAediting_943273(122769172, +), CAediting_943274(122769174, +), CAediting_943275(122769176, +), CAediting_943276(122769182, +), CAediting_943277(122769186, +), CAediting_943278(122769190, +), CAediting_943279(122769198, +), CAediting_943280(122769202, +), CAediting_943281(122769204, +), CAediting_943282(122769206, +), CAediting_943283(122769210, +), CAediting_943284(122769220, +), CAediting_943285(122769224, +), CAediting_943286(122769226, +), CAediting_943287(122769228, +), CAediting_943288(122769240, +), CAediting_943289(122769248, +), CAediting_943290(122769252, +), CAediting_943291(122769256, +), CAediting_943292(122769260, +), CAediting_943293(122769262, +), CAediting_943294(122769264, +), CAediting_943295(122769266, +), CAediting_943296(122769268, +), CAediting_943297(122769270, +), CAediting_943298(122769274, +), CAediting_943299(122769276, +), CAediting_943300(122769288, +), CAediting_943301(122769290, +), CAediting_943302(122769296, +), CAediting_943303(122769298, +), CAediting_943304(122769300, +), CAediting_943305(122769302, +), CAediting_943306(122769306, +), CAediting_943307(122769308, +), CAediting_943308(122769310, +), CAediting_943309(122769312, +), CAediting_943310(122769318, +), CAediting_943311(122769530, +), CAediting_943312(122769558, +), CAediting_943313(122769624, +), CAediting_943314(122769636, +), CAediting_943315(122769646, +), CAediting_943316(122769757, +), CAediting_943317(122769766, +), CAediting_943318(122769767, +), CAediting_943319(122769779, +), CAediting_943320(122769801, +),

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RNA editing positional annotations for DENR using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_943130	chr12_122756171_+	ncRNA_intronic
CAediting_943131	chr12_122756187_+	ncRNA_intronic
CAediting_943132	chr12_122756312_+	ncRNA_intronic
CAediting_943133	chr12_122756355_+	ncRNA_intronic
CAediting_943134	chr12_122756368_+	ncRNA_intronic
CAediting_943135	chr12_122756370_+	ncRNA_intronic
CAediting_943136	chr12_122756398_+	ncRNA_intronic
CAediting_943137	chr12_122756433_+	ncRNA_intronic
CAediting_943138	chr12_122756459_+	ncRNA_intronic
CAediting_943139	chr12_122756469_+	ncRNA_intronic
CAediting_943140	chr12_122758094_+	ncRNA_intronic
CAediting_943141	chr12_122758097_+	ncRNA_intronic
CAediting_943142	chr12_122758103_+	ncRNA_intronic
CAediting_943143	chr12_122758128_+	ncRNA_intronic
CAediting_943144	chr12_122758152_+	ncRNA_intronic
CAediting_943145	chr12_122758164_+	ncRNA_intronic
CAediting_943146	chr12_122758171_+	ncRNA_intronic
CAediting_943147	chr12_122758172_+	ncRNA_intronic
CAediting_943148	chr12_122758201_+	ncRNA_intronic
CAediting_943149	chr12_122758206_+	ncRNA_intronic
CAediting_943150	chr12_122758211_+	ncRNA_intronic
CAediting_943151	chr12_122758213_+	ncRNA_intronic
CAediting_943152	chr12_122758252_+	ncRNA_intronic
CAediting_943153	chr12_122758309_+	ncRNA_intronic
CAediting_943154	chr12_122758331_+	ncRNA_intronic
CAediting_943155	chr12_122758344_+	ncRNA_intronic
CAediting_943156	chr12_122758527_+	ncRNA_intronic
CAediting_943157	chr12_122758541_+	ncRNA_intronic
CAediting_943158	chr12_122758543_+	ncRNA_intronic
CAediting_943159	chr12_122758549_+	ncRNA_intronic
CAediting_943160	chr12_122758550_+	ncRNA_intronic
CAediting_943161	chr12_122758555_+	ncRNA_intronic
CAediting_943162	chr12_122758556_+	ncRNA_intronic
CAediting_943163	chr12_122758558_+	ncRNA_intronic
CAediting_943164	chr12_122758576_+	ncRNA_intronic
CAediting_943165	chr12_122758580_+	ncRNA_intronic
CAediting_943166	chr12_122758623_+	ncRNA_intronic
CAediting_943167	chr12_122758642_+	ncRNA_intronic
CAediting_943168	chr12_122758645_+	ncRNA_intronic
CAediting_943169	chr12_122758647_+	ncRNA_intronic
CAediting_943170	chr12_122758656_+	ncRNA_intronic
CAediting_943171	chr12_122758659_+	ncRNA_intronic
CAediting_943172	chr12_122758663_+	ncRNA_intronic
CAediting_943173	chr12_122758676_+	ncRNA_intronic
CAediting_943174	chr12_122758685_+	ncRNA_intronic
CAediting_943175	chr12_122758695_+	ncRNA_intronic
CAediting_943176	chr12_122758708_+	ncRNA_intronic
CAediting_943177	chr12_122758714_+	ncRNA_intronic
CAediting_943178	chr12_122758720_+	ncRNA_intronic
CAediting_943179	chr12_122758724_+	ncRNA_intronic
CAediting_943180	chr12_122758725_+	ncRNA_intronic
CAediting_943181	chr12_122758730_+	ncRNA_intronic
CAediting_943182	chr12_122758753_+	ncRNA_intronic
CAediting_943183	chr12_122758754_+	ncRNA_intronic
CAediting_943184	chr12_122758787_+	ncRNA_intronic
CAediting_943185	chr12_122758902_+	ncRNA_intronic
CAediting_943186	chr12_122758914_+	ncRNA_intronic
CAediting_943187	chr12_122758924_+	ncRNA_intronic
CAediting_943188	chr12_122758938_+	ncRNA_intronic
CAediting_943189	chr12_122759054_+	ncRNA_intronic
CAediting_943190	chr12_122759088_+	ncRNA_intronic
CAediting_943191	chr12_122759105_+	ncRNA_intronic
CAediting_943192	chr12_122759106_+	ncRNA_intronic
CAediting_943193	chr12_122759451_+	ncRNA_intronic
CAediting_943194	chr12_122759453_+	ncRNA_intronic
CAediting_943195	chr12_122759459_+	ncRNA_intronic
CAediting_943196	chr12_122759460_+	ncRNA_intronic
CAediting_943197	chr12_122759506_+	ncRNA_intronic
CAediting_943198	chr12_122759520_+	ncRNA_intronic
CAediting_943199	chr12_122759535_+	ncRNA_intronic
CAediting_943200	chr12_122759542_+	ncRNA_intronic
CAediting_943201	chr12_122759545_+	ncRNA_intronic
CAediting_943202	chr12_122759556_+	ncRNA_intronic
CAediting_943203	chr12_122759563_+	ncRNA_intronic
CAediting_943204	chr12_122759568_+	ncRNA_intronic
CAediting_943205	chr12_122759570_+	ncRNA_intronic
CAediting_943206	chr12_122759571_+	ncRNA_intronic
CAediting_943207	chr12_122759574_+	ncRNA_intronic
CAediting_943208	chr12_122759600_+	ncRNA_intronic
CAediting_943209	chr12_122759601_+	ncRNA_intronic
CAediting_943210	chr12_122759606_+	ncRNA_intronic
CAediting_943211	chr12_122759610_+	ncRNA_intronic
CAediting_943212	chr12_122759633_+	ncRNA_intronic
CAediting_943213	chr12_122759671_+	ncRNA_intronic
CAediting_943214	chr12_122759710_+	ncRNA_intronic
CAediting_943215	chr12_122760569_+	ncRNA_intronic
CAediting_943216	chr12_122760570_+	ncRNA_intronic
CAediting_943217	chr12_122760584_+	ncRNA_intronic
CAediting_943218	chr12_122760651_+	ncRNA_intronic
CAediting_943219	chr12_122760652_+	ncRNA_intronic
CAediting_943220	chr12_122760713_+	ncRNA_intronic
CAediting_943221	chr12_122760955_+	ncRNA_intronic
CAediting_943222	chr12_122761028_+	ncRNA_intronic
CAediting_943223	chr12_122761033_+	ncRNA_intronic
CAediting_943224	chr12_122761054_+	ncRNA_intronic
CAediting_943225	chr12_122761070_+	ncRNA_intronic
CAediting_943226	chr12_122761103_+	ncRNA_intronic
CAediting_943227	chr12_122761156_+	ncRNA_intronic
CAediting_943228	chr12_122761157_+	ncRNA_intronic
CAediting_943229	chr12_122761162_+	ncRNA_intronic
CAediting_943230	chr12_122761247_+	ncRNA_intronic
CAediting_943231	chr12_122761256_+	ncRNA_intronic
CAediting_943232	chr12_122761281_+	ncRNA_intronic
CAediting_943233	chr12_122761291_+	ncRNA_intronic
CAediting_943234	chr12_122761297_+	ncRNA_intronic
CAediting_943235	chr12_122761301_+	ncRNA_intronic
CAediting_943236	chr12_122761337_+	ncRNA_intronic
CAediting_943237	chr12_122761347_+	ncRNA_intronic
CAediting_943238	chr12_122761362_+	ncRNA_intronic
CAediting_943239	chr12_122761399_+	ncRNA_intronic
CAediting_943240	chr12_122761595_+	ncRNA_intronic
CAediting_943241	chr12_122761613_+	ncRNA_intronic
CAediting_943242	chr12_122761662_+	ncRNA_intronic
CAediting_943243	chr12_122761665_+	ncRNA_intronic
CAediting_943244	chr12_122761795_+	ncRNA_intronic
CAediting_943245	chr12_122761820_+	ncRNA_intronic
CAediting_943246	chr12_122763144_+	ncRNA_exonic
CAediting_943247	chr12_122763173_+	ncRNA_exonic
CAediting_943248	chr12_122763224_+	ncRNA_exonic
CAediting_943249	chr12_122763268_+	intronic
CAediting_943250	chr12_122763284_+	intronic
CAediting_943251	chr12_122763292_+	intronic
CAediting_943252	chr12_122763310_+	intronic
CAediting_943253	chr12_122763327_+	intronic
CAediting_943254	chr12_122763331_+	intronic
CAediting_943255	chr12_122763434_+	intronic
CAediting_943256	chr12_122763450_+	intronic
CAediting_943257	chr12_122763603_+	intronic
CAediting_943258	chr12_122764557_+	intronic
CAediting_943259	chr12_122764579_+	intronic
CAediting_943260	chr12_122768207_+	intronic
CAediting_943261	chr12_122768209_+	intronic
CAediting_943262	chr12_122769110_+	UTR3
CAediting_943263	chr12_122769130_+	UTR3
CAediting_943264	chr12_122769131_+	UTR3
CAediting_943265	chr12_122769132_+	UTR3
CAediting_943266	chr12_122769150_+	UTR3
CAediting_943267	chr12_122769152_+	UTR3
CAediting_943268	chr12_122769154_+	UTR3
CAediting_943269	chr12_122769156_+	UTR3
CAediting_943270	chr12_122769160_+	UTR3
CAediting_943271	chr12_122769166_+	UTR3
CAediting_943272	chr12_122769170_+	UTR3
CAediting_943273	chr12_122769172_+	UTR3
CAediting_943274	chr12_122769174_+	UTR3
CAediting_943275	chr12_122769176_+	UTR3
CAediting_943276	chr12_122769182_+	UTR3
CAediting_943277	chr12_122769186_+	UTR3
CAediting_943278	chr12_122769190_+	UTR3
CAediting_943279	chr12_122769198_+	UTR3
CAediting_943280	chr12_122769202_+	UTR3
CAediting_943281	chr12_122769204_+	UTR3
CAediting_943282	chr12_122769206_+	UTR3
CAediting_943283	chr12_122769210_+	UTR3
CAediting_943284	chr12_122769220_+	UTR3
CAediting_943285	chr12_122769224_+	UTR3
CAediting_943286	chr12_122769226_+	UTR3
CAediting_943287	chr12_122769228_+	UTR3
CAediting_943288	chr12_122769240_+	UTR3
CAediting_943289	chr12_122769248_+	UTR3
CAediting_943290	chr12_122769252_+	UTR3
CAediting_943291	chr12_122769256_+	UTR3
CAediting_943292	chr12_122769260_+	UTR3
CAediting_943293	chr12_122769262_+	UTR3
CAediting_943294	chr12_122769264_+	UTR3
CAediting_943295	chr12_122769266_+	UTR3
CAediting_943296	chr12_122769268_+	UTR3
CAediting_943297	chr12_122769270_+	UTR3
CAediting_943298	chr12_122769274_+	UTR3
CAediting_943299	chr12_122769276_+	UTR3
CAediting_943300	chr12_122769288_+	UTR3
CAediting_943301	chr12_122769290_+	UTR3
CAediting_943302	chr12_122769296_+	UTR3
CAediting_943303	chr12_122769298_+	UTR3
CAediting_943304	chr12_122769300_+	UTR3
CAediting_943305	chr12_122769302_+	UTR3
CAediting_943306	chr12_122769306_+	UTR3
CAediting_943307	chr12_122769308_+	UTR3
CAediting_943308	chr12_122769310_+	UTR3
CAediting_943309	chr12_122769312_+	UTR3
CAediting_943310	chr12_122769318_+	UTR3
CAediting_943311	chr12_122769530_+	UTR3
CAediting_943312	chr12_122769558_+	UTR3
CAediting_943313	chr12_122769624_+	splicing
CAediting_943314	chr12_122769636_+	exonic
CAediting_943315	chr12_122769646_+	UTR3
CAediting_943316	chr12_122769757_+	UTR3
CAediting_943317	chr12_122769766_+	UTR3
CAediting_943318	chr12_122769767_+	UTR3
CAediting_943319	chr12_122769779_+	UTR3
CAediting_943320	chr12_122769801_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_943130	chr12_122756171_+	SINE	Alu	AluSq
CAediting_943131	chr12_122756187_+	SINE	Alu	AluSq
CAediting_943132	chr12_122756312_+	SINE	Alu	AluSq
CAediting_943133	chr12_122756355_+	SINE	Alu	AluSq
CAediting_943134	chr12_122756368_+	SINE	Alu	AluSq
CAediting_943135	chr12_122756370_+	SINE	Alu	AluSq
CAediting_943136	chr12_122756398_+	SINE	Alu	AluSq
CAediting_943137	chr12_122756433_+	SINE	Alu	AluSq
CAediting_943138	chr12_122756459_+	SINE	Alu	AluSq
CAediting_943139	chr12_122756469_+	SINE	Alu	AluSq
CAediting_943140	chr12_122758094_+	SINE	Alu	AluSg4
CAediting_943141	chr12_122758097_+	SINE	Alu	AluSg4
CAediting_943142	chr12_122758103_+	SINE	Alu	AluSg4
CAediting_943143	chr12_122758128_+	SINE	Alu	AluSg4
CAediting_943144	chr12_122758152_+	SINE	Alu	AluSg4
CAediting_943145	chr12_122758164_+	SINE	Alu	AluSg4
CAediting_943146	chr12_122758171_+	SINE	Alu	AluSg4
CAediting_943147	chr12_122758172_+	SINE	Alu	AluSg4
CAediting_943148	chr12_122758201_+	SINE	Alu	AluSg4
CAediting_943149	chr12_122758206_+	SINE	Alu	AluSg4
CAediting_943150	chr12_122758211_+	SINE	Alu	AluSg4
CAediting_943151	chr12_122758213_+	SINE	Alu	AluSg4
CAediting_943152	chr12_122758252_+	SINE	Alu	AluSg4
CAediting_943153	chr12_122758309_+	SINE	Alu	AluSg4
CAediting_943154	chr12_122758331_+	SINE	Alu	AluSg4
CAediting_943155	chr12_122758344_+	SINE	Alu	AluSg4
CAediting_943156	chr12_122758527_+	SINE	Alu	AluJo
CAediting_943157	chr12_122758541_+	SINE	Alu	AluJo
CAediting_943158	chr12_122758543_+	SINE	Alu	AluJo
CAediting_943159	chr12_122758549_+	SINE	Alu	AluJo
CAediting_943160	chr12_122758550_+	SINE	Alu	AluJo
CAediting_943161	chr12_122758555_+	SINE	Alu	AluJo
CAediting_943162	chr12_122758556_+	SINE	Alu	AluJo
CAediting_943163	chr12_122758558_+	SINE	Alu	AluJo
CAediting_943164	chr12_122758576_+	SINE	Alu	AluJo
CAediting_943165	chr12_122758580_+	SINE	Alu	AluJo
CAediting_943166	chr12_122758623_+	SINE	Alu	AluJo
CAediting_943167	chr12_122758642_+	SINE	Alu	AluJo
CAediting_943168	chr12_122758645_+	SINE	Alu	AluJo
CAediting_943169	chr12_122758647_+	SINE	Alu	AluJo
CAediting_943170	chr12_122758656_+	SINE	Alu	AluJo
CAediting_943171	chr12_122758659_+	SINE	Alu	AluJo
CAediting_943172	chr12_122758663_+	SINE	Alu	AluJo
CAediting_943173	chr12_122758676_+	SINE	Alu	AluJo
CAediting_943174	chr12_122758685_+	SINE	Alu	AluJo
CAediting_943175	chr12_122758695_+	SINE	Alu	AluJo
CAediting_943176	chr12_122758708_+	SINE	Alu	AluJo
CAediting_943177	chr12_122758714_+	SINE	Alu	AluJo
CAediting_943178	chr12_122758720_+	SINE	Alu	AluJo
CAediting_943179	chr12_122758724_+	SINE	Alu	AluJo
CAediting_943180	chr12_122758725_+	SINE	Alu	AluJo
CAediting_943181	chr12_122758730_+	SINE	Alu	AluJo
CAediting_943182	chr12_122758753_+	SINE	Alu	AluJo
CAediting_943183	chr12_122758754_+	SINE	Alu	AluJo
CAediting_943184	chr12_122758787_+	SINE	Alu	AluJo
CAediting_943185	chr12_122758902_+	SINE	Alu	AluSx
CAediting_943186	chr12_122758914_+	SINE	Alu	AluSx
CAediting_943187	chr12_122758924_+	SINE	Alu	AluSx
CAediting_943188	chr12_122758938_+	SINE	Alu	AluSx
CAediting_943189	chr12_122759054_+	SINE	Alu	AluSx
CAediting_943190	chr12_122759088_+	SINE	Alu	AluSx
CAediting_943191	chr12_122759105_+	SINE	Alu	AluSx
CAediting_943192	chr12_122759106_+	SINE	Alu	AluSx
CAediting_943193	chr12_122759451_+	SINE	Alu	AluSz6
CAediting_943194	chr12_122759453_+	SINE	Alu	AluSz6
CAediting_943195	chr12_122759459_+	SINE	Alu	AluSz6
CAediting_943196	chr12_122759460_+	SINE	Alu	AluSz6
CAediting_943197	chr12_122759506_+	SINE	Alu	AluSz6
CAediting_943198	chr12_122759520_+	SINE	Alu	AluSz6
CAediting_943199	chr12_122759535_+	SINE	Alu	AluSz6
CAediting_943200	chr12_122759542_+	SINE	Alu	AluSz6
CAediting_943201	chr12_122759545_+	SINE	Alu	AluSz6
CAediting_943202	chr12_122759556_+	SINE	Alu	AluSz6
CAediting_943203	chr12_122759563_+	SINE	Alu	AluSz6
CAediting_943204	chr12_122759568_+	SINE	Alu	AluSz6
CAediting_943205	chr12_122759570_+	SINE	Alu	AluSz6
CAediting_943206	chr12_122759571_+	SINE	Alu	AluSz6
CAediting_943207	chr12_122759574_+	SINE	Alu	AluSz6
CAediting_943208	chr12_122759600_+	SINE	Alu	AluSz6
CAediting_943209	chr12_122759601_+	SINE	Alu	AluSz6
CAediting_943210	chr12_122759606_+	SINE	Alu	AluSz6
CAediting_943211	chr12_122759610_+	SINE	Alu	AluSz6
CAediting_943212	chr12_122759633_+	SINE	Alu	AluSz6
CAediting_943213	chr12_122759671_+	SINE	Alu	AluSz6
CAediting_943214	chr12_122759710_+	SINE	Alu	AluSz6
CAediting_943215	chr12_122760569_+	SINE	Alu	AluYk4
CAediting_943216	chr12_122760570_+	SINE	Alu	AluYk4
CAediting_943217	chr12_122760584_+	SINE	Alu	AluYk4
CAediting_943218	chr12_122760651_+	SINE	Alu	AluYk4
CAediting_943219	chr12_122760652_+	SINE	Alu	AluYk4
CAediting_943220	chr12_122760713_+	SINE	Alu	AluYk4
CAediting_943221	chr12_122760955_+	SINE	Alu	AluJr
CAediting_943222	chr12_122761028_+	SINE	Alu	AluJr
CAediting_943223	chr12_122761033_+	SINE	Alu	AluJr
CAediting_943224	chr12_122761054_+	SINE	Alu	AluJr
CAediting_943225	chr12_122761070_+	SINE	Alu	AluJr
CAediting_943226	chr12_122761103_+	SINE	Alu	AluJr
CAediting_943227	chr12_122761156_+	SINE	Alu	AluSx
CAediting_943228	chr12_122761157_+	SINE	Alu	AluSx
CAediting_943229	chr12_122761162_+	SINE	Alu	AluSx
CAediting_943230	chr12_122761247_+	SINE	Alu	AluSx
CAediting_943231	chr12_122761256_+	SINE	Alu	AluSx
CAediting_943232	chr12_122761281_+	SINE	Alu	AluSx
CAediting_943233	chr12_122761291_+	SINE	Alu	AluSx
CAediting_943234	chr12_122761297_+	SINE	Alu	AluSx
CAediting_943235	chr12_122761301_+	SINE	Alu	AluSx
CAediting_943236	chr12_122761337_+	SINE	Alu	AluSx
CAediting_943237	chr12_122761347_+	SINE	Alu	AluSx
CAediting_943238	chr12_122761362_+	SINE	Alu	AluSx
CAediting_943239	chr12_122761399_+	SINE	Alu	AluSx
CAediting_943240	chr12_122761595_+	SINE	Alu	AluJb
CAediting_943241	chr12_122761613_+	SINE	Alu	AluJb
CAediting_943242	chr12_122761662_+	SINE	Alu	AluJb
CAediting_943243	chr12_122761665_+	SINE	Alu	AluJb
CAediting_943244	chr12_122761795_+	SINE	Alu	AluJb
CAediting_943245	chr12_122761820_+	SINE	Alu	AluJb
CAediting_943246	chr12_122763144_+	SINE	Alu	AluYj4
CAediting_943247	chr12_122763173_+	SINE	Alu	AluYj4
CAediting_943248	chr12_122763224_+	SINE	Alu	AluYj4
CAediting_943249	chr12_122763268_+	SINE	Alu	AluYj4
CAediting_943250	chr12_122763284_+	SINE	Alu	AluYj4
CAediting_943251	chr12_122763292_+	SINE	Alu	AluYj4
CAediting_943252	chr12_122763310_+	SINE	Alu	AluYj4
CAediting_943253	chr12_122763327_+	SINE	Alu	AluYj4
CAediting_943254	chr12_122763331_+	SINE	Alu	AluYj4
CAediting_943255	chr12_122763434_+	SINE	Alu	AluSp
CAediting_943256	chr12_122763450_+	SINE	Alu	AluSp
CAediting_943257	chr12_122763603_+	SINE	Alu	AluSp
CAediting_943258	chr12_122764557_+	SINE	Alu	AluYf1
CAediting_943259	chr12_122764579_+	SINE	Alu	AluYf1
CAediting_943267	chr12_122769152_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943268	chr12_122769154_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943269	chr12_122769156_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943270	chr12_122769160_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943271	chr12_122769166_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943272	chr12_122769170_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943273	chr12_122769172_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943274	chr12_122769174_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943275	chr12_122769176_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943276	chr12_122769182_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943277	chr12_122769186_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943278	chr12_122769190_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943279	chr12_122769198_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943280	chr12_122769202_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943281	chr12_122769204_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943282	chr12_122769206_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943283	chr12_122769210_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943284	chr12_122769220_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943285	chr12_122769224_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943286	chr12_122769226_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943287	chr12_122769228_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943288	chr12_122769240_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943289	chr12_122769248_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943290	chr12_122769252_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943291	chr12_122769256_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943292	chr12_122769260_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943293	chr12_122769262_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943294	chr12_122769264_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943295	chr12_122769266_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943296	chr12_122769268_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943297	chr12_122769270_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943298	chr12_122769274_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943299	chr12_122769276_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943300	chr12_122769288_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943301	chr12_122769290_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943302	chr12_122769296_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943303	chr12_122769298_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943304	chr12_122769300_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943305	chr12_122769302_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943306	chr12_122769306_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943307	chr12_122769308_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943308	chr12_122769310_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943309	chr12_122769312_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943310	chr12_122769318_+	Simple_repeat	Simple_repeat	(AT)n
CAediting_943311	chr12_122769530_+	SINE	Alu	AluSg
CAediting_943312	chr12_122769558_+	SINE	Alu	AluSg
CAediting_943313	chr12_122769624_+	SINE	Alu	AluSg
CAediting_943314	chr12_122769636_+	SINE	Alu	AluSg
CAediting_943315	chr12_122769646_+	SINE	Alu	AluSg
CAediting_943316	chr12_122769757_+	SINE	Alu	AluSg
CAediting_943317	chr12_122769766_+	SINE	Alu	AluSg
CAediting_943318	chr12_122769767_+	SINE	Alu	AluSg
CAediting_943319	chr12_122769779_+	SINE	Alu	AluSg
CAediting_943320	chr12_122769801_+	SINE	Alu	AluSg

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RNA A-to-I editing events in the alternative splicing sites for DENR

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_943272	chr12_122769170_+	122769169:122769177	5SS	2+0i	CATATATAT	-8.53	CGTATATAT	-11.68
IR	CAediting_943273	chr12_122769172_+	122769169:122769177	5SS	0+1i	CATATATAT	-8.53	CATGTATAT	-0.35
IR	CAediting_943274	chr12_122769174_+	122769169:122769177	5SS	0+3i	CATATATAT	-8.53	CATATGTAT	-13.63
IR	CAediting_943275	chr12_122769176_+	122769169:122769177	5SS	0+5i	CATATATAT	-8.53	CATATATGT	-2.47
IR	CAediting_943278	chr12_122769190_+	122769189:122769197	5SS	2+0i	CATATATGT	-2.47	CGTATATGT	-3.1
IR	CAediting_943283	chr12_122769210_+	122769207:122769215	5SS	0+1i	CATATACAC	-11.09	CATGTACAC	-2.91
IR	CAediting_943295	chr12_122769266_+	122769265:122769273	5SS	2+0i	CATATATGT	-2.47	CGTATATGT	-3.1
IR	CAediting_943296	chr12_122769268_+	122769265:122769273	5SS	0+1i	CATATATGT	-2.47	CATGTATGT	5.71
IR	CAediting_943297	chr12_122769270_+	122769265:122769273	5SS	0+3i	CATATATGT	-2.47	CATATGTGT	-5.58
IR	CAediting_943301	chr12_122769290_+	122769289:122769311	3SS	0+19i	TATATGTATACATATATACACAT	-18.55	TGTATGTATACATATATACACAT	-18.44
IR	CAediting_943302	chr12_122769296_+	122769289:122769311	3SS	0+13i	TATATGTATACATATATACACAT	-18.55	TATATGTGTACATATATACACAT	-17.9
IR	CAediting_943303	chr12_122769298_+	122769289:122769311	3SS	0+11i	TATATGTATACATATATACACAT	-18.55	TATATGTATGCATATATACACAT	-18.42
IR	CAediting_943304	chr12_122769300_+	122769289:122769311	3SS	0+9i	TATATGTATACATATATACACAT	-18.55	TATATGTATACGTATATACACAT	-18.19
IR	CAediting_943304	chr12_122769300_+	122769299:122769321	3SS	0+19i	CATATATACACATATGTATACAT	-19.99	CGTATATACACATATGTATACAT	-20.41
IR	CAediting_943305	chr12_122769302_+	122769289:122769311	3SS	0+7i	TATATGTATACATATATACACAT	-18.55	TATATGTATACATGTATACACAT	-19.38
IR	CAediting_943305	chr12_122769302_+	122769299:122769321	3SS	0+17i	CATATATACACATATGTATACAT	-19.99	CATGTATACACATATGTATACAT	-19.58
IR	CAediting_943306	chr12_122769306_+	122769289:122769311	3SS	0+3i	TATATGTATACATATATACACAT	-18.55	TATATGTATACATATATGCACAT	-23.67
IR	CAediting_943306	chr12_122769306_+	122769299:122769321	3SS	0+13i	CATATATACACATATGTATACAT	-19.99	CATATATGCACATATGTATACAT	-19.87
IR	CAediting_943307	chr12_122769308_+	122769289:122769311	3SS	0+1i	TATATGTATACATATATACACAT	-18.55	TATATGTATACATATATACGCAT	-9.8
IR	CAediting_943307	chr12_122769308_+	122769299:122769321	3SS	0+11i	CATATATACACATATGTATACAT	-19.99	CATATATACGCATATGTATACAT	-20.67
IR	CAediting_943308	chr12_122769310_+	122769289:122769311	3SS	2+0i	TATATGTATACATATATACACAT	-18.55	TATATGTATACATATATACACGT	-17.68
IR	CAediting_943308	chr12_122769310_+	122769299:122769321	3SS	0+9i	CATATATACACATATGTATACAT	-19.99	CATATATACACGTATGTATACAT	-19.22
IR	CAediting_943309	chr12_122769312_+	122769299:122769321	3SS	0+7i	CATATATACACATATGTATACAT	-19.99	CATATATACACATGTGTATACAT	-20.62
IR	CAediting_943310	chr12_122769318_+	122769299:122769321	3SS	0+1i	CATATATACACATATGTATACAT	-19.99	CATATATACACATATGTATGCAT	-11.24
IR	CAediting_943311	chr12_122769530_+	122769511:122769533	3SS	0+1i	TCTCTTTTTTTTTTTTGACAGAG	-8	TCTCTTTTTTTTTTTTGACGGAG	0.75

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000139726.9.DENR.

Correlation between RNA A-to-I editing and PSI for ENSG00000139726.9.DENR.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DENR

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for DENR

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for DENR

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_943262	chr12_122769110_+	ENSG00000139726.9	ENST00000280557	hsa-miR-455-3p	122769107	122769114	8mer-1a	122769092	122769114	156.00	-22.37
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-212-5p	122769126	122769132	7mer-m8	122769110	122769133	158.00	-18.19
CAediting_943273	chr12_122769172_+	ENSG00000139726.9	ENST00000280557	hsa-miR-10226	122769165	122769171	7mer-m8	122769151	122769172	143.00	-8.50
CAediting_943275	chr12_122769176_+	ENSG00000139726.9	ENST00000280557	hsa-miR-466	122769173	122769179	7mer-m8	122769158	122769180	149.00	-9.94
CAediting_943275	chr12_122769176_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4789-3p	122769172	122769179	8mer-1a	122769160	122769179	165.00	-18.35
CAediting_943279	chr12_122769198_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3941	122769195	122769201	7mer-m8	122769179	122769202	148.00	-10.44
CAediting_943279	chr12_122769198_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4789-3p	122769192	122769198	7mer-m8	122769180	122769199	165.00	-22.86
CAediting_943279	chr12_122769198_+	ENSG00000139726.9	ENST00000280557	hsa-miR-8485	122769194	122769201	8mer-1a	122769181	122769201	144.00	-11.47
CAediting_943286	chr12_122769226_+	ENSG00000139726.9	ENST00000280557	hsa-miR-448	122769221	122769227	7mer-m8	122769208	122769228	159.00	-13.15
CAediting_943293	chr12_122769262_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4666b	122769257	122769263	7mer-m8	122769242	122769264	150.00	-10.19
CAediting_943293	chr12_122769262_+	ENSG00000139726.9	ENST00000280557	hsa-miR-5011-3p	122769258	122769263	6mer	122769243	122769264	151.00	-21.27
CAediting_943297	chr12_122769270_+	ENSG00000139726.9	ENST00000280557	hsa-miR-466	122769267	122769273	7mer-m8	122769252	122769274	145.00	-9.94
CAediting_943297	chr12_122769270_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4789-3p	122769266	122769273	8mer-1a	122769252	122769273	158.00	-16.24
CAediting_943298	chr12_122769274_+	ENSG00000139726.9	ENST00000280557	hsa-miR-466	122769269	122769275	7mer-m8	122769254	122769276	149.00	-8.09
CAediting_943298	chr12_122769274_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4789-3p	122769268	122769275	8mer-1a	122769256	122769275	160.00	-15.15
CAediting_943299	chr12_122769276_+	ENSG00000139726.9	ENST00000280557	hsa-miR-5689	122769270	122769277	8mer-1a	122769257	122769277	146.00	-9.01
CAediting_943302	chr12_122769296_+	ENSG00000139726.9	ENST00000280557	hsa-miR-466	122769291	122769297	7mer-m8	122769276	122769298	149.00	-8.09
CAediting_943302	chr12_122769296_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4789-3p	122769290	122769297	8mer-1a	122769278	122769297	165.00	-18.35
CAediting_943303	chr12_122769298_+	ENSG00000139726.9	ENST00000280557	hsa-miR-5689	122769292	122769299	8mer-1a	122769279	122769299	146.00	-9.01
CAediting_943309	chr12_122769312_+	ENSG00000139726.9	ENST00000280557	hsa-miR-10226	122769305	122769311	7mer-m8	122769291	122769312	143.00	-9.87
CAediting_943309	chr12_122769312_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4643	122769308	122769315	8mer-1a	122769294	122769315	158.00	-12.79
CAediting_943309	chr12_122769312_+	ENSG00000139726.9	ENST00000280557	hsa-miR-466	122769309	122769315	7mer-m8	122769294	122769316	140.00	-8.41
CAediting_943312	chr12_122769558_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4793-3p	122769556	122769562	7mer-m8	122769540	122769563	143.00	-18.98
CAediting_943312	chr12_122769558_+	ENSG00000139726.9	ENST00000280557	hsa-miR-508-5p	122769552	122769558	7mer-m8	122769535	122769559	150.00	-23.37
CAediting_943312	chr12_122769558_+	ENSG00000139726.9	ENST00000280557	hsa-miR-766-3p	122769551	122769557	7mer-m8	122769536	122769558	151.00	-27.25
CAediting_943312	chr12_122769558_+	ENSG00000139726.9	ENST00000280557	hsa-miR-7703	122769555	122769561	7mer-m8	122769540	122769562	158.00	-28.68
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-2276-5p	122769128	122769135	8mer-1a	122769108	122769135	146.00	-21.19
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3190-5p	122769124	122769131	8mer-1a	122769111	122769131	141.00	-17.64
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-642a-5p	122769129	122769135	7mer-m8	122769112	122769136	150.00	-16.18
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-6824-3p	122769127	122769132	6mer	122769113	122769133	143.00	-16.74
CAediting_943280	chr12_122769202_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3177-5p	122769200	122769207	8mer-1a	122769185	122769207	150.00	-17.92
CAediting_943280	chr12_122769202_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4643	122769197	122769203	7mer-1a	122769184	122769203	143.00	-13.46
CAediting_943280	chr12_122769202_+	ENSG00000139726.9	ENST00000280557	hsa-miR-466	122769197	122769203	7mer-m8	122769182	122769204	155.00	-12.77
CAediting_943280	chr12_122769202_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4789-3p	122769196	122769203	8mer-1a	122769180	122769203	158.00	-18.08
CAediting_943281	chr12_122769204_+	ENSG00000139726.9	ENST00000280557	hsa-miR-448	122769200	122769205	6mer	122769184	122769206	140.00	-9.51
CAediting_943281	chr12_122769204_+	ENSG00000139726.9	ENST00000280557	hsa-miR-5689	122769198	122769205	8mer-1a	122769184	122769205	146.00	-8.76
CAediting_943283	chr12_122769210_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3177-5p	122769208	122769215	8mer-1a	122769192	122769215	144.00	-14.96
CAediting_943283	chr12_122769210_+	ENSG00000139726.9	ENST00000280557	hsa-miR-493-5p	122769207	122769213	7mer-m8	122769192	122769214	163.00	-15.45
CAediting_943284	chr12_122769220_+	ENSG00000139726.9	ENST00000280557	hsa-miR-466	122769215	122769221	7mer-m8	122769200	122769222	140.00	-8.73
CAediting_943285	chr12_122769224_+	ENSG00000139726.9	ENST00000280557	hsa-miR-493-5p	122769221	122769227	7mer-m8	122769208	122769228	142.00	-10.57
CAediting_943296	chr12_122769268_+	ENSG00000139726.9	ENST00000280557	hsa-miR-10226	122769261	122769267	7mer-m8	122769247	122769268	147.00	-10.58
CAediting_943301	chr12_122769290_+	ENSG00000139726.9	ENST00000280557	hsa-miR-10226	122769283	122769289	7mer-m8	122769269	122769290	143.00	-9.87
CAediting_943310	chr12_122769318_+	ENSG00000139726.9	ENST00000280557	hsa-miR-5689	122769312	122769319	8mer-1a	122769299	122769319	150.00	-10.84
CAediting_943314	chr12_122769636_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3614-5p	122769629	122769635	7mer-m8	122769613	122769636	152.00	-25.27
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000455982	hsa-miR-326	122769761	122769767	7mer-m8	122769749	122769768	140.00	-13.25
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000455982	hsa-miR-330-5p	122769761	122769767	7mer-m8	122769745	122769768	141.00	-20.50
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000455982	hsa-miR-4314	122769760	122769766	7mer-m8	122769749	122769767	141.00	-20.85
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000455982	hsa-miR-514a-5p	122769762	122769768	7mer-m8	122769746	122769769	150.00	-18.62
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000455982	hsa-miR-514a-5p	122769762	122769768	7mer-m8	122769746	122769769	150.00	-18.62
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000455982	hsa-miR-514a-5p	122769762	122769768	7mer-m8	122769746	122769769	150.00	-18.62
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000280557	hsa-miR-326	122769761	122769767	7mer-m8	122769749	122769768	140.00	-13.25
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000280557	hsa-miR-330-5p	122769761	122769767	7mer-m8	122769745	122769768	141.00	-20.50
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4314	122769760	122769766	7mer-m8	122769749	122769767	141.00	-20.85
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000280557	hsa-miR-514a-5p	122769762	122769768	7mer-m8	122769746	122769769	150.00	-18.62
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000280557	hsa-miR-514a-5p	122769762	122769768	7mer-m8	122769746	122769769	150.00	-18.62
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000280557	hsa-miR-514a-5p	122769762	122769768	7mer-m8	122769746	122769769	150.00	-18.62
CAediting_943318	chr12_122769767_+	ENSG00000139726.9	ENST00000455982	hsa-miR-3189-3p	122769761	122769767	7mer-m8	122769749	122769768	153.00	-22.76
CAediting_943318	chr12_122769767_+	ENSG00000139726.9	ENST00000455982	hsa-miR-6813-3p	122769762	122769768	7mer-m8	122769749	122769769	140.00	-10.68
CAediting_943318	chr12_122769767_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3189-3p	122769761	122769767	7mer-m8	122769749	122769768	153.00	-22.76
CAediting_943318	chr12_122769767_+	ENSG00000139726.9	ENST00000280557	hsa-miR-6813-3p	122769762	122769768	7mer-m8	122769749	122769769	140.00	-10.68
CAediting_943319	chr12_122769779_+	ENSG00000139726.9	ENST00000455982	hsa-miR-106a-3p	122769775	122769780	6mer	122769760	122769781	157.00	-22.52
CAediting_943319	chr12_122769779_+	ENSG00000139726.9	ENST00000280557	hsa-miR-106a-3p	122769775	122769780	6mer	122769760	122769781	157.00	-22.52
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000455982	hsa-miR-1972	122769800	122769806	7mer-1a	122769785	122769806	144.00	-30.91
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000455982	hsa-miR-1972	122769800	122769806	7mer-1a	122769785	122769806	144.00	-30.91
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000280557	hsa-miR-1972	122769800	122769806	7mer-1a	122769785	122769806	144.00	-30.91
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000280557	hsa-miR-1972	122769800	122769806	7mer-1a	122769785	122769806	144.00	-30.91

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_943319	chr12_122769779_+	ENSG00000139726.9	ENST00000455982	hsa-miR-2054	122769774	122769780	7mer-m8	122769757	122769781	146	-11.94
CAediting_943319	chr12_122769779_+	ENSG00000139726.9	ENST00000455982	hsa-miR-3686	122769776	122769782	7mer-m8	122769763	122769783	143	-12.44
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000455982	hsa-miR-4478	122769754	122769760	7mer-m8	122769745	122769761	154	-23.4
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000455982	hsa-miR-4505	122769797	122769803	7mer-m8	122769788	122769804	143	-23.62
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000455982	hsa-miR-485-5p	122769755	122769761	7mer-m8	122769741	122769762	145	-16.89
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000455982	hsa-miR-5787	122769797	122769803	7mer-m8	122769786	122769804	150	-28.49
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000455982	hsa-miR-6884-5p	122769755	122769761	7mer-m8	122769741	122769762	154	-20.71
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000455982	hsa-miR-7160-5p	122769752	122769758	7mer-m8	122769741	122769759	154	-21.5
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000455982	hsa-miR-887-5p	122769759	122769766	8mer-1a	122769747	122769766	143	-13.53
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-204-5p	122769129	122769135	7mer-m8	122769114	122769136	152	-17.68
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-204-5p	122769129	122769135	7mer-m8	122769114	122769136	152	-17.68
CAediting_943319	chr12_122769779_+	ENSG00000139726.9	ENST00000280557	hsa-miR-2054	122769774	122769780	7mer-m8	122769757	122769781	146	-11.94
CAediting_943312	chr12_122769558_+	ENSG00000139726.9	ENST00000280557	hsa-miR-20a-3p	122769556	122769562	7mer-m8	122769543	122769563	146	-14.2
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-211-5p	122769129	122769135	7mer-m8	122769114	122769136	152	-20.39
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-211-5p	122769129	122769135	7mer-m8	122769114	122769136	152	-20.39
CAediting_943263	chr12_122769130_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3187-3p	122769123	122769130	8mer-1a	122769111	122769130	141	-19.63
CAediting_943311	chr12_122769530_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3664-5p	122769527	122769533	7mer-m8	122769513	122769534	145	-12.66
CAediting_943319	chr12_122769779_+	ENSG00000139726.9	ENST00000280557	hsa-miR-3686	122769776	122769782	7mer-m8	122769763	122769783	143	-12.44
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4287	122769130	122769137	8mer-1a	122769120	122769137	145	-20.17
CAediting_943313	chr12_122769624_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4478	122769621	122769627	7mer-m8	122769613	122769628	149	-25.05
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4478	122769754	122769760	7mer-m8	122769745	122769761	154	-23.4
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4505	122769797	122769803	7mer-m8	122769788	122769804	143	-23.62
CAediting_943311	chr12_122769530_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4522	122769528	122769534	7mer-m8	122769515	122769535	144	-12.38
CAediting_943287	chr12_122769228_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4643	122769226	122769232	7mer-m8	122769214	122769233	152	-10.62
CAediting_943313	chr12_122769624_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4649-3p	122769618	122769624	7mer-m8	122769605	122769625	140	-14.11
CAediting_943289	chr12_122769248_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4666a-5p	122769241	122769247	7mer-m8	122769224	122769248	145	-14.68
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-4685-3p	122769130	122769137	8mer-1a	122769117	122769137	145	-19.9
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000280557	hsa-miR-485-5p	122769755	122769761	7mer-m8	122769741	122769762	145	-16.89
CAediting_943262	chr12_122769110_+	ENSG00000139726.9	ENST00000280557	hsa-miR-5000-5p	122769106	122769112	7mer-m8	122769092	122769113	140	-13.65
CAediting_943293	chr12_122769262_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769260	122769267	8mer-1a	122769248	122769267	142	-7.26
CAediting_943294	chr12_122769264_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769260	122769267	8mer-1a	122769248	122769267	142	-7.26
CAediting_943295	chr12_122769266_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769260	122769267	8mer-1a	122769248	122769267	142	-7.26
CAediting_943300	chr12_122769288_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769282	122769289	8mer-1a	122769270	122769289	140	-7.92
CAediting_943306	chr12_122769306_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769304	122769311	8mer-1a	122769292	122769311	140	-7.92
CAediting_943307	chr12_122769308_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769304	122769311	8mer-1a	122769292	122769311	140	-7.92
CAediting_943308	chr12_122769310_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769304	122769311	8mer-1a	122769292	122769311	140	-7.92
CAediting_943271	chr12_122769166_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769164	122769171	8mer-1a	122769152	122769171	142	-6.9
CAediting_943272	chr12_122769170_+	ENSG00000139726.9	ENST00000280557	hsa-miR-511-3p	122769164	122769171	8mer-1a	122769152	122769171	142	-6.9
CAediting_943271	chr12_122769166_+	ENSG00000139726.9	ENST00000280557	hsa-miR-568	122769162	122769167	6mer	122769149	122769168	141	-9.88
CAediting_943320	chr12_122769801_+	ENSG00000139726.9	ENST00000280557	hsa-miR-5787	122769797	122769803	7mer-m8	122769786	122769804	150	-28.49
CAediting_943315	chr12_122769646_+	ENSG00000139726.9	ENST00000280557	hsa-miR-6811-3p	122769645	122769650	6mer	122769631	122769651	143	-20.6
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000280557	hsa-miR-6884-5p	122769755	122769761	7mer-m8	122769741	122769762	154	-20.71
CAediting_943313	chr12_122769624_+	ENSG00000139726.9	ENST00000280557	hsa-miR-7160-5p	122769619	122769625	7mer-m8	122769606	122769626	146	-17.63
CAediting_943316	chr12_122769757_+	ENSG00000139726.9	ENST00000280557	hsa-miR-7160-5p	122769752	122769758	7mer-m8	122769741	122769759	154	-21.5
CAediting_943317	chr12_122769766_+	ENSG00000139726.9	ENST00000280557	hsa-miR-887-5p	122769759	122769766	8mer-1a	122769747	122769766	143	-13.53
CAediting_943263	chr12_122769130_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943263	chr12_122769130_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943263	chr12_122769130_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943264	chr12_122769131_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53
CAediting_943265	chr12_122769132_+	ENSG00000139726.9	ENST00000280557	hsa-miR-9-5p	122769127	122769132	6mer	122769110	122769133	146	-17.53

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000139726.9	ENST00000455982	hsa-miR-624-3p	122770038	122770044	7mer-m8	122770024	122770045	144	-17.39
CAediting_980496	chr14_31014685_-	ENSG00000139726.9	ENST00000280557	hsa-miR-624-3p	122770038	122770044	7mer-m8	122770024	122770045	144	-17.39
CAediting_1351755	chr19_40282625_-	ENSG00000139726.9	ENST00000455982	hsa-miR-641	122769948	122769954	7mer-m8	122769933	122769955	150	-13.02
CAediting_86358	chr1_109598906_+	ENSG00000139726.9	ENST00000455982	hsa-miR-197-5p	122770035	122770041	7mer-m8	122770020	122770042	140	-16.01
CAediting_1351755	chr19_40282625_-	ENSG00000139726.9	ENST00000280557	hsa-miR-641	122769948	122769954	7mer-m8	122769933	122769955	150	-13.02
CAediting_86358	chr1_109598906_+	ENSG00000139726.9	ENST00000280557	hsa-miR-197-5p	122770035	122770041	7mer-m8	122770020	122770042	140	-16.01
CAediting_580943	chr7_100356700_+	ENSG00000139726.9	ENST00000280557	hsa-miR-6840-3p	122769595	122769601	7mer-m8	122769586	122769602	141	-27.37
CAediting_524911	chr7_5495852_-	ENSG00000139726.9	ENST00000280557	hsa-miR-589-3p	122770430	122770437	8mer-1a	122770414	122770437	153	-19.03

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000139726.9	ENST00000280557	hsa-miR-589-3p	122769375	122769381	7mer-m8	122769360	122769382	148	-18.25
CAediting_1351755	chr19_40282625_-	ENSG00000139726.9	ENST00000280557	hsa-miR-641	122770568	122770574	7mer-m8	122770552	122770575	140	-8.67

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for DENR

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for DENR

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
OV	CAediting_943265	chr12_122769132_+	.	.	.	.	0.00193804259129191	0.395406243415608
BRCA	CAediting_943275	chr12_122769176_+	4.06339238123193e-09	0.310810996788263	0.00450568885559961	0.153021594786088	.	.
LUAD	CAediting_943275	chr12_122769176_+	1.44722441863056e-05	0.353939106676452	.	.	.	.
LUSC	CAediting_943275	chr12_122769176_+	4.23412898911586e-06	0.32582314930177	.	.	.	.
HNSC	CAediting_943275	chr12_122769176_+	0.0383893347475062	0.175849133264659	.	.	.	.
STAD	CAediting_943275	chr12_122769176_+	1.78427505427452e-10	0.365648836856265	.	.	.	.
ESCA	CAediting_943275	chr12_122769176_+	0.00362892751375515	0.253383378666191	.	.	.	.
OV	CAediting_943275	chr12_122769176_+	4.10261232540659e-15	0.425596036265449	.	.	.	.
SKCM	CAediting_943275	chr12_122769176_+	0.00107955860162908	0.354628080925044	.	.	.	.
BRCA	CAediting_943289	chr12_122769248_+	0.000708505014121871	0.231865863873377	.	.	.	.
LUAD	CAediting_943289	chr12_122769248_+	0.00372743068577792	0.344689946359602	.	.	.	.
SKCM	CAediting_943289	chr12_122769248_+	0.0172736606647029	0.311575482865873	.	.	.	.
STAD	CAediting_943291	chr12_122769256_+	0.00089501041917473	0.313698089769045	.	.	.	.

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Relation with cancer stages for DENR

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_943289	chr12_122769248_+	0.0154445775748478	0.261953338554538
SKCM	pathologic_stage	CAediting_943289	chr12_122769248_+	0.0195928955605653	0.335892583290175

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Relation with survival for DENR

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
ESCA	CAediting_943275	chr12_122769176_+	0.00894687659599258	0.0102278	69.9816

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RelatedDrugs for DENR

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for DENR

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene