Home

Download

Statistics

Examples

Help

Contact

Editing gene: DEGS1 (CAeditome ID:8560)

Gene summary for DEGS1

Gene summary

Gene information	Gene symbol	DEGS1
	Gene ID	8560
	Gene name	delta 4-desaturase, sphingolipid 1
	Synonyms	DEGS\|DEGS-1\|DES1\|Des-1\|FADS7\|HLD18\|MIG15\|MLD
	Cytomap	1q42.11
	Type of gene	protein-coding
	Description	sphingolipid delta(4)-desaturase DES1cell migration-inducing gene 15 proteindegenerative spermatocyte homolog 1, lipid desaturasedegenerative spermatocyte homolog, lipid desaturasedihydroceramide desaturase 1membrane fatty acid (lipid) desaturasemem
	Modification date	20210518
	UniProtAcc	O15121
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
DEGS1	GO:0050251	Sphingolipid delta(4)-desaturase DES1	23143414
DEGS1	GO:0005739	Sphingolipid delta(4)-desaturase DES1	0000052

Top

RNA A-to-I events for DEGS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000143753.11

RNA A-to-I editing events in Cancer.

CAediting_140984(224184543, +), CAediting_140985(224184567, +), CAediting_140986(224184576, +), CAediting_140987(224184592, +), CAediting_140988(224184611, +), CAediting_140989(224184612, +), CAediting_140990(224184629, +), CAediting_140991(224184651, +), CAediting_140992(224184661, +), CAediting_140993(224184678, +), CAediting_140994(224184695, +), CAediting_140995(224184699, +), CAediting_140996(224184701, +), CAediting_140997(224184713, +), CAediting_140998(224184716, +), CAediting_140999(224184750, +), CAediting_141000(224184778, +), CAediting_141001(224184790, +), CAediting_141002(224184792, +), CAediting_141003(224184800, +), CAediting_141004(224184866, +), CAediting_141005(224184871, +), CAediting_141006(224184879, +), CAediting_141007(224184880, +), CAediting_141008(224184885, +), CAediting_141009(224184896, +), CAediting_141010(224184902, +), CAediting_141011(224184928, +), CAediting_141012(224184953, +), CAediting_141013(224185131, +), CAediting_141014(224185175, +), CAediting_141015(224185229, +), CAediting_141016(224185275, +), CAediting_141017(224185354, +), CAediting_141018(224185355, +), CAediting_141019(224185521, +), CAediting_141020(224185539, +), CAediting_141021(224185574, +), CAediting_141022(224185579, +), CAediting_141023(224185580, +), CAediting_141024(224185599, +), CAediting_141025(224185600, +), CAediting_141026(224185603, +), CAediting_141027(224185618, +), CAediting_141028(224185627, +), CAediting_141029(224185630, +), CAediting_141030(224185640, +), CAediting_141031(224185642, +), CAediting_141032(224185688, +), CAediting_141033(224185691, +), CAediting_141034(224185697, +), CAediting_141035(224185710, +), CAediting_141036(224185728, +), CAediting_141037(224185755, +), CAediting_141038(224185756, +), CAediting_141039(224185945, +), CAediting_141040(224185946, +), CAediting_141041(224185960, +), CAediting_141042(224185963, +), CAediting_141043(224185968, +), CAediting_141044(224185973, +), CAediting_141045(224186061, +), CAediting_141046(224186064, +), CAediting_141047(224186070, +), CAediting_141048(224186089, +), CAediting_141049(224186093, +), CAediting_141050(224186108, +), CAediting_141051(224186117, +), CAediting_141052(224186125, +), CAediting_141053(224186126, +), CAediting_141054(224186177, +), CAediting_141055(224186193, +), CAediting_141056(224186201, +), CAediting_141057(224186210, +), CAediting_141058(224186228, +), CAediting_141059(224186253, +), CAediting_141060(224186458, +), CAediting_141061(224186459, +), CAediting_141062(224186481, +), CAediting_141063(224186494, +), CAediting_141064(224186526, +), CAediting_141065(224186550, +), CAediting_141066(224186566, +), CAediting_141067(224186582, +), CAediting_141068(224186586, +), CAediting_141069(224186592, +), CAediting_141070(224186602, +), CAediting_141071(224186619, +), CAediting_141072(224186625, +), CAediting_141073(224186633, +), CAediting_141074(224186634, +), CAediting_141075(224186695, +), CAediting_141076(224186697, +), CAediting_141077(224187053, +), CAediting_141078(224187083, +), CAediting_141079(224187088, +), CAediting_141080(224187093, +), CAediting_141081(224187106, +), CAediting_141082(224187143, +), CAediting_141083(224187148, +), CAediting_141084(224187156, +), CAediting_141085(224187187, +), CAediting_141086(224187188, +), CAediting_141087(224187204, +), CAediting_141088(224187210, +), CAediting_141089(224187214, +), CAediting_141090(224187220, +), CAediting_141091(224187290, +), CAediting_141092(224187396, +), CAediting_141093(224187398, +), CAediting_141094(224187459, +), CAediting_141095(224187484, +), CAediting_141096(224187488, +), CAediting_141097(224187498, +), CAediting_141098(224187511, +), CAediting_141099(224187516, +), CAediting_141100(224187524, +), CAediting_141101(224187525, +), CAediting_141102(224187543, +), CAediting_141103(224187564, +), CAediting_141104(224187589, +), CAediting_141105(224187593, +), CAediting_141106(224187617, +), CAediting_141107(224187628, +), CAediting_141108(224187984, +), CAediting_141109(224188087, +), CAediting_141110(224188111, +), CAediting_141111(224188119, +), CAediting_141112(224188150, +), CAediting_141113(224188164, +), CAediting_141114(224188173, +), CAediting_141115(224188234, +), CAediting_141116(224190377, +), CAediting_141117(224190389, +), CAediting_141118(224190419, +), CAediting_141119(224190432, +), CAediting_141120(224190457, +), CAediting_141121(224190459, +), CAediting_141122(224190462, +), CAediting_141123(224190468, +), CAediting_141124(224190475, +), CAediting_141125(224190484, +), CAediting_141126(224190487, +), CAediting_141127(224190497, +), CAediting_141128(224190499, +), CAediting_141129(224190519, +), CAediting_141130(224190523, +), CAediting_141131(224190541, +), CAediting_141132(224190543, +), CAediting_141133(224190745, +), CAediting_141134(224190751, +), CAediting_141135(224190767, +), CAediting_141136(224190822, +), CAediting_141137(224190823, +), CAediting_141138(224190835, +), CAediting_141139(224190852, +), CAediting_141140(224190862, +), CAediting_141141(224190864, +), CAediting_141142(224190878, +), CAediting_141143(224190896, +), CAediting_141144(224190942, +), CAediting_141145(224190957, +), CAediting_141146(224190974, +), CAediting_141147(224190990, +), CAediting_141148(224191116, +), CAediting_141149(224191132, +), CAediting_141150(224191133, +), CAediting_141151(224191138, +), CAediting_141152(224191155, +), CAediting_141153(224191173, +), CAediting_141154(224191178, +), CAediting_141155(224191202, +), CAediting_141156(224191204, +), CAediting_141157(224191206, +), CAediting_141158(224191212, +), CAediting_141159(224191223, +), CAediting_141160(224191226, +), CAediting_141161(224191228, +), CAediting_141162(224191229, +), CAediting_141163(224191230, +), CAediting_141164(224191232, +), CAediting_141165(224191238, +), CAediting_141166(224191243, +), CAediting_141167(224191251, +), CAediting_141168(224191263, +), CAediting_141169(224191267, +), CAediting_141170(224191269, +), CAediting_141171(224191275, +), CAediting_141172(224191279, +), CAediting_141173(224191302, +), CAediting_141174(224191311, +), CAediting_141175(224191431, +), CAediting_141176(224191442, +), CAediting_141177(224191443, +), CAediting_141178(224191659, +), CAediting_141179(224191695, +), CAediting_141180(224191698, +), CAediting_141181(224191699, +), CAediting_141182(224191734, +), CAediting_141183(224191736, +), CAediting_141184(224191760, +), CAediting_141185(224191777, +), CAediting_141186(224191780, +), CAediting_141187(224191858, +), CAediting_141188(224191859, +), CAediting_141189(224191871, +), CAediting_141190(224191873, +), CAediting_141191(224191877, +), CAediting_141192(224192790, +), CAediting_141193(224192798, +), CAediting_141194(224192799, +), CAediting_141195(224192834, +), CAediting_141196(224192844, +), CAediting_141197(224192889, +), CAediting_141198(224192892, +), CAediting_141199(224192893, +), CAediting_141200(224192894, +), CAediting_141201(224192933, +), CAediting_141202(224193005, +), CAediting_141203(224193009, +), CAediting_141204(224193010, +), CAediting_141205(224193012, +), CAediting_141206(224193055, +),

Top

RNA editing positional annotations for DEGS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_140984	chr1_224184543_+	ncRNA_intronic
CAediting_140985	chr1_224184567_+	ncRNA_intronic
CAediting_140986	chr1_224184576_+	ncRNA_intronic
CAediting_140987	chr1_224184592_+	ncRNA_intronic
CAediting_140988	chr1_224184611_+	ncRNA_intronic
CAediting_140989	chr1_224184612_+	ncRNA_intronic
CAediting_140990	chr1_224184629_+	ncRNA_intronic
CAediting_140991	chr1_224184651_+	ncRNA_intronic
CAediting_140992	chr1_224184661_+	ncRNA_intronic
CAediting_140993	chr1_224184678_+	ncRNA_intronic
CAediting_140994	chr1_224184695_+	ncRNA_intronic
CAediting_140995	chr1_224184699_+	ncRNA_intronic
CAediting_140996	chr1_224184701_+	ncRNA_intronic
CAediting_140997	chr1_224184713_+	ncRNA_intronic
CAediting_140998	chr1_224184716_+	ncRNA_intronic
CAediting_140999	chr1_224184750_+	ncRNA_intronic
CAediting_141000	chr1_224184778_+	ncRNA_intronic
CAediting_141001	chr1_224184790_+	ncRNA_intronic
CAediting_141002	chr1_224184792_+	ncRNA_intronic
CAediting_141003	chr1_224184800_+	ncRNA_intronic
CAediting_141004	chr1_224184866_+	ncRNA_intronic
CAediting_141005	chr1_224184871_+	ncRNA_intronic
CAediting_141006	chr1_224184879_+	ncRNA_intronic
CAediting_141007	chr1_224184880_+	ncRNA_intronic
CAediting_141008	chr1_224184885_+	ncRNA_intronic
CAediting_141009	chr1_224184896_+	ncRNA_intronic
CAediting_141010	chr1_224184902_+	ncRNA_intronic
CAediting_141011	chr1_224184928_+	ncRNA_intronic
CAediting_141012	chr1_224184953_+	ncRNA_intronic
CAediting_141013	chr1_224185131_+	ncRNA_intronic
CAediting_141014	chr1_224185175_+	ncRNA_intronic
CAediting_141015	chr1_224185229_+	ncRNA_intronic
CAediting_141016	chr1_224185275_+	ncRNA_intronic
CAediting_141017	chr1_224185354_+	ncRNA_intronic
CAediting_141018	chr1_224185355_+	ncRNA_intronic
CAediting_141019	chr1_224185521_+	ncRNA_intronic
CAediting_141020	chr1_224185539_+	ncRNA_intronic
CAediting_141021	chr1_224185574_+	ncRNA_intronic
CAediting_141022	chr1_224185579_+	ncRNA_intronic
CAediting_141023	chr1_224185580_+	ncRNA_intronic
CAediting_141024	chr1_224185599_+	ncRNA_intronic
CAediting_141025	chr1_224185600_+	ncRNA_intronic
CAediting_141026	chr1_224185603_+	ncRNA_intronic
CAediting_141027	chr1_224185618_+	ncRNA_intronic
CAediting_141028	chr1_224185627_+	ncRNA_intronic
CAediting_141029	chr1_224185630_+	ncRNA_intronic
CAediting_141030	chr1_224185640_+	ncRNA_intronic
CAediting_141031	chr1_224185642_+	ncRNA_intronic
CAediting_141032	chr1_224185688_+	ncRNA_intronic
CAediting_141033	chr1_224185691_+	ncRNA_intronic
CAediting_141034	chr1_224185697_+	ncRNA_intronic
CAediting_141035	chr1_224185710_+	ncRNA_intronic
CAediting_141036	chr1_224185728_+	ncRNA_intronic
CAediting_141037	chr1_224185755_+	ncRNA_intronic
CAediting_141038	chr1_224185756_+	ncRNA_intronic
CAediting_141039	chr1_224185945_+	ncRNA_intronic
CAediting_141040	chr1_224185946_+	ncRNA_intronic
CAediting_141041	chr1_224185960_+	ncRNA_intronic
CAediting_141042	chr1_224185963_+	ncRNA_intronic
CAediting_141043	chr1_224185968_+	ncRNA_intronic
CAediting_141044	chr1_224185973_+	ncRNA_intronic
CAediting_141045	chr1_224186061_+	ncRNA_intronic
CAediting_141046	chr1_224186064_+	ncRNA_intronic
CAediting_141047	chr1_224186070_+	ncRNA_intronic
CAediting_141048	chr1_224186089_+	ncRNA_intronic
CAediting_141049	chr1_224186093_+	ncRNA_intronic
CAediting_141050	chr1_224186108_+	ncRNA_intronic
CAediting_141051	chr1_224186117_+	ncRNA_intronic
CAediting_141052	chr1_224186125_+	ncRNA_intronic
CAediting_141053	chr1_224186126_+	ncRNA_intronic
CAediting_141054	chr1_224186177_+	ncRNA_intronic
CAediting_141055	chr1_224186193_+	ncRNA_intronic
CAediting_141056	chr1_224186201_+	ncRNA_intronic
CAediting_141057	chr1_224186210_+	ncRNA_intronic
CAediting_141058	chr1_224186228_+	ncRNA_intronic
CAediting_141059	chr1_224186253_+	ncRNA_intronic
CAediting_141060	chr1_224186458_+	ncRNA_intronic
CAediting_141061	chr1_224186459_+	ncRNA_intronic
CAediting_141062	chr1_224186481_+	ncRNA_intronic
CAediting_141063	chr1_224186494_+	ncRNA_intronic
CAediting_141064	chr1_224186526_+	ncRNA_intronic
CAediting_141065	chr1_224186550_+	ncRNA_intronic
CAediting_141066	chr1_224186566_+	ncRNA_intronic
CAediting_141067	chr1_224186582_+	ncRNA_intronic
CAediting_141068	chr1_224186586_+	ncRNA_intronic
CAediting_141069	chr1_224186592_+	ncRNA_intronic
CAediting_141070	chr1_224186602_+	ncRNA_intronic
CAediting_141071	chr1_224186619_+	ncRNA_intronic
CAediting_141072	chr1_224186625_+	ncRNA_intronic
CAediting_141073	chr1_224186633_+	ncRNA_intronic
CAediting_141074	chr1_224186634_+	ncRNA_intronic
CAediting_141075	chr1_224186695_+	ncRNA_intronic
CAediting_141076	chr1_224186697_+	ncRNA_intronic
CAediting_141077	chr1_224187053_+	ncRNA_intronic
CAediting_141078	chr1_224187083_+	ncRNA_intronic
CAediting_141079	chr1_224187088_+	ncRNA_intronic
CAediting_141080	chr1_224187093_+	ncRNA_intronic
CAediting_141081	chr1_224187106_+	ncRNA_intronic
CAediting_141082	chr1_224187143_+	ncRNA_intronic
CAediting_141083	chr1_224187148_+	ncRNA_intronic
CAediting_141084	chr1_224187156_+	ncRNA_intronic
CAediting_141085	chr1_224187187_+	ncRNA_intronic
CAediting_141086	chr1_224187188_+	ncRNA_intronic
CAediting_141087	chr1_224187204_+	ncRNA_intronic
CAediting_141088	chr1_224187210_+	ncRNA_intronic
CAediting_141089	chr1_224187214_+	ncRNA_intronic
CAediting_141090	chr1_224187220_+	ncRNA_intronic
CAediting_141091	chr1_224187290_+	ncRNA_intronic
CAediting_141092	chr1_224187396_+	ncRNA_intronic
CAediting_141093	chr1_224187398_+	ncRNA_intronic
CAediting_141094	chr1_224187459_+	ncRNA_intronic
CAediting_141095	chr1_224187484_+	ncRNA_intronic
CAediting_141096	chr1_224187488_+	ncRNA_intronic
CAediting_141097	chr1_224187498_+	ncRNA_intronic
CAediting_141098	chr1_224187511_+	ncRNA_intronic
CAediting_141099	chr1_224187516_+	ncRNA_intronic
CAediting_141100	chr1_224187524_+	ncRNA_intronic
CAediting_141101	chr1_224187525_+	ncRNA_intronic
CAediting_141102	chr1_224187543_+	ncRNA_intronic
CAediting_141103	chr1_224187564_+	ncRNA_intronic
CAediting_141104	chr1_224187589_+	ncRNA_intronic
CAediting_141105	chr1_224187593_+	ncRNA_intronic
CAediting_141106	chr1_224187617_+	ncRNA_intronic
CAediting_141107	chr1_224187628_+	ncRNA_intronic
CAediting_141108	chr1_224187984_+	ncRNA_intronic
CAediting_141109	chr1_224188087_+	ncRNA_intronic
CAediting_141110	chr1_224188111_+	ncRNA_intronic
CAediting_141111	chr1_224188119_+	ncRNA_intronic
CAediting_141112	chr1_224188150_+	ncRNA_intronic
CAediting_141113	chr1_224188164_+	ncRNA_intronic
CAediting_141114	chr1_224188173_+	ncRNA_intronic
CAediting_141115	chr1_224188234_+	ncRNA_intronic
CAediting_141116	chr1_224190377_+	ncRNA_intronic
CAediting_141117	chr1_224190389_+	ncRNA_intronic
CAediting_141118	chr1_224190419_+	ncRNA_intronic
CAediting_141119	chr1_224190432_+	ncRNA_intronic
CAediting_141120	chr1_224190457_+	ncRNA_intronic
CAediting_141121	chr1_224190459_+	ncRNA_intronic
CAediting_141122	chr1_224190462_+	ncRNA_intronic
CAediting_141123	chr1_224190468_+	ncRNA_intronic
CAediting_141124	chr1_224190475_+	ncRNA_intronic
CAediting_141125	chr1_224190484_+	ncRNA_intronic
CAediting_141126	chr1_224190487_+	ncRNA_intronic
CAediting_141127	chr1_224190497_+	ncRNA_intronic
CAediting_141128	chr1_224190499_+	ncRNA_intronic
CAediting_141129	chr1_224190519_+	ncRNA_intronic
CAediting_141130	chr1_224190523_+	ncRNA_intronic
CAediting_141131	chr1_224190541_+	ncRNA_intronic
CAediting_141132	chr1_224190543_+	ncRNA_intronic
CAediting_141133	chr1_224190745_+	ncRNA_intronic
CAediting_141134	chr1_224190751_+	ncRNA_intronic
CAediting_141135	chr1_224190767_+	ncRNA_intronic
CAediting_141136	chr1_224190822_+	ncRNA_intronic
CAediting_141137	chr1_224190823_+	ncRNA_intronic
CAediting_141138	chr1_224190835_+	ncRNA_intronic
CAediting_141139	chr1_224190852_+	ncRNA_intronic
CAediting_141140	chr1_224190862_+	ncRNA_intronic
CAediting_141141	chr1_224190864_+	ncRNA_intronic
CAediting_141142	chr1_224190878_+	ncRNA_intronic
CAediting_141143	chr1_224190896_+	ncRNA_intronic
CAediting_141144	chr1_224190942_+	ncRNA_intronic
CAediting_141145	chr1_224190957_+	ncRNA_intronic
CAediting_141146	chr1_224190974_+	ncRNA_intronic
CAediting_141147	chr1_224190990_+	ncRNA_intronic
CAediting_141148	chr1_224191116_+	ncRNA_exonic
CAediting_141149	chr1_224191132_+	ncRNA_exonic
CAediting_141150	chr1_224191133_+	ncRNA_exonic
CAediting_141151	chr1_224191138_+	ncRNA_exonic
CAediting_141152	chr1_224191155_+	ncRNA_exonic
CAediting_141153	chr1_224191173_+	ncRNA_intronic
CAediting_141154	chr1_224191178_+	ncRNA_intronic
CAediting_141155	chr1_224191202_+	ncRNA_intronic
CAediting_141156	chr1_224191204_+	ncRNA_intronic
CAediting_141157	chr1_224191206_+	ncRNA_intronic
CAediting_141158	chr1_224191212_+	ncRNA_intronic
CAediting_141159	chr1_224191223_+	ncRNA_intronic
CAediting_141160	chr1_224191226_+	ncRNA_intronic
CAediting_141161	chr1_224191228_+	ncRNA_intronic
CAediting_141162	chr1_224191229_+	ncRNA_intronic
CAediting_141163	chr1_224191230_+	ncRNA_intronic
CAediting_141164	chr1_224191232_+	ncRNA_intronic
CAediting_141165	chr1_224191238_+	ncRNA_intronic
CAediting_141166	chr1_224191243_+	ncRNA_intronic
CAediting_141167	chr1_224191251_+	ncRNA_intronic
CAediting_141168	chr1_224191263_+	ncRNA_intronic
CAediting_141169	chr1_224191267_+	ncRNA_intronic
CAediting_141170	chr1_224191269_+	ncRNA_intronic
CAediting_141171	chr1_224191275_+	ncRNA_intronic
CAediting_141172	chr1_224191279_+	ncRNA_intronic
CAediting_141173	chr1_224191302_+	ncRNA_intronic
CAediting_141174	chr1_224191311_+	ncRNA_intronic
CAediting_141175	chr1_224191431_+	ncRNA_intronic
CAediting_141176	chr1_224191442_+	ncRNA_intronic
CAediting_141177	chr1_224191443_+	ncRNA_intronic
CAediting_141178	chr1_224191659_+	ncRNA_intronic
CAediting_141179	chr1_224191695_+	ncRNA_intronic
CAediting_141180	chr1_224191698_+	ncRNA_intronic
CAediting_141181	chr1_224191699_+	ncRNA_intronic
CAediting_141182	chr1_224191734_+	ncRNA_intronic
CAediting_141183	chr1_224191736_+	ncRNA_intronic
CAediting_141184	chr1_224191760_+	ncRNA_intronic
CAediting_141185	chr1_224191777_+	ncRNA_intronic
CAediting_141186	chr1_224191780_+	ncRNA_intronic
CAediting_141187	chr1_224191858_+	ncRNA_intronic
CAediting_141188	chr1_224191859_+	ncRNA_intronic
CAediting_141189	chr1_224191871_+	ncRNA_intronic
CAediting_141190	chr1_224191873_+	ncRNA_intronic
CAediting_141191	chr1_224191877_+	ncRNA_intronic
CAediting_141192	chr1_224192790_+	UTR3
CAediting_141193	chr1_224192798_+	UTR3
CAediting_141194	chr1_224192799_+	UTR3
CAediting_141195	chr1_224192834_+	UTR3
CAediting_141196	chr1_224192844_+	UTR3
CAediting_141197	chr1_224192889_+	UTR3
CAediting_141198	chr1_224192892_+	UTR3
CAediting_141199	chr1_224192893_+	UTR3
CAediting_141200	chr1_224192894_+	splicing
CAediting_141201	chr1_224192933_+	UTR3
CAediting_141202	chr1_224193005_+	UTR3
CAediting_141203	chr1_224193009_+	UTR3
CAediting_141204	chr1_224193010_+	UTR3
CAediting_141205	chr1_224193012_+	UTR3
CAediting_141206	chr1_224193055_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_140984	chr1_224184543_+	SINE	Alu	AluSx1
CAediting_140985	chr1_224184567_+	SINE	Alu	AluSx1
CAediting_140986	chr1_224184576_+	SINE	Alu	AluSx1
CAediting_140987	chr1_224184592_+	SINE	Alu	AluSx1
CAediting_140988	chr1_224184611_+	SINE	Alu	AluSx1
CAediting_140989	chr1_224184612_+	SINE	Alu	AluSx1
CAediting_140990	chr1_224184629_+	SINE	Alu	AluSx1
CAediting_140991	chr1_224184651_+	SINE	Alu	AluSx1
CAediting_140992	chr1_224184661_+	SINE	Alu	AluSx1
CAediting_140993	chr1_224184678_+	SINE	Alu	AluSx1
CAediting_140994	chr1_224184695_+	SINE	Alu	AluSx1
CAediting_140995	chr1_224184699_+	SINE	Alu	AluSx1
CAediting_140996	chr1_224184701_+	SINE	Alu	AluSx1
CAediting_140997	chr1_224184713_+	SINE	Alu	AluSx1
CAediting_140998	chr1_224184716_+	SINE	Alu	AluSx1
CAediting_140999	chr1_224184750_+	SINE	Alu	AluSx1
CAediting_141000	chr1_224184778_+	SINE	Alu	AluSx1
CAediting_141001	chr1_224184790_+	SINE	Alu	AluSx1
CAediting_141002	chr1_224184792_+	SINE	Alu	AluSx1
CAediting_141003	chr1_224184800_+	SINE	Alu	AluSx1
CAediting_141004	chr1_224184866_+	SINE	Alu	AluJo
CAediting_141005	chr1_224184871_+	SINE	Alu	AluJo
CAediting_141006	chr1_224184879_+	SINE	Alu	AluJo
CAediting_141007	chr1_224184880_+	SINE	Alu	AluJo
CAediting_141008	chr1_224184885_+	SINE	Alu	AluJo
CAediting_141009	chr1_224184896_+	SINE	Alu	AluJo
CAediting_141010	chr1_224184902_+	SINE	Alu	AluJo
CAediting_141011	chr1_224184928_+	SINE	Alu	AluJo
CAediting_141012	chr1_224184953_+	SINE	Alu	AluJo
CAediting_141013	chr1_224185131_+	SINE	Alu	AluJb
CAediting_141014	chr1_224185175_+	SINE	Alu	AluJb
CAediting_141015	chr1_224185229_+	SINE	Alu	AluJb
CAediting_141016	chr1_224185275_+	SINE	Alu	AluJb
CAediting_141017	chr1_224185354_+	SINE	Alu	FAM
CAediting_141018	chr1_224185355_+	SINE	Alu	FAM
CAediting_141019	chr1_224185521_+	SINE	Alu	AluSx1
CAediting_141020	chr1_224185539_+	SINE	Alu	AluSx1
CAediting_141021	chr1_224185574_+	SINE	Alu	AluSx1
CAediting_141022	chr1_224185579_+	SINE	Alu	AluSx1
CAediting_141023	chr1_224185580_+	SINE	Alu	AluSx1
CAediting_141024	chr1_224185599_+	SINE	Alu	AluSx1
CAediting_141025	chr1_224185600_+	SINE	Alu	AluSx1
CAediting_141026	chr1_224185603_+	SINE	Alu	AluSx1
CAediting_141027	chr1_224185618_+	SINE	Alu	AluSx1
CAediting_141028	chr1_224185627_+	SINE	Alu	AluSx1
CAediting_141029	chr1_224185630_+	SINE	Alu	AluSx1
CAediting_141030	chr1_224185640_+	SINE	Alu	AluSx1
CAediting_141031	chr1_224185642_+	SINE	Alu	AluSx1
CAediting_141032	chr1_224185688_+	SINE	Alu	AluSx1
CAediting_141033	chr1_224185691_+	SINE	Alu	AluSx1
CAediting_141034	chr1_224185697_+	SINE	Alu	AluSx1
CAediting_141035	chr1_224185710_+	SINE	Alu	AluSx1
CAediting_141036	chr1_224185728_+	SINE	Alu	AluSx1
CAediting_141037	chr1_224185755_+	SINE	Alu	AluSx1
CAediting_141038	chr1_224185756_+	SINE	Alu	AluSx1
CAediting_141039	chr1_224185945_+	SINE	Alu	AluJr4
CAediting_141040	chr1_224185946_+	SINE	Alu	AluJr4
CAediting_141041	chr1_224185960_+	SINE	Alu	AluJr4
CAediting_141042	chr1_224185963_+	SINE	Alu	AluJr4
CAediting_141043	chr1_224185968_+	SINE	Alu	AluJr4
CAediting_141044	chr1_224185973_+	SINE	Alu	AluJr4
CAediting_141045	chr1_224186061_+	SINE	Alu	AluJb
CAediting_141046	chr1_224186064_+	SINE	Alu	AluJb
CAediting_141047	chr1_224186070_+	SINE	Alu	AluJb
CAediting_141048	chr1_224186089_+	SINE	Alu	AluJb
CAediting_141049	chr1_224186093_+	SINE	Alu	AluJb
CAediting_141050	chr1_224186108_+	SINE	Alu	AluJb
CAediting_141051	chr1_224186117_+	SINE	Alu	AluJb
CAediting_141052	chr1_224186125_+	SINE	Alu	AluJb
CAediting_141053	chr1_224186126_+	SINE	Alu	AluJb
CAediting_141054	chr1_224186177_+	SINE	Alu	AluJb
CAediting_141055	chr1_224186193_+	SINE	Alu	AluJb
CAediting_141056	chr1_224186201_+	SINE	Alu	AluJb
CAediting_141057	chr1_224186210_+	SINE	Alu	AluJb
CAediting_141058	chr1_224186228_+	SINE	Alu	AluJb
CAediting_141059	chr1_224186253_+	SINE	Alu	AluJb
CAediting_141060	chr1_224186458_+	SINE	Alu	AluY
CAediting_141061	chr1_224186459_+	SINE	Alu	AluY
CAediting_141062	chr1_224186481_+	SINE	Alu	AluY
CAediting_141063	chr1_224186494_+	SINE	Alu	AluY
CAediting_141064	chr1_224186526_+	SINE	Alu	AluY
CAediting_141065	chr1_224186550_+	SINE	Alu	AluY
CAediting_141066	chr1_224186566_+	SINE	Alu	AluY
CAediting_141067	chr1_224186582_+	SINE	Alu	AluY
CAediting_141068	chr1_224186586_+	SINE	Alu	AluY
CAediting_141069	chr1_224186592_+	SINE	Alu	AluY
CAediting_141070	chr1_224186602_+	SINE	Alu	AluY
CAediting_141071	chr1_224186619_+	SINE	Alu	AluY
CAediting_141072	chr1_224186625_+	SINE	Alu	AluY
CAediting_141073	chr1_224186633_+	SINE	Alu	AluY
CAediting_141074	chr1_224186634_+	SINE	Alu	AluY
CAediting_141075	chr1_224186695_+	SINE	Alu	AluY
CAediting_141076	chr1_224186697_+	SINE	Alu	AluY
CAediting_141077	chr1_224187053_+	SINE	Alu	AluSx1
CAediting_141078	chr1_224187083_+	SINE	Alu	AluSx1
CAediting_141079	chr1_224187088_+	SINE	Alu	AluSx1
CAediting_141080	chr1_224187093_+	SINE	Alu	AluSx1
CAediting_141081	chr1_224187106_+	SINE	Alu	AluSx1
CAediting_141082	chr1_224187143_+	SINE	Alu	AluSx1
CAediting_141083	chr1_224187148_+	SINE	Alu	AluSx1
CAediting_141084	chr1_224187156_+	SINE	Alu	AluSx1
CAediting_141085	chr1_224187187_+	SINE	Alu	AluSx1
CAediting_141086	chr1_224187188_+	SINE	Alu	AluSx1
CAediting_141087	chr1_224187204_+	SINE	Alu	AluSx1
CAediting_141088	chr1_224187210_+	SINE	Alu	AluSx1
CAediting_141089	chr1_224187214_+	SINE	Alu	AluSx1
CAediting_141090	chr1_224187220_+	SINE	Alu	AluSx1
CAediting_141091	chr1_224187290_+	SINE	Alu	AluSx1
CAediting_141092	chr1_224187396_+	SINE	Alu	AluJr
CAediting_141093	chr1_224187398_+	SINE	Alu	AluJr
CAediting_141094	chr1_224187459_+	SINE	Alu	AluJr
CAediting_141095	chr1_224187484_+	SINE	Alu	AluJr
CAediting_141096	chr1_224187488_+	SINE	Alu	AluJr
CAediting_141097	chr1_224187498_+	SINE	Alu	AluJr
CAediting_141098	chr1_224187511_+	SINE	Alu	AluJr
CAediting_141099	chr1_224187516_+	SINE	Alu	AluJr
CAediting_141100	chr1_224187524_+	SINE	Alu	AluJr
CAediting_141101	chr1_224187525_+	SINE	Alu	AluJr
CAediting_141102	chr1_224187543_+	SINE	Alu	AluJr
CAediting_141103	chr1_224187564_+	SINE	Alu	AluJr
CAediting_141104	chr1_224187589_+	SINE	Alu	AluJr
CAediting_141105	chr1_224187593_+	SINE	Alu	AluJr
CAediting_141106	chr1_224187617_+	SINE	Alu	AluJr
CAediting_141107	chr1_224187628_+	SINE	Alu	AluJr
CAediting_141108	chr1_224187984_+	SINE	Alu	FLAM_C
CAediting_141109	chr1_224188087_+	SINE	Alu	FLAM_C
CAediting_141111	chr1_224188119_+	SINE	Alu	AluJo
CAediting_141112	chr1_224188150_+	SINE	Alu	AluJo
CAediting_141113	chr1_224188164_+	SINE	Alu	AluJo
CAediting_141114	chr1_224188173_+	SINE	Alu	AluJo
CAediting_141115	chr1_224188234_+	SINE	Alu	AluJo
CAediting_141116	chr1_224190377_+	SINE	Alu	AluSz6
CAediting_141117	chr1_224190389_+	SINE	Alu	AluSz6
CAediting_141118	chr1_224190419_+	SINE	Alu	AluSz6
CAediting_141119	chr1_224190432_+	SINE	Alu	AluSz6
CAediting_141120	chr1_224190457_+	SINE	Alu	AluSz6
CAediting_141121	chr1_224190459_+	SINE	Alu	AluSz6
CAediting_141122	chr1_224190462_+	SINE	Alu	AluSz6
CAediting_141123	chr1_224190468_+	SINE	Alu	AluSz6
CAediting_141124	chr1_224190475_+	SINE	Alu	AluSz6
CAediting_141125	chr1_224190484_+	SINE	Alu	AluSz6
CAediting_141126	chr1_224190487_+	SINE	Alu	AluSz6
CAediting_141127	chr1_224190497_+	SINE	Alu	AluSz6
CAediting_141128	chr1_224190499_+	SINE	Alu	AluSz6
CAediting_141129	chr1_224190519_+	SINE	Alu	AluSz6
CAediting_141130	chr1_224190523_+	SINE	Alu	AluSz6
CAediting_141131	chr1_224190541_+	SINE	Alu	AluSz6
CAediting_141132	chr1_224190543_+	SINE	Alu	AluSz6
CAediting_141133	chr1_224190745_+	SINE	Alu	AluJr
CAediting_141134	chr1_224190751_+	SINE	Alu	AluJr
CAediting_141135	chr1_224190767_+	SINE	Alu	AluJr
CAediting_141136	chr1_224190822_+	SINE	Alu	AluJr
CAediting_141137	chr1_224190823_+	SINE	Alu	AluJr
CAediting_141138	chr1_224190835_+	SINE	Alu	AluJr
CAediting_141139	chr1_224190852_+	SINE	Alu	AluJr
CAediting_141140	chr1_224190862_+	SINE	Alu	AluJr
CAediting_141141	chr1_224190864_+	SINE	Alu	AluJr
CAediting_141142	chr1_224190878_+	SINE	Alu	AluJr
CAediting_141143	chr1_224190896_+	SINE	Alu	AluJr
CAediting_141144	chr1_224190942_+	SINE	Alu	AluJr
CAediting_141145	chr1_224190957_+	SINE	Alu	AluJr
CAediting_141146	chr1_224190974_+	SINE	Alu	AluJr
CAediting_141147	chr1_224190990_+	SINE	Alu	AluJr
CAediting_141148	chr1_224191116_+	SINE	Alu	AluSx1
CAediting_141149	chr1_224191132_+	SINE	Alu	AluSx1
CAediting_141150	chr1_224191133_+	SINE	Alu	AluSx1
CAediting_141151	chr1_224191138_+	SINE	Alu	AluSx1
CAediting_141152	chr1_224191155_+	SINE	Alu	AluSx1
CAediting_141153	chr1_224191173_+	SINE	Alu	AluSx1
CAediting_141154	chr1_224191178_+	SINE	Alu	AluSx1
CAediting_141155	chr1_224191202_+	SINE	Alu	AluSx1
CAediting_141156	chr1_224191204_+	SINE	Alu	AluSx1
CAediting_141157	chr1_224191206_+	SINE	Alu	AluSx1
CAediting_141158	chr1_224191212_+	SINE	Alu	AluSx1
CAediting_141159	chr1_224191223_+	SINE	Alu	AluSx1
CAediting_141160	chr1_224191226_+	SINE	Alu	AluSx1
CAediting_141161	chr1_224191228_+	SINE	Alu	AluSx1
CAediting_141162	chr1_224191229_+	SINE	Alu	AluSx1
CAediting_141163	chr1_224191230_+	SINE	Alu	AluSx1
CAediting_141164	chr1_224191232_+	SINE	Alu	AluSx1
CAediting_141165	chr1_224191238_+	SINE	Alu	AluSx1
CAediting_141166	chr1_224191243_+	SINE	Alu	AluSx1
CAediting_141167	chr1_224191251_+	SINE	Alu	AluSx1
CAediting_141168	chr1_224191263_+	SINE	Alu	AluSx1
CAediting_141169	chr1_224191267_+	SINE	Alu	AluSx1
CAediting_141170	chr1_224191269_+	SINE	Alu	AluSx1
CAediting_141171	chr1_224191275_+	SINE	Alu	AluSx1
CAediting_141172	chr1_224191279_+	SINE	Alu	AluSx1
CAediting_141173	chr1_224191302_+	SINE	Alu	AluSx1
CAediting_141174	chr1_224191311_+	SINE	Alu	AluSx1
CAediting_141175	chr1_224191431_+	SINE	Alu	AluJb
CAediting_141176	chr1_224191442_+	SINE	Alu	AluJb
CAediting_141177	chr1_224191443_+	SINE	Alu	AluJb
CAediting_141178	chr1_224191659_+	SINE	Alu	AluSx
CAediting_141179	chr1_224191695_+	SINE	Alu	AluSx
CAediting_141180	chr1_224191698_+	SINE	Alu	AluSx
CAediting_141181	chr1_224191699_+	SINE	Alu	AluSx
CAediting_141182	chr1_224191734_+	SINE	Alu	AluSx
CAediting_141183	chr1_224191736_+	SINE	Alu	AluSx
CAediting_141184	chr1_224191760_+	SINE	Alu	AluSx
CAediting_141185	chr1_224191777_+	SINE	Alu	AluSx
CAediting_141186	chr1_224191780_+	SINE	Alu	AluSx
CAediting_141187	chr1_224191858_+	SINE	Alu	AluSx
CAediting_141188	chr1_224191859_+	SINE	Alu	AluSx
CAediting_141189	chr1_224191871_+	SINE	Alu	AluSx
CAediting_141190	chr1_224191873_+	SINE	Alu	AluSx
CAediting_141191	chr1_224191877_+	SINE	Alu	AluSx
CAediting_141192	chr1_224192790_+	SINE	Alu	AluSx
CAediting_141193	chr1_224192798_+	SINE	Alu	AluSx
CAediting_141194	chr1_224192799_+	SINE	Alu	AluSx
CAediting_141195	chr1_224192834_+	SINE	Alu	AluSx
CAediting_141196	chr1_224192844_+	SINE	Alu	AluSx
CAediting_141197	chr1_224192889_+	SINE	Alu	AluSx
CAediting_141198	chr1_224192892_+	SINE	Alu	AluSx
CAediting_141199	chr1_224192893_+	SINE	Alu	AluSx
CAediting_141200	chr1_224192894_+	SINE	Alu	AluSx
CAediting_141201	chr1_224192933_+	SINE	Alu	AluSx
CAediting_141202	chr1_224193005_+	SINE	Alu	AluSx
CAediting_141203	chr1_224193009_+	SINE	Alu	AluSx
CAediting_141204	chr1_224193010_+	SINE	Alu	AluSx
CAediting_141205	chr1_224193012_+	SINE	Alu	AluSx
CAediting_141206	chr1_224193055_+	SINE	Alu	AluSx

Top

RNA A-to-I editing events in the alternative splicing sites for DEGS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_141062	chr1_224186481_+	224186480:224186488	5SS	2+0i	AAGGTGGGC	7.93	AGGGTGGGC	4.44
ES	CAediting_141152	chr1_224191155_+	224191154:224191162	5SS	2+0i	TAGGTGAGT	8.83	TGGGTGAGT	8.73
MEX_2	CAediting_141152	chr1_224191155_+	224191154:224191162	5SS	2+0i	TAGGTGAGT	8.83	TGGGTGAGT	8.73
IR	CAediting_141197	chr1_224192889_+	224192875:224192897	3SS	0+6i	GAAACCCCATCTCTACTAAAAAT	-6.62	GAAACCCCATCTCTGCTAAAAAT	-7.14
IR	CAediting_141198	chr1_224192892_+	224192875:224192897	3SS	0+3i	GAAACCCCATCTCTACTAAAAAT	-6.62	GAAACCCCATCTCTACTGAAAAT	-14.44
IR	CAediting_141199	chr1_224192893_+	224192875:224192897	3SS	0+2i	GAAACCCCATCTCTACTAAAAAT	-6.62	GAAACCCCATCTCTACTAGAAAT	-14.57
IR	CAediting_141200	chr1_224192894_+	224192875:224192897	3SS	0+1i	GAAACCCCATCTCTACTAAAAAT	-6.62	GAAACCCCATCTCTACTAAGAAT	2.13

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000143753.11.DEGS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000143753.11.DEGS1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for DEGS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for DEGS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for DEGS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_141192	chr1_224192790_+	ENSG00000143753.11	ENST00000323699	hsa-miR-3622a-5p	224192788	224192795	8mer-1a	224192776	224192795	149.00	-21.14
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000323699	hsa-miR-513a-5p	224192927	224192933	7mer-m8	224192917	224192934	160.00	-19.44
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000323699	hsa-miR-513a-5p	224192927	224192933	7mer-m8	224192917	224192934	160.00	-19.44
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000323699	hsa-miR-638	224192932	224192938	7mer-1a	224192914	224192938	167.00	-37.64
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000391877	hsa-miR-513a-5p	224192927	224192933	7mer-m8	224192917	224192934	160.00	-19.44
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000391877	hsa-miR-513a-5p	224192927	224192933	7mer-m8	224192917	224192934	160.00	-19.44
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000391877	hsa-miR-638	224192932	224192938	7mer-1a	224192914	224192938	167.00	-37.64
CAediting_141204	chr1_224193010_+	ENSG00000143753.11	ENST00000323699	hsa-miR-1343-3p	224193005	224193011	7mer-m8	224192990	224193012	163.00	-23.04
CAediting_141204	chr1_224193010_+	ENSG00000143753.11	ENST00000323699	hsa-miR-6742-3p	224193004	224193011	8mer-1a	224192989	224193011	153.00	-22.97
CAediting_141204	chr1_224193010_+	ENSG00000143753.11	ENST00000323699	hsa-miR-6783-3p	224193005	224193011	7mer-m8	224192987	224193012	155.00	-25.81
CAediting_141204	chr1_224193010_+	ENSG00000143753.11	ENST00000391877	hsa-miR-1343-3p	224193005	224193011	7mer-m8	224192990	224193012	163.00	-23.04
CAediting_141204	chr1_224193010_+	ENSG00000143753.11	ENST00000391877	hsa-miR-6742-3p	224193004	224193011	8mer-1a	224192989	224193011	153.00	-22.97
CAediting_141204	chr1_224193010_+	ENSG00000143753.11	ENST00000391877	hsa-miR-6783-3p	224193005	224193011	7mer-m8	224192987	224193012	155.00	-25.81
CAediting_141205	chr1_224193012_+	ENSG00000143753.11	ENST00000323699	hsa-miR-3189-3p	224193005	224193011	7mer-m8	224192993	224193012	153.00	-22.25
CAediting_141205	chr1_224193012_+	ENSG00000143753.11	ENST00000323699	hsa-miR-6813-3p	224193006	224193012	7mer-m8	224192992	224193013	142.00	-16.14
CAediting_141205	chr1_224193012_+	ENSG00000143753.11	ENST00000391877	hsa-miR-3189-3p	224193005	224193011	7mer-m8	224192993	224193012	153.00	-22.25
CAediting_141205	chr1_224193012_+	ENSG00000143753.11	ENST00000391877	hsa-miR-6813-3p	224193006	224193012	7mer-m8	224192992	224193013	142.00	-16.14
CAediting_141206	chr1_224193055_+	ENSG00000143753.11	ENST00000323699	hsa-miR-483-5p	224193051	224193057	7mer-m8	224193037	224193058	140.00	-14.01
CAediting_141206	chr1_224193055_+	ENSG00000143753.11	ENST00000391877	hsa-miR-483-5p	224193051	224193057	7mer-m8	224193037	224193058	140.00	-14.01
CAediting_141193	chr1_224192798_+	ENSG00000143753.11	ENST00000323699	hsa-miR-638	224192797	224192803	7mer-1a	224192779	224192803	147.00	-29.24
CAediting_141194	chr1_224192799_+	ENSG00000143753.11	ENST00000323699	hsa-miR-625-3p	224192793	224192799	7mer-m8	224192779	224192800	140.00	-14.38
CAediting_141194	chr1_224192799_+	ENSG00000143753.11	ENST00000323699	hsa-miR-8052	224192797	224192803	7mer-1a	224192785	224192803	152.00	-29.37
CAediting_141197	chr1_224192889_+	ENSG00000143753.11	ENST00000323699	hsa-miR-374b-3p	224192886	224192893	8mer-1a	224192871	224192893	151.00	-12.20
CAediting_141197	chr1_224192889_+	ENSG00000143753.11	ENST00000323699	hsa-miR-4756-3p	224192882	224192888	7mer-m8	224192870	224192889	151.00	-16.61
CAediting_141198	chr1_224192892_+	ENSG00000143753.11	ENST00000323699	hsa-miR-222-5p	224192886	224192893	8mer-1a	224192873	224192893	141.00	-9.81
CAediting_141198	chr1_224192892_+	ENSG00000143753.11	ENST00000323699	hsa-miR-30a-3p	224192888	224192895	8mer-1a	224192871	224192895	154.00	-11.94
CAediting_141198	chr1_224192892_+	ENSG00000143753.11	ENST00000323699	hsa-miR-30d-3p	224192888	224192895	8mer-1a	224192873	224192895	153.00	-12.10
CAediting_141198	chr1_224192892_+	ENSG00000143753.11	ENST00000323699	hsa-miR-30e-3p	224192888	224192895	8mer-1a	224192871	224192895	154.00	-14.00
CAediting_141198	chr1_224192892_+	ENSG00000143753.11	ENST00000323699	hsa-miR-936	224192885	224192892	8mer-1a	224192870	224192892	159.00	-22.75
CAediting_141199	chr1_224192893_+	ENSG00000143753.11	ENST00000323699	hsa-miR-325	224192886	224192893	8mer-1a	224192871	224192893	145.00	-11.15
CAediting_141202	chr1_224193005_+	ENSG00000143753.11	ENST00000323699	hsa-miR-324-3p	224192998	224193004	7mer-m8	224192983	224193005	149.00	-22.75
CAediting_141202	chr1_224193005_+	ENSG00000143753.11	ENST00000323699	hsa-miR-4252	224192999	224193005	7mer-m8	224192987	224193006	147.00	-23.44
CAediting_141202	chr1_224193005_+	ENSG00000143753.11	ENST00000391877	hsa-miR-324-3p	224192998	224193004	7mer-m8	224192983	224193005	149.00	-22.75
CAediting_141202	chr1_224193005_+	ENSG00000143753.11	ENST00000391877	hsa-miR-4252	224192999	224193005	7mer-m8	224192987	224193006	147.00	-23.44

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000323699	hsa-miR-10399-5p	224192928	224192934	7mer-m8	224192914	224192935	147	-10.84
CAediting_141195	chr1_224192834_+	ENSG00000143753.11	ENST00000323699	hsa-miR-125a-3p	224192831	224192838	8mer-1a	224192817	224192838	140	-18.66
CAediting_141199	chr1_224192893_+	ENSG00000143753.11	ENST00000323699	hsa-miR-153-5p	224192891	224192897	7mer-m8	224192876	224192898	148	-8.16
CAediting_141200	chr1_224192894_+	ENSG00000143753.11	ENST00000323699	hsa-miR-153-5p	224192891	224192897	7mer-m8	224192876	224192898	148	-8.16
CAediting_141206	chr1_224193055_+	ENSG00000143753.11	ENST00000323699	hsa-miR-4708-5p	224193053	224193059	7mer-1a	224193039	224193059	142	-19.46
CAediting_141194	chr1_224192799_+	ENSG00000143753.11	ENST00000323699	hsa-miR-5089-5p	224192797	224192803	7mer-m8	224192782	224192804	144	-13.6
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000323699	hsa-miR-6504-3p	224192928	224192934	7mer-m8	224192911	224192935	143	-13.68
CAediting_141192	chr1_224192790_+	ENSG00000143753.11	ENST00000323699	hsa-miR-6807-5p	224192783	224192789	7mer-m8	224192768	224192790	155	-25.07
CAediting_141197	chr1_224192889_+	ENSG00000143753.11	ENST00000323699	hsa-miR-6832-5p	224192883	224192889	7mer-m8	224192868	224192890	142	-15.43
CAediting_141206	chr1_224193055_+	ENSG00000143753.11	ENST00000323699	hsa-miR-6890-5p	224193049	224193055	7mer-m8	224193036	224193056	142	-14.77
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000323699	hsa-miR-7151-3p	224192926	224192933	8mer-1a	224192917	224192933	142	-14.65
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000391877	hsa-miR-10399-5p	224192928	224192934	7mer-m8	224192914	224192935	147	-10.84
CAediting_141206	chr1_224193055_+	ENSG00000143753.11	ENST00000391877	hsa-miR-4708-5p	224193053	224193059	7mer-1a	224193039	224193059	142	-19.46
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000391877	hsa-miR-6504-3p	224192928	224192934	7mer-m8	224192911	224192935	143	-13.68
CAediting_141206	chr1_224193055_+	ENSG00000143753.11	ENST00000391877	hsa-miR-6890-5p	224193049	224193055	7mer-m8	224193036	224193056	142	-14.77
CAediting_141201	chr1_224192933_+	ENSG00000143753.11	ENST00000391877	hsa-miR-7151-3p	224192926	224192933	8mer-1a	224192917	224192933	142	-14.65

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000143753.11	ENST00000323699	hsa-miR-548aa	224192624	224192630	7mer-m8	224192607	224192631	171	-16.63
CAediting_86358	chr1_109598906_+	ENSG00000143753.11	ENST00000323699	hsa-miR-197-5p	224193026	224193032	7mer-m8	224193013	224193033	166	-31.05
CAediting_442554	chr5_154685830_+	ENSG00000143753.11	ENST00000323699	hsa-miR-1303	224192503	224192510	8mer-1a	224192489	224192510	153	-19.31
CAediting_442554	chr5_154685830_+	ENSG00000143753.11	ENST00000391877	hsa-miR-1303	224192503	224192510	8mer-1a	224192489	224192510	153	-19.31
CAediting_86358	chr1_109598906_+	ENSG00000143753.11	ENST00000391877	hsa-miR-197-5p	224193026	224193032	7mer-m8	224193013	224193033	166	-31.05

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for DEGS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000323699.7	protein_coding
ENST00000391877.3	protein_coding
ENST00000498813.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_141192	ENST00000323699.7	chr1_224192790_+	-622.80	-619.90	-625.50
CAediting_141193	ENST00000323699.7	chr1_224192798_+	-619.90	-619.90	-625.50
CAediting_141194	ENST00000323699.7	chr1_224192799_+	-619.90	-619.90	-625.50
CAediting_141195	ENST00000323699.7	chr1_224192834_+	-619.50	-619.90	-625.50
CAediting_141196	ENST00000323699.7	chr1_224192844_+	-619.20	-619.90	-625.50
CAediting_141197	ENST00000323699.7	chr1_224192889_+	-622.80	-619.90	-625.50
CAediting_141198	ENST00000323699.7	chr1_224192892_+	-620.60	-619.90	-625.50
CAediting_141199	ENST00000323699.7	chr1_224192893_+	-623.60	-619.90	-625.50
CAediting_141200	ENST00000323699.7	chr1_224192894_+	-620.30	-619.90	-625.50
CAediting_141201	ENST00000323699.7	chr1_224192933_+	-619.90	-619.90	-625.50
CAediting_141202	ENST00000323699.7	chr1_224193005_+	-619.90	-619.90	-625.50
CAediting_141203	ENST00000323699.7	chr1_224193009_+	-619.90	-619.90	-625.50
CAediting_141204	ENST00000323699.7	chr1_224193010_+	-619.90	-619.90	-625.50
CAediting_141205	ENST00000323699.7	chr1_224193012_+	-617.80	-619.90	-625.50
CAediting_141206	ENST00000323699.7	chr1_224193055_+	-616.80	-619.90	-625.50
CAediting_141201	ENST00000391877.3	chr1_224192933_+	-390.90	-390.90	-390.10
CAediting_141202	ENST00000391877.3	chr1_224193005_+	-390.90	-390.90	-390.10
CAediting_141203	ENST00000391877.3	chr1_224193009_+	-390.90	-390.90	-390.10
CAediting_141204	ENST00000391877.3	chr1_224193010_+	-390.90	-390.90	-390.10
CAediting_141205	ENST00000391877.3	chr1_224193012_+	-388.80	-390.90	-390.10
CAediting_141206	ENST00000391877.3	chr1_224193055_+	-387.50	-390.90	-390.10
CAediting_141148	ENST00000498813.1	chr1_224191116_+	-89.40	-86.80	-89.20
CAediting_141149	ENST00000498813.1	chr1_224191132_+	-87.60	-86.80	-89.20
CAediting_141150	ENST00000498813.1	chr1_224191133_+	-86.80	-86.80	-89.20
CAediting_141151	ENST00000498813.1	chr1_224191138_+	-86.00	-86.80	-89.20
CAediting_141152	ENST00000498813.1	chr1_224191155_+	-85.60	-86.80	-89.20

Top

Relation with ADAR for DEGS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for DEGS1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for DEGS1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for DEGS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for DEGS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
DEGS1	C0033578	Prostatic Neoplasms	1	CTD_human
DEGS1	C0036572	Seizures	1	GENOMICS_ENGLAND
DEGS1	C0376358	Malignant neoplasm of prostate	1	CTD_human
DEGS1	C0424605	Developmental delay (disorder)	1	GENOMICS_ENGLAND
DEGS1	C0557874	Global developmental delay	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene