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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: REPS1 (CAeditome ID:85021)

Gene summary for REPS1

check button Gene summary
Gene informationGene symbol

REPS1

Gene ID

85021

Gene nameRALBP1 associated Eps domain containing 1
SynonymsNBIA7|RALBP1
Cytomap

6q24.1

Type of geneprotein-coding
DescriptionralBP1-associated Eps domain-containing protein 1ralBP1-interacting protein 1
Modification date20210518
UniProtAcc

Q96D71

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
REPS1

GO:0005886

RalBP1-associated Eps domain-containing protein 1

20946875

REPS1

GO:0005905

RalBP1-associated Eps domain-containing protein 1

20946875


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RNA A-to-I events for REPS1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000135597.17

check button RNA A-to-I editing events in Cancer.
CAediting_506924(138907253, -), CAediting_506925(138909804, -), CAediting_506926(138910364, -), CAediting_506927(138915521, -), CAediting_506928(138915525, -), CAediting_506929(138915538, -), CAediting_506930(138915541, -), CAediting_506931(138915549, -), CAediting_506932(138915568, -), CAediting_506933(138915581, -), CAediting_506934(138915585, -), CAediting_506935(138915705, -), CAediting_506936(138916310, -), CAediting_506937(138916458, -), CAediting_506938(138916472, -), CAediting_506939(138921394, -), CAediting_506940(138921415, -), CAediting_506941(138921416, -), CAediting_506942(138921461, -), CAediting_506943(138921473, -), CAediting_506944(138921481, -), CAediting_506945(138921483, -), CAediting_506946(138921487, -), CAediting_506947(138921488, -), CAediting_506948(138921509, -), CAediting_506949(138921526, -), CAediting_506950(138921552, -), CAediting_506951(138921557, -), CAediting_506952(138921639, -), CAediting_506953(138921674, -), CAediting_506954(138921689, -), CAediting_506955(138921693, -), CAediting_506956(138921710, -), CAediting_506957(138921715, -), CAediting_506958(138921748, -), CAediting_506959(138921751, -), CAediting_506960(138921760, -), CAediting_506961(138921771, -), CAediting_506962(138921773, -), CAediting_506963(138921777, -), CAediting_506964(138921847, -), CAediting_506965(138921848, -), CAediting_506966(138921856, -), CAediting_506967(138921910, -), CAediting_506968(138921970, -), CAediting_506969(138936266, -), CAediting_506970(138936271, -), CAediting_506971(138938940, -), CAediting_506972(138938944, -), CAediting_506973(138938963, -), CAediting_506974(138938972, -), CAediting_506975(138938976, -), CAediting_506976(138939009, -), CAediting_506977(138949483, -), CAediting_506978(138949505, -), CAediting_506979(138949506, -), CAediting_506980(138949509, -), CAediting_506981(138949610, -), CAediting_506982(138949614, -), CAediting_506983(138949644, -), CAediting_506984(138950253, -), CAediting_506985(138950405, -), CAediting_506986(138950946, -), CAediting_506987(138951022, -), CAediting_506988(138952492, -), CAediting_506989(138952496, -), CAediting_506990(138952511, -), CAediting_506991(138952524, -), CAediting_506992(138952528, -), CAediting_506993(138952532, -), CAediting_506994(138952537, -), CAediting_506995(138952538, -), CAediting_506996(138952564, -), CAediting_506997(138952568, -), CAediting_506998(138952578, -), CAediting_506999(138952579, -), CAediting_507000(138952601, -), CAediting_507001(138952613, -), CAediting_507002(138952618, -), CAediting_507003(138952619, -), CAediting_507004(138952632, -), CAediting_507005(138952672, -), CAediting_507006(138952673, -), CAediting_507007(138952903, -), CAediting_507008(138952905, -), CAediting_507009(138952930, -), CAediting_507010(138952966, -), CAediting_507011(138953030, -), CAediting_507012(138953110, -), CAediting_507013(138953116, -), CAediting_507014(138955278, -), CAediting_507015(138955324, -), CAediting_507016(138955336, -), CAediting_507017(138967979, -), CAediting_507018(138968021, -), CAediting_507019(138968063, -), CAediting_507020(138969314, -), CAediting_507021(138969352, -), CAediting_507022(138969357, -), CAediting_507023(138969359, -), CAediting_507024(138969364, -), CAediting_507025(138969384, -), CAediting_507026(138969388, -), CAediting_507027(138969389, -), CAediting_507028(138969398, -), CAediting_507029(138969399, -), CAediting_507030(138969405, -), CAediting_507031(138969406, -), CAediting_507032(138969422, -), CAediting_507033(138969445, -), CAediting_507034(138969453, -), CAediting_507035(138969454, -), CAediting_507036(138969458, -), CAediting_507037(138969484, -), CAediting_507038(138969488, -), CAediting_507039(138969492, -), CAediting_507040(138969505, -), CAediting_507041(138969507, -), CAediting_507042(138969516, -), CAediting_507043(138969521, -), CAediting_507044(138969539, -), CAediting_507045(138969553, -), CAediting_507046(138969561, -), CAediting_507047(138969562, -), CAediting_507048(138970535, -), CAediting_507049(138970599, -), CAediting_507050(138970610, -), CAediting_507051(138970684, -), CAediting_507052(138970689, -), CAediting_507053(138970701, -), CAediting_507054(138970702, -), CAediting_507055(138970777, -), CAediting_507056(138975787, -), CAediting_507057(138977388, -), CAediting_507058(138977426, -), CAediting_507059(138977431, -), CAediting_507060(138977432, -), CAediting_507061(138978389, -), CAediting_507062(138978402, -), CAediting_507063(138978412, -), CAediting_507064(138978436, -), CAediting_507065(138978448, -), CAediting_507066(138978458, -), CAediting_507067(138978509, -), CAediting_507068(138978566, -), CAediting_507069(138978582, -), CAediting_507070(138978599, -), CAediting_507071(138978926, -), CAediting_507072(138978939, -), CAediting_507073(138980790, -), CAediting_507074(138980832, -), CAediting_507075(138983355, -), CAediting_507076(138983372, -), CAediting_507077(138984148, -), CAediting_507078(138984156, -), CAediting_507079(138984186, -), CAediting_507080(138984195, -), CAediting_507081(138984207, -), CAediting_507082(138984212, -), CAediting_507083(138984216, -), CAediting_507084(138984221, -), CAediting_507085(138984261, -), CAediting_507086(138984262, -), CAediting_507087(138984276, -), CAediting_507088(138984277, -), CAediting_507089(138984278, -), CAediting_507090(138984284, -), CAediting_507091(138984295, -), CAediting_507092(138984310, -),

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RNA editing positional annotations for REPS1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_506924chr6_138907253_-ncRNA_intronic
CAediting_506925chr6_138909804_-ncRNA_intronic
CAediting_506926chr6_138910364_-ncRNA_intronic
CAediting_506927chr6_138915521_-ncRNA_intronic
CAediting_506928chr6_138915525_-ncRNA_intronic
CAediting_506929chr6_138915538_-ncRNA_intronic
CAediting_506930chr6_138915541_-ncRNA_intronic
CAediting_506931chr6_138915549_-ncRNA_intronic
CAediting_506932chr6_138915568_-ncRNA_intronic
CAediting_506933chr6_138915581_-ncRNA_intronic
CAediting_506934chr6_138915585_-ncRNA_intronic
CAediting_506935chr6_138915705_-ncRNA_intronic
CAediting_506936chr6_138916310_-intronic
CAediting_506937chr6_138916458_-intronic
CAediting_506938chr6_138916472_-intronic
CAediting_506939chr6_138921394_-intronic
CAediting_506940chr6_138921415_-intronic
CAediting_506941chr6_138921416_-intronic
CAediting_506942chr6_138921461_-intronic
CAediting_506943chr6_138921473_-intronic
CAediting_506944chr6_138921481_-intronic
CAediting_506945chr6_138921483_-intronic
CAediting_506946chr6_138921487_-intronic
CAediting_506947chr6_138921488_-intronic
CAediting_506948chr6_138921509_-intronic
CAediting_506949chr6_138921526_-intronic
CAediting_506950chr6_138921552_-intronic
CAediting_506951chr6_138921557_-intronic
CAediting_506952chr6_138921639_-intronic
CAediting_506953chr6_138921674_-intronic
CAediting_506954chr6_138921689_-intronic
CAediting_506955chr6_138921693_-intronic
CAediting_506956chr6_138921710_-intronic
CAediting_506957chr6_138921715_-intronic
CAediting_506958chr6_138921748_-intronic
CAediting_506959chr6_138921751_-intronic
CAediting_506960chr6_138921760_-intronic
CAediting_506961chr6_138921771_-intronic
CAediting_506962chr6_138921773_-intronic
CAediting_506963chr6_138921777_-intronic
CAediting_506964chr6_138921847_-intronic
CAediting_506965chr6_138921848_-intronic
CAediting_506966chr6_138921856_-intronic
CAediting_506967chr6_138921910_-intronic
CAediting_506968chr6_138921970_-intronic
CAediting_506969chr6_138936266_-intronic
CAediting_506970chr6_138936271_-intronic
CAediting_506971chr6_138938940_-intronic
CAediting_506972chr6_138938944_-intronic
CAediting_506973chr6_138938963_-intronic
CAediting_506974chr6_138938972_-intronic
CAediting_506975chr6_138938976_-intronic
CAediting_506976chr6_138939009_-intronic
CAediting_506977chr6_138949483_-ncRNA_intronic
CAediting_506978chr6_138949505_-ncRNA_intronic
CAediting_506979chr6_138949506_-ncRNA_intronic
CAediting_506980chr6_138949509_-ncRNA_intronic
CAediting_506981chr6_138949610_-ncRNA_intronic
CAediting_506982chr6_138949614_-ncRNA_intronic
CAediting_506983chr6_138949644_-ncRNA_intronic
CAediting_506984chr6_138950253_-ncRNA_intronic
CAediting_506985chr6_138950405_-ncRNA_intronic
CAediting_506986chr6_138950946_-ncRNA_intronic
CAediting_506987chr6_138951022_-ncRNA_intronic
CAediting_506988chr6_138952492_-ncRNA_intronic
CAediting_506989chr6_138952496_-ncRNA_intronic
CAediting_506990chr6_138952511_-ncRNA_intronic
CAediting_506991chr6_138952524_-ncRNA_intronic
CAediting_506992chr6_138952528_-ncRNA_intronic
CAediting_506993chr6_138952532_-ncRNA_intronic
CAediting_506994chr6_138952537_-ncRNA_intronic
CAediting_506995chr6_138952538_-ncRNA_intronic
CAediting_506996chr6_138952564_-ncRNA_intronic
CAediting_506997chr6_138952568_-ncRNA_intronic
CAediting_506998chr6_138952578_-ncRNA_intronic
CAediting_506999chr6_138952579_-ncRNA_intronic
CAediting_507000chr6_138952601_-ncRNA_intronic
CAediting_507001chr6_138952613_-ncRNA_intronic
CAediting_507002chr6_138952618_-ncRNA_intronic
CAediting_507003chr6_138952619_-ncRNA_intronic
CAediting_507004chr6_138952632_-ncRNA_intronic
CAediting_507005chr6_138952672_-ncRNA_intronic
CAediting_507006chr6_138952673_-ncRNA_intronic
CAediting_507007chr6_138952903_-ncRNA_intronic
CAediting_507008chr6_138952905_-ncRNA_intronic
CAediting_507009chr6_138952930_-ncRNA_intronic
CAediting_507010chr6_138952966_-ncRNA_intronic
CAediting_507011chr6_138953030_-ncRNA_intronic
CAediting_507012chr6_138953110_-ncRNA_intronic
CAediting_507013chr6_138953116_-ncRNA_intronic
CAediting_507014chr6_138955278_-ncRNA_intronic
CAediting_507015chr6_138955324_-ncRNA_intronic
CAediting_507016chr6_138955336_-ncRNA_intronic
CAediting_507017chr6_138967979_-ncRNA_intronic
CAediting_507018chr6_138968021_-ncRNA_intronic
CAediting_507019chr6_138968063_-ncRNA_intronic
CAediting_507020chr6_138969314_-ncRNA_intronic
CAediting_507021chr6_138969352_-ncRNA_intronic
CAediting_507022chr6_138969357_-ncRNA_intronic
CAediting_507023chr6_138969359_-ncRNA_intronic
CAediting_507024chr6_138969364_-ncRNA_intronic
CAediting_507025chr6_138969384_-ncRNA_intronic
CAediting_507026chr6_138969388_-ncRNA_intronic
CAediting_507027chr6_138969389_-ncRNA_intronic
CAediting_507028chr6_138969398_-ncRNA_intronic
CAediting_507029chr6_138969399_-ncRNA_intronic
CAediting_507030chr6_138969405_-ncRNA_intronic
CAediting_507031chr6_138969406_-ncRNA_intronic
CAediting_507032chr6_138969422_-ncRNA_intronic
CAediting_507033chr6_138969445_-ncRNA_intronic
CAediting_507034chr6_138969453_-ncRNA_intronic
CAediting_507035chr6_138969454_-ncRNA_intronic
CAediting_507036chr6_138969458_-ncRNA_intronic
CAediting_507037chr6_138969484_-ncRNA_intronic
CAediting_507038chr6_138969488_-ncRNA_intronic
CAediting_507039chr6_138969492_-ncRNA_intronic
CAediting_507040chr6_138969505_-ncRNA_intronic
CAediting_507041chr6_138969507_-ncRNA_intronic
CAediting_507042chr6_138969516_-ncRNA_intronic
CAediting_507043chr6_138969521_-ncRNA_intronic
CAediting_507044chr6_138969539_-ncRNA_intronic
CAediting_507045chr6_138969553_-ncRNA_intronic
CAediting_507046chr6_138969561_-ncRNA_intronic
CAediting_507047chr6_138969562_-ncRNA_intronic
CAediting_507048chr6_138970535_-ncRNA_intronic
CAediting_507049chr6_138970599_-ncRNA_intronic
CAediting_507050chr6_138970610_-ncRNA_intronic
CAediting_507051chr6_138970684_-ncRNA_intronic
CAediting_507052chr6_138970689_-ncRNA_intronic
CAediting_507053chr6_138970701_-ncRNA_intronic
CAediting_507054chr6_138970702_-ncRNA_intronic
CAediting_507055chr6_138970777_-ncRNA_intronic
CAediting_507056chr6_138975787_-ncRNA_intronic
CAediting_507057chr6_138977388_-ncRNA_intronic
CAediting_507058chr6_138977426_-ncRNA_intronic
CAediting_507059chr6_138977431_-ncRNA_intronic
CAediting_507060chr6_138977432_-ncRNA_intronic
CAediting_507061chr6_138978389_-ncRNA_intronic
CAediting_507062chr6_138978402_-ncRNA_intronic
CAediting_507063chr6_138978412_-ncRNA_intronic
CAediting_507064chr6_138978436_-ncRNA_intronic
CAediting_507065chr6_138978448_-ncRNA_intronic
CAediting_507066chr6_138978458_-ncRNA_intronic
CAediting_507067chr6_138978509_-ncRNA_intronic
CAediting_507068chr6_138978566_-ncRNA_intronic
CAediting_507069chr6_138978582_-ncRNA_intronic
CAediting_507070chr6_138978599_-ncRNA_intronic
CAediting_507071chr6_138978926_-ncRNA_intronic
CAediting_507072chr6_138978939_-ncRNA_intronic
CAediting_507073chr6_138980790_-ncRNA_intronic
CAediting_507074chr6_138980832_-ncRNA_intronic
CAediting_507075chr6_138983355_-ncRNA_intronic
CAediting_507076chr6_138983372_-ncRNA_intronic
CAediting_507077chr6_138984148_-ncRNA_intronic
CAediting_507078chr6_138984156_-ncRNA_intronic
CAediting_507079chr6_138984186_-ncRNA_intronic
CAediting_507080chr6_138984195_-ncRNA_intronic
CAediting_507081chr6_138984207_-ncRNA_intronic
CAediting_507082chr6_138984212_-ncRNA_intronic
CAediting_507083chr6_138984216_-ncRNA_intronic
CAediting_507084chr6_138984221_-ncRNA_intronic
CAediting_507085chr6_138984261_-ncRNA_intronic
CAediting_507086chr6_138984262_-ncRNA_intronic
CAediting_507087chr6_138984276_-ncRNA_intronic
CAediting_507088chr6_138984277_-ncRNA_intronic
CAediting_507089chr6_138984278_-ncRNA_intronic
CAediting_507090chr6_138984284_-ncRNA_intronic
CAediting_507091chr6_138984295_-ncRNA_intronic
CAediting_507092chr6_138984310_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_506924chr6_138907253_-SINEAluFLAM_A
CAediting_506925chr6_138909804_-LTRERVL-MaLRTHE1D
CAediting_506926chr6_138910364_-SINEAluAluJb
CAediting_506927chr6_138915521_-SINEAluAluSz
CAediting_506928chr6_138915525_-SINEAluAluSz
CAediting_506929chr6_138915538_-SINEAluAluSz
CAediting_506930chr6_138915541_-SINEAluAluSz
CAediting_506931chr6_138915549_-SINEAluAluSz
CAediting_506932chr6_138915568_-SINEAluAluSz
CAediting_506933chr6_138915581_-SINEAluAluSz
CAediting_506934chr6_138915585_-SINEAluAluSz
CAediting_506935chr6_138915705_-SINEAluAluSz
CAediting_506936chr6_138916310_-SINEAluAluSx
CAediting_506937chr6_138916458_-SINEAluAluSx
CAediting_506938chr6_138916472_-SINEAluAluSx
CAediting_506939chr6_138921394_-SINEAluAluJb
CAediting_506940chr6_138921415_-SINEAluAluJb
CAediting_506941chr6_138921416_-SINEAluAluJb
CAediting_506942chr6_138921461_-SINEAluAluJb
CAediting_506943chr6_138921473_-SINEAluAluJb
CAediting_506944chr6_138921481_-SINEAluAluJb
CAediting_506945chr6_138921483_-SINEAluAluJb
CAediting_506946chr6_138921487_-SINEAluAluJb
CAediting_506947chr6_138921488_-SINEAluAluJb
CAediting_506948chr6_138921509_-SINEAluAluJb
CAediting_506949chr6_138921526_-SINEAluAluJb
CAediting_506950chr6_138921552_-SINEAluAluJb
CAediting_506951chr6_138921557_-SINEAluAluJb
CAediting_506952chr6_138921639_-SINEAluAluSg
CAediting_506953chr6_138921674_-SINEAluAluSg
CAediting_506954chr6_138921689_-SINEAluAluSg
CAediting_506955chr6_138921693_-SINEAluAluSg
CAediting_506956chr6_138921710_-SINEAluAluSg
CAediting_506957chr6_138921715_-SINEAluAluSg
CAediting_506958chr6_138921748_-SINEAluAluSg
CAediting_506959chr6_138921751_-SINEAluAluSg
CAediting_506960chr6_138921760_-SINEAluAluSg
CAediting_506961chr6_138921771_-SINEAluAluSg
CAediting_506962chr6_138921773_-SINEAluAluSg
CAediting_506963chr6_138921777_-SINEAluAluSg
CAediting_506964chr6_138921847_-SINEAluAluSg
CAediting_506965chr6_138921848_-SINEAluAluSg
CAediting_506966chr6_138921856_-SINEAluAluSg
CAediting_506967chr6_138921910_-SINEAluAluJb
CAediting_506968chr6_138921970_-SINEAluAluJb
CAediting_506969chr6_138936266_-SINEAluFRAM
CAediting_506970chr6_138936271_-SINEAluFRAM
CAediting_506971chr6_138938940_-SINEAluAluSx3
CAediting_506972chr6_138938944_-SINEAluAluSx3
CAediting_506973chr6_138938963_-SINEAluAluSx3
CAediting_506974chr6_138938972_-SINEAluAluSx3
CAediting_506975chr6_138938976_-SINEAluAluSx3
CAediting_506976chr6_138939009_-SINEAluAluSx3
CAediting_506977chr6_138949483_-SINEAluAluSz
CAediting_506978chr6_138949505_-SINEAluAluSz
CAediting_506979chr6_138949506_-SINEAluAluSz
CAediting_506980chr6_138949509_-SINEAluAluSz
CAediting_506981chr6_138949610_-SINEAluAluSz
CAediting_506982chr6_138949614_-SINEAluAluSz
CAediting_506983chr6_138949644_-SINEAluAluSz
CAediting_506984chr6_138950253_-SINEAluAluJr
CAediting_506985chr6_138950405_-SINEAluAluJr
CAediting_506986chr6_138950946_-SINEAluAluSp
CAediting_506987chr6_138951022_-SINEAluAluSp
CAediting_506988chr6_138952492_-SINEAluAluSx1
CAediting_506989chr6_138952496_-SINEAluAluSx1
CAediting_506990chr6_138952511_-SINEAluAluSx1
CAediting_506991chr6_138952524_-SINEAluAluSx1
CAediting_506992chr6_138952528_-SINEAluAluSx1
CAediting_506993chr6_138952532_-SINEAluAluSx1
CAediting_506994chr6_138952537_-SINEAluAluSx1
CAediting_506995chr6_138952538_-SINEAluAluSx1
CAediting_506996chr6_138952564_-SINEAluAluSx1
CAediting_506997chr6_138952568_-SINEAluAluSx1
CAediting_506998chr6_138952578_-SINEAluAluSx1
CAediting_506999chr6_138952579_-SINEAluAluSx1
CAediting_507000chr6_138952601_-SINEAluAluSx1
CAediting_507001chr6_138952613_-SINEAluAluSx1
CAediting_507002chr6_138952618_-SINEAluAluSx1
CAediting_507003chr6_138952619_-SINEAluAluSx1
CAediting_507004chr6_138952632_-SINEAluAluSx1
CAediting_507005chr6_138952672_-SINEAluAluSx1
CAediting_507006chr6_138952673_-SINEAluAluSx1
CAediting_507007chr6_138952903_-SINEAluAluSp
CAediting_507008chr6_138952905_-SINEAluAluSp
CAediting_507009chr6_138952930_-SINEAluAluSp
CAediting_507010chr6_138952966_-SINEAluAluSp
CAediting_507011chr6_138953030_-SINEAluAluSp
CAediting_507012chr6_138953110_-SINEAluAluSp
CAediting_507013chr6_138953116_-SINEAluAluSp
CAediting_507014chr6_138955278_-SINEAluAluJr
CAediting_507015chr6_138955324_-SINEAluAluJr
CAediting_507016chr6_138955336_-SINEAluAluJr
CAediting_507017chr6_138967979_-DNATcMar-TiggerTigger5b
CAediting_507018chr6_138968021_-DNATcMar-TiggerTigger5b
CAediting_507019chr6_138968063_-DNATcMar-TiggerTigger5b
CAediting_507021chr6_138969352_-SINEAluAluJb
CAediting_507022chr6_138969357_-SINEAluAluJb
CAediting_507023chr6_138969359_-SINEAluAluJb
CAediting_507024chr6_138969364_-SINEAluAluJb
CAediting_507025chr6_138969384_-SINEAluAluJb
CAediting_507026chr6_138969388_-SINEAluAluJb
CAediting_507027chr6_138969389_-SINEAluAluJb
CAediting_507028chr6_138969398_-SINEAluAluJb
CAediting_507029chr6_138969399_-SINEAluAluJb
CAediting_507030chr6_138969405_-SINEAluAluJb
CAediting_507031chr6_138969406_-SINEAluAluJb
CAediting_507032chr6_138969422_-SINEAluAluJb
CAediting_507033chr6_138969445_-SINEAluAluJb
CAediting_507034chr6_138969453_-SINEAluAluJb
CAediting_507035chr6_138969454_-SINEAluAluJb
CAediting_507036chr6_138969458_-SINEAluAluJb
CAediting_507037chr6_138969484_-SINEAluAluJb
CAediting_507038chr6_138969488_-SINEAluAluJb
CAediting_507039chr6_138969492_-SINEAluAluJb
CAediting_507040chr6_138969505_-SINEAluAluJb
CAediting_507041chr6_138969507_-SINEAluAluJb
CAediting_507042chr6_138969516_-SINEAluAluJb
CAediting_507043chr6_138969521_-SINEAluAluJb
CAediting_507044chr6_138969539_-SINEAluAluJb
CAediting_507045chr6_138969553_-SINEAluAluJb
CAediting_507046chr6_138969561_-SINEAluAluJb
CAediting_507047chr6_138969562_-SINEAluAluJb
CAediting_507048chr6_138970535_-SINEAluAluSz
CAediting_507049chr6_138970599_-SINEAluAluSz
CAediting_507050chr6_138970610_-SINEAluAluSz
CAediting_507051chr6_138970684_-SINEAluAluSz
CAediting_507052chr6_138970689_-SINEAluAluSz
CAediting_507053chr6_138970701_-SINEAluAluSz
CAediting_507054chr6_138970702_-SINEAluAluSz
CAediting_507055chr6_138970777_-SINEAluAluSz
CAediting_507056chr6_138975787_-SINEAluAluSx1
CAediting_507057chr6_138977388_-SINEAluAluJo
CAediting_507058chr6_138977426_-SINEAluAluJo
CAediting_507059chr6_138977431_-SINEAluAluJo
CAediting_507060chr6_138977432_-SINEAluAluJo
CAediting_507061chr6_138978389_-SINEAluAluJb
CAediting_507062chr6_138978402_-SINEAluAluJb
CAediting_507063chr6_138978412_-SINEAluAluJb
CAediting_507064chr6_138978436_-SINEAluAluJb
CAediting_507065chr6_138978448_-SINEAluAluJb
CAediting_507066chr6_138978458_-SINEAluAluJb
CAediting_507067chr6_138978509_-SINEAluAluJb
CAediting_507068chr6_138978566_-SINEAluAluJb
CAediting_507069chr6_138978582_-SINEAluAluJb
CAediting_507070chr6_138978599_-SINEAluAluJb
CAediting_507071chr6_138978926_-SINEAluAluSg
CAediting_507072chr6_138978939_-SINEAluAluSg
CAediting_507073chr6_138980790_-SINEAluAluJb
CAediting_507074chr6_138980832_-SINEAluAluJb
CAediting_507075chr6_138983355_-SINEAluAluSx4
CAediting_507076chr6_138983372_-SINEAluAluSx4
CAediting_507077chr6_138984148_-SINEAluAluSx
CAediting_507078chr6_138984156_-SINEAluAluSx
CAediting_507079chr6_138984186_-SINEAluAluSx
CAediting_507080chr6_138984195_-SINEAluAluSx
CAediting_507081chr6_138984207_-SINEAluAluSx
CAediting_507082chr6_138984212_-SINEAluAluSx
CAediting_507083chr6_138984216_-SINEAluAluSx
CAediting_507084chr6_138984221_-SINEAluAluSx
CAediting_507085chr6_138984261_-SINEAluAluSx
CAediting_507086chr6_138984262_-SINEAluAluSx
CAediting_507087chr6_138984276_-SINEAluAluSx
CAediting_507088chr6_138984277_-SINEAluAluSx
CAediting_507089chr6_138984278_-SINEAluAluSx
CAediting_507090chr6_138984284_-SINEAluAluSx
CAediting_507091chr6_138984295_-SINEAluAluSx
CAediting_507092chr6_138984310_-SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for REPS1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135597.17.REPS1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000135597.17.REPS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for REPS1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for REPS1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for REPS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229415chr17_67471547_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389037641389037707mer-m8138903763138903789149-16.48
CAediting_1229415chr17_67471547_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389037641389037707mer-m8138903751138903775146-11.78
CAediting_1229415chr17_67471547_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389037511389037588mer-1a138903751138903775146-11.78
CAediting_396018chr5_1062918_-ENSG00000135597.17ENST00000450536hsa-miR-46351389038411389038477mer-m8138903840138903860145-18.87
CAediting_1160181chr17_7017644_-ENSG00000135597.17ENST00000626459hsa-miR-195-3p1389264151389264217mer-m8138926414138926435146-10.13
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000626459hsa-miR-561-3p1389264381389264447mer-m8138926437138926457162-21.4
CAediting_1054808chr15_66496985_-ENSG00000135597.17ENST00000483468hsa-miR-45121389292631389292697mer-m8138929262138929283142-14.08
CAediting_1160181chr17_7017644_-ENSG00000135597.17ENST00000483468hsa-miR-195-3p1389264151389264217mer-m8138926414138926435146-10.13
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000483468hsa-miR-561-3p1389282331389282397mer-m8138928232138928253140-6.21
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000483468hsa-miR-561-3p1389264381389264447mer-m8138926437138926457162-21.4
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000483468hsa-miR-561-3p1389294841389294907mer-m8138929483138929505147-11.99
CAediting_442554chr5_154685830_+ENSG00000135597.17ENST00000483468hsa-miR-13031389273611389273688mer-1a138927361138927383141-13.6
CAediting_1160181chr17_7017644_-ENSG00000135597.17ENST00000431346hsa-miR-195-3p1389264151389264217mer-m8138926414138926435146-10.13
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000431346hsa-miR-561-3p1389264381389264447mer-m8138926437138926457162-21.4

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229415chr17_67471547_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389050191389050257mer-m8138905018138905040147-9.52
CAediting_1229413chr17_67471544_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389050191389050257mer-m8138905018138905040147-9.52
CAediting_1229414chr17_67471546_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389050191389050257mer-m8138905018138905040147-9.52
CAediting_1229415chr17_67471547_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389045961389046027mer-m8138904595138904618148-11.3
CAediting_1229413chr17_67471544_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389045961389046027mer-m8138904595138904618148-11.3
CAediting_1229414chr17_67471546_+ENSG00000135597.17ENST00000450536hsa-miR-548aa1389045961389046027mer-m8138904595138904618148-11.3
CAediting_1229413chr17_67471544_+ENSG00000135597.17ENST00000626459hsa-miR-548aa1389050191389050257mer-m8138905018138905040147-9.52
CAediting_1229414chr17_67471546_+ENSG00000135597.17ENST00000626459hsa-miR-548aa1389050191389050257mer-m8138905018138905040147-9.52
CAediting_1229415chr17_67471547_+ENSG00000135597.17ENST00000626459hsa-miR-548aa1389050191389050257mer-m8138905018138905040147-9.52
CAediting_1229413chr17_67471544_+ENSG00000135597.17ENST00000626459hsa-miR-548aa1389045961389046027mer-m8138904595138904618148-11.3
CAediting_1229414chr17_67471546_+ENSG00000135597.17ENST00000626459hsa-miR-548aa1389045961389046027mer-m8138904595138904618148-11.3
CAediting_1229415chr17_67471547_+ENSG00000135597.17ENST00000626459hsa-miR-548aa1389045961389046027mer-m8138904595138904618148-11.3
CAediting_442554chr5_154685830_+ENSG00000135597.17ENST00000483468hsa-miR-13031389282941389283007mer-m8138928293138928317145-20.49
CAediting_1160181chr17_7017644_-ENSG00000135597.17ENST00000483468hsa-miR-195-3p1389273311389273388mer-1a138927331138927352150-9.02
CAediting_393chr1_1167164_+ENSG00000135597.17ENST00000483468hsa-miR-200b-3p1389287381389287458mer-1a138928738138928759151-8.59
CAediting_393chr1_1167164_+ENSG00000135597.17ENST00000483468hsa-miR-200b-3p1389277471389277537mer-m8138927746138927770143-11.02
CAediting_1054808chr15_66496985_-ENSG00000135597.17ENST00000483468hsa-miR-45121389292921389292987mer-m8138929291138929312150-28.31
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000483468hsa-miR-561-3p1389279271389279337mer-m8138927926138927951153-9.72
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000483468hsa-miR-561-3p1389275751389275806mer138927574138927595140-11.43
CAediting_228905chr2_188297554_+ENSG00000135597.17ENST00000483468hsa-miR-561-3p1389269051389269117mer-m8138926904138926925140-8.12
CAediting_980496chr14_31014685_-ENSG00000135597.17ENST00000483468hsa-miR-624-3p1389297551389297617mer-m8138929754138929774154-15.69
CAediting_1351755chr19_40282625_-ENSG00000135597.17ENST00000483468hsa-miR-6411389287561389287616mer138928755138928777152-19.62
CAediting_442554chr5_154685830_+ENSG00000135597.17ENST00000526022hsa-miR-13031389073831389073897mer-m8138907382138907403152-12.77

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for REPS1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for REPS1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_506943chr6_138921473_-0.02814346378610090.231485914589347....

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Relation with cancer stages for REPS1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for REPS1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for REPS1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for REPS1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
REPS1C4693583NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 71UNIPROT