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Editing gene: PKP4 (CAeditome ID:8502)

Gene summary for PKP4

Gene summary

Gene information	Gene symbol	PKP4
	Gene ID	8502
	Gene name	plakophilin 4
	Synonyms	p0071
	Cytomap	2q24.1
	Type of gene	protein-coding
	Description	plakophilin-4catenin 4
	Modification date	20210518
	UniProtAcc	Q99569
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PKP4	GO:0030496	Plakophilin-4	22965878
PKP4	GO:0044291	Plakophilin-4	22965878
PKP4	GO:0043547	Plakophilin-4	17115030
PKP4	GO:0000922	Plakophilin-4	17115030
PKP4	GO:0005737	Plakophilin-4	22965878
PKP4	GO:0005856	Plakophilin-4	8937994
PKP4	GO:0005886	Plakophilin-4	0000052
PKP4	GO:0005886	Plakophilin-4	8937994
PKP4	GO:0005911	Plakophilin-4	8937994
PKP4	GO:0009898	Plakophilin-4	17115030
PKP4	GO:0030054	Plakophilin-4	0000052
PKP4	GO:0030057	Plakophilin-4	8937994
PKP4	GO:0030496	Plakophilin-4	17115030
PKP4	GO:0048471	Plakophilin-4	8937994
PKP4	GO:0051233	Plakophilin-4	17115030
PKP4	GO:0072686	Plakophilin-4	17115030

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RNA A-to-I events for PKP4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000144283.20

RNA A-to-I editing events in Cancer.

CAediting_219391(158466495, +), CAediting_219392(158466584, +), CAediting_219393(158466620, +), CAediting_219394(158467431, +), CAediting_219395(158467445, +), CAediting_219396(158467449, +), CAediting_219397(158467472, +), CAediting_219398(158467591, +), CAediting_219399(158467596, +), CAediting_219400(158467613, +), CAediting_219401(158467621, +), CAediting_219402(158467626, +), CAediting_219403(158467637, +), CAediting_219404(158467644, +), CAediting_219405(158467645, +), CAediting_219406(158467650, +), CAediting_219407(158467656, +), CAediting_219408(158467664, +), CAediting_219409(158467700, +), CAediting_219410(158467744, +), CAediting_219411(158467767, +), CAediting_219412(158467772, +), CAediting_219413(158467786, +), CAediting_219414(158468803, +), CAediting_219415(158468914, +), CAediting_219416(158469219, +), CAediting_219417(158470467, +), CAediting_219418(158470469, +), CAediting_219419(158470472, +), CAediting_219420(158470476, +), CAediting_219421(158470477, +), CAediting_219422(158470502, +), CAediting_219423(158470516, +), CAediting_219424(158470530, +), CAediting_219425(158470531, +), CAediting_219426(158470537, +), CAediting_219427(158470538, +), CAediting_219428(158470546, +), CAediting_219429(158470551, +), CAediting_219430(158470560, +), CAediting_219431(158470563, +), CAediting_219432(158470618, +), CAediting_219433(158470619, +), CAediting_219434(158470626, +), CAediting_219435(158470627, +), CAediting_219436(158470628, +), CAediting_219437(158470639, +), CAediting_219438(158470654, +), CAediting_219439(158470680, +), CAediting_219440(158470683, +), CAediting_219441(158470684, +), CAediting_219442(158470690, +), CAediting_219443(158470708, +), CAediting_219444(158470711, +), CAediting_219445(158470712, +), CAediting_219446(158470719, +), CAediting_219447(158470720, +), CAediting_219448(158470746, +), CAediting_219449(158470748, +), CAediting_219450(158470753, +), CAediting_219451(158470761, +), CAediting_219452(158470768, +), CAediting_219453(158470787, +), CAediting_219454(158470795, +), CAediting_219455(158470833, +), CAediting_219456(158470834, +), CAediting_219457(158470835, +), CAediting_219458(158470837, +), CAediting_219459(158470858, +), CAediting_219460(158470871, +), CAediting_219461(158470916, +), CAediting_219462(158472297, +), CAediting_219463(158474643, +), CAediting_219464(158474644, +), CAediting_219465(158474843, +), CAediting_219466(158474859, +), CAediting_219467(158474862, +), CAediting_219468(158474867, +), CAediting_219469(158474870, +), CAediting_219470(158474898, +), CAediting_219471(158474927, +), CAediting_219472(158474938, +), CAediting_219473(158474948, +), CAediting_219474(158474949, +), CAediting_219475(158474953, +), CAediting_219476(158474963, +), CAediting_219477(158474966, +), CAediting_219478(158474976, +), CAediting_219479(158474992, +), CAediting_219480(158474997, +), CAediting_219481(158475003, +), CAediting_219482(158475058, +), CAediting_219483(158475061, +), CAediting_219484(158475136, +), CAediting_219485(158476364, +), CAediting_219486(158476400, +), CAediting_219487(158476405, +), CAediting_219488(158476411, +), CAediting_219489(158476460, +), CAediting_219490(158476480, +), CAediting_219491(158476545, +), CAediting_219492(158476566, +), CAediting_219493(158477724, +), CAediting_219494(158477725, +), CAediting_219495(158477747, +), CAediting_219496(158477751, +), CAediting_219497(158477760, +), CAediting_219498(158480260, +), CAediting_219499(158480268, +), CAediting_219500(158481162, +), CAediting_219501(158481171, +), CAediting_219502(158482349, +), CAediting_219503(158482401, +), CAediting_219504(158482559, +), CAediting_219505(158482560, +), CAediting_219506(158482563, +), CAediting_219507(158482597, +), CAediting_219508(158482602, +), CAediting_219509(158482603, +), CAediting_219510(158482613, +), CAediting_219511(158482630, +), CAediting_219512(158482634, +), CAediting_219513(158482671, +), CAediting_219514(158482680, +), CAediting_219515(158482686, +), CAediting_219516(158482689, +), CAediting_219517(158482715, +), CAediting_219518(158491819, +), CAediting_219519(158491827, +), CAediting_219520(158491870, +), CAediting_219521(158494964, +), CAediting_219522(158494977, +), CAediting_219523(158495035, +), CAediting_219524(158495098, +), CAediting_219525(158495193, +), CAediting_219526(158495574, +), CAediting_219527(158495580, +), CAediting_219528(158495581, +), CAediting_219529(158495633, +), CAediting_219530(158495648, +), CAediting_219531(158495700, +), CAediting_219532(158495713, +), CAediting_219533(158495714, +), CAediting_219534(158495775, +), CAediting_219535(158495791, +), CAediting_219536(158496050, +), CAediting_219537(158496055, +), CAediting_219538(158496060, +), CAediting_219539(158496084, +), CAediting_219540(158496190, +), CAediting_219541(158496241, +), CAediting_219542(158496243, +), CAediting_219543(158508234, +), CAediting_219544(158508245, +), CAediting_219545(158508271, +), CAediting_219546(158508285, +), CAediting_219547(158508286, +), CAediting_219548(158508315, +), CAediting_219549(158508321, +), CAediting_219550(158508354, +), CAediting_219551(158508355, +), CAediting_219552(158511186, +), CAediting_219553(158514821, +), CAediting_219554(158515439, +), CAediting_219555(158515784, +), CAediting_219556(158515790, +), CAediting_219557(158515791, +), CAediting_219558(158515836, +), CAediting_219559(158515844, +), CAediting_219560(158515986, +), CAediting_219561(158516708, +), CAediting_219562(158516723, +), CAediting_219563(158516923, +), CAediting_219564(158517857, +), CAediting_219565(158535463, +), CAediting_219566(158535571, +), CAediting_219567(158537772, +), CAediting_219568(158537818, +), CAediting_219569(158537870, +), CAediting_219570(158537887, +), CAediting_219571(158537932, +), CAediting_219572(158537937, +), CAediting_219573(158537961, +), CAediting_219574(158537962, +), CAediting_219575(158538001, +), CAediting_219576(158538004, +), CAediting_219577(158538583, +), CAediting_219578(158538614, +), CAediting_219579(158538676, +), CAediting_219580(158538703, +), CAediting_219581(158538722, +), CAediting_219582(158597876, +), CAediting_219583(158597938, +), CAediting_219584(158598648, +), CAediting_219585(158606293, +), CAediting_219586(158613472, +), CAediting_219587(158621513, +), CAediting_219588(158621626, +), CAediting_219589(158621631, +), CAediting_219590(158621648, +), CAediting_219591(158621703, +), CAediting_219592(158623193, +), CAediting_219593(158623195, +), CAediting_219594(158623203, +), CAediting_219595(158623225, +), CAediting_219596(158623304, +), CAediting_219597(158623320, +), CAediting_219598(158623322, +), CAediting_219599(158623403, +), CAediting_219600(158623417, +), CAediting_219601(158623418, +), CAediting_219602(158623421, +), CAediting_219603(158641063, +), CAediting_219604(158641112, +), CAediting_219605(158641131, +), CAediting_219606(158641136, +), CAediting_219607(158641231, +), CAediting_219608(158641259, +), CAediting_219609(158642072, +), CAediting_219610(158642207, +), CAediting_219611(158642259, +), CAediting_219612(158643433, +), CAediting_219613(158643434, +), CAediting_219614(158643447, +), CAediting_219615(158643455, +), CAediting_219616(158643456, +), CAediting_219617(158643461, +), CAediting_219618(158643474, +), CAediting_219619(158643478, +), CAediting_219620(158643482, +), CAediting_219621(158643485, +), CAediting_219622(158643491, +), CAediting_219623(158643496, +), CAediting_219624(158643510, +), CAediting_219625(158643516, +), CAediting_219626(158643524, +), CAediting_219627(158643525, +), CAediting_219628(158643527, +), CAediting_219629(158643529, +), CAediting_219630(158643538, +), CAediting_219631(158643550, +), CAediting_219632(158643551, +), CAediting_219633(158643552, +), CAediting_219634(158643553, +), CAediting_219635(158643555, +), CAediting_219636(158643556, +), CAediting_219637(158643565, +), CAediting_219638(158643581, +), CAediting_219639(158643597, +), CAediting_219640(158643601, +), CAediting_219641(158643608, +), CAediting_219642(158643614, +), CAediting_219643(158643618, +), CAediting_219644(158643627, +), CAediting_219645(158643631, +), CAediting_219646(158643632, +), CAediting_219647(158643653, +), CAediting_219648(158643669, +), CAediting_219649(158643725, +), CAediting_219650(158643785, +), CAediting_219651(158643809, +), CAediting_219652(158643827, +), CAediting_219653(158643835, +), CAediting_219654(158643840, +), CAediting_219655(158643845, +), CAediting_219656(158643846, +), CAediting_219657(158643866, +), CAediting_219658(158643883, +), CAediting_219659(158643895, +), CAediting_219660(158643896, +), CAediting_219661(158643907, +), CAediting_219662(158643927, +), CAediting_219663(158643949, +), CAediting_219664(158643951, +), CAediting_219665(158643957, +), CAediting_219666(158643975, +), CAediting_219667(158643987, +), CAediting_219668(158644000, +), CAediting_219669(158644018, +), CAediting_219670(158644027, +), CAediting_219671(158644028, +), CAediting_219672(158648737, +),

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RNA editing positional annotations for PKP4 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_219391	chr2_158466495_+	ncRNA_intronic
CAediting_219392	chr2_158466584_+	ncRNA_intronic
CAediting_219393	chr2_158466620_+	ncRNA_intronic
CAediting_219394	chr2_158467431_+	ncRNA_intronic
CAediting_219395	chr2_158467445_+	ncRNA_intronic
CAediting_219396	chr2_158467449_+	ncRNA_intronic
CAediting_219397	chr2_158467472_+	ncRNA_intronic
CAediting_219398	chr2_158467591_+	ncRNA_intronic
CAediting_219399	chr2_158467596_+	ncRNA_intronic
CAediting_219400	chr2_158467613_+	ncRNA_intronic
CAediting_219401	chr2_158467621_+	ncRNA_intronic
CAediting_219402	chr2_158467626_+	ncRNA_intronic
CAediting_219403	chr2_158467637_+	ncRNA_intronic
CAediting_219404	chr2_158467644_+	ncRNA_intronic
CAediting_219405	chr2_158467645_+	ncRNA_intronic
CAediting_219406	chr2_158467650_+	ncRNA_intronic
CAediting_219407	chr2_158467656_+	ncRNA_intronic
CAediting_219408	chr2_158467664_+	ncRNA_intronic
CAediting_219409	chr2_158467700_+	ncRNA_intronic
CAediting_219410	chr2_158467744_+	ncRNA_intronic
CAediting_219411	chr2_158467767_+	ncRNA_intronic
CAediting_219412	chr2_158467772_+	ncRNA_intronic
CAediting_219413	chr2_158467786_+	ncRNA_intronic
CAediting_219414	chr2_158468803_+	ncRNA_intronic
CAediting_219415	chr2_158468914_+	ncRNA_intronic
CAediting_219416	chr2_158469219_+	ncRNA_intronic
CAediting_219417	chr2_158470467_+	ncRNA_intronic
CAediting_219418	chr2_158470469_+	ncRNA_intronic
CAediting_219419	chr2_158470472_+	ncRNA_intronic
CAediting_219420	chr2_158470476_+	ncRNA_intronic
CAediting_219421	chr2_158470477_+	ncRNA_intronic
CAediting_219422	chr2_158470502_+	ncRNA_intronic
CAediting_219423	chr2_158470516_+	ncRNA_intronic
CAediting_219424	chr2_158470530_+	ncRNA_intronic
CAediting_219425	chr2_158470531_+	ncRNA_intronic
CAediting_219426	chr2_158470537_+	ncRNA_intronic
CAediting_219427	chr2_158470538_+	ncRNA_intronic
CAediting_219428	chr2_158470546_+	ncRNA_intronic
CAediting_219429	chr2_158470551_+	ncRNA_intronic
CAediting_219430	chr2_158470560_+	ncRNA_intronic
CAediting_219431	chr2_158470563_+	ncRNA_intronic
CAediting_219432	chr2_158470618_+	ncRNA_intronic
CAediting_219433	chr2_158470619_+	ncRNA_intronic
CAediting_219434	chr2_158470626_+	ncRNA_intronic
CAediting_219435	chr2_158470627_+	ncRNA_intronic
CAediting_219436	chr2_158470628_+	ncRNA_intronic
CAediting_219437	chr2_158470639_+	ncRNA_intronic
CAediting_219438	chr2_158470654_+	ncRNA_intronic
CAediting_219439	chr2_158470680_+	ncRNA_intronic
CAediting_219440	chr2_158470683_+	ncRNA_intronic
CAediting_219441	chr2_158470684_+	ncRNA_intronic
CAediting_219442	chr2_158470690_+	ncRNA_intronic
CAediting_219443	chr2_158470708_+	ncRNA_intronic
CAediting_219444	chr2_158470711_+	ncRNA_intronic
CAediting_219445	chr2_158470712_+	ncRNA_intronic
CAediting_219446	chr2_158470719_+	ncRNA_intronic
CAediting_219447	chr2_158470720_+	ncRNA_intronic
CAediting_219448	chr2_158470746_+	ncRNA_intronic
CAediting_219449	chr2_158470748_+	ncRNA_intronic
CAediting_219450	chr2_158470753_+	ncRNA_intronic
CAediting_219451	chr2_158470761_+	ncRNA_intronic
CAediting_219452	chr2_158470768_+	ncRNA_intronic
CAediting_219453	chr2_158470787_+	ncRNA_intronic
CAediting_219454	chr2_158470795_+	ncRNA_intronic
CAediting_219455	chr2_158470833_+	ncRNA_intronic
CAediting_219456	chr2_158470834_+	ncRNA_intronic
CAediting_219457	chr2_158470835_+	ncRNA_intronic
CAediting_219458	chr2_158470837_+	ncRNA_intronic
CAediting_219459	chr2_158470858_+	ncRNA_intronic
CAediting_219460	chr2_158470871_+	ncRNA_intronic
CAediting_219461	chr2_158470916_+	ncRNA_intronic
CAediting_219462	chr2_158472297_+	ncRNA_intronic
CAediting_219463	chr2_158474643_+	ncRNA_intronic
CAediting_219464	chr2_158474644_+	ncRNA_intronic
CAediting_219465	chr2_158474843_+	ncRNA_intronic
CAediting_219466	chr2_158474859_+	ncRNA_intronic
CAediting_219467	chr2_158474862_+	ncRNA_intronic
CAediting_219468	chr2_158474867_+	ncRNA_intronic
CAediting_219469	chr2_158474870_+	ncRNA_intronic
CAediting_219470	chr2_158474898_+	ncRNA_intronic
CAediting_219471	chr2_158474927_+	ncRNA_intronic
CAediting_219472	chr2_158474938_+	ncRNA_intronic
CAediting_219473	chr2_158474948_+	ncRNA_intronic
CAediting_219474	chr2_158474949_+	ncRNA_intronic
CAediting_219475	chr2_158474953_+	ncRNA_intronic
CAediting_219476	chr2_158474963_+	ncRNA_intronic
CAediting_219477	chr2_158474966_+	ncRNA_intronic
CAediting_219478	chr2_158474976_+	ncRNA_intronic
CAediting_219479	chr2_158474992_+	ncRNA_intronic
CAediting_219480	chr2_158474997_+	ncRNA_intronic
CAediting_219481	chr2_158475003_+	ncRNA_intronic
CAediting_219482	chr2_158475058_+	ncRNA_intronic
CAediting_219483	chr2_158475061_+	ncRNA_intronic
CAediting_219484	chr2_158475136_+	ncRNA_intronic
CAediting_219485	chr2_158476364_+	ncRNA_intronic
CAediting_219486	chr2_158476400_+	ncRNA_intronic
CAediting_219487	chr2_158476405_+	ncRNA_intronic
CAediting_219488	chr2_158476411_+	ncRNA_intronic
CAediting_219489	chr2_158476460_+	ncRNA_intronic
CAediting_219490	chr2_158476480_+	ncRNA_intronic
CAediting_219491	chr2_158476545_+	ncRNA_intronic
CAediting_219492	chr2_158476566_+	ncRNA_intronic
CAediting_219493	chr2_158477724_+	ncRNA_intronic
CAediting_219494	chr2_158477725_+	ncRNA_intronic
CAediting_219495	chr2_158477747_+	ncRNA_intronic
CAediting_219496	chr2_158477751_+	ncRNA_intronic
CAediting_219497	chr2_158477760_+	ncRNA_intronic
CAediting_219498	chr2_158480260_+	ncRNA_intronic
CAediting_219499	chr2_158480268_+	ncRNA_intronic
CAediting_219500	chr2_158481162_+	ncRNA_intronic
CAediting_219501	chr2_158481171_+	ncRNA_intronic
CAediting_219502	chr2_158482349_+	ncRNA_intronic
CAediting_219503	chr2_158482401_+	ncRNA_intronic
CAediting_219504	chr2_158482559_+	ncRNA_intronic
CAediting_219505	chr2_158482560_+	ncRNA_intronic
CAediting_219506	chr2_158482563_+	ncRNA_intronic
CAediting_219507	chr2_158482597_+	ncRNA_intronic
CAediting_219508	chr2_158482602_+	ncRNA_intronic
CAediting_219509	chr2_158482603_+	ncRNA_intronic
CAediting_219510	chr2_158482613_+	ncRNA_intronic
CAediting_219511	chr2_158482630_+	ncRNA_intronic
CAediting_219512	chr2_158482634_+	ncRNA_intronic
CAediting_219513	chr2_158482671_+	ncRNA_intronic
CAediting_219514	chr2_158482680_+	ncRNA_intronic
CAediting_219515	chr2_158482686_+	ncRNA_intronic
CAediting_219516	chr2_158482689_+	ncRNA_intronic
CAediting_219517	chr2_158482715_+	ncRNA_intronic
CAediting_219518	chr2_158491819_+	ncRNA_intronic
CAediting_219519	chr2_158491827_+	ncRNA_intronic
CAediting_219520	chr2_158491870_+	ncRNA_intronic
CAediting_219521	chr2_158494964_+	ncRNA_intronic
CAediting_219522	chr2_158494977_+	ncRNA_intronic
CAediting_219523	chr2_158495035_+	ncRNA_intronic
CAediting_219524	chr2_158495098_+	ncRNA_intronic
CAediting_219525	chr2_158495193_+	ncRNA_intronic
CAediting_219526	chr2_158495574_+	ncRNA_intronic
CAediting_219527	chr2_158495580_+	ncRNA_intronic
CAediting_219528	chr2_158495581_+	ncRNA_intronic
CAediting_219529	chr2_158495633_+	ncRNA_intronic
CAediting_219530	chr2_158495648_+	ncRNA_intronic
CAediting_219531	chr2_158495700_+	ncRNA_intronic
CAediting_219532	chr2_158495713_+	ncRNA_intronic
CAediting_219533	chr2_158495714_+	ncRNA_intronic
CAediting_219534	chr2_158495775_+	ncRNA_intronic
CAediting_219535	chr2_158495791_+	ncRNA_intronic
CAediting_219536	chr2_158496050_+	ncRNA_intronic
CAediting_219537	chr2_158496055_+	ncRNA_intronic
CAediting_219538	chr2_158496060_+	ncRNA_intronic
CAediting_219539	chr2_158496084_+	ncRNA_intronic
CAediting_219540	chr2_158496190_+	ncRNA_intronic
CAediting_219541	chr2_158496241_+	ncRNA_intronic
CAediting_219542	chr2_158496243_+	ncRNA_intronic
CAediting_219543	chr2_158508234_+	ncRNA_intronic
CAediting_219544	chr2_158508245_+	ncRNA_intronic
CAediting_219545	chr2_158508271_+	ncRNA_intronic
CAediting_219546	chr2_158508285_+	ncRNA_intronic
CAediting_219547	chr2_158508286_+	ncRNA_intronic
CAediting_219548	chr2_158508315_+	ncRNA_intronic
CAediting_219549	chr2_158508321_+	ncRNA_intronic
CAediting_219550	chr2_158508354_+	ncRNA_intronic
CAediting_219551	chr2_158508355_+	ncRNA_intronic
CAediting_219552	chr2_158511186_+	ncRNA_intronic
CAediting_219553	chr2_158514821_+	ncRNA_intronic
CAediting_219554	chr2_158515439_+	ncRNA_intronic
CAediting_219555	chr2_158515784_+	ncRNA_intronic
CAediting_219556	chr2_158515790_+	ncRNA_intronic
CAediting_219557	chr2_158515791_+	ncRNA_intronic
CAediting_219558	chr2_158515836_+	ncRNA_intronic
CAediting_219559	chr2_158515844_+	ncRNA_intronic
CAediting_219560	chr2_158515986_+	ncRNA_intronic
CAediting_219561	chr2_158516708_+	ncRNA_intronic
CAediting_219562	chr2_158516723_+	ncRNA_intronic
CAediting_219563	chr2_158516923_+	ncRNA_intronic
CAediting_219564	chr2_158517857_+	ncRNA_intronic
CAediting_219565	chr2_158535463_+	ncRNA_intronic
CAediting_219566	chr2_158535571_+	ncRNA_intronic
CAediting_219567	chr2_158537772_+	ncRNA_intronic
CAediting_219568	chr2_158537818_+	ncRNA_intronic
CAediting_219569	chr2_158537870_+	ncRNA_intronic
CAediting_219570	chr2_158537887_+	ncRNA_intronic
CAediting_219571	chr2_158537932_+	ncRNA_intronic
CAediting_219572	chr2_158537937_+	ncRNA_intronic
CAediting_219573	chr2_158537961_+	ncRNA_intronic
CAediting_219574	chr2_158537962_+	ncRNA_intronic
CAediting_219575	chr2_158538001_+	ncRNA_intronic
CAediting_219576	chr2_158538004_+	ncRNA_intronic
CAediting_219577	chr2_158538583_+	ncRNA_intronic
CAediting_219578	chr2_158538614_+	ncRNA_intronic
CAediting_219579	chr2_158538676_+	ncRNA_intronic
CAediting_219580	chr2_158538703_+	ncRNA_intronic
CAediting_219581	chr2_158538722_+	ncRNA_intronic
CAediting_219582	chr2_158597876_+	ncRNA_intronic
CAediting_219583	chr2_158597938_+	ncRNA_intronic
CAediting_219584	chr2_158598648_+	ncRNA_intronic
CAediting_219585	chr2_158606293_+	ncRNA_intronic
CAediting_219586	chr2_158613472_+	ncRNA_intronic
CAediting_219587	chr2_158621513_+	intronic
CAediting_219588	chr2_158621626_+	intronic
CAediting_219589	chr2_158621631_+	intronic
CAediting_219590	chr2_158621648_+	intronic
CAediting_219591	chr2_158621703_+	intronic
CAediting_219592	chr2_158623193_+	intronic
CAediting_219593	chr2_158623195_+	intronic
CAediting_219594	chr2_158623203_+	intronic
CAediting_219595	chr2_158623225_+	intronic
CAediting_219596	chr2_158623304_+	intronic
CAediting_219597	chr2_158623320_+	intronic
CAediting_219598	chr2_158623322_+	intronic
CAediting_219599	chr2_158623403_+	intronic
CAediting_219600	chr2_158623417_+	intronic
CAediting_219601	chr2_158623418_+	intronic
CAediting_219602	chr2_158623421_+	intronic
CAediting_219603	chr2_158641063_+	intronic
CAediting_219604	chr2_158641112_+	intronic
CAediting_219605	chr2_158641131_+	intronic
CAediting_219606	chr2_158641136_+	intronic
CAediting_219607	chr2_158641231_+	intronic
CAediting_219608	chr2_158641259_+	intronic
CAediting_219609	chr2_158642072_+	intronic
CAediting_219610	chr2_158642207_+	intronic
CAediting_219611	chr2_158642259_+	intronic
CAediting_219612	chr2_158643433_+	ncRNA_intronic
CAediting_219613	chr2_158643434_+	ncRNA_intronic
CAediting_219614	chr2_158643447_+	ncRNA_intronic
CAediting_219615	chr2_158643455_+	ncRNA_intronic
CAediting_219616	chr2_158643456_+	ncRNA_intronic
CAediting_219617	chr2_158643461_+	ncRNA_intronic
CAediting_219618	chr2_158643474_+	ncRNA_intronic
CAediting_219619	chr2_158643478_+	ncRNA_intronic
CAediting_219620	chr2_158643482_+	ncRNA_intronic
CAediting_219621	chr2_158643485_+	ncRNA_intronic
CAediting_219622	chr2_158643491_+	ncRNA_intronic
CAediting_219623	chr2_158643496_+	ncRNA_intronic
CAediting_219624	chr2_158643510_+	ncRNA_intronic
CAediting_219625	chr2_158643516_+	ncRNA_intronic
CAediting_219626	chr2_158643524_+	ncRNA_intronic
CAediting_219627	chr2_158643525_+	ncRNA_intronic
CAediting_219628	chr2_158643527_+	ncRNA_intronic
CAediting_219629	chr2_158643529_+	ncRNA_intronic
CAediting_219630	chr2_158643538_+	ncRNA_intronic
CAediting_219631	chr2_158643550_+	ncRNA_intronic
CAediting_219632	chr2_158643551_+	ncRNA_intronic
CAediting_219633	chr2_158643552_+	ncRNA_intronic
CAediting_219634	chr2_158643553_+	ncRNA_intronic
CAediting_219635	chr2_158643555_+	ncRNA_intronic
CAediting_219636	chr2_158643556_+	ncRNA_intronic
CAediting_219637	chr2_158643565_+	ncRNA_intronic
CAediting_219638	chr2_158643581_+	ncRNA_intronic
CAediting_219639	chr2_158643597_+	ncRNA_intronic
CAediting_219640	chr2_158643601_+	ncRNA_intronic
CAediting_219641	chr2_158643608_+	ncRNA_intronic
CAediting_219642	chr2_158643614_+	ncRNA_intronic
CAediting_219643	chr2_158643618_+	ncRNA_intronic
CAediting_219644	chr2_158643627_+	ncRNA_intronic
CAediting_219645	chr2_158643631_+	ncRNA_intronic
CAediting_219646	chr2_158643632_+	ncRNA_intronic
CAediting_219647	chr2_158643653_+	ncRNA_intronic
CAediting_219648	chr2_158643669_+	ncRNA_intronic
CAediting_219649	chr2_158643725_+	ncRNA_intronic
CAediting_219650	chr2_158643785_+	ncRNA_intronic
CAediting_219651	chr2_158643809_+	ncRNA_intronic
CAediting_219652	chr2_158643827_+	ncRNA_intronic
CAediting_219653	chr2_158643835_+	ncRNA_intronic
CAediting_219654	chr2_158643840_+	ncRNA_intronic
CAediting_219655	chr2_158643845_+	ncRNA_intronic
CAediting_219656	chr2_158643846_+	ncRNA_intronic
CAediting_219657	chr2_158643866_+	ncRNA_intronic
CAediting_219658	chr2_158643883_+	ncRNA_intronic
CAediting_219659	chr2_158643895_+	ncRNA_intronic
CAediting_219660	chr2_158643896_+	ncRNA_intronic
CAediting_219661	chr2_158643907_+	ncRNA_intronic
CAediting_219662	chr2_158643927_+	ncRNA_intronic
CAediting_219663	chr2_158643949_+	ncRNA_intronic
CAediting_219664	chr2_158643951_+	ncRNA_intronic
CAediting_219665	chr2_158643957_+	ncRNA_intronic
CAediting_219666	chr2_158643975_+	ncRNA_intronic
CAediting_219667	chr2_158643987_+	ncRNA_intronic
CAediting_219668	chr2_158644000_+	ncRNA_intronic
CAediting_219669	chr2_158644018_+	ncRNA_intronic
CAediting_219670	chr2_158644027_+	ncRNA_intronic
CAediting_219671	chr2_158644028_+	ncRNA_intronic
CAediting_219672	chr2_158648737_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_219391	chr2_158466495_+	SINE	Alu	AluSx1
CAediting_219392	chr2_158466584_+	SINE	Alu	AluSx1
CAediting_219393	chr2_158466620_+	SINE	Alu	AluSx1
CAediting_219394	chr2_158467431_+	SINE	Alu	AluJb
CAediting_219395	chr2_158467445_+	SINE	Alu	AluJb
CAediting_219396	chr2_158467449_+	SINE	Alu	AluJb
CAediting_219397	chr2_158467472_+	SINE	Alu	AluJb
CAediting_219398	chr2_158467591_+	SINE	Alu	AluJr4
CAediting_219399	chr2_158467596_+	SINE	Alu	AluJr4
CAediting_219400	chr2_158467613_+	SINE	Alu	AluJr4
CAediting_219401	chr2_158467621_+	SINE	Alu	AluJr4
CAediting_219402	chr2_158467626_+	SINE	Alu	AluJr4
CAediting_219403	chr2_158467637_+	SINE	Alu	AluJr4
CAediting_219404	chr2_158467644_+	SINE	Alu	AluJr4
CAediting_219405	chr2_158467645_+	SINE	Alu	AluJr4
CAediting_219406	chr2_158467650_+	SINE	Alu	AluJr4
CAediting_219407	chr2_158467656_+	SINE	Alu	AluJr4
CAediting_219408	chr2_158467664_+	SINE	Alu	AluJr4
CAediting_219409	chr2_158467700_+	SINE	Alu	AluJr4
CAediting_219410	chr2_158467744_+	SINE	Alu	AluJr4
CAediting_219411	chr2_158467767_+	SINE	Alu	AluJr4
CAediting_219412	chr2_158467772_+	SINE	Alu	AluJr4
CAediting_219413	chr2_158467786_+	SINE	Alu	AluJr4
CAediting_219414	chr2_158468803_+	SINE	Alu	AluJr
CAediting_219415	chr2_158468914_+	SINE	Alu	AluJr
CAediting_219416	chr2_158469219_+	SINE	Alu	AluSx
CAediting_219424	chr2_158470530_+	LINE	L1	L1MCb
CAediting_219425	chr2_158470531_+	LINE	L1	L1MCb
CAediting_219426	chr2_158470537_+	LINE	L1	L1MCb
CAediting_219427	chr2_158470538_+	LINE	L1	L1MCb
CAediting_219428	chr2_158470546_+	LINE	L1	L1MCb
CAediting_219429	chr2_158470551_+	LINE	L1	L1MCb
CAediting_219430	chr2_158470560_+	LINE	L1	L1MCb
CAediting_219431	chr2_158470563_+	LINE	L1	L1MCb
CAediting_219432	chr2_158470618_+	LINE	L1	L1MCb
CAediting_219433	chr2_158470619_+	LINE	L1	L1MCb
CAediting_219434	chr2_158470626_+	LINE	L1	L1MCb
CAediting_219435	chr2_158470627_+	LINE	L1	L1MCb
CAediting_219436	chr2_158470628_+	LINE	L1	L1MCb
CAediting_219437	chr2_158470639_+	LINE	L1	L1MCb
CAediting_219438	chr2_158470654_+	LINE	L1	L1MCb
CAediting_219439	chr2_158470680_+	LINE	L1	L1MCb
CAediting_219440	chr2_158470683_+	LINE	L1	L1MCb
CAediting_219441	chr2_158470684_+	LINE	L1	L1MCb
CAediting_219442	chr2_158470690_+	LINE	L1	L1MCb
CAediting_219443	chr2_158470708_+	LINE	L1	L1MCb
CAediting_219444	chr2_158470711_+	LINE	L1	L1MCb
CAediting_219445	chr2_158470712_+	LINE	L1	L1MCb
CAediting_219446	chr2_158470719_+	LINE	L1	L1MCb
CAediting_219447	chr2_158470720_+	LINE	L1	L1MCb
CAediting_219462	chr2_158472297_+	LINE	L1	L1MA8
CAediting_219471	chr2_158474927_+	LINE	L1	L1MCc
CAediting_219472	chr2_158474938_+	LINE	L1	L1MCc
CAediting_219473	chr2_158474948_+	LINE	L1	L1MCc
CAediting_219474	chr2_158474949_+	LINE	L1	L1MCc
CAediting_219475	chr2_158474953_+	LINE	L1	L1MCc
CAediting_219476	chr2_158474963_+	LINE	L1	L1MCc
CAediting_219477	chr2_158474966_+	LINE	L1	L1MCc
CAediting_219478	chr2_158474976_+	LINE	L1	L1MCc
CAediting_219479	chr2_158474992_+	LINE	L1	L1MCc
CAediting_219480	chr2_158474997_+	LINE	L1	L1MCc
CAediting_219481	chr2_158475003_+	LINE	L1	L1MCc
CAediting_219482	chr2_158475058_+	LINE	L1	L1MCc
CAediting_219483	chr2_158475061_+	LINE	L1	L1MCc
CAediting_219485	chr2_158476364_+	SINE	Alu	AluJr
CAediting_219486	chr2_158476400_+	SINE	Alu	AluJr
CAediting_219487	chr2_158476405_+	SINE	Alu	AluJr
CAediting_219488	chr2_158476411_+	SINE	Alu	AluJr
CAediting_219489	chr2_158476460_+	SINE	Alu	AluJr
CAediting_219490	chr2_158476480_+	SINE	Alu	AluJr
CAediting_219491	chr2_158476545_+	SINE	Alu	AluJr
CAediting_219492	chr2_158476566_+	SINE	Alu	AluJr
CAediting_219493	chr2_158477724_+	SINE	Alu	FAM
CAediting_219494	chr2_158477725_+	SINE	Alu	FAM
CAediting_219495	chr2_158477747_+	SINE	Alu	FAM
CAediting_219496	chr2_158477751_+	SINE	Alu	FAM
CAediting_219497	chr2_158477760_+	SINE	Alu	FAM
CAediting_219498	chr2_158480260_+	SINE	Alu	AluSx1
CAediting_219499	chr2_158480268_+	SINE	Alu	AluSx1
CAediting_219500	chr2_158481162_+	SINE	Alu	FLAM_C
CAediting_219501	chr2_158481171_+	SINE	Alu	FLAM_C
CAediting_219502	chr2_158482349_+	SINE	Alu	FLAM_A
CAediting_219503	chr2_158482401_+	SINE	Alu	FLAM_A
CAediting_219504	chr2_158482559_+	SINE	Alu	AluJo
CAediting_219505	chr2_158482560_+	SINE	Alu	AluJo
CAediting_219506	chr2_158482563_+	SINE	Alu	AluJo
CAediting_219507	chr2_158482597_+	SINE	Alu	AluJo
CAediting_219508	chr2_158482602_+	SINE	Alu	AluJo
CAediting_219509	chr2_158482603_+	SINE	Alu	AluJo
CAediting_219510	chr2_158482613_+	SINE	Alu	AluJo
CAediting_219511	chr2_158482630_+	SINE	Alu	AluJo
CAediting_219512	chr2_158482634_+	SINE	Alu	AluJo
CAediting_219513	chr2_158482671_+	SINE	Alu	AluJo
CAediting_219514	chr2_158482680_+	SINE	Alu	AluJo
CAediting_219515	chr2_158482686_+	SINE	Alu	AluJo
CAediting_219516	chr2_158482689_+	SINE	Alu	AluJo
CAediting_219517	chr2_158482715_+	SINE	Alu	AluJo
CAediting_219518	chr2_158491819_+	SINE	Alu	AluJb
CAediting_219519	chr2_158491827_+	SINE	Alu	AluJb
CAediting_219520	chr2_158491870_+	SINE	Alu	AluJb
CAediting_219521	chr2_158494964_+	SINE	Alu	AluSx3
CAediting_219522	chr2_158494977_+	SINE	Alu	AluSx3
CAediting_219523	chr2_158495035_+	SINE	Alu	AluSx3
CAediting_219524	chr2_158495098_+	SINE	Alu	AluSx3
CAediting_219525	chr2_158495193_+	SINE	Alu	AluSx3
CAediting_219526	chr2_158495574_+	SINE	Alu	AluSx1
CAediting_219527	chr2_158495580_+	SINE	Alu	AluSx1
CAediting_219528	chr2_158495581_+	SINE	Alu	AluSx1
CAediting_219529	chr2_158495633_+	SINE	Alu	AluSx1
CAediting_219530	chr2_158495648_+	SINE	Alu	AluSx1
CAediting_219531	chr2_158495700_+	SINE	Alu	AluSx1
CAediting_219532	chr2_158495713_+	SINE	Alu	AluSx1
CAediting_219533	chr2_158495714_+	SINE	Alu	AluSx1
CAediting_219534	chr2_158495775_+	SINE	Alu	AluSx1
CAediting_219535	chr2_158495791_+	SINE	Alu	AluSx1
CAediting_219536	chr2_158496050_+	SINE	Alu	AluSz
CAediting_219537	chr2_158496055_+	SINE	Alu	AluSz
CAediting_219538	chr2_158496060_+	SINE	Alu	AluSz
CAediting_219539	chr2_158496084_+	SINE	Alu	AluSz
CAediting_219540	chr2_158496190_+	SINE	Alu	AluSz
CAediting_219541	chr2_158496241_+	SINE	Alu	AluSz
CAediting_219542	chr2_158496243_+	SINE	Alu	AluSz
CAediting_219543	chr2_158508234_+	SINE	Alu	AluSq2
CAediting_219544	chr2_158508245_+	SINE	Alu	AluSq2
CAediting_219545	chr2_158508271_+	SINE	Alu	AluSq2
CAediting_219546	chr2_158508285_+	SINE	Alu	AluSq2
CAediting_219547	chr2_158508286_+	SINE	Alu	AluSq2
CAediting_219548	chr2_158508315_+	SINE	Alu	AluSq2
CAediting_219549	chr2_158508321_+	SINE	Alu	AluSq2
CAediting_219550	chr2_158508354_+	SINE	Alu	AluSq2
CAediting_219551	chr2_158508355_+	SINE	Alu	AluSq2
CAediting_219552	chr2_158511186_+	SINE	Alu	AluSx
CAediting_219553	chr2_158514821_+	SINE	Alu	AluSx
CAediting_219554	chr2_158515439_+	SINE	Alu	FLAM_A
CAediting_219555	chr2_158515784_+	SINE	Alu	AluJr
CAediting_219556	chr2_158515790_+	SINE	Alu	AluJr
CAediting_219557	chr2_158515791_+	SINE	Alu	AluJr
CAediting_219558	chr2_158515836_+	SINE	Alu	AluJr
CAediting_219559	chr2_158515844_+	SINE	Alu	AluJr
CAediting_219560	chr2_158515986_+	SINE	Alu	AluJr
CAediting_219561	chr2_158516708_+	SINE	Alu	AluSq4
CAediting_219562	chr2_158516723_+	SINE	Alu	AluSq4
CAediting_219563	chr2_158516923_+	SINE	Alu	AluSq4
CAediting_219564	chr2_158517857_+	SINE	Alu	AluJb
CAediting_219565	chr2_158535463_+	SINE	Alu	AluJr
CAediting_219566	chr2_158535571_+	SINE	Alu	AluJr
CAediting_219567	chr2_158537772_+	SINE	Alu	AluJb
CAediting_219568	chr2_158537818_+	SINE	Alu	AluJb
CAediting_219569	chr2_158537870_+	SINE	Alu	AluJb
CAediting_219570	chr2_158537887_+	SINE	Alu	AluJb
CAediting_219571	chr2_158537932_+	SINE	Alu	AluJb
CAediting_219572	chr2_158537937_+	SINE	Alu	AluJb
CAediting_219573	chr2_158537961_+	SINE	Alu	AluJb
CAediting_219574	chr2_158537962_+	SINE	Alu	AluJb
CAediting_219575	chr2_158538001_+	SINE	Alu	AluJb
CAediting_219576	chr2_158538004_+	SINE	Alu	AluJb
CAediting_219577	chr2_158538583_+	SINE	Alu	AluSx1
CAediting_219578	chr2_158538614_+	SINE	Alu	AluSx1
CAediting_219579	chr2_158538676_+	SINE	Alu	AluSx1
CAediting_219580	chr2_158538703_+	SINE	Alu	AluSx1
CAediting_219581	chr2_158538722_+	SINE	Alu	AluSx1
CAediting_219582	chr2_158597876_+	SINE	Alu	AluJo
CAediting_219583	chr2_158597938_+	SINE	Alu	AluJo
CAediting_219584	chr2_158598648_+	SINE	Alu	AluY
CAediting_219585	chr2_158606293_+	SINE	Alu	AluYc
CAediting_219586	chr2_158613472_+	DNA	hAT-Charlie	MER5B
CAediting_219587	chr2_158621513_+	SINE	Alu	AluSx1
CAediting_219588	chr2_158621626_+	SINE	Alu	AluSx1
CAediting_219589	chr2_158621631_+	SINE	Alu	AluSx1
CAediting_219590	chr2_158621648_+	SINE	Alu	AluSx1
CAediting_219591	chr2_158621703_+	SINE	Alu	AluSx1
CAediting_219592	chr2_158623193_+	SINE	Alu	AluJr4
CAediting_219593	chr2_158623195_+	SINE	Alu	AluJr4
CAediting_219594	chr2_158623203_+	SINE	Alu	AluJr4
CAediting_219595	chr2_158623225_+	SINE	Alu	AluJr4
CAediting_219596	chr2_158623304_+	SINE	Alu	AluJr4
CAediting_219597	chr2_158623320_+	SINE	Alu	AluJr4
CAediting_219598	chr2_158623322_+	SINE	Alu	AluJr4
CAediting_219599	chr2_158623403_+	SINE	Alu	AluJr4
CAediting_219600	chr2_158623417_+	SINE	Alu	AluJr4
CAediting_219601	chr2_158623418_+	SINE	Alu	AluJr4
CAediting_219602	chr2_158623421_+	SINE	Alu	AluJr4
CAediting_219603	chr2_158641063_+	SINE	Alu	AluSx
CAediting_219604	chr2_158641112_+	SINE	Alu	AluSx
CAediting_219605	chr2_158641131_+	SINE	Alu	AluSx
CAediting_219606	chr2_158641136_+	SINE	Alu	AluSx
CAediting_219607	chr2_158641231_+	SINE	Alu	AluSx
CAediting_219608	chr2_158641259_+	SINE	Alu	AluSx
CAediting_219609	chr2_158642072_+	SINE	Alu	AluSz
CAediting_219610	chr2_158642207_+	SINE	Alu	AluSz
CAediting_219611	chr2_158642259_+	SINE	Alu	AluSz
CAediting_219612	chr2_158643433_+	SINE	Alu	AluJr
CAediting_219613	chr2_158643434_+	SINE	Alu	AluJr
CAediting_219614	chr2_158643447_+	SINE	Alu	AluJr
CAediting_219615	chr2_158643455_+	SINE	Alu	AluJr
CAediting_219616	chr2_158643456_+	SINE	Alu	AluJr
CAediting_219617	chr2_158643461_+	SINE	Alu	AluJr
CAediting_219618	chr2_158643474_+	SINE	Alu	AluJr
CAediting_219619	chr2_158643478_+	SINE	Alu	AluJr
CAediting_219620	chr2_158643482_+	SINE	Alu	AluJr
CAediting_219621	chr2_158643485_+	SINE	Alu	AluJr
CAediting_219622	chr2_158643491_+	SINE	Alu	AluJr
CAediting_219623	chr2_158643496_+	SINE	Alu	AluJr
CAediting_219624	chr2_158643510_+	SINE	Alu	AluJr
CAediting_219625	chr2_158643516_+	SINE	Alu	AluJr
CAediting_219626	chr2_158643524_+	SINE	Alu	AluJr
CAediting_219627	chr2_158643525_+	SINE	Alu	AluJr
CAediting_219628	chr2_158643527_+	SINE	Alu	AluJr
CAediting_219629	chr2_158643529_+	SINE	Alu	AluJr
CAediting_219630	chr2_158643538_+	SINE	Alu	AluJr
CAediting_219631	chr2_158643550_+	SINE	Alu	AluJr
CAediting_219632	chr2_158643551_+	SINE	Alu	AluJr
CAediting_219633	chr2_158643552_+	SINE	Alu	AluJr
CAediting_219634	chr2_158643553_+	SINE	Alu	AluJr
CAediting_219635	chr2_158643555_+	SINE	Alu	AluJr
CAediting_219636	chr2_158643556_+	SINE	Alu	AluJr
CAediting_219637	chr2_158643565_+	SINE	Alu	AluJr
CAediting_219638	chr2_158643581_+	SINE	Alu	AluJr
CAediting_219639	chr2_158643597_+	SINE	Alu	AluJr
CAediting_219640	chr2_158643601_+	SINE	Alu	AluJr
CAediting_219641	chr2_158643608_+	SINE	Alu	AluJr
CAediting_219642	chr2_158643614_+	SINE	Alu	AluJr
CAediting_219643	chr2_158643618_+	SINE	Alu	AluJr
CAediting_219644	chr2_158643627_+	SINE	Alu	AluJr
CAediting_219645	chr2_158643631_+	SINE	Alu	AluJr
CAediting_219646	chr2_158643632_+	SINE	Alu	AluJr
CAediting_219647	chr2_158643653_+	SINE	Alu	AluJr
CAediting_219648	chr2_158643669_+	SINE	Alu	AluJr
CAediting_219649	chr2_158643725_+	SINE	Alu	AluJr
CAediting_219650	chr2_158643785_+	SINE	Alu	AluSx
CAediting_219651	chr2_158643809_+	SINE	Alu	AluSx
CAediting_219652	chr2_158643827_+	SINE	Alu	AluSx
CAediting_219653	chr2_158643835_+	SINE	Alu	AluSx
CAediting_219654	chr2_158643840_+	SINE	Alu	AluSx
CAediting_219655	chr2_158643845_+	SINE	Alu	AluSx
CAediting_219656	chr2_158643846_+	SINE	Alu	AluSx
CAediting_219657	chr2_158643866_+	SINE	Alu	AluSx
CAediting_219658	chr2_158643883_+	SINE	Alu	AluSx
CAediting_219659	chr2_158643895_+	SINE	Alu	AluSx
CAediting_219660	chr2_158643896_+	SINE	Alu	AluSx
CAediting_219661	chr2_158643907_+	SINE	Alu	AluSx
CAediting_219662	chr2_158643927_+	SINE	Alu	AluSx
CAediting_219663	chr2_158643949_+	SINE	Alu	AluSx
CAediting_219664	chr2_158643951_+	SINE	Alu	AluSx
CAediting_219665	chr2_158643957_+	SINE	Alu	AluSx
CAediting_219666	chr2_158643975_+	SINE	Alu	AluSx
CAediting_219667	chr2_158643987_+	SINE	Alu	AluSx
CAediting_219668	chr2_158644000_+	SINE	Alu	AluSx
CAediting_219669	chr2_158644018_+	SINE	Alu	AluSx
CAediting_219670	chr2_158644027_+	SINE	Alu	AluSx
CAediting_219671	chr2_158644028_+	SINE	Alu	AluSx
CAediting_219672	chr2_158648737_+	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for PKP4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000144283.20.PKP4.

Correlation between RNA A-to-I editing and PSI for ENSG00000144283.20.PKP4.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PKP4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PKP4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PKP4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000144283.20	ENST00000426248	hsa-miR-200b-3p	158634268	158634274	7mer-m8	158634254	158634275	162	-16.81
CAediting_393	chr1_1167164_+	ENSG00000144283.20	ENST00000389757	hsa-miR-200b-3p	158681920	158681927	8mer-1a	158681906	158681927	154	-17.21
CAediting_393	chr1_1167164_+	ENSG00000144283.20	ENST00000389757	hsa-miR-200b-3p	158682708	158682714	7mer-m8	158682694	158682715	167	-20.44
CAediting_393	chr1_1167164_+	ENSG00000144283.20	ENST00000452162	hsa-miR-200b-3p	158621346	158621352	7mer-m8	158621333	158621353	146	-15.27
CAediting_393	chr1_1167164_+	ENSG00000144283.20	ENST00000452162	hsa-miR-200b-3p	158634268	158634274	7mer-m8	158634254	158634275	162	-16.81
CAediting_393	chr1_1167164_+	ENSG00000144283.20	ENST00000421462	hsa-miR-200b-3p	158634268	158634274	7mer-m8	158634254	158634275	162	-16.81
CAediting_86358	chr1_109598906_+	ENSG00000144283.20	ENST00000426248	hsa-miR-197-5p	158625401	158625408	8mer-1a	158625386	158625408	141	-15.57
CAediting_524911	chr7_5495852_-	ENSG00000144283.20	ENST00000426248	hsa-miR-589-3p	158634136	158634143	8mer-1a	158634119	158634143	146	-14.64
CAediting_524911	chr7_5495852_-	ENSG00000144283.20	ENST00000426248	hsa-miR-589-3p	158669810	158669816	7mer-m8	158669792	158669817	153	-20.98
CAediting_117844	chr1_162342605_+	ENSG00000144283.20	ENST00000426248	hsa-miR-556-3p	158673726	158673732	7mer-m8	158673712	158673733	155	-12.45
CAediting_86358	chr1_109598906_+	ENSG00000144283.20	ENST00000389757	hsa-miR-197-5p	158682007	158682013	7mer-m8	158681992	158682014	156	-22.38
CAediting_442554	chr5_154685830_+	ENSG00000144283.20	ENST00000389757	hsa-miR-1303	158682758	158682764	7mer-m8	158682743	158682765	149	-15.87
CAediting_604450	chr7_133034877_-	ENSG00000144283.20	ENST00000452162	hsa-miR-3654	158621033	158621039	7mer-m8	158621022	158621040	150	-24.25
CAediting_86358	chr1_109598906_+	ENSG00000144283.20	ENST00000452162	hsa-miR-197-5p	158625401	158625408	8mer-1a	158625386	158625408	141	-15.57
CAediting_524911	chr7_5495852_-	ENSG00000144283.20	ENST00000452162	hsa-miR-589-3p	158634136	158634143	8mer-1a	158634119	158634143	146	-14.64
CAediting_86358	chr1_109598906_+	ENSG00000144283.20	ENST00000421462	hsa-miR-197-5p	158625401	158625408	8mer-1a	158625386	158625408	141	-15.57
CAediting_524911	chr7_5495852_-	ENSG00000144283.20	ENST00000421462	hsa-miR-589-3p	158634136	158634143	8mer-1a	158634119	158634143	146	-14.64
CAediting_86358	chr1_109598906_+	ENSG00000144283.20	ENST00000481115	hsa-miR-197-5p	158625401	158625408	8mer-1a	158625386	158625408	141	-15.57

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000144283.20	ENST00000389757	hsa-miR-1285-5p	158681565	158681571	7mer-m8	158681552	158681572	141	-9.68

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PKP4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for PKP4

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PKP4

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_219644	chr2_158643627_+	0.014268793214404	-0.598710942961581
STAD	pathologic_stage	CAediting_219656	chr2_158643846_+	0.00547497227568224	0.295393971285634

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Relation with survival for PKP4

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PKP4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PKP4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene