|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: AJUBA (CAeditome ID:84962) |
Gene summary for AJUBA |
Gene summary |
Gene information | Gene symbol | AJUBA | Gene ID | 84962 |
Gene name | ajuba LIM protein | |
Synonyms | JUB | |
Cytomap | 14q11.2 | |
Type of gene | protein-coding | |
Description | LIM domain-containing protein ajubajub, ajuba homolog | |
Modification date | 20210518 | |
UniProtAcc | Q96IF1 | |
Context | - 33640888(Knockout of Ajuba Attenuates the Growth and Migration of Hepatocellular Carcinoma Cells) |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
AJUBA | GO:0031334 | LIM domain-containing protein ajuba | 15870274 |
AJUBA | GO:0003714 | LIM domain-containing protein ajuba | 18805794 |
AJUBA | GO:0045294 | LIM domain-containing protein ajuba | 12417594 |
AJUBA | GO:0001666 | LIM domain-containing protein ajuba | 22286099 |
AJUBA | GO:0035331 | LIM domain-containing protein ajuba | 20303269 |
AJUBA | GO:1900037 | LIM domain-containing protein ajuba | 22286099 |
AJUBA | GO:0000932 | LIM domain-containing protein ajuba | 20616046 |
AJUBA | GO:0005634 | LIM domain-containing protein ajuba | 18805794 |
AJUBA | GO:0005654 | LIM domain-containing protein ajuba | 0000052 |
AJUBA | GO:0005794 | LIM domain-containing protein ajuba | 0000052 |
AJUBA | GO:0005829 | LIM domain-containing protein ajuba | 0000052 |
AJUBA | GO:0005911 | LIM domain-containing protein ajuba | 12417594 |
Top |
RNA A-to-I events for AJUBA |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000129474.14 |
RNA A-to-I editing events in Cancer. |
CAediting_977816(22971511, -), CAediting_977817(22971526, -), CAediting_977818(22971541, -), CAediting_977819(22972152, -), CAediting_977820(22972156, -), CAediting_977821(22972157, -), CAediting_977822(22972171, -), CAediting_977823(22972182, -), CAediting_977824(22972191, -), CAediting_977825(22972200, -), CAediting_977826(22972202, -), CAediting_977827(22972204, -), CAediting_977828(22972208, -), CAediting_977829(22972212, -), CAediting_977830(22972217, -), CAediting_977831(22972230, -), CAediting_977832(22972235, -), CAediting_977833(22972241, -), CAediting_977834(22972242, -), CAediting_977835(22972251, -), CAediting_977836(22972269, -), CAediting_977837(22972276, -), CAediting_977838(22972288, -), CAediting_977839(22972289, -), CAediting_977840(22972291, -), CAediting_977841(22972294, -), CAediting_977842(22972846, -), CAediting_977843(22972865, -), CAediting_977844(22972867, -), CAediting_977845(22972873, -), CAediting_977846(22972894, -), CAediting_977847(22972895, -), CAediting_977848(22972901, -), CAediting_977849(22972907, -), CAediting_977850(22972910, -), CAediting_977851(22972911, -), CAediting_977852(22972913, -), CAediting_977853(22972916, -), CAediting_977854(22972920, -), CAediting_977855(22972921, -), CAediting_977856(22972926, -), CAediting_977857(22972932, -), CAediting_977858(22972936, -), CAediting_977859(22972941, -), CAediting_977860(22972947, -), CAediting_977861(22972991, -), CAediting_977862(22973027, -), CAediting_977863(22973028, -), CAediting_977864(22973048, -), CAediting_977865(22973049, -), CAediting_977866(22973050, -), CAediting_977867(22973063, -), CAediting_977868(22973071, -), CAediting_977869(22973074, -), CAediting_977870(22973096, -), CAediting_977871(22973110, -), CAediting_977872(22973113, -), CAediting_977873(22973127, -), CAediting_977874(22975616, -), CAediting_977875(22975617, -), CAediting_977876(22975618, -), CAediting_977877(22975693, -), CAediting_977878(22975696, -), |
Top |
RNA editing positional annotations for AJUBA using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_977816 | chr14_22971511_- | UTR3 |
CAediting_977817 | chr14_22971526_- | UTR3 |
CAediting_977818 | chr14_22971541_- | UTR3 |
CAediting_977819 | chr14_22972152_- | UTR3 |
CAediting_977820 | chr14_22972156_- | UTR3 |
CAediting_977821 | chr14_22972157_- | UTR3 |
CAediting_977822 | chr14_22972171_- | UTR3 |
CAediting_977823 | chr14_22972182_- | splicing |
CAediting_977824 | chr14_22972191_- | UTR3 |
CAediting_977825 | chr14_22972200_- | UTR3 |
CAediting_977826 | chr14_22972202_- | UTR3 |
CAediting_977827 | chr14_22972204_- | UTR3 |
CAediting_977828 | chr14_22972208_- | UTR3 |
CAediting_977829 | chr14_22972212_- | UTR3 |
CAediting_977830 | chr14_22972217_- | UTR3 |
CAediting_977831 | chr14_22972230_- | UTR3 |
CAediting_977832 | chr14_22972235_- | UTR3 |
CAediting_977833 | chr14_22972241_- | UTR3 |
CAediting_977834 | chr14_22972242_- | UTR3 |
CAediting_977835 | chr14_22972251_- | UTR3 |
CAediting_977836 | chr14_22972269_- | UTR3 |
CAediting_977837 | chr14_22972276_- | UTR3 |
CAediting_977838 | chr14_22972288_- | UTR3 |
CAediting_977839 | chr14_22972289_- | UTR3 |
CAediting_977840 | chr14_22972291_- | UTR3 |
CAediting_977841 | chr14_22972294_- | UTR3 |
CAediting_977842 | chr14_22972846_- | UTR3 |
CAediting_977843 | chr14_22972865_- | UTR3 |
CAediting_977844 | chr14_22972867_- | UTR3 |
CAediting_977845 | chr14_22972873_- | UTR3 |
CAediting_977846 | chr14_22972894_- | UTR3 |
CAediting_977847 | chr14_22972895_- | UTR3 |
CAediting_977848 | chr14_22972901_- | UTR3 |
CAediting_977849 | chr14_22972907_- | UTR3 |
CAediting_977850 | chr14_22972910_- | UTR3 |
CAediting_977851 | chr14_22972911_- | UTR3 |
CAediting_977852 | chr14_22972913_- | UTR3 |
CAediting_977853 | chr14_22972916_- | UTR3 |
CAediting_977854 | chr14_22972920_- | UTR3 |
CAediting_977855 | chr14_22972921_- | UTR3 |
CAediting_977856 | chr14_22972926_- | UTR3 |
CAediting_977857 | chr14_22972932_- | UTR3 |
CAediting_977858 | chr14_22972936_- | UTR3 |
CAediting_977859 | chr14_22972941_- | UTR3 |
CAediting_977860 | chr14_22972947_- | UTR3 |
CAediting_977861 | chr14_22972991_- | UTR3 |
CAediting_977862 | chr14_22973027_- | UTR3 |
CAediting_977863 | chr14_22973028_- | UTR3 |
CAediting_977864 | chr14_22973048_- | UTR3 |
CAediting_977865 | chr14_22973049_- | UTR3 |
CAediting_977866 | chr14_22973050_- | UTR3 |
CAediting_977867 | chr14_22973063_- | UTR3 |
CAediting_977868 | chr14_22973071_- | UTR3 |
CAediting_977869 | chr14_22973074_- | UTR3 |
CAediting_977870 | chr14_22973096_- | UTR3 |
CAediting_977871 | chr14_22973110_- | UTR3 |
CAediting_977872 | chr14_22973113_- | UTR3 |
CAediting_977873 | chr14_22973127_- | UTR3 |
CAediting_977874 | chr14_22975616_- | intronic |
CAediting_977875 | chr14_22975617_- | intronic |
CAediting_977876 | chr14_22975618_- | intronic |
CAediting_977877 | chr14_22975693_- | intronic |
CAediting_977878 | chr14_22975696_- | intronic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_977862 | chr14_22973027_- | SINE | Alu | FLAM_C |
CAediting_977863 | chr14_22973028_- | SINE | Alu | FLAM_C |
CAediting_977864 | chr14_22973048_- | SINE | Alu | FLAM_C |
CAediting_977865 | chr14_22973049_- | SINE | Alu | FLAM_C |
CAediting_977866 | chr14_22973050_- | SINE | Alu | FLAM_C |
CAediting_977867 | chr14_22973063_- | SINE | Alu | FLAM_C |
CAediting_977868 | chr14_22973071_- | SINE | Alu | FLAM_C |
CAediting_977869 | chr14_22973074_- | SINE | Alu | FLAM_C |
CAediting_977870 | chr14_22973096_- | SINE | Alu | FLAM_C |
CAediting_977871 | chr14_22973110_- | SINE | Alu | FLAM_C |
CAediting_977872 | chr14_22973113_- | SINE | Alu | FLAM_C |
CAediting_977873 | chr14_22973127_- | SINE | Alu | FLAM_C |
CAediting_977874 | chr14_22975616_- | SINE | Alu | AluYf1 |
CAediting_977875 | chr14_22975617_- | SINE | Alu | AluYf1 |
CAediting_977876 | chr14_22975618_- | SINE | Alu | AluYf1 |
CAediting_977877 | chr14_22975693_- | SINE | Alu | AluYf1 |
CAediting_977878 | chr14_22975696_- | SINE | Alu | AluYf1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for AJUBA |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
IR | CAediting_977823 | chr14_22972182_- | 22972178:22972200 | 3SS | 0+2i | ACTGATTTGATACTAGTCAGTTT | -2.63 | ACTGATTTGATACTAGTCGGTTT | -10.58 |
IR | CAediting_977824 | chr14_22972191_- | 22972178:22972200 | 3SS | 0+11i | ACTGATTTGATACTAGTCAGTTT | -2.63 | ACTGATTTGGTACTAGTCAGTTT | -2.42 |
IR | CAediting_977825 | chr14_22972200_- | 22972178:22972200 | 3SS | 0+20i | ACTGATTTGATACTAGTCAGTTT | -2.63 | GCTGATTTGATACTAGTCAGTTT | -3.75 |
IR | CAediting_977854 | chr14_22972920_- | 22972918:22972926 | 5SS | 0+4i | AGCTAAACT | -13.29 | AGCTAAGCT | -19.89 |
IR | CAediting_977855 | chr14_22972921_- | 22972918:22972926 | 5SS | 0+3i | AGCTAAACT | -13.29 | AGCTAGACT | -17 |
IR | CAediting_977856 | chr14_22972926_- | 22972918:22972926 | 5SS | 3+0i | AGCTAAACT | -13.29 | GGCTAAACT | -14.28 |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000129474.14.AJUBA. |
Correlation between RNA A-to-I editing and PSI for ENSG00000129474.14.AJUBA. |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for AJUBA |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
Top |
Protein coding region RNA A-to-I editings for AJUBA |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for AJUBA |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_977821 | chr14_22972157_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1301-5p | 22972154 | 22972160 | 7mer-m8 | 22972153 | 22972171 | 145.00 | -13.97 |
CAediting_977821 | chr14_22972157_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3059-3p | 22972155 | 22972161 | 7mer-m8 | 22972154 | 22972174 | 146.00 | -16.43 |
CAediting_977821 | chr14_22972157_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6502-5p | 22972154 | 22972160 | 7mer-m8 | 22972153 | 22972175 | 149.00 | -14.75 |
CAediting_977821 | chr14_22972157_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-1301-5p | 22972154 | 22972160 | 7mer-m8 | 22972153 | 22972171 | 145.00 | -13.97 |
CAediting_977821 | chr14_22972157_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-3059-3p | 22972155 | 22972161 | 7mer-m8 | 22972154 | 22972174 | 146.00 | -16.43 |
CAediting_977821 | chr14_22972157_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-6502-5p | 22972154 | 22972160 | 7mer-m8 | 22972153 | 22972175 | 149.00 | -14.75 |
CAediting_977822 | chr14_22972171_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4474-5p | 22972167 | 22972173 | 7mer-m8 | 22972166 | 22972184 | 155.00 | -17.99 |
CAediting_977822 | chr14_22972171_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-513c-5p | 22972170 | 22972176 | 7mer-m8 | 22972169 | 22972191 | 147.00 | -12.04 |
CAediting_977822 | chr14_22972171_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514b-5p | 22972170 | 22972176 | 7mer-m8 | 22972169 | 22972191 | 145.00 | -12.46 |
CAediting_977823 | chr14_22972182_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1537-3p | 22972178 | 22972183 | 6mer | 22972177 | 22972198 | 140.00 | -16.31 |
CAediting_977823 | chr14_22972182_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6510-3p | 22972180 | 22972186 | 7mer-m8 | 22972179 | 22972198 | 145.00 | -14.00 |
CAediting_977830 | chr14_22972217_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4267 | 22972212 | 22972219 | 8mer-1a | 22972212 | 22972227 | 140.00 | -15.00 |
CAediting_977830 | chr14_22972217_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6736-3p | 22972214 | 22972220 | 7mer-m8 | 22972213 | 22972233 | 161.00 | -23.87 |
CAediting_977831 | chr14_22972230_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4328 | 22972230 | 22972236 | 7mer-m8 | 22972229 | 22972245 | 140.00 | -14.56 |
CAediting_977831 | chr14_22972230_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-508-5p | 22972226 | 22972232 | 7mer-m8 | 22972225 | 22972247 | 140.00 | -16.41 |
CAediting_977832 | chr14_22972235_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-148b-5p | 22972230 | 22972237 | 8mer-1a | 22972230 | 22972251 | 144.00 | -9.06 |
CAediting_977832 | chr14_22972235_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4314 | 22972233 | 22972240 | 8mer-1a | 22972233 | 22972249 | 145.00 | -13.12 |
CAediting_977832 | chr14_22972235_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-619-5p | 22972234 | 22972241 | 8mer-1a | 22972234 | 22972256 | 149.00 | -17.22 |
CAediting_977832 | chr14_22972235_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6506-5p | 22972234 | 22972241 | 8mer-1a | 22972234 | 22972256 | 151.00 | -15.41 |
CAediting_977832 | chr14_22972235_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6874-3p | 22972230 | 22972237 | 8mer-1a | 22972230 | 22972252 | 157.00 | -11.18 |
CAediting_977834 | chr14_22972242_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-638 | 22972236 | 22972243 | 8mer-1a | 22972236 | 22972259 | 152.00 | -27.05 |
CAediting_977836 | chr14_22972269_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1470 | 22972264 | 22972270 | 7mer-m8 | 22972263 | 22972283 | 140.00 | -18.05 |
CAediting_977841 | chr14_22972294_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-665 | 22972293 | 22972298 | 6mer | 22972292 | 22972311 | 142.00 | -21.99 |
CAediting_977842 | chr14_22972846_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3130-3p | 22972841 | 22972847 | 7mer-m8 | 22972840 | 22972860 | 146.00 | -18.51 |
CAediting_977842 | chr14_22972846_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3130-3p | 22972841 | 22972847 | 7mer-m8 | 22972840 | 22972860 | 146.00 | -18.51 |
CAediting_977847 | chr14_22972895_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-15b-3p | 22972891 | 22972896 | 6mer | 22972890 | 22972911 | 140.00 | -8.88 |
CAediting_977847 | chr14_22972895_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-216b-3p | 22972894 | 22972901 | 8mer-1a | 22972894 | 22972917 | 140.00 | -10.00 |
CAediting_977848 | chr14_22972901_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-29a-5p | 22972900 | 22972907 | 8mer-1a | 22972900 | 22972924 | 157.00 | -14.48 |
CAediting_977848 | chr14_22972901_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4714-5p | 22972898 | 22972904 | 7mer-m8 | 22972897 | 22972914 | 146.00 | -11.53 |
CAediting_977850 | chr14_22972910_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1301-5p | 22972909 | 22972915 | 7mer-m8 | 22972908 | 22972926 | 147.00 | -14.07 |
CAediting_977850 | chr14_22972910_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6502-5p | 22972909 | 22972915 | 7mer-m8 | 22972908 | 22972930 | 163.00 | -17.87 |
CAediting_977850 | chr14_22972910_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6822-3p | 22972907 | 22972914 | 8mer-1a | 22972907 | 22972929 | 156.00 | -14.57 |
CAediting_977850 | chr14_22972910_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-8057 | 22972906 | 22972913 | 8mer-1a | 22972906 | 22972929 | 152.00 | -18.32 |
CAediting_977851 | chr14_22972911_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-133a-3p | 22972905 | 22972912 | 8mer-1a | 22972905 | 22972926 | 146.00 | -17.14 |
CAediting_977851 | chr14_22972911_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-133a-3p | 22972905 | 22972912 | 8mer-1a | 22972905 | 22972926 | 146.00 | -17.14 |
CAediting_977851 | chr14_22972911_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-133b | 22972905 | 22972912 | 8mer-1a | 22972905 | 22972926 | 146.00 | -17.24 |
CAediting_977851 | chr14_22972911_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-7975 | 22972910 | 22972916 | 7mer-m8 | 22972909 | 22972926 | 150.00 | -15.10 |
CAediting_977853 | chr14_22972916_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1287-3p | 22972910 | 22972917 | 8mer-1a | 22972910 | 22972934 | 146.00 | -13.51 |
CAediting_977853 | chr14_22972916_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4676-5p | 22972913 | 22972920 | 8mer-1a | 22972913 | 22972937 | 153.00 | -19.39 |
CAediting_977853 | chr14_22972916_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-575 | 22972913 | 22972920 | 8mer-1a | 22972913 | 22972931 | 153.00 | -16.62 |
CAediting_977855 | chr14_22972921_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-622 | 22972916 | 22972922 | 7mer-1a | 22972916 | 22972937 | 145.00 | -23.73 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-9900 | 22972947 | 22972953 | 7mer-m8 | 22972946 | 22972966 | 146.00 | -19.88 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-9900 | 22972947 | 22972953 | 7mer-m8 | 22972946 | 22972966 | 146.00 | -19.88 |
CAediting_977863 | chr14_22973028_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4284 | 22973023 | 22973030 | 8mer-1a | 22973023 | 22973040 | 143.00 | -15.61 |
CAediting_977863 | chr14_22973028_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-4284 | 22973023 | 22973030 | 8mer-1a | 22973023 | 22973040 | 143.00 | -15.61 |
CAediting_977864 | chr14_22973048_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3189-3p | 22973047 | 22973053 | 7mer-m8 | 22973046 | 22973065 | 145.00 | -19.31 |
CAediting_977864 | chr14_22973048_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6813-3p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 140.00 | -16.10 |
CAediting_977864 | chr14_22973048_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-3189-3p | 22973047 | 22973053 | 7mer-m8 | 22973046 | 22973065 | 145.00 | -19.31 |
CAediting_977864 | chr14_22973048_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-6813-3p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 140.00 | -16.10 |
CAediting_977866 | chr14_22973050_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6771-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973069 | 159.00 | -27.69 |
CAediting_977866 | chr14_22973050_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-6771-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973069 | 159.00 | -27.69 |
CAediting_977870 | chr14_22973096_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6849-3p | 22973095 | 22973101 | 7mer-m8 | 22973094 | 22973114 | 152.00 | -18.03 |
CAediting_977870 | chr14_22973096_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-6849-3p | 22973095 | 22973101 | 7mer-m8 | 22973094 | 22973114 | 152.00 | -18.03 |
CAediting_977871 | chr14_22973110_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-433-5p | 22973109 | 22973115 | 7mer-m8 | 22973108 | 22973131 | 162.00 | -22.65 |
CAediting_977871 | chr14_22973110_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-433-5p | 22973109 | 22973115 | 7mer-m8 | 22973108 | 22973131 | 162.00 | -22.65 |
CAediting_977824 | chr14_22972191_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-624-5p | 22972186 | 22972193 | 8mer-1a | 22972186 | 22972207 | 156.00 | -18.20 |
CAediting_977826 | chr14_22972202_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1251-3p | 22972200 | 22972207 | 8mer-1a | 22972200 | 22972221 | 160.00 | -23.81 |
CAediting_977826 | chr14_22972202_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-520f-3p | 22972198 | 22972204 | 7mer-m8 | 22972197 | 22972222 | 147.00 | -18.87 |
CAediting_977827 | chr14_22972204_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6828-3p | 22972202 | 22972209 | 8mer-1a | 22972202 | 22972223 | 169.00 | -27.94 |
CAediting_977828 | chr14_22972208_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4313 | 22972205 | 22972212 | 8mer-1a | 22972205 | 22972229 | 148.00 | -25.27 |
CAediting_977833 | chr14_22972241_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3199 | 22972236 | 22972243 | 8mer-1a | 22972236 | 22972258 | 148.00 | -17.75 |
CAediting_977833 | chr14_22972241_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3199 | 22972236 | 22972243 | 8mer-1a | 22972236 | 22972258 | 148.00 | -17.75 |
CAediting_977833 | chr14_22972241_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4679 | 22972241 | 22972247 | 7mer-m8 | 22972240 | 22972261 | 148.00 | -13.33 |
CAediting_977833 | chr14_22972241_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4679 | 22972241 | 22972247 | 7mer-m8 | 22972240 | 22972261 | 148.00 | -13.33 |
CAediting_977833 | chr14_22972241_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-8052 | 22972236 | 22972243 | 8mer-1a | 22972236 | 22972255 | 159.00 | -21.79 |
CAediting_977838 | chr14_22972288_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-2114-3p | 22972283 | 22972290 | 8mer-1a | 22972283 | 22972302 | 156.00 | -17.60 |
CAediting_977838 | chr14_22972288_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6819-3p | 22972285 | 22972291 | 7mer-m8 | 22972284 | 22972304 | 142.00 | -15.88 |
CAediting_977838 | chr14_22972288_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6823-3p | 22972283 | 22972290 | 8mer-1a | 22972283 | 22972303 | 152.00 | -21.30 |
CAediting_977838 | chr14_22972288_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6877-3p | 22972285 | 22972291 | 7mer-m8 | 22972284 | 22972304 | 146.00 | -18.15 |
CAediting_977840 | chr14_22972291_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-2115-5p | 22972286 | 22972292 | 7mer-m8 | 22972285 | 22972306 | 143.00 | -15.44 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4292 | 22972864 | 22972870 | 7mer-m8 | 22972863 | 22972880 | 140.00 | -16.97 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-548as-3p | 22972860 | 22972866 | 7mer-m8 | 22972859 | 22972880 | 140.00 | -11.99 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6732-3p | 22972862 | 22972868 | 7mer-m8 | 22972861 | 22972883 | 140.00 | -11.13 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6791-5p | 22972864 | 22972870 | 7mer-m8 | 22972863 | 22972885 | 158.00 | -30.14 |
CAediting_977845 | chr14_22972873_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-637 | 22972872 | 22972879 | 8mer-1a | 22972872 | 22972895 | 148.00 | -20.58 |
CAediting_977846 | chr14_22972894_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-146a-5p | 22972889 | 22972895 | 7mer-m8 | 22972888 | 22972909 | 149.00 | -12.64 |
CAediting_977846 | chr14_22972894_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-146b-5p | 22972889 | 22972895 | 7mer-m8 | 22972888 | 22972910 | 149.00 | -12.16 |
CAediting_977846 | chr14_22972894_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-7153-5p | 22972889 | 22972895 | 7mer-m8 | 22972888 | 22972908 | 152.00 | -15.05 |
CAediting_977861 | chr14_22972991_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-7973 | 22972986 | 22972992 | 7mer-m8 | 22972985 | 22973004 | 162.00 | -20.78 |
CAediting_977861 | chr14_22972991_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-7973 | 22972986 | 22972992 | 7mer-m8 | 22972985 | 22973004 | 162.00 | -20.78 |
CAediting_977861 | chr14_22972991_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-7973 | 22972986 | 22972992 | 7mer-m8 | 22972985 | 22973004 | 162.00 | -20.78 |
CAediting_977861 | chr14_22972991_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-7973 | 22972986 | 22972992 | 7mer-m8 | 22972985 | 22973004 | 162.00 | -20.78 |
CAediting_977862 | chr14_22973027_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6761-3p | 22973026 | 22973032 | 7mer-m8 | 22973025 | 22973050 | 150.00 | -21.73 |
CAediting_977862 | chr14_22973027_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-6761-3p | 22973026 | 22973032 | 7mer-m8 | 22973025 | 22973050 | 150.00 | -21.73 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3192-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973067 | 156.00 | -25.88 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-326 | 22973047 | 22973053 | 7mer-m8 | 22973046 | 22973065 | 140.00 | -14.14 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-330-5p | 22973047 | 22973053 | 7mer-m8 | 22973046 | 22973067 | 140.00 | -21.34 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4314 | 22973048 | 22973054 | 7mer-m8 | 22973047 | 22973070 | 141.00 | -20.38 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 154.00 | -19.44 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 154.00 | -19.44 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 154.00 | -19.44 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-3192-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973067 | 156.00 | -25.88 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-326 | 22973047 | 22973053 | 7mer-m8 | 22973046 | 22973065 | 140.00 | -14.14 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-330-5p | 22973047 | 22973053 | 7mer-m8 | 22973046 | 22973067 | 140.00 | -21.34 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-4314 | 22973048 | 22973054 | 7mer-m8 | 22973047 | 22973070 | 141.00 | -20.38 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-514a-5p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 154.00 | -19.44 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-514a-5p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 154.00 | -19.44 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-514a-5p | 22973046 | 22973052 | 7mer-m8 | 22973045 | 22973065 | 154.00 | -19.44 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3619-3p | 22973068 | 22973074 | 7mer-m8 | 22973067 | 22973089 | 147.00 | -20.29 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4751 | 22973066 | 22973072 | 7mer-m8 | 22973065 | 22973088 | 150.00 | -22.82 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-3619-3p | 22973068 | 22973074 | 7mer-m8 | 22973067 | 22973089 | 147.00 | -20.29 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-4751 | 22973066 | 22973072 | 7mer-m8 | 22973065 | 22973088 | 150.00 | -22.82 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-515-5p | 22973123 | 22973129 | 7mer-m8 | 22973122 | 22973144 | 163.00 | -15.19 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-515-5p | 22973123 | 22973129 | 7mer-m8 | 22973122 | 22973144 | 163.00 | -15.19 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-519d-5p | 22973123 | 22973130 | 8mer-1a | 22973123 | 22973147 | 149.00 | -12.75 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-519e-5p | 22973123 | 22973129 | 7mer-m8 | 22973122 | 22973142 | 155.00 | -13.92 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5695 | 22973123 | 22973129 | 7mer-1a | 22973123 | 22973143 | 141.00 | -13.88 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-515-5p | 22973123 | 22973129 | 7mer-m8 | 22973122 | 22973144 | 163.00 | -15.19 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-515-5p | 22973123 | 22973129 | 7mer-m8 | 22973122 | 22973144 | 163.00 | -15.19 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-519d-5p | 22973123 | 22973130 | 8mer-1a | 22973123 | 22973147 | 149.00 | -12.75 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-519e-5p | 22973123 | 22973129 | 7mer-m8 | 22973122 | 22973142 | 155.00 | -13.92 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-5695 | 22973123 | 22973129 | 7mer-1a | 22973123 | 22973143 | 141.00 | -13.88 |
CAediting_977819 | chr14_22972152_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5586-5p | 22972149 | 22972155 | 7mer-m8 | 22972148 | 22972173 | 151.00 | -14.74 |
CAediting_977819 | chr14_22972152_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-5586-5p | 22972149 | 22972155 | 7mer-m8 | 22972148 | 22972173 | 151.00 | -14.74 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_977836 | chr14_22972269_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-12119 | 22972267 | 22972272 | 6mer | 22972266 | 22972289 | 141 | -26.93 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1298-5p | 22973071 | 22973077 | 7mer-m8 | 22973070 | 22973089 | 154 | -22.49 |
CAediting_977869 | chr14_22973074_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-1298-5p | 22973071 | 22973077 | 7mer-m8 | 22973070 | 22973089 | 154 | -22.49 |
CAediting_977850 | chr14_22972910_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-182-3p | 22972907 | 22972914 | 8mer-1a | 22972907 | 22972927 | 147 | -16.47 |
CAediting_977851 | chr14_22972911_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-182-3p | 22972907 | 22972914 | 8mer-1a | 22972907 | 22972927 | 147 | -16.47 |
CAediting_977852 | chr14_22972913_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-182-3p | 22972907 | 22972914 | 8mer-1a | 22972907 | 22972927 | 147 | -16.47 |
CAediting_977845 | chr14_22972873_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-193b-5p | 22972867 | 22972874 | 8mer-1a | 22972867 | 22972889 | 154 | -22.56 |
CAediting_977826 | chr14_22972202_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-19a-5p | 22972200 | 22972207 | 8mer-1a | 22972200 | 22972220 | 145 | -10.45 |
CAediting_977827 | chr14_22972204_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-19a-5p | 22972200 | 22972207 | 8mer-1a | 22972200 | 22972220 | 145 | -10.45 |
CAediting_977826 | chr14_22972202_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-19b-1-5p | 22972200 | 22972207 | 8mer-1a | 22972200 | 22972223 | 141 | -14.76 |
CAediting_977827 | chr14_22972204_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-19b-1-5p | 22972200 | 22972207 | 8mer-1a | 22972200 | 22972223 | 141 | -14.76 |
CAediting_977826 | chr14_22972202_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-19b-2-5p | 22972200 | 22972207 | 8mer-1a | 22972200 | 22972220 | 146 | -12.01 |
CAediting_977827 | chr14_22972204_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-19b-2-5p | 22972200 | 22972207 | 8mer-1a | 22972200 | 22972220 | 146 | -12.01 |
CAediting_977853 | chr14_22972916_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-223-3p | 22972915 | 22972921 | 7mer-m8 | 22972914 | 22972935 | 154 | -11.53 |
CAediting_977854 | chr14_22972920_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-223-3p | 22972915 | 22972921 | 7mer-m8 | 22972914 | 22972935 | 154 | -11.53 |
CAediting_977836 | chr14_22972269_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-2276-5p | 22972264 | 22972270 | 7mer-m8 | 22972263 | 22972284 | 151 | -17.1 |
CAediting_977857 | chr14_22972932_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3129-3p | 22972929 | 22972935 | 7mer-m8 | 22972928 | 22972949 | 144 | -9.17 |
CAediting_977844 | chr14_22972867_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3170 | 22972867 | 22972873 | 7mer-m8 | 22972866 | 22972886 | 147 | -17.86 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320a-3p | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972962 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320b | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972962 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320b | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972962 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320c | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972960 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320c | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972960 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320d | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972959 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320d | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972959 | 140 | -14.27 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-326 | 22972864 | 22972870 | 7mer-m8 | 22972863 | 22972882 | 140 | -12.78 |
CAediting_977844 | chr14_22972867_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-326 | 22972864 | 22972870 | 7mer-m8 | 22972863 | 22972882 | 140 | -12.78 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-330-5p | 22972864 | 22972870 | 7mer-m8 | 22972863 | 22972884 | 140 | -17.08 |
CAediting_977844 | chr14_22972867_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-330-5p | 22972864 | 22972870 | 7mer-m8 | 22972863 | 22972884 | 140 | -17.08 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3675-3p | 22973122 | 22973128 | 7mer-m8 | 22973121 | 22973142 | 149 | -14.89 |
CAediting_977830 | chr14_22972217_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3679-3p | 22972217 | 22972223 | 7mer-m8 | 22972216 | 22972235 | 154 | -21.52 |
CAediting_977837 | chr14_22972276_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3688-5p | 22972275 | 22972281 | 7mer-m8 | 22972274 | 22972295 | 146 | -13.3 |
CAediting_977837 | chr14_22972276_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3688-5p | 22972275 | 22972281 | 7mer-m8 | 22972274 | 22972295 | 146 | -13.3 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-382-3p | 22973070 | 22973076 | 7mer-m8 | 22973069 | 22973089 | 143 | -8.42 |
CAediting_977869 | chr14_22973074_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-382-3p | 22973070 | 22973076 | 7mer-m8 | 22973069 | 22973089 | 143 | -8.42 |
CAediting_977836 | chr14_22972269_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3921 | 22972266 | 22972272 | 7mer-m8 | 22972265 | 22972287 | 140 | -13.8 |
CAediting_977829 | chr14_22972212_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-3925-3p | 22972211 | 22972217 | 7mer-m8 | 22972210 | 22972232 | 150 | -19.32 |
CAediting_977836 | chr14_22972269_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4653-5p | 22972266 | 22972272 | 7mer-m8 | 22972265 | 22972284 | 142 | -16.92 |
CAediting_977867 | chr14_22973063_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-4761-5p | 22973058 | 22973064 | 7mer-m8 | 22973057 | 22973077 | 142 | -10.73 |
CAediting_977822 | chr14_22972171_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-498-5p | 22972170 | 22972177 | 8mer-1a | 22972170 | 22972192 | 148 | -14.64 |
CAediting_977833 | chr14_22972241_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5089-5p | 22972235 | 22972242 | 8mer-1a | 22972235 | 22972256 | 147 | -12.87 |
CAediting_977825 | chr14_22972200_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5094 | 22972195 | 22972201 | 7mer-m8 | 22972194 | 22972215 | 144 | -16.11 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22972863 | 22972869 | 7mer-m8 | 22972862 | 22972884 | 146 | -13.17 |
CAediting_977844 | chr14_22972867_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22972863 | 22972869 | 7mer-m8 | 22972862 | 22972884 | 146 | -13.17 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22972863 | 22972869 | 7mer-m8 | 22972862 | 22972884 | 146 | -13.17 |
CAediting_977844 | chr14_22972867_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22972863 | 22972869 | 7mer-m8 | 22972862 | 22972884 | 146 | -13.17 |
CAediting_977843 | chr14_22972865_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22972863 | 22972869 | 7mer-m8 | 22972862 | 22972884 | 146 | -13.17 |
CAediting_977844 | chr14_22972867_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-514a-5p | 22972863 | 22972869 | 7mer-m8 | 22972862 | 22972884 | 146 | -13.17 |
CAediting_977829 | chr14_22972212_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5195-3p | 22972212 | 22972218 | 7mer-m8 | 22972211 | 22972231 | 152 | -18.19 |
CAediting_977830 | chr14_22972217_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5195-3p | 22972212 | 22972218 | 7mer-m8 | 22972211 | 22972231 | 152 | -18.19 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-520f-5p | 22973123 | 22973130 | 8mer-1a | 22973123 | 22973144 | 149 | -10.73 |
CAediting_977857 | chr14_22972932_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5583-5p | 22972929 | 22972935 | 7mer-m8 | 22972928 | 22972949 | 140 | -5.99 |
CAediting_977857 | chr14_22972932_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5583-5p | 22972929 | 22972935 | 7mer-m8 | 22972928 | 22972949 | 140 | -5.99 |
CAediting_977831 | chr14_22972230_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-5684 | 22972226 | 22972232 | 7mer-m8 | 22972225 | 22972244 | 140 | -13.29 |
CAediting_977830 | chr14_22972217_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-584-3p | 22972214 | 22972220 | 7mer-m8 | 22972213 | 22972233 | 150 | -22.71 |
CAediting_977837 | chr14_22972276_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6134 | 22972272 | 22972278 | 7mer-m8 | 22972271 | 22972288 | 153 | -22.45 |
CAediting_977831 | chr14_22972230_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-618 | 22972225 | 22972231 | 7mer-m8 | 22972224 | 22972248 | 152 | -8.27 |
CAediting_977832 | chr14_22972235_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6513-5p | 22972234 | 22972241 | 8mer-1a | 22972234 | 22972256 | 150 | -15.87 |
CAediting_977849 | chr14_22972907_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-659-3p | 22972905 | 22972912 | 8mer-1a | 22972905 | 22972926 | 145 | -12.68 |
CAediting_977850 | chr14_22972910_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-659-3p | 22972905 | 22972912 | 8mer-1a | 22972905 | 22972926 | 145 | -12.68 |
CAediting_977851 | chr14_22972911_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-659-3p | 22972905 | 22972912 | 8mer-1a | 22972905 | 22972926 | 145 | -12.68 |
CAediting_977836 | chr14_22972269_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6761-5p | 22972267 | 22972274 | 8mer-1a | 22972267 | 22972288 | 141 | -19.73 |
CAediting_977837 | chr14_22972276_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6815-5p | 22972273 | 22972279 | 7mer-m8 | 22972272 | 22972294 | 147 | -19.86 |
CAediting_977827 | chr14_22972204_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6885-3p | 22972202 | 22972208 | 7mer-1a | 22972202 | 22972225 | 150 | -25.73 |
CAediting_977828 | chr14_22972208_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6885-3p | 22972202 | 22972208 | 7mer-1a | 22972202 | 22972225 | 150 | -25.73 |
CAediting_977828 | chr14_22972208_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-7106-3p | 22972205 | 22972212 | 8mer-1a | 22972205 | 22972229 | 147 | -25.39 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-887-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973068 | 147 | -14.04 |
CAediting_977866 | chr14_22973050_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-887-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973068 | 147 | -14.04 |
CAediting_977859 | chr14_22972941_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-9-3p | 22972940 | 22972947 | 8mer-1a | 22972940 | 22972961 | 152 | -11.74 |
CAediting_977859 | chr14_22972941_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-9-3p | 22972940 | 22972947 | 8mer-1a | 22972940 | 22972961 | 152 | -11.74 |
CAediting_977859 | chr14_22972941_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-9-3p | 22972940 | 22972947 | 8mer-1a | 22972940 | 22972961 | 152 | -11.74 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-1298-5p | 22973071 | 22973077 | 7mer-m8 | 22973070 | 22973089 | 154 | -22.49 |
CAediting_977869 | chr14_22973074_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-1298-5p | 22973071 | 22973077 | 7mer-m8 | 22973070 | 22973089 | 154 | -22.49 |
CAediting_977857 | chr14_22972932_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-3129-3p | 22972929 | 22972935 | 7mer-m8 | 22972928 | 22972949 | 144 | -9.17 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-320a-3p | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972962 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-320b | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972962 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-320b | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972962 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-320c | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972960 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-320c | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972960 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-320d | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972959 | 140 | -14.27 |
CAediting_977860 | chr14_22972947_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-320d | 22972941 | 22972947 | 7mer-1a | 22972941 | 22972959 | 140 | -14.27 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-3675-3p | 22973122 | 22973128 | 7mer-m8 | 22973121 | 22973142 | 149 | -14.89 |
CAediting_977868 | chr14_22973071_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-382-3p | 22973070 | 22973076 | 7mer-m8 | 22973069 | 22973089 | 143 | -8.42 |
CAediting_977869 | chr14_22973074_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-382-3p | 22973070 | 22973076 | 7mer-m8 | 22973069 | 22973089 | 143 | -8.42 |
CAediting_977867 | chr14_22973063_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-4761-5p | 22973058 | 22973064 | 7mer-m8 | 22973057 | 22973077 | 142 | -10.73 |
CAediting_977873 | chr14_22973127_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-520f-5p | 22973123 | 22973130 | 8mer-1a | 22973123 | 22973144 | 149 | -10.73 |
CAediting_977857 | chr14_22972932_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-5583-5p | 22972929 | 22972935 | 7mer-m8 | 22972928 | 22972949 | 140 | -5.99 |
CAediting_977857 | chr14_22972932_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-5583-5p | 22972929 | 22972935 | 7mer-m8 | 22972928 | 22972949 | 140 | -5.99 |
CAediting_977865 | chr14_22973049_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-887-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973068 | 147 | -14.04 |
CAediting_977866 | chr14_22973050_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-887-5p | 22973048 | 22973055 | 8mer-1a | 22973048 | 22973068 | 147 | -14.04 |
CAediting_977859 | chr14_22972941_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-9-3p | 22972940 | 22972947 | 8mer-1a | 22972940 | 22972961 | 152 | -11.74 |
CAediting_977859 | chr14_22972941_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-9-3p | 22972940 | 22972947 | 8mer-1a | 22972940 | 22972961 | 152 | -11.74 |
CAediting_977859 | chr14_22972941_- | ENSG00000129474.14 | ENST00000361265 | hsa-miR-9-3p | 22972940 | 22972947 | 8mer-1a | 22972940 | 22972961 | 152 | -11.74 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229413 | chr17_67471544_+ | ENSG00000129474.14 | ENST00000397388 | hsa-miR-548aa | 22972297 | 22972303 | 7mer-m8 | 22972296 | 22972319 | 146 | -14.73 |
CAediting_1368054 | chr19_46709310_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-320e | 22972618 | 22972624 | 7mer-m8 | 22972617 | 22972634 | 140 | -15.19 |
CAediting_228905 | chr2_188297554_+ | ENSG00000129474.14 | ENST00000397388 | hsa-miR-561-3p | 22972700 | 22972706 | 7mer-m8 | 22972699 | 22972720 | 147 | -16.82 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_228905 | chr2_188297554_+ | ENSG00000129474.14 | ENST00000397388 | hsa-miR-561-3p | 22971861 | 22971867 | 7mer-m8 | 22971860 | 22971882 | 146 | -4.95 |
CAediting_524911 | chr7_5495852_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-589-3p | 22972975 | 22972981 | 7mer-m8 | 22972974 | 22972997 | 148 | -16.45 |
CAediting_1351755 | chr19_40282625_- | ENSG00000129474.14 | ENST00000397388 | hsa-miR-641 | 22971891 | 22971897 | 7mer-m8 | 22971890 | 22971912 | 151 | -13.79 |
CAediting_580943 | chr7_100356700_+ | ENSG00000129474.14 | ENST00000397388 | hsa-miR-6840-3p | 22973080 | 22973086 | 7mer-m8 | 22973079 | 22973100 | 151 | -21.36 |
Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for AJUBA |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for AJUBA |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
LIHC | CAediting_977817 | chr14_22971526_- | 9.61703621023778e-05 | 0.364804747203158 | . | . | . | . |
LUAD | CAediting_977817 | chr14_22971526_- | 0.0385978375335037 | 0.227505523732559 | . | . | . | . |
KIRC | CAediting_977817 | chr14_22971526_- | . | . | . | . | 0.01700096433129 | 0.299747039577659 |
BLCA | CAediting_977818 | chr14_22971541_- | 1.67697932021302e-05 | 0.312310131688891 | . | . | . | . |
LIHC | CAediting_977818 | chr14_22971541_- | 5.45867866170136e-09 | 0.382953781624613 | . | . | . | . |
LUAD | CAediting_977818 | chr14_22971541_- | 1.54107362922028e-09 | 0.39462602573752 | . | . | . | . |
LUSC | CAediting_977818 | chr14_22971541_- | 1.43939086831324e-06 | 0.28942403196306 | . | . | 0.0117206779357761 | 0.153762697554158 |
HNSC | CAediting_977818 | chr14_22971541_- | 0.000197625637519225 | 0.193375768200721 | . | . | . | . |
UCEC | CAediting_977818 | chr14_22971541_- | 0.00504166374683038 | 0.26324947203664 | . | . | . | . |
BLCA | CAediting_977822 | chr14_22972171_- | 3.5632860772562e-07 | 0.501388149371483 | 0.0244129064552497 | 0.234561254904399 | . | . |
BRCA | CAediting_977822 | chr14_22972171_- | 1.82833848132307e-14 | 0.37405407526909 | . | . | . | . |
LIHC | CAediting_977822 | chr14_22972171_- | 1.46983978409737e-07 | 0.353874459705649 | . | . | . | . |
LUAD | CAediting_977822 | chr14_22972171_- | 2.28006465107526e-10 | 0.398515404225303 | . | . | . | . |
LUSC | CAediting_977822 | chr14_22972171_- | 0.00101663182430799 | 0.299973265178761 | . | . | 0.00154451900615089 | 0.289526679877408 |
HNSC | CAediting_977822 | chr14_22972171_- | 1.48300876899135e-08 | 0.439414770918279 | . | . | . | . |
STAD | CAediting_977822 | chr14_22972171_- | . | . | 0.0293957312157512 | 0.209695391772459 | . | . |
KIRC | CAediting_977822 | chr14_22972171_- | 8.26929339458153e-07 | 0.370528368882753 | . | . | . | . |
UCEC | CAediting_977822 | chr14_22972171_- | 0.00684407250063567 | 0.313893852555326 | . | . | 9.25714046685049e-05 | 0.44142984990991 |
OV | CAediting_977822 | chr14_22972171_- | 0.00184861568921177 | 0.237821768389098 | . | . | . | . |
PAAD | CAediting_977822 | chr14_22972171_- | 0.00331756307393897 | 0.358988788582343 | . | . | . | . |
BLCA | CAediting_977831 | chr14_22972230_- | 0.000346294973288699 | 0.189913584706553 | 0.00306313971011972 | 0.157636986867936 | . | . |
LGG | CAediting_977831 | chr14_22972230_- | . | . | . | . | 0.000900598899774615 | 0.227440343253042 |
BRCA | CAediting_977831 | chr14_22972230_- | 0.00265861361659634 | 0.0962750558212207 | . | . | . | . |
LIHC | CAediting_977831 | chr14_22972230_- | 8.16091388736664e-07 | 0.25405216154204 | . | . | . | . |
LUAD | CAediting_977831 | chr14_22972230_- | 6.73033842948215e-05 | 0.182204972077916 | . | . | . | . |
COAD | CAediting_977831 | chr14_22972230_- | 0.00208346734622387 | 0.172538260979055 | . | . | . | . |
LUSC | CAediting_977831 | chr14_22972230_- | 0.00163894616383176 | 0.144408374617284 | . | . | . | . |
HNSC | CAediting_977831 | chr14_22972230_- | 0.0413202520269797 | 0.0963323012664703 | . | . | . | . |
STAD | CAediting_977831 | chr14_22972230_- | . | . | 0.0150822763702301 | 0.14139190405467 | . | . |
THCA | CAediting_977831 | chr14_22972230_- | 0.00521727664343586 | 0.126523051791901 | . | . | . | . |
UCEC | CAediting_977831 | chr14_22972230_- | 0.00258138568001639 | 0.151238592806094 | . | . | . | . |
KIRP | CAediting_977831 | chr14_22972230_- | 0.0232756123157749 | 0.142059393469281 | . | . | . | . |
ACC | CAediting_977831 | chr14_22972230_- | 0.00290079519173691 | 0.397707194979085 | . | . | . | . |
ESCA | CAediting_977831 | chr14_22972230_- | . | . | 0.0391654491785924 | 0.172687937294478 | . | . |
OV | CAediting_977831 | chr14_22972230_- | 0.0159648040389159 | 0.12909800343819 | . | . | . | . |
SKCM | CAediting_977831 | chr14_22972230_- | . | . | 3.80038620512584e-05 | 0.232071755025659 | . | . |
UCS | CAediting_977831 | chr14_22972230_- | 0.0117449188356158 | 0.340541966508527 | . | . | . | . |
MESO | CAediting_977831 | chr14_22972230_- | . | . | 0.00736440561349117 | 0.292141106902467 | . | . |
SARC | CAediting_977831 | chr14_22972230_- | . | . | 0.000493469137308783 | 0.234044450978608 | . | . |
TGCT | CAediting_977831 | chr14_22972230_- | 2.83673911149476e-06 | 0.403295273189444 | . | . | . | . |
THYM | CAediting_977831 | chr14_22972230_- | . | . | 3.34469404652886e-05 | 0.382983810158185 | . | . |
BLCA | CAediting_977836 | chr14_22972269_- | . | . | 0.00767603594731146 | 0.365695121602674 | . | . |
BLCA | CAediting_977837 | chr14_22972276_- | 1.70735068926986e-05 | 0.32794857204805 | . | . | 0.0216665841423669 | 0.178673437898027 |
LIHC | CAediting_977837 | chr14_22972276_- | 0.000689825949933248 | 0.219831475425442 | . | . | . | . |
LUAD | CAediting_977837 | chr14_22972276_- | 0.00154530910604386 | 0.190042021985103 | . | . | . | . |
PAAD | CAediting_977837 | chr14_22972276_- | . | . | . | . | 0.0140375655526524 | 0.282569205444628 |
LIHC | CAediting_977842 | chr14_22972846_- | 0.0471908417559637 | 0.191424217390927 | . | . | . | . |
LUAD | CAediting_977842 | chr14_22972846_- | 0.027093624509102 | 0.24561659312112 | . | . | . | . |
BLCA | CAediting_977849 | chr14_22972907_- | 0.025696297477081 | 0.141369971215366 | . | . | . | . |
BLCA | CAediting_977857 | chr14_22972932_- | 0.00124687144522465 | 0.196175077864219 | . | . | . | . |
BRCA | CAediting_977857 | chr14_22972932_- | 1.51358318275389e-07 | 0.184569908412775 | . | . | . | . |
LIHC | CAediting_977857 | chr14_22972932_- | 9.87495574320243e-06 | 0.240279960315826 | . | . | . | . |
LUAD | CAediting_977857 | chr14_22972932_- | 0.000124398151807477 | 0.192367718635915 | . | . | . | . |
LUSC | CAediting_977857 | chr14_22972932_- | 0.000110908631484141 | 0.18181013081523 | . | . | . | . |
HNSC | CAediting_977857 | chr14_22972932_- | 0.00899831571957164 | 0.12482302491659 | . | . | . | . |
STAD | CAediting_977857 | chr14_22972932_- | 0.00716390004978438 | 0.161244559019631 | . | . | . | . |
THCA | CAediting_977857 | chr14_22972932_- | 0.0179690402901415 | 0.11597246694751 | . | . | . | . |
ESCA | CAediting_977857 | chr14_22972932_- | . | . | 0.0492690210444346 | 0.164171988433961 | . | . |
PAAD | CAediting_977857 | chr14_22972932_- | 0.00286612063014778 | 0.263548556784769 | . | . | . | . |
TGCT | CAediting_977857 | chr14_22972932_- | 9.97762913977949e-06 | 0.425893067905708 | . | . | . | . |
THYM | CAediting_977857 | chr14_22972932_- | 0.00974538171731041 | 0.282199815699346 | . | . | . | . |
BLCA | CAediting_977859 | chr14_22972941_- | 2.55001515069176e-09 | 0.314654223110732 | . | . | . | . |
LGG | CAediting_977859 | chr14_22972941_- | 0.00627812538819285 | 0.205845130784528 | . | . | . | . |
BRCA | CAediting_977859 | chr14_22972941_- | 9.72336519798472e-32 | 0.358415396973238 | . | . | . | . |
LIHC | CAediting_977859 | chr14_22972941_- | 2.27425495350544e-10 | 0.333302360029923 | . | . | . | . |
CESC | CAediting_977859 | chr14_22972941_- | 0.000284826951291101 | 0.212305216694369 | . | . | . | . |
LUAD | CAediting_977859 | chr14_22972941_- | 5.62725545542895e-16 | 0.355758131714268 | . | . | . | . |
COAD | CAediting_977859 | chr14_22972941_- | 2.43935301738878e-08 | 0.287532117214528 | 0.00243409171144797 | 0.158646459186999 | . | . |
LUSC | CAediting_977859 | chr14_22972941_- | 5.81977238592092e-13 | 0.318117542233473 | . | . | . | . |
GBM | CAediting_977859 | chr14_22972941_- | 0.000614058248305367 | 0.303392712902202 | . | . | . | . |
HNSC | CAediting_977859 | chr14_22972941_- | 3.97854335776814e-10 | 0.278799554721661 | . | . | . | . |
STAD | CAediting_977859 | chr14_22972941_- | 7.88021535844892e-06 | 0.24763762412715 | . | . | . | . |
THCA | CAediting_977859 | chr14_22972941_- | 1.31165065318238e-10 | 0.283862088175754 | . | . | . | . |
KIRC | CAediting_977859 | chr14_22972941_- | 0.000506007455782192 | 0.153006110850062 | . | . | . | . |
UCEC | CAediting_977859 | chr14_22972941_- | 2.76120869429047e-11 | 0.327224124265922 | . | . | . | . |
KIRP | CAediting_977859 | chr14_22972941_- | 2.65825024643612e-07 | 0.308666376994235 | . | . | . | . |
ESCA | CAediting_977859 | chr14_22972941_- | 0.0294606792735463 | 0.171123495613313 | 0.0409644154630347 | 0.16078191439476 | . | . |
OV | CAediting_977859 | chr14_22972941_- | 4.90292058589841e-07 | 0.261747451384959 | . | . | . | . |
PAAD | CAediting_977859 | chr14_22972941_- | 2.8724509241508e-06 | 0.362439776052784 | . | . | . | . |
SKCM | CAediting_977859 | chr14_22972941_- | 2.4404052173358e-10 | 0.361894216591442 | . | . | . | . |
UCS | CAediting_977859 | chr14_22972941_- | 0.00610452537605429 | 0.371911532847281 | . | . | . | . |
SARC | CAediting_977859 | chr14_22972941_- | 0.00308080618932791 | 0.227040449454919 | . | . | . | . |
TGCT | CAediting_977859 | chr14_22972941_- | 8.30466309862901e-14 | 0.638259836724599 | . | . | . | . |
THYM | CAediting_977859 | chr14_22972941_- | 2.06906271698389e-05 | 0.406207519169027 | . | . | . | . |
STAD | CAediting_977863 | chr14_22973028_- | . | . | 0.0174395908320467 | 0.227335628870451 | . | . |
Top |
Relation with cancer stages for AJUBA |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BLCA | pathologic_stage | CAediting_977831 | chr14_22972230_- | 0.00393036200857243 | 0.153991504403062 |
BLCA | pathologic_stage | CAediting_977849 | chr14_22972907_- | 0.0265252481082298 | 0.140879144903763 |
BLCA | pathologic_stage | CAediting_977852 | chr14_22972913_- | 1.74412544150759e-06 | 0.257751353394972 |
BLCA | pathologic_stage | CAediting_977857 | chr14_22972932_- | 0.0085550881988432 | 0.160620469775261 |
BLCA | pathologic_stage | CAediting_977859 | chr14_22972941_- | 1.26595081608528e-05 | 0.233996036633795 |
BRCA | pathologic_stage | CAediting_977831 | chr14_22972230_- | 0.0060771979221687 | 0.0887678803117694 |
BRCA | pathologic_stage | CAediting_977849 | chr14_22972907_- | 0.0289862591164185 | 0.0846227675205386 |
BRCA | pathologic_stage | CAediting_977859 | chr14_22972941_- | 0.00778843007597175 | 0.084874156574006 |
CESC | clinical_stage | CAediting_977831 | chr14_22972230_- | 0.00163808419825479 | -0.20180556548669 |
CESC | clinical_stage | CAediting_977849 | chr14_22972907_- | 0.0110217095381494 | -0.187525676976562 |
CESC | clinical_stage | CAediting_977852 | chr14_22972913_- | 2.25494619661773e-08 | -0.325848644008191 |
CESC | clinical_stage | CAediting_977857 | chr14_22972932_- | 0.0115530574192622 | -0.162782036450136 |
CESC | clinical_stage | CAediting_977859 | chr14_22972941_- | 0.000331714051383453 | -0.211865524956058 |
COAD | pathologic_stage | CAediting_977818 | chr14_22971541_- | 0.0382389550482165 | 0.28550353087266 |
COAD | pathologic_stage | CAediting_977859 | chr14_22972941_- | 0.0168340200214512 | 0.127157692801062 |
ESCA | clinical_stage | CAediting_977852 | chr14_22972913_- | 0.0236115127651573 | -0.310574432399001 |
HNSC | clinical_stage | CAediting_977831 | chr14_22972230_- | 0.000102389501056792 | 0.184974055728156 |
HNSC | clinical_stage | CAediting_977849 | chr14_22972907_- | 0.000286185022396065 | 0.178905705246229 |
HNSC | clinical_stage | CAediting_977852 | chr14_22972913_- | 0.00762863932426713 | 0.122929538133662 |
HNSC | clinical_stage | CAediting_977857 | chr14_22972932_- | 0.0307398392133281 | 0.104939430766547 |
HNSC | clinical_stage | CAediting_977859 | chr14_22972941_- | 0.00139423129012456 | 0.146693018361722 |
HNSC | pathologic_stage | CAediting_977818 | chr14_22971541_- | 0.00506913701881815 | 0.153941919831015 |
HNSC | pathologic_stage | CAediting_977831 | chr14_22972230_- | 1.0996915771404e-06 | 0.241098854023206 |
HNSC | pathologic_stage | CAediting_977837 | chr14_22972276_- | 0.0206666262003467 | 0.192038785126481 |
HNSC | pathologic_stage | CAediting_977849 | chr14_22972907_- | 9.7973554539703e-05 | 0.199538458906021 |
HNSC | pathologic_stage | CAediting_977852 | chr14_22972913_- | 0.00606150887218155 | 0.133552991936333 |
HNSC | pathologic_stage | CAediting_977857 | chr14_22972932_- | 0.000683985675435746 | 0.17145501441683 |
HNSC | pathologic_stage | CAediting_977859 | chr14_22972941_- | 3.77075767192128e-05 | 0.198494519709235 |
KIRC | pathologic_stage | CAediting_977822 | chr14_22972171_- | 0.0317995594359825 | 0.166725120813393 |
KIRC | pathologic_stage | CAediting_977831 | chr14_22972230_- | 1.17761166458518e-13 | 0.319416522617393 |
KIRC | pathologic_stage | CAediting_977837 | chr14_22972276_- | 0.0134436963766997 | 0.163494186415261 |
KIRC | pathologic_stage | CAediting_977849 | chr14_22972907_- | 9.11534918138204e-05 | 0.183605871486231 |
KIRC | pathologic_stage | CAediting_977852 | chr14_22972913_- | 7.76419441096897e-05 | 0.174747201662255 |
KIRC | pathologic_stage | CAediting_977857 | chr14_22972932_- | 1.1914095718635e-11 | 0.305761769350691 |
KIRC | pathologic_stage | CAediting_977859 | chr14_22972941_- | 1.62152674092555e-11 | 0.292196483988455 |
KIRP | clinical_stage | CAediting_977831 | chr14_22972230_- | 0.000411923835684335 | 0.262688651045827 |
KIRP | clinical_stage | CAediting_977857 | chr14_22972932_- | 0.000462494381341364 | 0.296224877831749 |
KIRP | clinical_stage | CAediting_977859 | chr14_22972941_- | 8.13644873062129e-07 | 0.355071189881522 |
KIRP | pathologic_stage | CAediting_977831 | chr14_22972230_- | 8.13332730058387e-05 | 0.256851723551149 |
KIRP | pathologic_stage | CAediting_977849 | chr14_22972907_- | 0.00483464913202696 | 0.202570865126138 |
KIRP | pathologic_stage | CAediting_977852 | chr14_22972913_- | 0.00901155147701966 | 0.168253975561342 |
KIRP | pathologic_stage | CAediting_977857 | chr14_22972932_- | 0.000153002633846859 | 0.283170540574297 |
KIRP | pathologic_stage | CAediting_977859 | chr14_22972941_- | 1.06412512016186e-08 | 0.357344477202931 |
LUAD | pathologic_stage | CAediting_977831 | chr14_22972230_- | 0.00011702517061064 | 0.177510802617316 |
LUAD | pathologic_stage | CAediting_977849 | chr14_22972907_- | 0.0461356252993271 | 0.106669115323638 |
LUAD | pathologic_stage | CAediting_977857 | chr14_22972932_- | 0.00605073957038069 | 0.13930678755536 |
LUAD | pathologic_stage | CAediting_977859 | chr14_22972941_- | 0.0025652852547657 | 0.137487548021535 |
LUSC | pathologic_stage | CAediting_977831 | chr14_22972230_- | 2.2665216241451e-07 | 0.236246018279836 |
LUSC | pathologic_stage | CAediting_977849 | chr14_22972907_- | 0.000688379241013908 | 0.160129525407085 |
LUSC | pathologic_stage | CAediting_977852 | chr14_22972913_- | 2.83940922599279e-05 | 0.188849778449091 |
LUSC | pathologic_stage | CAediting_977857 | chr14_22972932_- | 0.000151977301232861 | 0.178814997425069 |
LUSC | pathologic_stage | CAediting_977859 | chr14_22972941_- | 6.35257556141912e-07 | 0.223840164197957 |
PAAD | pathologic_stage | CAediting_977852 | chr14_22972913_- | 0.0161077955058045 | 0.198200600655543 |
PAAD | pathologic_stage | CAediting_977859 | chr14_22972941_- | 0.0134969602583487 | 0.196798404794843 |
SKCM | pathologic_stage | CAediting_977831 | chr14_22972230_- | 0.0289952808148189 | 0.134415642351695 |
TGCT | pathologic_stage | CAediting_977831 | chr14_22972230_- | 0.0346553558873422 | -0.270983452841276 |
TGCT | pathologic_stage | CAediting_977857 | chr14_22972932_- | 0.0102973692706045 | -0.366977461806254 |
TGCT | pathologic_stage | CAediting_977859 | chr14_22972941_- | 0.00247048523200255 | -0.422851876832362 |
THCA | pathologic_stage | CAediting_977822 | chr14_22972171_- | 0.0116706505126675 | 0.291729945765007 |
THCA | pathologic_stage | CAediting_977831 | chr14_22972230_- | 0.00158929744408374 | 0.143761536422005 |
THCA | pathologic_stage | CAediting_977837 | chr14_22972276_- | 0.043803568908275 | 0.144166564947702 |
THCA | pathologic_stage | CAediting_977849 | chr14_22972907_- | 0.0324408238239071 | 0.104024170852982 |
THCA | pathologic_stage | CAediting_977859 | chr14_22972941_- | 0.00243556690794526 | 0.136921848627234 |
UCEC | clinical_stage | CAediting_977863 | chr14_22973028_- | 0.0099041969064283 | -0.351281433789156 |
UCS | clinical_stage | CAediting_977831 | chr14_22972230_- | 0.0256630653047982 | -0.303537060233613 |
UCS | clinical_stage | CAediting_977859 | chr14_22972941_- | 0.0199658290433746 | -0.318847209274112 |
Top |
Relation with survival for AJUBA |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
CESC | CAediting_977871 | chr14_22973110_- | 0.00187881849871874 | 0.0026424 | 2.39118e+14 |
COAD | CAediting_977837 | chr14_22972276_- | 0.0124812625402976 | 0.0429693 | 5.457e-09 |
KIRC | CAediting_977857 | chr14_22972932_- | 0.0343459752648029 | 0.0278698 | 5.62411 |
UCEC | CAediting_977859 | chr14_22972941_- | 0.00503264969163231 | 0.0175646 | 5.71473 |
ESCA | CAediting_977831 | chr14_22972230_- | 0.00203069568234693 | 0.0168473 | 13.0307 |
OV | CAediting_977852 | chr14_22972913_- | 0.0141645510517057 | 0.0199594 | 5.70971 |
Top |
RelatedDrugs for AJUBA |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for AJUBA |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
AJUBA | C0279626 | Squamous cell carcinoma of esophagus | 1 | CTD_human |