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Editing gene: TNS4 (CAeditome ID:84951)

Gene summary for TNS4

Gene summary

Gene information	Gene symbol	TNS4
	Gene ID	84951
	Gene name	tensin 4
	Synonyms	CTEN\|PP14434
	Cytomap	17q21.2
	Type of gene	protein-coding
	Description	tensin-4C terminal tensin likeC-terminal tensin-like protein
	Modification date	20210518
	UniProtAcc	Q8IZW8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TNS4	GO:0008104	Tensin-4	17190795
TNS4	GO:0005925	Tensin-4	17190795

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RNA A-to-I events for TNS4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000131746.11

RNA A-to-I editing events in Cancer.

CAediting_1194104(40476599, -), CAediting_1194105(40476608, -), CAediting_1194106(40476620, -), CAediting_1194107(40476621, -), CAediting_1194108(40476644, -), CAediting_1194109(40476673, -), CAediting_1194110(40476682, -), CAediting_1194111(40476693, -), CAediting_1194112(40476697, -), CAediting_1194113(40476699, -), CAediting_1194114(40476702, -), CAediting_1194115(40476708, -), CAediting_1194116(40476716, -), CAediting_1194117(40476720, -), CAediting_1194118(40476735, -), CAediting_1194119(40476741, -), CAediting_1194120(40476751, -), CAediting_1194121(40476754, -), CAediting_1194122(40476755, -), CAediting_1194123(40476763, -), CAediting_1194124(40476776, -), CAediting_1194125(40476777, -), CAediting_1194126(40476780, -), CAediting_1194127(40476781, -), CAediting_1194128(40476794, -), CAediting_1194129(40476800, -), CAediting_1194130(40476801, -), CAediting_1194131(40476806, -), CAediting_1194132(40476812, -), CAediting_1194133(40476837, -), CAediting_1194134(40476841, -), CAediting_1194135(40476847, -), CAediting_1194136(40476859, -), CAediting_1194137(40476870, -), CAediting_1194138(40476876, -), CAediting_1194139(40479244, -), CAediting_1194140(40479259, -), CAediting_1194141(40479285, -), CAediting_1194142(40479292, -), CAediting_1194143(40481352, -), CAediting_1194144(40481462, -), CAediting_1194145(40481467, -), CAediting_1194146(40481476, -), CAediting_1194147(40481489, -), CAediting_1194148(40481502, -), CAediting_1194149(40481503, -), CAediting_1194150(40482487, -), CAediting_1194151(40482499, -), CAediting_1194152(40482514, -), CAediting_1194153(40482522, -), CAediting_1194154(40482526, -), CAediting_1194155(40482552, -), CAediting_1194156(40482561, -), CAediting_1194157(40482564, -), CAediting_1194158(40482576, -), CAediting_1194159(40482581, -), CAediting_1194160(40482650, -), CAediting_1194161(40482656, -), CAediting_1194162(40482666, -), CAediting_1194163(40482692, -), CAediting_1194164(40482695, -), CAediting_1194165(40482702, -), CAediting_1194166(40482732, -), CAediting_1194167(40482752, -), CAediting_1194168(40482992, -), CAediting_1194169(40483012, -), CAediting_1194170(40483022, -), CAediting_1194171(40483023, -), CAediting_1194172(40483042, -), CAediting_1194173(40483047, -), CAediting_1194174(40483048, -), CAediting_1194175(40483065, -), CAediting_1194176(40483070, -), CAediting_1194177(40483078, -), CAediting_1194178(40483082, -), CAediting_1194179(40483106, -), CAediting_1194180(40483146, -), CAediting_1194181(40483150, -), CAediting_1194182(40483175, -), CAediting_1194183(40483192, -), CAediting_1194184(40483199, -), CAediting_1194185(40483249, -), CAediting_1194186(40483302, -), CAediting_1194187(40483306, -), CAediting_1194188(40483307, -), CAediting_1194189(40483312, -), CAediting_1194190(40483321, -), CAediting_1194191(40483325, -), CAediting_1194192(40483331, -), CAediting_1194193(40483348, -), CAediting_1194194(40483354, -), CAediting_1194195(40483370, -), CAediting_1194196(40483397, -), CAediting_1194197(40483419, -), CAediting_1194198(40483424, -), CAediting_1194199(40483438, -), CAediting_1194200(40483447, -), CAediting_1194201(40483473, -), CAediting_1194202(40483474, -), CAediting_1194203(40483477, -), CAediting_1194204(40483482, -), CAediting_1194205(40483490, -), CAediting_1194206(40483492, -), CAediting_1194207(40483496, -), CAediting_1194208(40489582, -), CAediting_1194209(40489700, -), CAediting_1194210(40492398, -), CAediting_1194211(40492407, -), CAediting_1194212(40492426, -), CAediting_1194213(40492436, -), CAediting_1194214(40492437, -), CAediting_1194215(40492441, -), CAediting_1194216(40492466, -), CAediting_1194217(40492471, -), CAediting_1194218(40492474, -), CAediting_1194219(40492475, -), CAediting_1194220(40492490, -), CAediting_1194221(40492500, -), CAediting_1194222(40492506, -), CAediting_1194223(40492512, -), CAediting_1194224(40492521, -), CAediting_1194225(40492532, -), CAediting_1194226(40492550, -), CAediting_1194227(40492562, -), CAediting_1194228(40492571, -), CAediting_1194229(40492713, -), CAediting_1194230(40492727, -), CAediting_1194231(40492738, -), CAediting_1194232(40492780, -), CAediting_1194233(40492792, -), CAediting_1194234(40492793, -), CAediting_1194235(40492865, -), CAediting_1194236(40492879, -), CAediting_1194237(40492882, -), CAediting_1194238(40492888, -), CAediting_1194239(40492925, -), CAediting_1194240(40492952, -), CAediting_1194241(40493045, -), CAediting_1194242(40493058, -), CAediting_1194243(40493072, -), CAediting_1194244(40493080, -), CAediting_1194245(40493081, -), CAediting_1194246(40493085, -), CAediting_1194247(40493115, -), CAediting_1194248(40493129, -), CAediting_1194249(40494487, -), CAediting_1194250(40494588, -), CAediting_1194251(40494646, -), CAediting_1194252(40494691, -), CAediting_1194253(40497347, -), CAediting_1194254(40497359, -), CAediting_1194255(40497360, -), CAediting_1194256(40497369, -), CAediting_1194257(40497386, -), CAediting_1194258(40497399, -), CAediting_1194259(40497412, -), CAediting_1194260(40497415, -), CAediting_1194261(40497421, -), CAediting_1194262(40497441, -), CAediting_1194263(40497485, -), CAediting_1194264(40497517, -), CAediting_1194265(40497520, -), CAediting_1194266(40497540, -), CAediting_1194267(40497541, -), CAediting_1194268(40497570, -), CAediting_1194269(40497597, -), CAediting_1194270(40497623, -), CAediting_1194271(40498592, -), CAediting_1194272(40498625, -), CAediting_1194273(40498663, -), CAediting_1194274(40498673, -), CAediting_1194275(40498679, -), CAediting_1194276(40498686, -), CAediting_1194277(40498696, -), CAediting_1194278(40498703, -), CAediting_1194279(40498711, -), CAediting_1194280(40498748, -), CAediting_1194281(40498749, -), CAediting_1194282(40498767, -), CAediting_1194283(40498768, -), CAediting_1194284(40498776, -), CAediting_1194285(40498781, -), CAediting_1194286(40498813, -), CAediting_1194287(40498821, -), CAediting_1194288(40498822, -), CAediting_1194289(40498828, -), CAediting_1194290(40498830, -), CAediting_1194291(40498844, -), CAediting_1194292(40498850, -), CAediting_1194293(40501202, -), CAediting_1194294(40501203, -), CAediting_1194295(40501212, -), CAediting_1194296(40501217, -), CAediting_1194297(40501230, -), CAediting_1194298(40501244, -), CAediting_1194299(40501255, -), CAediting_1194300(40501267, -), CAediting_1194301(40501281, -), CAediting_1194302(40501284, -), CAediting_1194303(40501325, -), CAediting_1194304(40501334, -), CAediting_1194305(40501335, -), CAediting_1194306(40501339, -), CAediting_1194307(40501347, -), CAediting_1194308(40501364, -), CAediting_1194309(40501365, -), CAediting_1194310(40501421, -), CAediting_1194311(40501426, -),

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RNA editing positional annotations for TNS4 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1194104	chr17_40476599_-	ncRNA_exonic
CAediting_1194105	chr17_40476608_-	ncRNA_exonic
CAediting_1194106	chr17_40476620_-	ncRNA_exonic
CAediting_1194107	chr17_40476621_-	ncRNA_exonic
CAediting_1194108	chr17_40476644_-	ncRNA_exonic
CAediting_1194109	chr17_40476673_-	ncRNA_exonic
CAediting_1194110	chr17_40476682_-	ncRNA_exonic
CAediting_1194111	chr17_40476693_-	ncRNA_exonic
CAediting_1194112	chr17_40476697_-	ncRNA_exonic
CAediting_1194113	chr17_40476699_-	ncRNA_exonic
CAediting_1194114	chr17_40476702_-	ncRNA_exonic
CAediting_1194115	chr17_40476708_-	ncRNA_exonic
CAediting_1194116	chr17_40476716_-	ncRNA_exonic
CAediting_1194117	chr17_40476720_-	ncRNA_exonic
CAediting_1194118	chr17_40476735_-	ncRNA_exonic
CAediting_1194119	chr17_40476741_-	ncRNA_exonic
CAediting_1194120	chr17_40476751_-	ncRNA_exonic
CAediting_1194121	chr17_40476754_-	ncRNA_exonic
CAediting_1194122	chr17_40476755_-	ncRNA_exonic
CAediting_1194123	chr17_40476763_-	ncRNA_exonic
CAediting_1194124	chr17_40476776_-	ncRNA_exonic
CAediting_1194125	chr17_40476777_-	ncRNA_exonic
CAediting_1194126	chr17_40476780_-	ncRNA_exonic
CAediting_1194127	chr17_40476781_-	ncRNA_exonic
CAediting_1194128	chr17_40476794_-	ncRNA_exonic
CAediting_1194129	chr17_40476800_-	ncRNA_exonic
CAediting_1194130	chr17_40476801_-	ncRNA_exonic
CAediting_1194131	chr17_40476806_-	ncRNA_exonic
CAediting_1194132	chr17_40476812_-	ncRNA_exonic
CAediting_1194133	chr17_40476837_-	ncRNA_exonic
CAediting_1194134	chr17_40476841_-	ncRNA_exonic
CAediting_1194135	chr17_40476847_-	ncRNA_exonic
CAediting_1194136	chr17_40476859_-	ncRNA_exonic
CAediting_1194137	chr17_40476870_-	ncRNA_exonic
CAediting_1194138	chr17_40476876_-	ncRNA_exonic
CAediting_1194139	chr17_40479244_-	ncRNA_intronic
CAediting_1194140	chr17_40479259_-	ncRNA_intronic
CAediting_1194141	chr17_40479285_-	ncRNA_intronic
CAediting_1194142	chr17_40479292_-	ncRNA_intronic
CAediting_1194143	chr17_40481352_-	intronic
CAediting_1194144	chr17_40481462_-	intronic
CAediting_1194145	chr17_40481467_-	intronic
CAediting_1194146	chr17_40481476_-	intronic
CAediting_1194147	chr17_40481489_-	intronic
CAediting_1194148	chr17_40481502_-	intronic
CAediting_1194149	chr17_40481503_-	intronic
CAediting_1194150	chr17_40482487_-	intronic
CAediting_1194151	chr17_40482499_-	intronic
CAediting_1194152	chr17_40482514_-	intronic
CAediting_1194153	chr17_40482522_-	intronic
CAediting_1194154	chr17_40482526_-	intronic
CAediting_1194155	chr17_40482552_-	intronic
CAediting_1194156	chr17_40482561_-	intronic
CAediting_1194157	chr17_40482564_-	intronic
CAediting_1194158	chr17_40482576_-	intronic
CAediting_1194159	chr17_40482581_-	intronic
CAediting_1194160	chr17_40482650_-	intronic
CAediting_1194161	chr17_40482656_-	intronic
CAediting_1194162	chr17_40482666_-	intronic
CAediting_1194163	chr17_40482692_-	intronic
CAediting_1194164	chr17_40482695_-	intronic
CAediting_1194165	chr17_40482702_-	intronic
CAediting_1194166	chr17_40482732_-	intronic
CAediting_1194167	chr17_40482752_-	intronic
CAediting_1194168	chr17_40482992_-	intronic
CAediting_1194169	chr17_40483012_-	intronic
CAediting_1194170	chr17_40483022_-	intronic
CAediting_1194171	chr17_40483023_-	intronic
CAediting_1194172	chr17_40483042_-	intronic
CAediting_1194173	chr17_40483047_-	intronic
CAediting_1194174	chr17_40483048_-	intronic
CAediting_1194175	chr17_40483065_-	intronic
CAediting_1194176	chr17_40483070_-	intronic
CAediting_1194177	chr17_40483078_-	intronic
CAediting_1194178	chr17_40483082_-	intronic
CAediting_1194179	chr17_40483106_-	intronic
CAediting_1194180	chr17_40483146_-	intronic
CAediting_1194181	chr17_40483150_-	intronic
CAediting_1194182	chr17_40483175_-	intronic
CAediting_1194183	chr17_40483192_-	intronic
CAediting_1194184	chr17_40483199_-	intronic
CAediting_1194185	chr17_40483249_-	intronic
CAediting_1194186	chr17_40483302_-	intronic
CAediting_1194187	chr17_40483306_-	intronic
CAediting_1194188	chr17_40483307_-	intronic
CAediting_1194189	chr17_40483312_-	intronic
CAediting_1194190	chr17_40483321_-	intronic
CAediting_1194191	chr17_40483325_-	intronic
CAediting_1194192	chr17_40483331_-	intronic
CAediting_1194193	chr17_40483348_-	intronic
CAediting_1194194	chr17_40483354_-	intronic
CAediting_1194195	chr17_40483370_-	intronic
CAediting_1194196	chr17_40483397_-	intronic
CAediting_1194197	chr17_40483419_-	intronic
CAediting_1194198	chr17_40483424_-	intronic
CAediting_1194199	chr17_40483438_-	intronic
CAediting_1194200	chr17_40483447_-	intronic
CAediting_1194201	chr17_40483473_-	intronic
CAediting_1194202	chr17_40483474_-	intronic
CAediting_1194203	chr17_40483477_-	intronic
CAediting_1194204	chr17_40483482_-	intronic
CAediting_1194205	chr17_40483490_-	intronic
CAediting_1194206	chr17_40483492_-	intronic
CAediting_1194207	chr17_40483496_-	intronic
CAediting_1194208	chr17_40489582_-	intronic
CAediting_1194209	chr17_40489700_-	intronic
CAediting_1194210	chr17_40492398_-	intronic
CAediting_1194211	chr17_40492407_-	intronic
CAediting_1194212	chr17_40492426_-	intronic
CAediting_1194213	chr17_40492436_-	intronic
CAediting_1194214	chr17_40492437_-	intronic
CAediting_1194215	chr17_40492441_-	intronic
CAediting_1194216	chr17_40492466_-	intronic
CAediting_1194217	chr17_40492471_-	intronic
CAediting_1194218	chr17_40492474_-	intronic
CAediting_1194219	chr17_40492475_-	intronic
CAediting_1194220	chr17_40492490_-	intronic
CAediting_1194221	chr17_40492500_-	intronic
CAediting_1194222	chr17_40492506_-	intronic
CAediting_1194223	chr17_40492512_-	intronic
CAediting_1194224	chr17_40492521_-	intronic
CAediting_1194225	chr17_40492532_-	intronic
CAediting_1194226	chr17_40492550_-	intronic
CAediting_1194227	chr17_40492562_-	intronic
CAediting_1194228	chr17_40492571_-	intronic
CAediting_1194229	chr17_40492713_-	intronic
CAediting_1194230	chr17_40492727_-	intronic
CAediting_1194231	chr17_40492738_-	intronic
CAediting_1194232	chr17_40492780_-	intronic
CAediting_1194233	chr17_40492792_-	intronic
CAediting_1194234	chr17_40492793_-	intronic
CAediting_1194235	chr17_40492865_-	intronic
CAediting_1194236	chr17_40492879_-	intronic
CAediting_1194237	chr17_40492882_-	intronic
CAediting_1194238	chr17_40492888_-	intronic
CAediting_1194239	chr17_40492925_-	intronic
CAediting_1194240	chr17_40492952_-	intronic
CAediting_1194241	chr17_40493045_-	intronic
CAediting_1194242	chr17_40493058_-	intronic
CAediting_1194243	chr17_40493072_-	intronic
CAediting_1194244	chr17_40493080_-	intronic
CAediting_1194245	chr17_40493081_-	intronic
CAediting_1194246	chr17_40493085_-	intronic
CAediting_1194247	chr17_40493115_-	intronic
CAediting_1194248	chr17_40493129_-	intronic
CAediting_1194249	chr17_40494487_-	intronic
CAediting_1194250	chr17_40494588_-	intronic
CAediting_1194251	chr17_40494646_-	intronic
CAediting_1194252	chr17_40494691_-	intronic
CAediting_1194253	chr17_40497347_-	intronic
CAediting_1194254	chr17_40497359_-	intronic
CAediting_1194255	chr17_40497360_-	intronic
CAediting_1194256	chr17_40497369_-	intronic
CAediting_1194257	chr17_40497386_-	intronic
CAediting_1194258	chr17_40497399_-	intronic
CAediting_1194259	chr17_40497412_-	intronic
CAediting_1194260	chr17_40497415_-	intronic
CAediting_1194261	chr17_40497421_-	intronic
CAediting_1194262	chr17_40497441_-	intronic
CAediting_1194263	chr17_40497485_-	intronic
CAediting_1194264	chr17_40497517_-	intronic
CAediting_1194265	chr17_40497520_-	intronic
CAediting_1194266	chr17_40497540_-	intronic
CAediting_1194267	chr17_40497541_-	intronic
CAediting_1194268	chr17_40497570_-	intronic
CAediting_1194269	chr17_40497597_-	intronic
CAediting_1194270	chr17_40497623_-	intronic
CAediting_1194271	chr17_40498592_-	intronic
CAediting_1194272	chr17_40498625_-	intronic
CAediting_1194273	chr17_40498663_-	intronic
CAediting_1194274	chr17_40498673_-	intronic
CAediting_1194275	chr17_40498679_-	intronic
CAediting_1194276	chr17_40498686_-	intronic
CAediting_1194277	chr17_40498696_-	intronic
CAediting_1194278	chr17_40498703_-	intronic
CAediting_1194279	chr17_40498711_-	intronic
CAediting_1194280	chr17_40498748_-	intronic
CAediting_1194281	chr17_40498749_-	intronic
CAediting_1194282	chr17_40498767_-	intronic
CAediting_1194283	chr17_40498768_-	intronic
CAediting_1194284	chr17_40498776_-	intronic
CAediting_1194285	chr17_40498781_-	intronic
CAediting_1194286	chr17_40498813_-	intronic
CAediting_1194287	chr17_40498821_-	intronic
CAediting_1194288	chr17_40498822_-	intronic
CAediting_1194289	chr17_40498828_-	intronic
CAediting_1194290	chr17_40498830_-	intronic
CAediting_1194291	chr17_40498844_-	intronic
CAediting_1194292	chr17_40498850_-	intronic
CAediting_1194293	chr17_40501202_-	intronic
CAediting_1194294	chr17_40501203_-	intronic
CAediting_1194295	chr17_40501212_-	intronic
CAediting_1194296	chr17_40501217_-	intronic
CAediting_1194297	chr17_40501230_-	intronic
CAediting_1194298	chr17_40501244_-	intronic
CAediting_1194299	chr17_40501255_-	intronic
CAediting_1194300	chr17_40501267_-	intronic
CAediting_1194301	chr17_40501281_-	intronic
CAediting_1194302	chr17_40501284_-	intronic
CAediting_1194303	chr17_40501325_-	intronic
CAediting_1194304	chr17_40501334_-	intronic
CAediting_1194305	chr17_40501335_-	intronic
CAediting_1194306	chr17_40501339_-	intronic
CAediting_1194307	chr17_40501347_-	intronic
CAediting_1194308	chr17_40501364_-	intronic
CAediting_1194309	chr17_40501365_-	intronic
CAediting_1194310	chr17_40501421_-	intronic
CAediting_1194311	chr17_40501426_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1194104	chr17_40476599_-	SINE	Alu	AluSx
CAediting_1194105	chr17_40476608_-	SINE	Alu	AluSx
CAediting_1194106	chr17_40476620_-	SINE	Alu	AluSx
CAediting_1194107	chr17_40476621_-	SINE	Alu	AluSx
CAediting_1194108	chr17_40476644_-	SINE	Alu	AluSx
CAediting_1194109	chr17_40476673_-	SINE	Alu	AluSx
CAediting_1194110	chr17_40476682_-	SINE	Alu	AluSx
CAediting_1194111	chr17_40476693_-	SINE	Alu	AluSx
CAediting_1194112	chr17_40476697_-	SINE	Alu	AluSx
CAediting_1194113	chr17_40476699_-	SINE	Alu	AluSx
CAediting_1194114	chr17_40476702_-	SINE	Alu	AluSx
CAediting_1194115	chr17_40476708_-	SINE	Alu	AluSx
CAediting_1194116	chr17_40476716_-	SINE	Alu	AluSx
CAediting_1194117	chr17_40476720_-	SINE	Alu	AluSx
CAediting_1194118	chr17_40476735_-	SINE	Alu	AluSx
CAediting_1194119	chr17_40476741_-	SINE	Alu	AluSx
CAediting_1194120	chr17_40476751_-	SINE	Alu	AluSx
CAediting_1194121	chr17_40476754_-	SINE	Alu	AluSx
CAediting_1194122	chr17_40476755_-	SINE	Alu	AluSx
CAediting_1194123	chr17_40476763_-	SINE	Alu	AluSx
CAediting_1194124	chr17_40476776_-	SINE	Alu	AluSx
CAediting_1194125	chr17_40476777_-	SINE	Alu	AluSx
CAediting_1194126	chr17_40476780_-	SINE	Alu	AluSx
CAediting_1194127	chr17_40476781_-	SINE	Alu	AluSx
CAediting_1194128	chr17_40476794_-	SINE	Alu	AluSx
CAediting_1194129	chr17_40476800_-	SINE	Alu	AluSx
CAediting_1194130	chr17_40476801_-	SINE	Alu	AluSx
CAediting_1194131	chr17_40476806_-	SINE	Alu	AluSx
CAediting_1194132	chr17_40476812_-	SINE	Alu	AluSx
CAediting_1194133	chr17_40476837_-	SINE	Alu	AluSx
CAediting_1194134	chr17_40476841_-	SINE	Alu	AluSx
CAediting_1194135	chr17_40476847_-	SINE	Alu	AluSx
CAediting_1194136	chr17_40476859_-	SINE	Alu	AluSx
CAediting_1194137	chr17_40476870_-	SINE	Alu	AluSx
CAediting_1194138	chr17_40476876_-	SINE	Alu	AluSx
CAediting_1194139	chr17_40479244_-	SINE	Alu	AluSx
CAediting_1194140	chr17_40479259_-	SINE	Alu	AluSx
CAediting_1194141	chr17_40479285_-	SINE	Alu	AluSx
CAediting_1194142	chr17_40479292_-	SINE	Alu	AluSx
CAediting_1194143	chr17_40481352_-	SINE	Alu	AluSx1
CAediting_1194144	chr17_40481462_-	SINE	Alu	AluSx1
CAediting_1194145	chr17_40481467_-	SINE	Alu	AluSx1
CAediting_1194146	chr17_40481476_-	SINE	Alu	AluSx1
CAediting_1194147	chr17_40481489_-	SINE	Alu	AluSx1
CAediting_1194148	chr17_40481502_-	SINE	Alu	AluSx1
CAediting_1194149	chr17_40481503_-	SINE	Alu	AluSx1
CAediting_1194150	chr17_40482487_-	SINE	Alu	AluSz
CAediting_1194151	chr17_40482499_-	SINE	Alu	AluSz
CAediting_1194152	chr17_40482514_-	SINE	Alu	AluSz
CAediting_1194153	chr17_40482522_-	SINE	Alu	AluSz
CAediting_1194154	chr17_40482526_-	SINE	Alu	AluSz
CAediting_1194155	chr17_40482552_-	SINE	Alu	AluSz
CAediting_1194156	chr17_40482561_-	SINE	Alu	AluSz
CAediting_1194157	chr17_40482564_-	SINE	Alu	AluSz
CAediting_1194158	chr17_40482576_-	SINE	Alu	AluSz
CAediting_1194159	chr17_40482581_-	SINE	Alu	AluSz
CAediting_1194160	chr17_40482650_-	SINE	Alu	AluSz
CAediting_1194161	chr17_40482656_-	SINE	Alu	AluSz
CAediting_1194162	chr17_40482666_-	SINE	Alu	AluSz
CAediting_1194163	chr17_40482692_-	SINE	Alu	AluSz
CAediting_1194164	chr17_40482695_-	SINE	Alu	AluSz
CAediting_1194165	chr17_40482702_-	SINE	Alu	AluSz
CAediting_1194166	chr17_40482732_-	SINE	Alu	AluSz
CAediting_1194167	chr17_40482752_-	SINE	Alu	AluSz
CAediting_1194168	chr17_40482992_-	SINE	Alu	AluJb
CAediting_1194169	chr17_40483012_-	SINE	Alu	AluJb
CAediting_1194170	chr17_40483022_-	SINE	Alu	AluJb
CAediting_1194171	chr17_40483023_-	SINE	Alu	AluJb
CAediting_1194172	chr17_40483042_-	SINE	Alu	AluJb
CAediting_1194173	chr17_40483047_-	SINE	Alu	AluJb
CAediting_1194174	chr17_40483048_-	SINE	Alu	AluJb
CAediting_1194175	chr17_40483065_-	SINE	Alu	AluJb
CAediting_1194176	chr17_40483070_-	SINE	Alu	AluJb
CAediting_1194177	chr17_40483078_-	SINE	Alu	AluJb
CAediting_1194178	chr17_40483082_-	SINE	Alu	AluJb
CAediting_1194179	chr17_40483106_-	SINE	Alu	AluJb
CAediting_1194180	chr17_40483146_-	SINE	Alu	AluJb
CAediting_1194181	chr17_40483150_-	SINE	Alu	AluJb
CAediting_1194182	chr17_40483175_-	SINE	Alu	AluJb
CAediting_1194183	chr17_40483192_-	SINE	Alu	AluJb
CAediting_1194184	chr17_40483199_-	SINE	Alu	AluJb
CAediting_1194185	chr17_40483249_-	SINE	Alu	AluJb
CAediting_1194186	chr17_40483302_-	SINE	Alu	AluJb
CAediting_1194187	chr17_40483306_-	SINE	Alu	AluJb
CAediting_1194188	chr17_40483307_-	SINE	Alu	AluJb
CAediting_1194189	chr17_40483312_-	SINE	Alu	AluJb
CAediting_1194190	chr17_40483321_-	SINE	Alu	AluJb
CAediting_1194191	chr17_40483325_-	SINE	Alu	AluJb
CAediting_1194192	chr17_40483331_-	SINE	Alu	AluJb
CAediting_1194193	chr17_40483348_-	SINE	Alu	AluJb
CAediting_1194194	chr17_40483354_-	SINE	Alu	AluJb
CAediting_1194195	chr17_40483370_-	SINE	Alu	AluJb
CAediting_1194196	chr17_40483397_-	SINE	Alu	AluJb
CAediting_1194197	chr17_40483419_-	SINE	Alu	AluJb
CAediting_1194198	chr17_40483424_-	SINE	Alu	AluJb
CAediting_1194199	chr17_40483438_-	SINE	Alu	AluJb
CAediting_1194200	chr17_40483447_-	SINE	Alu	AluJb
CAediting_1194201	chr17_40483473_-	SINE	Alu	AluJb
CAediting_1194202	chr17_40483474_-	SINE	Alu	AluJb
CAediting_1194203	chr17_40483477_-	SINE	Alu	AluJb
CAediting_1194204	chr17_40483482_-	SINE	Alu	AluJb
CAediting_1194205	chr17_40483490_-	SINE	Alu	AluJb
CAediting_1194206	chr17_40483492_-	SINE	Alu	AluJb
CAediting_1194207	chr17_40483496_-	SINE	Alu	AluJb
CAediting_1194208	chr17_40489582_-	SINE	Alu	AluSq2
CAediting_1194209	chr17_40489700_-	SINE	Alu	AluSq2
CAediting_1194210	chr17_40492398_-	SINE	Alu	AluSx3
CAediting_1194211	chr17_40492407_-	SINE	Alu	AluSx3
CAediting_1194212	chr17_40492426_-	SINE	Alu	AluSx3
CAediting_1194213	chr17_40492436_-	SINE	Alu	AluSx3
CAediting_1194214	chr17_40492437_-	SINE	Alu	AluSx3
CAediting_1194215	chr17_40492441_-	SINE	Alu	AluSx3
CAediting_1194216	chr17_40492466_-	SINE	Alu	AluSx3
CAediting_1194217	chr17_40492471_-	SINE	Alu	AluSx3
CAediting_1194218	chr17_40492474_-	SINE	Alu	AluSx3
CAediting_1194219	chr17_40492475_-	SINE	Alu	AluSx3
CAediting_1194220	chr17_40492490_-	SINE	Alu	AluSx3
CAediting_1194221	chr17_40492500_-	SINE	Alu	AluSx3
CAediting_1194222	chr17_40492506_-	SINE	Alu	AluSx3
CAediting_1194223	chr17_40492512_-	SINE	Alu	AluSx3
CAediting_1194224	chr17_40492521_-	SINE	Alu	AluSx3
CAediting_1194225	chr17_40492532_-	SINE	Alu	AluSx3
CAediting_1194226	chr17_40492550_-	SINE	Alu	AluSx3
CAediting_1194227	chr17_40492562_-	SINE	Alu	AluSx3
CAediting_1194228	chr17_40492571_-	SINE	Alu	AluSx3
CAediting_1194229	chr17_40492713_-	SINE	Alu	AluJr
CAediting_1194230	chr17_40492727_-	SINE	Alu	AluJr
CAediting_1194231	chr17_40492738_-	SINE	Alu	AluJr
CAediting_1194232	chr17_40492780_-	SINE	Alu	AluSx1
CAediting_1194233	chr17_40492792_-	SINE	Alu	AluSx1
CAediting_1194234	chr17_40492793_-	SINE	Alu	AluSx1
CAediting_1194235	chr17_40492865_-	SINE	Alu	AluSx1
CAediting_1194236	chr17_40492879_-	SINE	Alu	AluSx1
CAediting_1194237	chr17_40492882_-	SINE	Alu	AluSx1
CAediting_1194238	chr17_40492888_-	SINE	Alu	AluSx1
CAediting_1194239	chr17_40492925_-	SINE	Alu	AluSx1
CAediting_1194240	chr17_40492952_-	SINE	Alu	AluSx1
CAediting_1194241	chr17_40493045_-	SINE	Alu	AluJr
CAediting_1194242	chr17_40493058_-	SINE	Alu	AluJr
CAediting_1194243	chr17_40493072_-	SINE	Alu	AluJr
CAediting_1194244	chr17_40493080_-	SINE	Alu	AluJr
CAediting_1194245	chr17_40493081_-	SINE	Alu	AluJr
CAediting_1194246	chr17_40493085_-	SINE	Alu	AluJr
CAediting_1194247	chr17_40493115_-	SINE	Alu	AluJr
CAediting_1194248	chr17_40493129_-	SINE	Alu	AluJr
CAediting_1194249	chr17_40494487_-	SINE	Alu	AluSx1
CAediting_1194250	chr17_40494588_-	SINE	Alu	AluSx1
CAediting_1194251	chr17_40494646_-	SINE	Alu	AluSx1
CAediting_1194252	chr17_40494691_-	SINE	Alu	AluSx1
CAediting_1194253	chr17_40497347_-	SINE	Alu	AluSz
CAediting_1194254	chr17_40497359_-	SINE	Alu	AluSz
CAediting_1194255	chr17_40497360_-	SINE	Alu	AluSz
CAediting_1194256	chr17_40497369_-	SINE	Alu	AluSz
CAediting_1194257	chr17_40497386_-	SINE	Alu	AluSz
CAediting_1194258	chr17_40497399_-	SINE	Alu	AluSz
CAediting_1194259	chr17_40497412_-	SINE	Alu	AluSz
CAediting_1194260	chr17_40497415_-	SINE	Alu	AluSz
CAediting_1194261	chr17_40497421_-	SINE	Alu	AluSz
CAediting_1194262	chr17_40497441_-	SINE	Alu	AluSz
CAediting_1194263	chr17_40497485_-	SINE	Alu	AluSz
CAediting_1194264	chr17_40497517_-	SINE	Alu	AluSz
CAediting_1194265	chr17_40497520_-	SINE	Alu	AluSz
CAediting_1194266	chr17_40497540_-	SINE	Alu	AluSz
CAediting_1194267	chr17_40497541_-	SINE	Alu	AluSz
CAediting_1194268	chr17_40497570_-	SINE	Alu	AluSz
CAediting_1194269	chr17_40497597_-	SINE	Alu	AluSz
CAediting_1194270	chr17_40497623_-	SINE	Alu	AluSz
CAediting_1194271	chr17_40498592_-	SINE	Alu	AluJb
CAediting_1194272	chr17_40498625_-	SINE	Alu	AluJb
CAediting_1194273	chr17_40498663_-	SINE	Alu	AluJb
CAediting_1194274	chr17_40498673_-	SINE	Alu	AluJb
CAediting_1194275	chr17_40498679_-	SINE	Alu	AluJb
CAediting_1194276	chr17_40498686_-	SINE	Alu	AluJb
CAediting_1194277	chr17_40498696_-	SINE	Alu	AluJb
CAediting_1194278	chr17_40498703_-	SINE	Alu	AluJb
CAediting_1194279	chr17_40498711_-	SINE	Alu	AluJb
CAediting_1194280	chr17_40498748_-	SINE	Alu	AluJb
CAediting_1194281	chr17_40498749_-	SINE	Alu	AluJb
CAediting_1194282	chr17_40498767_-	SINE	Alu	AluJb
CAediting_1194283	chr17_40498768_-	SINE	Alu	AluJb
CAediting_1194284	chr17_40498776_-	SINE	Alu	AluJb
CAediting_1194285	chr17_40498781_-	SINE	Alu	AluJb
CAediting_1194286	chr17_40498813_-	SINE	Alu	AluJb
CAediting_1194287	chr17_40498821_-	SINE	Alu	AluJb
CAediting_1194288	chr17_40498822_-	SINE	Alu	AluJb
CAediting_1194289	chr17_40498828_-	SINE	Alu	AluJb
CAediting_1194290	chr17_40498830_-	SINE	Alu	AluJb
CAediting_1194291	chr17_40498844_-	SINE	Alu	AluJb
CAediting_1194292	chr17_40498850_-	SINE	MIR	MIR
CAediting_1194293	chr17_40501202_-	SINE	Alu	AluSx1
CAediting_1194294	chr17_40501203_-	SINE	Alu	AluSx1
CAediting_1194295	chr17_40501212_-	SINE	Alu	AluSx1
CAediting_1194296	chr17_40501217_-	SINE	Alu	AluSx1
CAediting_1194297	chr17_40501230_-	SINE	Alu	AluSx1
CAediting_1194298	chr17_40501244_-	SINE	Alu	AluSx1
CAediting_1194299	chr17_40501255_-	SINE	Alu	AluSx1
CAediting_1194300	chr17_40501267_-	SINE	Alu	AluSx1
CAediting_1194301	chr17_40501281_-	SINE	Alu	AluSx1
CAediting_1194302	chr17_40501284_-	SINE	Alu	AluSx1
CAediting_1194303	chr17_40501325_-	SINE	Alu	AluSx1
CAediting_1194304	chr17_40501334_-	SINE	Alu	AluSx1
CAediting_1194305	chr17_40501335_-	SINE	Alu	AluSx1
CAediting_1194306	chr17_40501339_-	SINE	Alu	AluSx1
CAediting_1194307	chr17_40501347_-	SINE	Alu	AluSx1
CAediting_1194308	chr17_40501364_-	SINE	Alu	AluSx1
CAediting_1194309	chr17_40501365_-	SINE	Alu	AluSx1
CAediting_1194310	chr17_40501421_-	SINE	Alu	AluSx1
CAediting_1194311	chr17_40501426_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for TNS4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1194105	chr17_40476608_-	40476602:40476624	3SS	0+4i	CCAAAGTGCTGGGATTACAGGCG	-1.62	CCAAAGTGCTGGGATTGCAGGCG	-0.61
IR	CAediting_1194106	chr17_40476620_-	40476602:40476624	3SS	0+16i	CCAAAGTGCTGGGATTACAGGCG	-1.62	CCAAGGTGCTGGGATTACAGGCG	-1.12
IR	CAediting_1194107	chr17_40476621_-	40476602:40476624	3SS	0+17i	CCAAAGTGCTGGGATTACAGGCG	-1.62	CCAGAGTGCTGGGATTACAGGCG	-2.23
IR	CAediting_1194118	chr17_40476735_-	40476731:40476739	5SS	0+2i	AGGCATGTG	-24.57	AGGCGTGTG	-24.03

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000131746.11.TNS4.

Correlation between RNA A-to-I editing and PSI for ENSG00000131746.11.TNS4.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TNS4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

STAD.CAediting_1194131.ENSG00000131746.TNS4.png
Soverview

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Protein coding region RNA A-to-I editings for TNS4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TNS4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000131746.11	ENST00000582747	hsa-miR-605-3p	40478146	40478153	8mer-1a	40478146	40478167	155	-14.6
CAediting_748296	chr10_51299626_+	ENSG00000131746.11	ENST00000582747	hsa-miR-605-3p	40478011	40478018	8mer-1a	40478011	40478033	146	-16.19
CAediting_688080	chr9_63819626_+	ENSG00000131746.11	ENST00000582747	hsa-miR-4477b	40477967	40477973	7mer-m8	40477966	40477991	161	-20.72
CAediting_396018	chr5_1062918_-	ENSG00000131746.11	ENST00000582747	hsa-miR-4635	40477966	40477972	7mer-m8	40477965	40477985	166	-22.63

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000131746.11	ENST00000582747	hsa-miR-4512	40478194	40478200	7mer-m8	40478193	40478216	145	-22.84

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TNS4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TNS4

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for TNS4

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_1194279	chr17_40498711_-	0.0328618112376521	0.302306577742448

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Relation with survival for TNS4

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
ESCA	CAediting_1194222	chr17_40492506_-	0.00109754521762806	0.00854378	144.998
ESCA	CAediting_1194289	chr17_40498828_-	0.000906854889352937	0.00899045	1279.77

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RelatedDrugs for TNS4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TNS4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene