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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: NFATC2IP (CAeditome ID:84901)

Gene summary for NFATC2IP

check button Gene summary
Gene informationGene symbol

NFATC2IP

Gene ID

84901

Gene namenuclear factor of activated T cells 2 interacting protein
SynonymsESC2|NIP45|RAD60
Cytomap

16p11.2

Type of geneprotein-coding
DescriptionNFATC2-interacting protein45 kDa NF-AT-interacting protein45 kDa NFAT-interacting proteinnuclear factor of activated T-cells, cytoplasmic 2-interacting proteinnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protei
Modification date20210518
UniProtAcc

Q8NCF5

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for NFATC2IP

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000176953.9
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1107740(28952842, +), CAediting_1107741(28952843, +), CAediting_1107742(28952847, +), CAediting_1107743(28952860, +), CAediting_1107744(28953100, +), CAediting_1107745(28953106, +), CAediting_1107746(28953138, +), CAediting_1107747(28953144, +), CAediting_1107748(28953155, +), CAediting_1107749(28953168, +), CAediting_1107750(28953175, +), CAediting_1107751(28953192, +), CAediting_1107752(28953204, +), CAediting_1107753(28953207, +), CAediting_1107754(28953214, +), CAediting_1107755(28953216, +), CAediting_1107756(28953247, +), CAediting_1107757(28953282, +), CAediting_1107758(28953334, +), CAediting_1107759(28953335, +), CAediting_1107760(28953644, +), CAediting_1107761(28953645, +), CAediting_1107762(28953653, +), CAediting_1107763(28953662, +), CAediting_1107764(28953663, +), CAediting_1107765(28953671, +), CAediting_1107766(28953687, +), CAediting_1107767(28953708, +), CAediting_1107768(28953717, +), CAediting_1107769(28953719, +), CAediting_1107770(28953722, +), CAediting_1107771(28953731, +), CAediting_1107772(28953732, +), CAediting_1107773(28953734, +), CAediting_1107774(28953737, +), CAediting_1107775(28953740, +), CAediting_1107776(28953753, +), CAediting_1107777(28953758, +), CAediting_1107778(28953759, +), CAediting_1107779(28953760, +), CAediting_1107780(28953761, +), CAediting_1107781(28953763, +), CAediting_1107782(28953764, +), CAediting_1107783(28953765, +), CAediting_1107784(28953766, +), CAediting_1107785(28953767, +), CAediting_1107786(28953771, +), CAediting_1107787(28953772, +), CAediting_1107788(28953797, +), CAediting_1107789(28953803, +), CAediting_1107790(28953807, +), CAediting_1107791(28953811, +), CAediting_1107792(28953814, +), CAediting_1107793(28953830, +), CAediting_1107794(28953831, +), CAediting_1107795(28953833, +), CAediting_1107796(28953838, +), CAediting_1107797(28953846, +), CAediting_1107798(28953847, +), CAediting_1107799(28953859, +), CAediting_1107800(28953867, +), CAediting_1107801(28953873, +), CAediting_1107802(28953905, +), CAediting_1107803(28954996, +), CAediting_1107804(28955005, +), CAediting_1107805(28955006, +), CAediting_1107806(28955010, +), CAediting_1107807(28955016, +), CAediting_1107808(28955027, +), CAediting_1107809(28955047, +), CAediting_1107810(28955055, +), CAediting_1107811(28955074, +), CAediting_1107812(28955079, +), CAediting_1107813(28955090, +), CAediting_1107814(28955096, +), CAediting_1107815(28955098, +), CAediting_1107816(28955103, +), CAediting_1107817(28955104, +), CAediting_1107818(28955105, +), CAediting_1107819(28955114, +), CAediting_1107820(28955122, +), CAediting_1107821(28955126, +), CAediting_1107822(28955128, +), CAediting_1107823(28955139, +), CAediting_1107824(28955143, +), CAediting_1107825(28955146, +), CAediting_1107826(28955154, +), CAediting_1107827(28955164, +), CAediting_1107828(28955176, +), CAediting_1107829(28955178, +), CAediting_1107830(28955212, +), CAediting_1107831(28955281, +), CAediting_1107832(28955282, +), CAediting_1107833(28955299, +), CAediting_1107834(28955303, +), CAediting_1107835(28955306, +), CAediting_1107836(28955321, +), CAediting_1107837(28955322, +), CAediting_1107838(28955338, +), CAediting_1107839(28955357, +), CAediting_1107840(28955367, +), CAediting_1107841(28955375, +), CAediting_1107842(28955589, +), CAediting_1107843(28955602, +), CAediting_1107844(28955608, +), CAediting_1107845(28955616, +), CAediting_1107846(28955618, +), CAediting_1107847(28955622, +), CAediting_1107848(28955630, +), CAediting_1107849(28955635, +), CAediting_1107850(28955642, +), CAediting_1107851(28955663, +), CAediting_1107852(28955666, +), CAediting_1107853(28955668, +), CAediting_1107854(28955678, +), CAediting_1107855(28955684, +), CAediting_1107856(28955685, +), CAediting_1107857(28955686, +), CAediting_1107858(28955698, +), CAediting_1107859(28955699, +), CAediting_1107860(28955703, +), CAediting_1107861(28955716, +), CAediting_1107862(28955725, +), CAediting_1107863(28955728, +), CAediting_1107864(28955735, +), CAediting_1107865(28955738, +), CAediting_1107866(28955772, +), CAediting_1107867(28955775, +), CAediting_1107868(28955778, +), CAediting_1107869(28955789, +), CAediting_1107870(28955798, +), CAediting_1107871(28955828, +), CAediting_1107872(28955841, +), CAediting_1107873(28955849, +), CAediting_1107874(28955850, +), CAediting_1107875(28955851, +), CAediting_1107876(28955863, +), CAediting_1107877(28956628, +), CAediting_1107878(28956641, +), CAediting_1107879(28956653, +), CAediting_1107880(28956680, +), CAediting_1107881(28956681, +),

Top

RNA editing positional annotations for NFATC2IP using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1107740chr16_28952842_+ncRNA_intronic
CAediting_1107741chr16_28952843_+ncRNA_intronic
CAediting_1107742chr16_28952847_+ncRNA_intronic
CAediting_1107743chr16_28952860_+ncRNA_intronic
CAediting_1107744chr16_28953100_+ncRNA_intronic
CAediting_1107745chr16_28953106_+ncRNA_intronic
CAediting_1107746chr16_28953138_+ncRNA_intronic
CAediting_1107747chr16_28953144_+ncRNA_intronic
CAediting_1107748chr16_28953155_+ncRNA_intronic
CAediting_1107749chr16_28953168_+ncRNA_intronic
CAediting_1107750chr16_28953175_+ncRNA_intronic
CAediting_1107751chr16_28953192_+ncRNA_intronic
CAediting_1107752chr16_28953204_+ncRNA_intronic
CAediting_1107753chr16_28953207_+ncRNA_intronic
CAediting_1107754chr16_28953214_+ncRNA_intronic
CAediting_1107755chr16_28953216_+ncRNA_intronic
CAediting_1107756chr16_28953247_+ncRNA_intronic
CAediting_1107757chr16_28953282_+ncRNA_intronic
CAediting_1107758chr16_28953334_+ncRNA_intronic
CAediting_1107759chr16_28953335_+ncRNA_intronic
CAediting_1107760chr16_28953644_+ncRNA_intronic
CAediting_1107761chr16_28953645_+ncRNA_intronic
CAediting_1107762chr16_28953653_+ncRNA_intronic
CAediting_1107763chr16_28953662_+ncRNA_intronic
CAediting_1107764chr16_28953663_+ncRNA_intronic
CAediting_1107765chr16_28953671_+ncRNA_intronic
CAediting_1107766chr16_28953687_+ncRNA_intronic
CAediting_1107767chr16_28953708_+ncRNA_intronic
CAediting_1107768chr16_28953717_+ncRNA_intronic
CAediting_1107769chr16_28953719_+ncRNA_intronic
CAediting_1107770chr16_28953722_+ncRNA_intronic
CAediting_1107771chr16_28953731_+ncRNA_intronic
CAediting_1107772chr16_28953732_+ncRNA_intronic
CAediting_1107773chr16_28953734_+ncRNA_intronic
CAediting_1107774chr16_28953737_+ncRNA_intronic
CAediting_1107775chr16_28953740_+ncRNA_intronic
CAediting_1107776chr16_28953753_+ncRNA_intronic
CAediting_1107777chr16_28953758_+ncRNA_intronic
CAediting_1107778chr16_28953759_+ncRNA_intronic
CAediting_1107779chr16_28953760_+ncRNA_intronic
CAediting_1107780chr16_28953761_+ncRNA_intronic
CAediting_1107781chr16_28953763_+ncRNA_intronic
CAediting_1107782chr16_28953764_+ncRNA_intronic
CAediting_1107783chr16_28953765_+ncRNA_intronic
CAediting_1107784chr16_28953766_+ncRNA_intronic
CAediting_1107785chr16_28953767_+ncRNA_intronic
CAediting_1107786chr16_28953771_+ncRNA_intronic
CAediting_1107787chr16_28953772_+ncRNA_intronic
CAediting_1107788chr16_28953797_+ncRNA_intronic
CAediting_1107789chr16_28953803_+ncRNA_intronic
CAediting_1107790chr16_28953807_+ncRNA_intronic
CAediting_1107791chr16_28953811_+ncRNA_intronic
CAediting_1107792chr16_28953814_+ncRNA_intronic
CAediting_1107793chr16_28953830_+ncRNA_intronic
CAediting_1107794chr16_28953831_+ncRNA_intronic
CAediting_1107795chr16_28953833_+ncRNA_intronic
CAediting_1107796chr16_28953838_+ncRNA_intronic
CAediting_1107797chr16_28953846_+ncRNA_intronic
CAediting_1107798chr16_28953847_+ncRNA_intronic
CAediting_1107799chr16_28953859_+ncRNA_intronic
CAediting_1107800chr16_28953867_+ncRNA_intronic
CAediting_1107801chr16_28953873_+ncRNA_intronic
CAediting_1107802chr16_28953905_+ncRNA_intronic
CAediting_1107803chr16_28954996_+ncRNA_intronic
CAediting_1107804chr16_28955005_+ncRNA_intronic
CAediting_1107805chr16_28955006_+ncRNA_intronic
CAediting_1107806chr16_28955010_+ncRNA_intronic
CAediting_1107807chr16_28955016_+ncRNA_intronic
CAediting_1107808chr16_28955027_+ncRNA_intronic
CAediting_1107809chr16_28955047_+ncRNA_intronic
CAediting_1107810chr16_28955055_+ncRNA_intronic
CAediting_1107811chr16_28955074_+ncRNA_intronic
CAediting_1107812chr16_28955079_+ncRNA_intronic
CAediting_1107813chr16_28955090_+ncRNA_intronic
CAediting_1107814chr16_28955096_+ncRNA_intronic
CAediting_1107815chr16_28955098_+ncRNA_intronic
CAediting_1107816chr16_28955103_+ncRNA_intronic
CAediting_1107817chr16_28955104_+ncRNA_intronic
CAediting_1107818chr16_28955105_+ncRNA_intronic
CAediting_1107819chr16_28955114_+ncRNA_intronic
CAediting_1107820chr16_28955122_+ncRNA_intronic
CAediting_1107821chr16_28955126_+ncRNA_intronic
CAediting_1107822chr16_28955128_+ncRNA_intronic
CAediting_1107823chr16_28955139_+ncRNA_intronic
CAediting_1107824chr16_28955143_+ncRNA_intronic
CAediting_1107825chr16_28955146_+ncRNA_intronic
CAediting_1107826chr16_28955154_+ncRNA_intronic
CAediting_1107827chr16_28955164_+ncRNA_intronic
CAediting_1107828chr16_28955176_+ncRNA_intronic
CAediting_1107829chr16_28955178_+ncRNA_intronic
CAediting_1107830chr16_28955212_+ncRNA_intronic
CAediting_1107831chr16_28955281_+ncRNA_intronic
CAediting_1107832chr16_28955282_+ncRNA_intronic
CAediting_1107833chr16_28955299_+ncRNA_intronic
CAediting_1107834chr16_28955303_+ncRNA_intronic
CAediting_1107835chr16_28955306_+ncRNA_intronic
CAediting_1107836chr16_28955321_+ncRNA_intronic
CAediting_1107837chr16_28955322_+ncRNA_intronic
CAediting_1107838chr16_28955338_+ncRNA_intronic
CAediting_1107839chr16_28955357_+ncRNA_intronic
CAediting_1107840chr16_28955367_+ncRNA_intronic
CAediting_1107841chr16_28955375_+ncRNA_intronic
CAediting_1107842chr16_28955589_+ncRNA_intronic
CAediting_1107843chr16_28955602_+ncRNA_intronic
CAediting_1107844chr16_28955608_+ncRNA_intronic
CAediting_1107845chr16_28955616_+ncRNA_intronic
CAediting_1107846chr16_28955618_+ncRNA_intronic
CAediting_1107847chr16_28955622_+ncRNA_intronic
CAediting_1107848chr16_28955630_+ncRNA_intronic
CAediting_1107849chr16_28955635_+ncRNA_intronic
CAediting_1107850chr16_28955642_+ncRNA_intronic
CAediting_1107851chr16_28955663_+ncRNA_intronic
CAediting_1107852chr16_28955666_+ncRNA_intronic
CAediting_1107853chr16_28955668_+ncRNA_intronic
CAediting_1107854chr16_28955678_+ncRNA_intronic
CAediting_1107855chr16_28955684_+ncRNA_intronic
CAediting_1107856chr16_28955685_+ncRNA_intronic
CAediting_1107857chr16_28955686_+ncRNA_intronic
CAediting_1107858chr16_28955698_+ncRNA_intronic
CAediting_1107859chr16_28955699_+ncRNA_intronic
CAediting_1107860chr16_28955703_+ncRNA_intronic
CAediting_1107861chr16_28955716_+ncRNA_intronic
CAediting_1107862chr16_28955725_+ncRNA_intronic
CAediting_1107863chr16_28955728_+ncRNA_intronic
CAediting_1107864chr16_28955735_+ncRNA_intronic
CAediting_1107865chr16_28955738_+ncRNA_intronic
CAediting_1107866chr16_28955772_+ncRNA_intronic
CAediting_1107867chr16_28955775_+ncRNA_intronic
CAediting_1107868chr16_28955778_+ncRNA_intronic
CAediting_1107869chr16_28955789_+ncRNA_intronic
CAediting_1107870chr16_28955798_+ncRNA_intronic
CAediting_1107871chr16_28955828_+ncRNA_intronic
CAediting_1107872chr16_28955841_+ncRNA_intronic
CAediting_1107873chr16_28955849_+ncRNA_intronic
CAediting_1107874chr16_28955850_+ncRNA_intronic
CAediting_1107875chr16_28955851_+ncRNA_intronic
CAediting_1107876chr16_28955863_+ncRNA_intronic
CAediting_1107877chr16_28956628_+ncRNA_exonic
CAediting_1107878chr16_28956641_+ncRNA_exonic
CAediting_1107879chr16_28956653_+ncRNA_exonic
CAediting_1107880chr16_28956680_+ncRNA_exonic
CAediting_1107881chr16_28956681_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1107740chr16_28952842_+SINEAluAluSq2
CAediting_1107741chr16_28952843_+SINEAluAluSq2
CAediting_1107742chr16_28952847_+SINEAluAluSq2
CAediting_1107743chr16_28952860_+SINEAluAluSq2
CAediting_1107744chr16_28953100_+SINEAluAluSx1
CAediting_1107745chr16_28953106_+SINEAluAluSx1
CAediting_1107746chr16_28953138_+SINEAluAluSx1
CAediting_1107747chr16_28953144_+SINEAluAluSx1
CAediting_1107748chr16_28953155_+SINEAluAluSx1
CAediting_1107749chr16_28953168_+SINEAluAluSx1
CAediting_1107750chr16_28953175_+SINEAluAluSx1
CAediting_1107751chr16_28953192_+SINEAluAluSx1
CAediting_1107752chr16_28953204_+SINEAluAluSx1
CAediting_1107753chr16_28953207_+SINEAluAluSx1
CAediting_1107754chr16_28953214_+SINEAluAluSx1
CAediting_1107755chr16_28953216_+SINEAluAluSx1
CAediting_1107756chr16_28953247_+SINEAluAluSx1
CAediting_1107757chr16_28953282_+SINEAluAluSx1
CAediting_1107758chr16_28953334_+SINEAluAluSx1
CAediting_1107759chr16_28953335_+SINEAluAluSx1
CAediting_1107760chr16_28953644_+SINEAluAluJb
CAediting_1107761chr16_28953645_+SINEAluAluJb
CAediting_1107762chr16_28953653_+SINEAluAluJb
CAediting_1107763chr16_28953662_+SINEAluAluJb
CAediting_1107764chr16_28953663_+SINEAluAluJb
CAediting_1107765chr16_28953671_+SINEAluAluJb
CAediting_1107766chr16_28953687_+SINEAluAluJb
CAediting_1107767chr16_28953708_+SINEAluAluJb
CAediting_1107768chr16_28953717_+SINEAluAluJb
CAediting_1107769chr16_28953719_+SINEAluAluJb
CAediting_1107770chr16_28953722_+SINEAluAluJb
CAediting_1107771chr16_28953731_+SINEAluAluJb
CAediting_1107772chr16_28953732_+SINEAluAluJb
CAediting_1107773chr16_28953734_+SINEAluAluJb
CAediting_1107774chr16_28953737_+SINEAluAluJb
CAediting_1107775chr16_28953740_+SINEAluAluJb
CAediting_1107776chr16_28953753_+SINEAluAluJb
CAediting_1107777chr16_28953758_+SINEAluAluJb
CAediting_1107778chr16_28953759_+SINEAluAluJb
CAediting_1107779chr16_28953760_+SINEAluAluJb
CAediting_1107780chr16_28953761_+SINEAluAluJb
CAediting_1107781chr16_28953763_+SINEAluAluJb
CAediting_1107782chr16_28953764_+SINEAluAluJb
CAediting_1107783chr16_28953765_+SINEAluAluJb
CAediting_1107784chr16_28953766_+SINEAluAluJb
CAediting_1107785chr16_28953767_+SINEAluAluJb
CAediting_1107786chr16_28953771_+SINEAluAluJb
CAediting_1107787chr16_28953772_+SINEAluAluJb
CAediting_1107788chr16_28953797_+SINEAluAluJb
CAediting_1107789chr16_28953803_+SINEAluAluJb
CAediting_1107790chr16_28953807_+SINEAluAluJb
CAediting_1107791chr16_28953811_+SINEAluAluJb
CAediting_1107792chr16_28953814_+SINEAluAluJb
CAediting_1107793chr16_28953830_+SINEAluAluJb
CAediting_1107794chr16_28953831_+SINEAluAluJb
CAediting_1107795chr16_28953833_+SINEAluAluJb
CAediting_1107796chr16_28953838_+SINEAluAluJb
CAediting_1107797chr16_28953846_+SINEAluAluJb
CAediting_1107798chr16_28953847_+SINEAluAluJb
CAediting_1107799chr16_28953859_+SINEAluAluJb
CAediting_1107800chr16_28953867_+SINEAluAluJb
CAediting_1107801chr16_28953873_+SINEAluAluJb
CAediting_1107802chr16_28953905_+SINEAluAluJb
CAediting_1107803chr16_28954996_+SINEAluAluJr
CAediting_1107804chr16_28955005_+SINEAluAluJr
CAediting_1107805chr16_28955006_+SINEAluAluJr
CAediting_1107806chr16_28955010_+SINEAluAluJr
CAediting_1107807chr16_28955016_+SINEAluAluJr
CAediting_1107808chr16_28955027_+SINEAluAluJr
CAediting_1107809chr16_28955047_+SINEAluAluJr
CAediting_1107810chr16_28955055_+SINEAluAluJr
CAediting_1107811chr16_28955074_+SINEAluAluJr
CAediting_1107812chr16_28955079_+SINEAluAluJr
CAediting_1107813chr16_28955090_+SINEAluAluJr
CAediting_1107814chr16_28955096_+SINEAluAluJr
CAediting_1107815chr16_28955098_+SINEAluAluJr
CAediting_1107816chr16_28955103_+SINEAluAluJr
CAediting_1107817chr16_28955104_+SINEAluAluJr
CAediting_1107818chr16_28955105_+SINEAluAluJr
CAediting_1107819chr16_28955114_+SINEAluAluJr
CAediting_1107820chr16_28955122_+SINEAluAluJr
CAediting_1107821chr16_28955126_+SINEAluAluJr
CAediting_1107822chr16_28955128_+SINEAluAluJr
CAediting_1107823chr16_28955139_+SINEAluAluJr
CAediting_1107824chr16_28955143_+SINEAluAluJr
CAediting_1107825chr16_28955146_+SINEAluAluJr
CAediting_1107826chr16_28955154_+SINEAluAluJr
CAediting_1107827chr16_28955164_+SINEAluAluJr
CAediting_1107828chr16_28955176_+SINEAluAluJr
CAediting_1107829chr16_28955178_+SINEAluAluJr
CAediting_1107830chr16_28955212_+SINEAluAluJr
CAediting_1107833chr16_28955299_+SINEAluAluJb
CAediting_1107834chr16_28955303_+SINEAluAluJb
CAediting_1107835chr16_28955306_+SINEAluAluJb
CAediting_1107836chr16_28955321_+SINEAluAluJb
CAediting_1107837chr16_28955322_+SINEAluAluJb
CAediting_1107838chr16_28955338_+SINEAluAluJb
CAediting_1107839chr16_28955357_+SINEAluAluJb
CAediting_1107840chr16_28955367_+SINEAluAluJb
CAediting_1107841chr16_28955375_+SINEAluAluJb
CAediting_1107842chr16_28955589_+SINEAluAluJo
CAediting_1107843chr16_28955602_+SINEAluAluJo
CAediting_1107844chr16_28955608_+SINEAluAluJo
CAediting_1107845chr16_28955616_+SINEAluAluJo
CAediting_1107846chr16_28955618_+SINEAluAluJo
CAediting_1107847chr16_28955622_+SINEAluAluJo
CAediting_1107848chr16_28955630_+SINEAluAluJo
CAediting_1107849chr16_28955635_+SINEAluAluJo
CAediting_1107850chr16_28955642_+SINEAluAluJo
CAediting_1107851chr16_28955663_+SINEAluAluJo
CAediting_1107852chr16_28955666_+SINEAluAluJo
CAediting_1107853chr16_28955668_+SINEAluAluJo
CAediting_1107854chr16_28955678_+SINEAluAluJo
CAediting_1107855chr16_28955684_+SINEAluAluJo
CAediting_1107856chr16_28955685_+SINEAluAluJo
CAediting_1107857chr16_28955686_+SINEAluAluJo
CAediting_1107858chr16_28955698_+SINEAluAluJo
CAediting_1107859chr16_28955699_+SINEAluAluJo
CAediting_1107860chr16_28955703_+SINEAluAluJo
CAediting_1107861chr16_28955716_+SINEAluAluJo
CAediting_1107862chr16_28955725_+SINEAluAluJo
CAediting_1107863chr16_28955728_+SINEAluAluJo
CAediting_1107864chr16_28955735_+SINEAluAluJo
CAediting_1107865chr16_28955738_+SINEAluAluJo
CAediting_1107866chr16_28955772_+SINEAluAluJo
CAediting_1107867chr16_28955775_+SINEAluAluJo
CAediting_1107868chr16_28955778_+SINEAluAluJo
CAediting_1107869chr16_28955789_+SINEAluAluJo
CAediting_1107870chr16_28955798_+SINEAluAluJo
CAediting_1107871chr16_28955828_+SINEAluAluJo
CAediting_1107872chr16_28955841_+SINEAluAluJo
CAediting_1107873chr16_28955849_+SINEAluAluJo
CAediting_1107874chr16_28955850_+SINEAluAluJo
CAediting_1107875chr16_28955851_+SINEAluAluJo
CAediting_1107876chr16_28955863_+SINEAluAluJo
CAediting_1107877chr16_28956628_+SINEAluFLAM_C
CAediting_1107878chr16_28956641_+SINEAluFLAM_C
CAediting_1107879chr16_28956653_+SINEAluFLAM_C
CAediting_1107880chr16_28956680_+SINEAluFLAM_C
CAediting_1107881chr16_28956681_+SINEAluFLAM_C

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RNA A-to-I editing events in the alternative splicing sites for NFATC2IP

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000176953.9.NFATC2IP.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000176953.9.NFATC2IP.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NFATC2IP

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
KIRC.CAediting_1107821.ENSG00000176953.NFATC2IP.png
Soverview
KIRC.CAediting_1107839.ENSG00000176953.NFATC2IP.png
Soverview
LUSC.CAediting_1107853.ENSG00000176953.NFATC2IP.png
Soverview
TGCT.CAediting_1107853.ENSG00000176953.NFATC2IP.png
Soverview

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Protein coding region RNA A-to-I editings for NFATC2IP

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for NFATC2IP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000176953.9ENST00000564978hsa-miR-200b-3p28965152289651598mer-1a2896513528965159153-17.79
CAediting_846604chr11_93733708_-ENSG00000176953.9ENST00000320805hsa-miR-1304-3p28966425289664328mer-1a2896640928966432147-21.25
CAediting_393chr1_1167164_+ENSG00000176953.9ENST00000320805hsa-miR-200b-3p28965152289651598mer-1a2896513528965159153-17.79
CAediting_1229413chr17_67471544_+ENSG00000176953.9ENST00000564978hsa-miR-548aa28965189289651957mer-m82896517228965196148-9.43
CAediting_573001chr7_92204086_-ENSG00000176953.9ENST00000564978hsa-miR-1285-5p28965489289654946mer2896547528965495142-27.4
CAediting_1229413chr17_67471544_+ENSG00000176953.9ENST00000320805hsa-miR-548aa28965189289651957mer-m82896517228965196148-9.43
CAediting_1229413chr17_67471544_+ENSG00000176953.9ENST00000320805hsa-miR-548aa28966485289664917mer-m82896646428966492142-15.52
CAediting_117844chr1_162342605_+ENSG00000176953.9ENST00000320805hsa-miR-556-3p28967078289670847mer-m82896706428967085155-13.84
CAediting_228905chr2_188297554_+ENSG00000176953.9ENST00000320805hsa-miR-561-3p28966748289667547mer-m82896673528966755148-16.74
CAediting_604450chr7_133034877_-ENSG00000176953.9ENST00000320805hsa-miR-365428966220289662267mer-m82896620928966227140-17.5
CAediting_573001chr7_92204086_-ENSG00000176953.9ENST00000320805hsa-miR-1285-5p28965489289654946mer2896547528965495142-27.4

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000176953.9ENST00000564978hsa-miR-200b-3p28964788289647947mer-m82896477428964795147-13.59
CAediting_1229413chr17_67471544_+ENSG00000176953.9ENST00000564978hsa-miR-548aa28964994289650007mer-m82896497128965001146-14.87
CAediting_1229414chr17_67471546_+ENSG00000176953.9ENST00000564978hsa-miR-548aa28964994289650007mer-m82896497128965001146-14.87
CAediting_1229415chr17_67471547_+ENSG00000176953.9ENST00000564978hsa-miR-548aa28964994289650007mer-m82896497128965001146-14.87
CAediting_442554chr5_154685830_+ENSG00000176953.9ENST00000320805hsa-miR-130328966881289668877mer-m82896686628966888155-14.71
CAediting_1160181chr17_7017644_-ENSG00000176953.9ENST00000320805hsa-miR-195-3p28966319289663257mer-m82896630428966326142-9.46
CAediting_393chr1_1167164_+ENSG00000176953.9ENST00000320805hsa-miR-200b-3p28964788289647947mer-m82896477428964795147-13.59
CAediting_1229413chr17_67471544_+ENSG00000176953.9ENST00000320805hsa-miR-548aa28964994289650007mer-m82896497128965001146-14.87
CAediting_1229414chr17_67471546_+ENSG00000176953.9ENST00000320805hsa-miR-548aa28964994289650007mer-m82896497128965001146-14.87
CAediting_1229415chr17_67471547_+ENSG00000176953.9ENST00000320805hsa-miR-548aa28964994289650007mer-m82896497128965001146-14.87
CAediting_980496chr14_31014685_-ENSG00000176953.9ENST00000320805hsa-miR-624-3p28966432289664387mer-m82896641728966439154-12.73
CAediting_1351755chr19_40282625_-ENSG00000176953.9ENST00000320805hsa-miR-64128964638289646447mer-m82896462228964645147-13.81
CAediting_1399425chr20_1392958_-ENSG00000176953.9ENST00000320805hsa-miR-6869-5p28965941289659477mer-m82896592628965948146-17

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NFATC2IP

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for NFATC2IP

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_1107806chr16_28955010_+0.04211179472252280.24190182843847....
LUADCAediting_1107806chr16_28955010_+0.002843266906038370.228210083751997....
ESCACAediting_1107817chr16_28955104_+..0.003747893171208980.300942295591771..
COADCAediting_1107821chr16_28955126_+0.04003904250135040.193484498438759....
LUSCCAediting_1107821chr16_28955126_+..0.01659276862281060.182457912829487..
STADCAediting_1107821chr16_28955126_+0.0001929541406132940.241390208564346....
BRCACAediting_1107824chr16_28955143_+0.004849380086914620.240214859768203....
CESCCAediting_1107824chr16_28955143_+0.02355772967122640.261283749720023....
LUADCAediting_1107824chr16_28955143_+0.01444766623087470.232658905486236....
LUSCCAediting_1107824chr16_28955143_+0.02006608887212930.220462616984682....
STADCAediting_1107824chr16_28955143_+0.0007591204381203340.220023498048935....
ESCACAediting_1107824chr16_28955143_+0.03960882418628940.1723053460644079.6023912344617e-050.320343281850499..
LUADCAediting_1107828chr16_28955176_+0.004704485237388490.369243467471161....
BRCACAediting_1107833chr16_28955299_+0.007095650783408870.344130682530579....
BLCACAediting_1107835chr16_28955306_+0.0146281214295950.205240990424484....
LGGCAediting_1107835chr16_28955306_+0.00641901810838570.270848135912971....
BRCACAediting_1107835chr16_28955306_+6.90253533910296e-130.307413217655726....
CESCCAediting_1107835chr16_28955306_+8.93858740570155e-050.287039502226947....
LUADCAediting_1107835chr16_28955306_+0.0001456037326802360.229146138711471....
COADCAediting_1107835chr16_28955306_+0.002718619623777420.244740772270697....
LUSCCAediting_1107835chr16_28955306_+1.9724277495077e-060.285272554337862....
PRADCAediting_1107835chr16_28955306_+0.002264662262488630.364193648765201....
HNSCCAediting_1107835chr16_28955306_+0.03204140110725660.228770769472872....
STADCAediting_1107835chr16_28955306_+6.691100794621e-050.271562608177303....
THCACAediting_1107835chr16_28955306_+0.02361442849622660.235855235880625....
KIRPCAediting_1107835chr16_28955306_+0.02454248338223380.225924631532711....
OVCAediting_1107835chr16_28955306_+0.007366844767175890.233133287806873....
TGCTCAediting_1107835chr16_28955306_+4.20267503445489e-070.511198449000531....
BLCACAediting_1107839chr16_28955357_+0.008182531034987940.222679275871006....
LGGCAediting_1107839chr16_28955357_+....0.01794755791622680.280197399250383
BRCACAediting_1107839chr16_28955357_+1.23277064173517e-070.24775909470299....
CESCCAediting_1107839chr16_28955357_+0.002236391373906990.23361733510252....
LUADCAediting_1107839chr16_28955357_+0.009380226283625540.168788496365722....
COADCAediting_1107839chr16_28955357_+0.03714967067115140.19050084630568....
LUSCCAediting_1107839chr16_28955357_+1.21791426211582e-070.339552580395135....
THCACAediting_1107839chr16_28955357_+0.01628226226874320.29042374075674....
KIRCCAediting_1107839chr16_28955357_+..0.01328123519840120.182749451899228..
LAMLCAediting_1107839chr16_28955357_+0.03897160620130060.172253670431923..0.02604710976655260.185463413825925
OVCAediting_1107839chr16_28955357_+0.01632848763645830.212755594850697....
PAADCAediting_1107839chr16_28955357_+0.02490377599129240.28471824196911....
SKCMCAediting_1107839chr16_28955357_+..0.01324960949474250.25466207994173..
TGCTCAediting_1107839chr16_28955357_+5.95267254481991e-070.527294736567391....
BLCACAediting_1107845chr16_28955616_+....0.0005129551867515210.349719871236939
ESCACAediting_1107845chr16_28955616_+..1.06063561998379e-050.388584479759897..
LUADCAediting_1107852chr16_28955666_+0.01157808663661290.321287429975114....
BRCACAediting_1107867chr16_28955775_+..0.006164997336882220.346892195611205..
BRCACAediting_1107870chr16_28955798_+0.006116062435207960.283798814100352....
BLCACAediting_1107875chr16_28955851_+0.00709570954689350.249795772406414....
BRCACAediting_1107875chr16_28955851_+5.27429172801553e-090.288053702940014....
CESCCAediting_1107875chr16_28955851_+0.0171465727506550.210378299015517....
LUADCAediting_1107875chr16_28955851_+0.03054584009744670.162644752275043....
TGCTCAediting_1107875chr16_28955851_+0.04544463684561020.255037608257825....
BLCACAediting_1107879chr16_28956653_+0.005848169131356870.277914508496348....
LGGCAediting_1107879chr16_28956653_+0.005146245337664020.276380845078382....
BRCACAediting_1107879chr16_28956653_+8.80776987750394e-180.35747528888048....
CESCCAediting_1107879chr16_28956653_+0.006345901774383530.246833545322168....
LUADCAediting_1107879chr16_28956653_+8.26943737487076e-070.322298876572974....
LUSCCAediting_1107879chr16_28956653_+0.0002657034870131120.22826633255589....
THCACAediting_1107879chr16_28956653_+0.02309204040819670.246261151350817....
KIRPCAediting_1107879chr16_28956653_+0.01483821172958740.269852358019569....
ESCACAediting_1107879chr16_28956653_+..0.0424026731852340.204413990618012..
SKCMCAediting_1107879chr16_28956653_+0.04708664758453690.209888589578063....

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Relation with cancer stages for NFATC2IP

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BLCApathologic_stageCAediting_1107835chr16_28955306_+0.01647958835756820.202390293292835
BRCApathologic_stageCAediting_1107852chr16_28955666_+0.01008671697309930.27293986847667
CESCclinical_stageCAediting_1107879chr16_28956653_+0.02906607115889-0.200161028519282
ESCAclinical_stageCAediting_1107791chr16_28953811_+0.016717556718333-0.47385508616974
ESCAclinical_stageCAediting_1107806chr16_28955010_+0.0212128843430291-0.372657942516975
ESCAclinical_stageCAediting_1107821chr16_28955126_+0.0105694305045863-0.365772833727577
ESCAclinical_stageCAediting_1107824chr16_28955143_+0.00629928311047819-0.401252692155249
ESCAclinical_stageCAediting_1107875chr16_28955851_+0.00941118666781943-0.466209778193843
ESCAclinical_stageCAediting_1107879chr16_28956653_+0.0171320589736426-0.431987402203117
ESCApathologic_stageCAediting_1107806chr16_28955010_+0.02962134828286080.20118882258062
ESCApathologic_stageCAediting_1107821chr16_28955126_+0.02677732016656370.199719955103134
ESCApathologic_stageCAediting_1107835chr16_28955306_+0.04708304658143240.176548351721994
ESCApathologic_stageCAediting_1107852chr16_28955666_+0.01930275714112230.296453372451004
ESCApathologic_stageCAediting_1107875chr16_28955851_+0.0446443027604845-0.204372633096628
KIRCpathologic_stageCAediting_1107806chr16_28955010_+0.004934328029113530.256101240695955
KIRCpathologic_stageCAediting_1107821chr16_28955126_+0.003841033191335640.282474030136819
KIRCpathologic_stageCAediting_1107835chr16_28955306_+0.0004002216472067520.242080330980361
KIRCpathologic_stageCAediting_1107855chr16_28955684_+0.000916715821605801-0.413795054984375
KIRCpathologic_stageCAediting_1107879chr16_28956653_+0.006465919742391940.185618583591547
KIRPclinical_stageCAediting_1107835chr16_28955306_+0.006758916695018580.348924693747126
KIRPclinical_stageCAediting_1107879chr16_28956653_+0.007124375036284820.372385785469387
KIRPpathologic_stageCAediting_1107835chr16_28955306_+0.01221788445042610.270703884498127
KIRPpathologic_stageCAediting_1107879chr16_28956653_+0.03799746206126730.248564724854494
LUSCpathologic_stageCAediting_1107821chr16_28955126_+0.002020246158677090.234506074565221
STADpathologic_stageCAediting_1107788chr16_28953797_+0.03817410312027180.257760610603555
STADpathologic_stageCAediting_1107852chr16_28955666_+0.00624749676709102-0.303263944316216
STADpathologic_stageCAediting_1107853chr16_28955668_+0.04774611559192840.13743820847683
TGCTpathologic_stageCAediting_1107839chr16_28955357_+0.0439047568384408-0.308827865579836
THCApathologic_stageCAediting_1107835chr16_28955306_+0.0352935442015214-0.220980287679841

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Relation with survival for NFATC2IP

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LUADCAediting_1107852chr16_28955666_+0.01648486868443650.0050889322926.4
SKCMCAediting_1107875chr16_28955851_+0.04179833599233320.02223510.00814023

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RelatedDrugs for NFATC2IP

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for NFATC2IP

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource