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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TMEM25 (CAeditome ID:84866)

Gene summary for TMEM25

check button Gene summary
Gene informationGene symbol

TMEM25

Gene ID

84866

Gene nametransmembrane protein 25
Synonyms-
Cytomap

11q23.3

Type of geneprotein-coding
Descriptiontransmembrane protein 250610039J01Rik
Modification date20210518
UniProtAcc

Q86YD3

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for TMEM25

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000149582.14
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_854830(118535921, +), CAediting_854831(118535933, +), CAediting_854832(118535942, +), CAediting_854833(118535971, +), CAediting_854834(118535973, +), CAediting_854835(118535978, +), CAediting_854836(118535979, +), CAediting_854837(118535995, +), CAediting_854838(118536007, +), CAediting_854839(118536050, +), CAediting_854840(118536052, +), CAediting_854841(118536058, +), CAediting_854842(118536061, +), CAediting_854843(118536075, +), CAediting_854844(118536112, +), CAediting_854845(118536113, +), CAediting_854846(118536125, +), CAediting_854847(118536138, +), CAediting_854848(118536139, +), CAediting_854849(118536140, +), CAediting_854850(118536152, +), CAediting_854851(118536170, +), CAediting_854852(118536258, +), CAediting_854853(118536320, +), CAediting_854854(118536335, +), CAediting_854855(118536427, +), CAediting_854856(118536445, +), CAediting_854857(118536453, +), CAediting_854858(118536454, +), CAediting_854859(118536455, +), CAediting_854860(118536467, +), CAediting_854861(118536473, +), CAediting_854862(118536911, +), CAediting_854863(118536914, +), CAediting_854864(118536925, +), CAediting_854865(118536938, +), CAediting_854866(118536939, +), CAediting_854867(118536944, +), CAediting_854868(118536962, +), CAediting_854869(118536974, +), CAediting_854870(118536975, +), CAediting_854871(118536979, +), CAediting_854872(118536987, +), CAediting_854873(118536992, +), CAediting_854874(118537004, +), CAediting_854875(118537011, +), CAediting_854876(118537036, +), CAediting_854877(118537056, +), CAediting_854878(118537077, +), CAediting_854879(118537085, +), CAediting_854880(118537086, +), CAediting_854881(118537094, +), CAediting_854882(118537126, +), CAediting_854883(118537131, +), CAediting_854884(118537133, +), CAediting_854885(118537142, +), CAediting_854886(118537155, +), CAediting_854887(118537165, +), CAediting_854888(118537179, +), CAediting_854889(118537187, +), CAediting_854890(118537194, +), CAediting_854891(118537207, +), CAediting_854892(118537226, +), CAediting_854893(118537230, +), CAediting_854894(118537266, +), CAediting_854895(118537269, +), CAediting_854896(118537282, +), CAediting_854897(118537286, +), CAediting_854898(118537291, +), CAediting_854899(118537293, +), CAediting_854900(118537306, +), CAediting_854901(118537328, +), CAediting_854902(118537329, +), CAediting_854903(118537357, +), CAediting_854904(118537359, +), CAediting_854905(118537361, +), CAediting_854906(118537363, +), CAediting_854907(118537371, +), CAediting_854908(118537789, +), CAediting_854909(118537795, +), CAediting_854910(118537796, +), CAediting_854911(118537804, +), CAediting_854912(118537841, +), CAediting_854913(118537849, +), CAediting_854914(118537887, +), CAediting_854915(118537890, +), CAediting_854916(118537891, +), CAediting_854917(118537892, +), CAediting_854918(118537893, +), CAediting_854919(118537895, +), CAediting_854920(118537898, +), CAediting_854921(118537899, +), CAediting_854922(118537900, +), CAediting_854923(118537904, +), CAediting_854924(118537930, +), CAediting_854925(118537936, +), CAediting_854926(118537940, +), CAediting_854927(118537958, +), CAediting_854928(118537966, +), CAediting_854929(118537971, +), CAediting_854930(118537983, +), CAediting_854931(118538000, +), CAediting_854932(118538002, +), CAediting_854933(118538005, +), CAediting_854934(118538010, +), CAediting_854935(118538195, +), CAediting_854936(118538197, +), CAediting_854937(118538241, +), CAediting_854938(118538265, +), CAediting_854939(118538275, +), CAediting_854940(118538289, +), CAediting_854941(118538334, +), CAediting_854942(118538343, +), CAediting_854943(118538359, +), CAediting_854944(118538366, +), CAediting_854945(118538371, +), CAediting_854946(118538391, +), CAediting_854947(118538414, +), CAediting_854948(118538427, +), CAediting_854949(118538428, +), CAediting_854950(118538429, +), CAediting_854951(118538441, +), CAediting_854952(118538615, +), CAediting_854953(118538631, +), CAediting_854954(118538637, +), CAediting_854955(118538709, +), CAediting_854956(118538714, +), CAediting_854957(118538717, +), CAediting_854958(118538782, +), CAediting_854959(118538844, +), CAediting_854960(118538896, +), CAediting_854961(118539232, +), CAediting_854962(118539268, +), CAediting_854963(118539294, +), CAediting_854964(118539365, +), CAediting_854965(118539377, +), CAediting_854966(118539428, +), CAediting_854967(118539440, +), CAediting_854968(118539446, +), CAediting_854969(118539486, +), CAediting_854970(118539743, +), CAediting_854971(118539747, +), CAediting_854972(118539749, +), CAediting_854973(118539757, +), CAediting_854974(118539759, +), CAediting_854975(118539765, +), CAediting_854976(118539766, +), CAediting_854977(118539768, +), CAediting_854978(118539796, +), CAediting_854979(118539814, +), CAediting_854980(118539861, +), CAediting_854981(118539865, +), CAediting_854982(118539870, +), CAediting_854983(118539874, +), CAediting_854984(118539933, +), CAediting_854985(118539942, +), CAediting_854986(118539949, +), CAediting_854987(118540129, +), CAediting_854988(118540131, +), CAediting_854989(118540184, +), CAediting_854990(118540190, +), CAediting_854991(118540214, +), CAediting_854992(118540239, +), CAediting_854993(118540249, +), CAediting_854994(118541341, +), CAediting_854995(118541776, +), CAediting_854996(118541821, +), CAediting_854997(118541894, +), CAediting_854998(118541923, +), CAediting_854999(118541976, +), CAediting_855000(118541977, +), CAediting_855001(118541978, +), CAediting_855002(118541990, +), CAediting_855003(118541991, +), CAediting_855004(118541994, +), CAediting_855005(118542043, +), CAediting_855006(118542511, +), CAediting_855007(118543123, +), CAediting_855008(118543907, +), CAediting_855009(118543924, +), CAediting_855010(118543946, +),

Top

RNA editing positional annotations for TMEM25 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_854830chr11_118535921_+intronic
CAediting_854831chr11_118535933_+intronic
CAediting_854832chr11_118535942_+intronic
CAediting_854833chr11_118535971_+intronic
CAediting_854834chr11_118535973_+intronic
CAediting_854835chr11_118535978_+intronic
CAediting_854836chr11_118535979_+intronic
CAediting_854837chr11_118535995_+intronic
CAediting_854838chr11_118536007_+intronic
CAediting_854839chr11_118536050_+intronic
CAediting_854840chr11_118536052_+intronic
CAediting_854841chr11_118536058_+intronic
CAediting_854842chr11_118536061_+intronic
CAediting_854843chr11_118536075_+intronic
CAediting_854844chr11_118536112_+intronic
CAediting_854845chr11_118536113_+intronic
CAediting_854846chr11_118536125_+intronic
CAediting_854847chr11_118536138_+intronic
CAediting_854848chr11_118536139_+intronic
CAediting_854849chr11_118536140_+intronic
CAediting_854850chr11_118536152_+intronic
CAediting_854851chr11_118536170_+intronic
CAediting_854852chr11_118536258_+intronic
CAediting_854853chr11_118536320_+intronic
CAediting_854854chr11_118536335_+intronic
CAediting_854855chr11_118536427_+intronic
CAediting_854856chr11_118536445_+intronic
CAediting_854857chr11_118536453_+intronic
CAediting_854858chr11_118536454_+intronic
CAediting_854859chr11_118536455_+intronic
CAediting_854860chr11_118536467_+intronic
CAediting_854861chr11_118536473_+intronic
CAediting_854862chr11_118536911_+intronic
CAediting_854863chr11_118536914_+intronic
CAediting_854864chr11_118536925_+intronic
CAediting_854865chr11_118536938_+intronic
CAediting_854866chr11_118536939_+intronic
CAediting_854867chr11_118536944_+intronic
CAediting_854868chr11_118536962_+intronic
CAediting_854869chr11_118536974_+intronic
CAediting_854870chr11_118536975_+intronic
CAediting_854871chr11_118536979_+intronic
CAediting_854872chr11_118536987_+intronic
CAediting_854873chr11_118536992_+intronic
CAediting_854874chr11_118537004_+intronic
CAediting_854875chr11_118537011_+intronic
CAediting_854876chr11_118537036_+intronic
CAediting_854877chr11_118537056_+intronic
CAediting_854878chr11_118537077_+intronic
CAediting_854879chr11_118537085_+intronic
CAediting_854880chr11_118537086_+intronic
CAediting_854881chr11_118537094_+intronic
CAediting_854882chr11_118537126_+intronic
CAediting_854883chr11_118537131_+intronic
CAediting_854884chr11_118537133_+intronic
CAediting_854885chr11_118537142_+intronic
CAediting_854886chr11_118537155_+intronic
CAediting_854887chr11_118537165_+intronic
CAediting_854888chr11_118537179_+intronic
CAediting_854889chr11_118537187_+intronic
CAediting_854890chr11_118537194_+intronic
CAediting_854891chr11_118537207_+intronic
CAediting_854892chr11_118537226_+intronic
CAediting_854893chr11_118537230_+intronic
CAediting_854894chr11_118537266_+intronic
CAediting_854895chr11_118537269_+intronic
CAediting_854896chr11_118537282_+intronic
CAediting_854897chr11_118537286_+intronic
CAediting_854898chr11_118537291_+intronic
CAediting_854899chr11_118537293_+intronic
CAediting_854900chr11_118537306_+intronic
CAediting_854901chr11_118537328_+intronic
CAediting_854902chr11_118537329_+intronic
CAediting_854903chr11_118537357_+intronic
CAediting_854904chr11_118537359_+intronic
CAediting_854905chr11_118537361_+intronic
CAediting_854906chr11_118537363_+intronic
CAediting_854907chr11_118537371_+intronic
CAediting_854908chr11_118537789_+intronic
CAediting_854909chr11_118537795_+intronic
CAediting_854910chr11_118537796_+intronic
CAediting_854911chr11_118537804_+intronic
CAediting_854912chr11_118537841_+intronic
CAediting_854913chr11_118537849_+intronic
CAediting_854914chr11_118537887_+intronic
CAediting_854915chr11_118537890_+intronic
CAediting_854916chr11_118537891_+intronic
CAediting_854917chr11_118537892_+intronic
CAediting_854918chr11_118537893_+intronic
CAediting_854919chr11_118537895_+intronic
CAediting_854920chr11_118537898_+intronic
CAediting_854921chr11_118537899_+intronic
CAediting_854922chr11_118537900_+intronic
CAediting_854923chr11_118537904_+intronic
CAediting_854924chr11_118537930_+intronic
CAediting_854925chr11_118537936_+intronic
CAediting_854926chr11_118537940_+intronic
CAediting_854927chr11_118537958_+intronic
CAediting_854928chr11_118537966_+intronic
CAediting_854929chr11_118537971_+intronic
CAediting_854930chr11_118537983_+intronic
CAediting_854931chr11_118538000_+intronic
CAediting_854932chr11_118538002_+intronic
CAediting_854933chr11_118538005_+intronic
CAediting_854934chr11_118538010_+intronic
CAediting_854935chr11_118538195_+intronic
CAediting_854936chr11_118538197_+intronic
CAediting_854937chr11_118538241_+intronic
CAediting_854938chr11_118538265_+intronic
CAediting_854939chr11_118538275_+intronic
CAediting_854940chr11_118538289_+intronic
CAediting_854941chr11_118538334_+intronic
CAediting_854942chr11_118538343_+intronic
CAediting_854943chr11_118538359_+intronic
CAediting_854944chr11_118538366_+intronic
CAediting_854945chr11_118538371_+intronic
CAediting_854946chr11_118538391_+intronic
CAediting_854947chr11_118538414_+intronic
CAediting_854948chr11_118538427_+intronic
CAediting_854949chr11_118538428_+intronic
CAediting_854950chr11_118538429_+intronic
CAediting_854951chr11_118538441_+intronic
CAediting_854952chr11_118538615_+intronic
CAediting_854953chr11_118538631_+intronic
CAediting_854954chr11_118538637_+intronic
CAediting_854955chr11_118538709_+intronic
CAediting_854956chr11_118538714_+intronic
CAediting_854957chr11_118538717_+intronic
CAediting_854958chr11_118538782_+intronic
CAediting_854959chr11_118538844_+intronic
CAediting_854960chr11_118538896_+intronic
CAediting_854961chr11_118539232_+intronic
CAediting_854962chr11_118539268_+intronic
CAediting_854963chr11_118539294_+intronic
CAediting_854964chr11_118539365_+intronic
CAediting_854965chr11_118539377_+intronic
CAediting_854966chr11_118539428_+intronic
CAediting_854967chr11_118539440_+intronic
CAediting_854968chr11_118539446_+intronic
CAediting_854969chr11_118539486_+intronic
CAediting_854970chr11_118539743_+intronic
CAediting_854971chr11_118539747_+intronic
CAediting_854972chr11_118539749_+intronic
CAediting_854973chr11_118539757_+intronic
CAediting_854974chr11_118539759_+intronic
CAediting_854975chr11_118539765_+intronic
CAediting_854976chr11_118539766_+intronic
CAediting_854977chr11_118539768_+intronic
CAediting_854978chr11_118539796_+intronic
CAediting_854979chr11_118539814_+intronic
CAediting_854980chr11_118539861_+intronic
CAediting_854981chr11_118539865_+intronic
CAediting_854982chr11_118539870_+intronic
CAediting_854983chr11_118539874_+intronic
CAediting_854984chr11_118539933_+intronic
CAediting_854985chr11_118539942_+intronic
CAediting_854986chr11_118539949_+intronic
CAediting_854987chr11_118540129_+intronic
CAediting_854988chr11_118540131_+intronic
CAediting_854989chr11_118540184_+intronic
CAediting_854990chr11_118540190_+intronic
CAediting_854991chr11_118540214_+intronic
CAediting_854992chr11_118540239_+intronic
CAediting_854993chr11_118540249_+intronic
CAediting_854994chr11_118541341_+intronic
CAediting_854995chr11_118541776_+intronic
CAediting_854996chr11_118541821_+intronic
CAediting_854997chr11_118541894_+intronic
CAediting_854998chr11_118541923_+intronic
CAediting_854999chr11_118541976_+intronic
CAediting_855000chr11_118541977_+intronic
CAediting_855001chr11_118541978_+intronic
CAediting_855002chr11_118541990_+intronic
CAediting_855003chr11_118541991_+intronic
CAediting_855004chr11_118541994_+intronic
CAediting_855005chr11_118542043_+intronic
CAediting_855006chr11_118542511_+intronic
CAediting_855007chr11_118543123_+intronic
CAediting_855008chr11_118543907_+intronic
CAediting_855009chr11_118543924_+intronic
CAediting_855010chr11_118543946_+intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_854830chr11_118535921_+SINEAluAluSx1
CAediting_854831chr11_118535933_+SINEAluAluSx1
CAediting_854832chr11_118535942_+SINEAluAluSx1
CAediting_854833chr11_118535971_+SINEAluAluSx1
CAediting_854834chr11_118535973_+SINEAluAluSx1
CAediting_854835chr11_118535978_+SINEAluAluSx1
CAediting_854836chr11_118535979_+SINEAluAluSx1
CAediting_854837chr11_118535995_+SINEAluAluSx1
CAediting_854838chr11_118536007_+SINEAluAluSx1
CAediting_854839chr11_118536050_+SINEAluAluSx1
CAediting_854840chr11_118536052_+SINEAluAluSx1
CAediting_854841chr11_118536058_+SINEAluAluSx1
CAediting_854842chr11_118536061_+SINEAluAluSx1
CAediting_854843chr11_118536075_+SINEAluAluSx1
CAediting_854844chr11_118536112_+SINEAluAluSx1
CAediting_854845chr11_118536113_+SINEAluAluSx1
CAediting_854846chr11_118536125_+SINEAluAluSx1
CAediting_854847chr11_118536138_+SINEAluAluSx1
CAediting_854848chr11_118536139_+SINEAluAluSx1
CAediting_854849chr11_118536140_+SINEAluAluSx1
CAediting_854850chr11_118536152_+SINEAluAluSx1
CAediting_854851chr11_118536170_+SINEAluAluSx1
CAediting_854852chr11_118536258_+SINEAluAluSp
CAediting_854853chr11_118536320_+SINEAluAluSp
CAediting_854854chr11_118536335_+SINEAluAluSp
CAediting_854855chr11_118536427_+SINEAluAluSp
CAediting_854856chr11_118536445_+SINEAluAluSp
CAediting_854857chr11_118536453_+SINEAluAluSp
CAediting_854858chr11_118536454_+SINEAluAluSp
CAediting_854859chr11_118536455_+SINEAluAluSp
CAediting_854860chr11_118536467_+SINEAluAluSp
CAediting_854861chr11_118536473_+SINEAluAluSp
CAediting_854862chr11_118536911_+SINEAluAluJo
CAediting_854863chr11_118536914_+SINEAluAluJo
CAediting_854864chr11_118536925_+SINEAluAluJo
CAediting_854865chr11_118536938_+SINEAluAluJo
CAediting_854866chr11_118536939_+SINEAluAluJo
CAediting_854867chr11_118536944_+SINEAluAluJo
CAediting_854868chr11_118536962_+SINEAluAluJo
CAediting_854869chr11_118536974_+SINEAluAluJo
CAediting_854870chr11_118536975_+SINEAluAluJo
CAediting_854871chr11_118536979_+SINEAluAluJo
CAediting_854872chr11_118536987_+SINEAluAluJo
CAediting_854873chr11_118536992_+SINEAluAluJo
CAediting_854874chr11_118537004_+SINEAluAluJo
CAediting_854875chr11_118537011_+SINEAluAluJo
CAediting_854876chr11_118537036_+SINEAluAluJo
CAediting_854877chr11_118537056_+SINEAluAluJo
CAediting_854878chr11_118537077_+SINEAluAluSx
CAediting_854879chr11_118537085_+SINEAluAluSx
CAediting_854880chr11_118537086_+SINEAluAluSx
CAediting_854881chr11_118537094_+SINEAluAluSx
CAediting_854882chr11_118537126_+SINEAluAluSx
CAediting_854883chr11_118537131_+SINEAluAluSx
CAediting_854884chr11_118537133_+SINEAluAluSx
CAediting_854885chr11_118537142_+SINEAluAluSx
CAediting_854886chr11_118537155_+SINEAluAluSx
CAediting_854887chr11_118537165_+SINEAluAluSx
CAediting_854888chr11_118537179_+SINEAluAluSx
CAediting_854889chr11_118537187_+SINEAluAluSx
CAediting_854890chr11_118537194_+SINEAluAluSx
CAediting_854891chr11_118537207_+SINEAluAluSx
CAediting_854892chr11_118537226_+SINEAluAluSx
CAediting_854893chr11_118537230_+SINEAluAluSx
CAediting_854894chr11_118537266_+SINEAluAluSx
CAediting_854895chr11_118537269_+SINEAluAluSx
CAediting_854896chr11_118537282_+SINEAluAluSx
CAediting_854897chr11_118537286_+SINEAluAluSx
CAediting_854898chr11_118537291_+SINEAluAluSx
CAediting_854899chr11_118537293_+SINEAluAluSx
CAediting_854900chr11_118537306_+SINEAluAluSx
CAediting_854901chr11_118537328_+SINEAluAluSx
CAediting_854902chr11_118537329_+SINEAluAluSx
CAediting_854903chr11_118537357_+SINEAluAluJo
CAediting_854904chr11_118537359_+SINEAluAluJo
CAediting_854905chr11_118537361_+SINEAluAluJo
CAediting_854906chr11_118537363_+SINEAluAluJo
CAediting_854907chr11_118537371_+SINEAluAluJo
CAediting_854908chr11_118537789_+SINEAluAluJb
CAediting_854909chr11_118537795_+SINEAluAluJb
CAediting_854910chr11_118537796_+SINEAluAluJb
CAediting_854911chr11_118537804_+SINEAluAluJb
CAediting_854912chr11_118537841_+SINEAluAluJb
CAediting_854913chr11_118537849_+SINEAluAluJb
CAediting_854914chr11_118537887_+SINEAluAluJb
CAediting_854915chr11_118537890_+SINEAluAluJb
CAediting_854916chr11_118537891_+SINEAluAluJb
CAediting_854917chr11_118537892_+SINEAluAluJb
CAediting_854918chr11_118537893_+SINEAluAluJb
CAediting_854919chr11_118537895_+SINEAluAluJb
CAediting_854920chr11_118537898_+SINEAluAluJb
CAediting_854921chr11_118537899_+SINEAluAluJb
CAediting_854922chr11_118537900_+SINEAluAluJb
CAediting_854923chr11_118537904_+SINEAluAluJb
CAediting_854924chr11_118537930_+SINEAluAluJb
CAediting_854925chr11_118537936_+SINEAluAluJb
CAediting_854926chr11_118537940_+SINEAluAluJb
CAediting_854927chr11_118537958_+SINEAluAluJb
CAediting_854928chr11_118537966_+SINEAluAluJb
CAediting_854929chr11_118537971_+SINEAluAluJb
CAediting_854930chr11_118537983_+SINEAluAluJb
CAediting_854931chr11_118538000_+SINEAluAluJb
CAediting_854932chr11_118538002_+SINEAluAluJb
CAediting_854933chr11_118538005_+SINEAluAluJb
CAediting_854934chr11_118538010_+SINEAluAluJb
CAediting_854935chr11_118538195_+SINEAluAluSx4
CAediting_854936chr11_118538197_+SINEAluAluSx4
CAediting_854937chr11_118538241_+SINEAluAluSx4
CAediting_854938chr11_118538265_+SINEAluAluSx4
CAediting_854939chr11_118538275_+SINEAluAluSx4
CAediting_854940chr11_118538289_+SINEAluAluSx4
CAediting_854941chr11_118538334_+SINEAluAluSx4
CAediting_854942chr11_118538343_+SINEAluAluSx4
CAediting_854943chr11_118538359_+SINEAluAluSx4
CAediting_854944chr11_118538366_+SINEAluAluSx4
CAediting_854945chr11_118538371_+SINEAluAluSx4
CAediting_854946chr11_118538391_+SINEAluAluSx4
CAediting_854947chr11_118538414_+SINEAluAluSx4
CAediting_854948chr11_118538427_+SINEAluAluSx4
CAediting_854949chr11_118538428_+SINEAluAluSx4
CAediting_854950chr11_118538429_+SINEAluAluSx4
CAediting_854951chr11_118538441_+SINEAluAluSx4
CAediting_854952chr11_118538615_+SINEAluAluSz
CAediting_854953chr11_118538631_+SINEAluAluSz
CAediting_854954chr11_118538637_+SINEAluAluSz
CAediting_854955chr11_118538709_+SINEAluAluSz
CAediting_854956chr11_118538714_+SINEAluAluSz
CAediting_854957chr11_118538717_+SINEAluAluSz
CAediting_854958chr11_118538782_+SINEAluAluSz
CAediting_854959chr11_118538844_+SINEAluAluSz
CAediting_854960chr11_118538896_+SINEAluAluSz
CAediting_854961chr11_118539232_+SINEAluAluSc
CAediting_854962chr11_118539268_+SINEAluAluSc
CAediting_854963chr11_118539294_+SINEAluAluSc
CAediting_854964chr11_118539365_+SINEAluAluSc
CAediting_854965chr11_118539377_+SINEAluAluSc
CAediting_854966chr11_118539428_+SINEAluAluSc
CAediting_854967chr11_118539440_+SINEAluAluSc
CAediting_854968chr11_118539446_+SINEAluAluSc
CAediting_854969chr11_118539486_+LINEL1L1MA4A
CAediting_854970chr11_118539743_+SINEAluAluSz
CAediting_854971chr11_118539747_+SINEAluAluSz
CAediting_854972chr11_118539749_+SINEAluAluSz
CAediting_854973chr11_118539757_+SINEAluAluSz
CAediting_854974chr11_118539759_+SINEAluAluSz
CAediting_854975chr11_118539765_+SINEAluAluSz
CAediting_854976chr11_118539766_+SINEAluAluSz
CAediting_854977chr11_118539768_+SINEAluAluSz
CAediting_854978chr11_118539796_+SINEAluAluSz
CAediting_854979chr11_118539814_+SINEAluAluSz
CAediting_854980chr11_118539861_+SINEAluAluSz
CAediting_854981chr11_118539865_+SINEAluAluSz
CAediting_854982chr11_118539870_+SINEAluAluSz
CAediting_854983chr11_118539874_+SINEAluAluSz
CAediting_854984chr11_118539933_+SINEAluAluSz
CAediting_854985chr11_118539942_+SINEAluAluSz
CAediting_854986chr11_118539949_+SINEAluAluSz
CAediting_854987chr11_118540129_+SINEAluAluYc
CAediting_854988chr11_118540131_+SINEAluAluYc
CAediting_854989chr11_118540184_+SINEAluAluYc
CAediting_854990chr11_118540190_+SINEAluAluYc
CAediting_854991chr11_118540214_+SINEAluAluYc
CAediting_854992chr11_118540239_+SINEAluAluYc
CAediting_854993chr11_118540249_+SINEAluAluYc
CAediting_854994chr11_118541341_+SINEAluAluY
CAediting_854995chr11_118541776_+SINEAluAluJb
CAediting_854996chr11_118541821_+SINEAluAluJb
CAediting_854997chr11_118541894_+SINEAluAluJb
CAediting_854998chr11_118541923_+SINEAluAluJb
CAediting_854999chr11_118541976_+SINEAluAluJb
CAediting_855000chr11_118541977_+SINEAluAluJb
CAediting_855001chr11_118541978_+SINEAluAluJb
CAediting_855002chr11_118541990_+SINEAluAluJb
CAediting_855003chr11_118541991_+SINEAluAluJb
CAediting_855004chr11_118541994_+SINEAluAluJb
CAediting_855005chr11_118542043_+SINEAluAluJb
CAediting_855006chr11_118542511_+SINEAluAluJr
CAediting_855007chr11_118543123_+SINEAluAluSc8
CAediting_855008chr11_118543907_+SINEAluAluSx4
CAediting_855009chr11_118543924_+SINEAluAluSx4
CAediting_855010chr11_118543946_+SINEAluAluSx4

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RNA A-to-I editing events in the alternative splicing sites for TMEM25

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_854998chr11_118541923_+118541921:1185419433SS0+18iCTAATTTTGTATTTTTTGTAGAG-14.21CTGATTTTGTATTTTTTGTAGAG-13.62

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000149582.14.TMEM25.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000149582.14.TMEM25.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMEM25

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TMEM25

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TMEM25

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000411589hsa-miR-605-3p1185346971185347037mer-m8118534682118534704142-16.29
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000411589hsa-miR-605-3p1185347141185347207mer-m8118534700118534721146-19.97
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000359862hsa-miR-605-3p1185346971185347037mer-m8118534682118534704142-16.29
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000359862hsa-miR-605-3p1185347141185347207mer-m8118534700118534721146-19.97
CAediting_980496chr14_31014685_-ENSG00000149582.14ENST00000442938hsa-miR-624-3p1185464791185464868mer-1a118546466118546486160-17.71
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000354064hsa-miR-605-3p1185346971185347037mer-m8118534682118534704142-16.29
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000354064hsa-miR-605-3p1185347141185347207mer-m8118534700118534721146-19.97
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000524725hsa-miR-605-3p1185346971185347037mer-m8118534682118534704142-16.29
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000524725hsa-miR-605-3p1185347141185347207mer-m8118534700118534721146-19.97
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000526853hsa-miR-605-3p1185346971185347037mer-m8118534682118534704142-16.29
CAediting_748296chr10_51299626_+ENSG00000149582.14ENST00000526853hsa-miR-605-3p1185347141185347207mer-m8118534700118534721146-19.97
CAediting_1351755chr19_40282625_-ENSG00000149582.14ENST00000411589hsa-miR-6411185355081185355147mer-m8118535491118535515157-19.32
CAediting_1351755chr19_40282625_-ENSG00000149582.14ENST00000359862hsa-miR-6411185355081185355147mer-m8118535491118535515157-19.32
CAediting_1229413chr17_67471544_+ENSG00000149582.14ENST00000442938hsa-miR-548aa1185469171185469237mer-m8118546895118546924149-14.8
CAediting_604450chr7_133034877_-ENSG00000149582.14ENST00000442938hsa-miR-36541185464111185464188mer-1a118546398118546418149-17.82
CAediting_524911chr7_5495852_-ENSG00000149582.14ENST00000442938hsa-miR-589-3p1185471461185471538mer-1a118547130118547153142-14.5
CAediting_396018chr5_1062918_-ENSG00000149582.14ENST00000525118hsa-miR-46351185323051185323128mer-1a118532292118532312145-16.83
CAediting_604450chr7_133034877_-ENSG00000149582.14ENST00000354284hsa-miR-36541185464111185464188mer-1a118546398118546418149-17.82
CAediting_1351755chr19_40282625_-ENSG00000149582.14ENST00000354064hsa-miR-6411185355081185355147mer-m8118535491118535515157-19.32
CAediting_1351755chr19_40282625_-ENSG00000149582.14ENST00000524725hsa-miR-6411185355081185355147mer-m8118535491118535515157-19.32
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000411589hsa-miR-6891-5p1185351911185351977mer-m8118535177118535198155-28.36
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000359862hsa-miR-6891-5p1185351911185351977mer-m8118535177118535198155-28.36
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000354064hsa-miR-6891-5p1185351911185351977mer-m8118535177118535198155-28.36
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000524725hsa-miR-6891-5p1185351911185351977mer-m8118535177118535198155-28.36

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1306324chr19_13836464_-ENSG00000149582.14ENST00000411589hsa-miR-27a-3p1185354621185354687mer-m8118535449118535469148-20.99
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000411589hsa-miR-6891-5p1185350121185350187mer-m8118535001118535019153-16.29
CAediting_1306324chr19_13836464_-ENSG00000149582.14ENST00000359862hsa-miR-27a-3p1185354621185354687mer-m8118535449118535469148-20.99
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000359862hsa-miR-6891-5p1185350121185350187mer-m8118535001118535019153-16.29
CAediting_688080chr9_63819626_+ENSG00000149582.14ENST00000525118hsa-miR-4477b1185324461185324527mer-m8118532430118532453141-11.4
CAediting_1306324chr19_13836464_-ENSG00000149582.14ENST00000354064hsa-miR-27a-3p1185354621185354687mer-m8118535449118535469148-20.99
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000354064hsa-miR-6891-5p1185350121185350187mer-m8118535001118535019153-16.29
CAediting_1306324chr19_13836464_-ENSG00000149582.14ENST00000524725hsa-miR-27a-3p1185354621185354687mer-m8118535449118535469148-20.99
CAediting_468389chr6_31355314_-ENSG00000149582.14ENST00000524725hsa-miR-6891-5p1185350121185350187mer-m8118535001118535019153-16.29

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TMEM25

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TMEM25

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_854862chr11_118536911_+1.24913502119538e-060.295879892795018....
BRCACAediting_854870chr11_118536975_+8.8366616162928e-090.430363689052587....
BRCACAediting_854873chr11_118536992_+3.59152530629651e-050.306995687335924....
BRCACAediting_854903chr11_118537357_+0.00675872473931750.34892583062307....
BRCACAediting_854906chr11_118537363_+0.02353293618902240.194134393254338....
BRCACAediting_854907chr11_118537371_+0.01184637273951720.293114519904795....

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Relation with cancer stages for TMEM25

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_854907chr11_118537371_+0.003624160472716910.338583720377081

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Relation with survival for TMEM25

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BRCACAediting_854903chr11_118537357_+0.03441337254099350.04547994.43896e-10

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RelatedDrugs for TMEM25

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TMEM25

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
TMEM25C0006142Malignant neoplasm of breast1CTD_human
TMEM25C0678222Breast Carcinoma1CTD_human
TMEM25C1257931Mammary Neoplasms, Human1CTD_human
TMEM25C1458155Mammary Neoplasms1CTD_human
TMEM25C4704874Mammary Carcinoma, Human1CTD_human