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Editing gene: ZNF594 (CAeditome ID:84622)

Gene summary for ZNF594

Gene summary

Gene information	Gene symbol	ZNF594
	Gene ID	84622
	Gene name	zinc finger protein 594
	Synonyms	-
	Cytomap	17p13.2
	Type of gene	protein-coding
	Description	zinc finger protein 594zinc finger protein HZF18
	Modification date	20210518
	UniProtAcc	Q96JF6
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ZNF594	GO:0005654	Zinc finger protein 594	0000052

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RNA A-to-I events for ZNF594

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000180626.9

RNA A-to-I editing events in Cancer.

CAediting_1158702(5180123, -), CAediting_1158703(5180128, -), CAediting_1158704(5180129, -), CAediting_1158705(5180150, -), CAediting_1158706(5180157, -), CAediting_1158707(5180158, -), CAediting_1158708(5180163, -), CAediting_1158709(5180177, -), CAediting_1158710(5180182, -), CAediting_1158711(5180217, -), CAediting_1158712(5180221, -), CAediting_1158713(5180225, -), CAediting_1158714(5180228, -), CAediting_1158715(5180230, -), CAediting_1158716(5180238, -), CAediting_1158717(5180240, -), CAediting_1158718(5180241, -), CAediting_1158719(5180244, -), CAediting_1158720(5180258, -), CAediting_1158721(5180261, -), CAediting_1158722(5180265, -), CAediting_1158723(5180270, -), CAediting_1158724(5180279, -), CAediting_1158725(5180286, -), CAediting_1158726(5180313, -), CAediting_1158727(5180322, -), CAediting_1158728(5180326, -), CAediting_1158729(5180342, -), CAediting_1158730(5180343, -), CAediting_1158731(5180349, -), CAediting_1158732(5180576, -), CAediting_1158733(5180588, -), CAediting_1158734(5180589, -), CAediting_1158735(5180598, -), CAediting_1158736(5180616, -), CAediting_1158737(5180641, -), CAediting_1158738(5180660, -), CAediting_1158739(5180663, -), CAediting_1158740(5180665, -), CAediting_1158741(5188859, -), CAediting_1158742(5188886, -), CAediting_1158743(5188912, -), CAediting_1158744(5188925, -), CAediting_1158745(5188931, -), CAediting_1158746(5188942, -), CAediting_1158747(5189310, -), CAediting_1158748(5189319, -), CAediting_1158749(5189324, -), CAediting_1158750(5189385, -), CAediting_1158751(5189466, -), CAediting_1158752(5189511, -), CAediting_1158753(5189512, -), CAediting_1158754(5189541, -), CAediting_1158755(5189546, -), CAediting_1158756(5189548, -), CAediting_1158757(5189627, -), CAediting_1158758(5189723, -), CAediting_1158759(5189790, -), CAediting_1158760(5189791, -), CAediting_1158761(5190101, -), CAediting_1158762(5190110, -),

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RNA editing positional annotations for ZNF594 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1158702	chr17_5180123_-	UTR3
CAediting_1158703	chr17_5180128_-	UTR3
CAediting_1158704	chr17_5180129_-	UTR3
CAediting_1158705	chr17_5180150_-	UTR3
CAediting_1158706	chr17_5180157_-	UTR3
CAediting_1158707	chr17_5180158_-	UTR3
CAediting_1158708	chr17_5180163_-	UTR3
CAediting_1158709	chr17_5180177_-	UTR3
CAediting_1158710	chr17_5180182_-	UTR3
CAediting_1158711	chr17_5180217_-	UTR3
CAediting_1158712	chr17_5180221_-	UTR3
CAediting_1158713	chr17_5180225_-	UTR3
CAediting_1158714	chr17_5180228_-	UTR3
CAediting_1158715	chr17_5180230_-	UTR3
CAediting_1158716	chr17_5180238_-	UTR3
CAediting_1158717	chr17_5180240_-	UTR3
CAediting_1158718	chr17_5180241_-	UTR3
CAediting_1158719	chr17_5180244_-	UTR3
CAediting_1158720	chr17_5180258_-	UTR3
CAediting_1158721	chr17_5180261_-	UTR3
CAediting_1158722	chr17_5180265_-	UTR3
CAediting_1158723	chr17_5180270_-	UTR3
CAediting_1158724	chr17_5180279_-	UTR3
CAediting_1158725	chr17_5180286_-	UTR3
CAediting_1158726	chr17_5180313_-	UTR3
CAediting_1158727	chr17_5180322_-	UTR3
CAediting_1158728	chr17_5180326_-	UTR3
CAediting_1158729	chr17_5180342_-	UTR3
CAediting_1158730	chr17_5180343_-	UTR3
CAediting_1158731	chr17_5180349_-	UTR3
CAediting_1158732	chr17_5180576_-	UTR3
CAediting_1158733	chr17_5180588_-	UTR3
CAediting_1158734	chr17_5180589_-	UTR3
CAediting_1158735	chr17_5180598_-	UTR3
CAediting_1158736	chr17_5180616_-	UTR3
CAediting_1158737	chr17_5180641_-	UTR3
CAediting_1158738	chr17_5180660_-	UTR3
CAediting_1158739	chr17_5180663_-	UTR3
CAediting_1158740	chr17_5180665_-	UTR3
CAediting_1158741	chr17_5188859_-	intronic
CAediting_1158742	chr17_5188886_-	intronic
CAediting_1158743	chr17_5188912_-	intronic
CAediting_1158744	chr17_5188925_-	intronic
CAediting_1158745	chr17_5188931_-	intronic
CAediting_1158746	chr17_5188942_-	intronic
CAediting_1158747	chr17_5189310_-	intronic
CAediting_1158748	chr17_5189319_-	intronic
CAediting_1158749	chr17_5189324_-	intronic
CAediting_1158750	chr17_5189385_-	intronic
CAediting_1158751	chr17_5189466_-	intronic
CAediting_1158752	chr17_5189511_-	intronic
CAediting_1158753	chr17_5189512_-	intronic
CAediting_1158754	chr17_5189541_-	intronic
CAediting_1158755	chr17_5189546_-	intronic
CAediting_1158756	chr17_5189548_-	intronic
CAediting_1158757	chr17_5189627_-	intronic
CAediting_1158758	chr17_5189723_-	intronic
CAediting_1158759	chr17_5189790_-	intronic
CAediting_1158760	chr17_5189791_-	intronic
CAediting_1158761	chr17_5190101_-	intronic
CAediting_1158762	chr17_5190110_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1158702	chr17_5180123_-	SINE	Alu	AluSx3
CAediting_1158703	chr17_5180128_-	SINE	Alu	AluSx3
CAediting_1158704	chr17_5180129_-	SINE	Alu	AluSx3
CAediting_1158705	chr17_5180150_-	SINE	Alu	AluSx3
CAediting_1158706	chr17_5180157_-	SINE	Alu	AluSx3
CAediting_1158707	chr17_5180158_-	SINE	Alu	AluSx3
CAediting_1158708	chr17_5180163_-	SINE	Alu	AluSx3
CAediting_1158709	chr17_5180177_-	SINE	Alu	AluSx3
CAediting_1158710	chr17_5180182_-	SINE	Alu	AluSx3
CAediting_1158711	chr17_5180217_-	SINE	Alu	AluSx3
CAediting_1158712	chr17_5180221_-	SINE	Alu	AluSx3
CAediting_1158713	chr17_5180225_-	SINE	Alu	AluSx3
CAediting_1158714	chr17_5180228_-	SINE	Alu	AluSx3
CAediting_1158715	chr17_5180230_-	SINE	Alu	AluSx3
CAediting_1158716	chr17_5180238_-	SINE	Alu	AluSx3
CAediting_1158717	chr17_5180240_-	SINE	Alu	AluSx3
CAediting_1158718	chr17_5180241_-	SINE	Alu	AluSx3
CAediting_1158719	chr17_5180244_-	SINE	Alu	AluSx3
CAediting_1158720	chr17_5180258_-	SINE	Alu	AluSx3
CAediting_1158721	chr17_5180261_-	SINE	Alu	AluSx3
CAediting_1158722	chr17_5180265_-	SINE	Alu	AluSx3
CAediting_1158723	chr17_5180270_-	SINE	Alu	AluSx3
CAediting_1158724	chr17_5180279_-	SINE	Alu	AluSx3
CAediting_1158725	chr17_5180286_-	SINE	Alu	AluSx3
CAediting_1158726	chr17_5180313_-	SINE	Alu	AluSx3
CAediting_1158727	chr17_5180322_-	SINE	Alu	AluSx3
CAediting_1158728	chr17_5180326_-	SINE	Alu	AluSx3
CAediting_1158729	chr17_5180342_-	SINE	Alu	AluSx3
CAediting_1158730	chr17_5180343_-	SINE	Alu	AluSx3
CAediting_1158731	chr17_5180349_-	SINE	Alu	AluSx3
CAediting_1158732	chr17_5180576_-	SINE	Alu	FLAM_C
CAediting_1158733	chr17_5180588_-	SINE	Alu	FLAM_C
CAediting_1158734	chr17_5180589_-	SINE	Alu	FLAM_C
CAediting_1158735	chr17_5180598_-	SINE	Alu	FLAM_C
CAediting_1158736	chr17_5180616_-	SINE	Alu	FLAM_C
CAediting_1158737	chr17_5180641_-	SINE	Alu	FLAM_C
CAediting_1158738	chr17_5180660_-	SINE	Alu	FLAM_C
CAediting_1158739	chr17_5180663_-	SINE	Alu	FLAM_C
CAediting_1158740	chr17_5180665_-	SINE	Alu	FLAM_C
CAediting_1158741	chr17_5188859_-	SINE	Alu	AluY
CAediting_1158742	chr17_5188886_-	SINE	Alu	AluY
CAediting_1158743	chr17_5188912_-	SINE	Alu	AluY
CAediting_1158744	chr17_5188925_-	SINE	Alu	AluY
CAediting_1158745	chr17_5188931_-	SINE	Alu	AluY
CAediting_1158746	chr17_5188942_-	SINE	Alu	AluY
CAediting_1158747	chr17_5189310_-	SINE	Alu	AluJr
CAediting_1158748	chr17_5189319_-	SINE	Alu	AluJr
CAediting_1158749	chr17_5189324_-	SINE	Alu	AluJr
CAediting_1158750	chr17_5189385_-	SINE	Alu	AluJr
CAediting_1158751	chr17_5189466_-	SINE	Alu	AluJr
CAediting_1158752	chr17_5189511_-	SINE	Alu	AluJr
CAediting_1158753	chr17_5189512_-	SINE	Alu	AluJr
CAediting_1158754	chr17_5189541_-	SINE	Alu	AluJr
CAediting_1158755	chr17_5189546_-	SINE	Alu	AluJr
CAediting_1158756	chr17_5189548_-	SINE	Alu	AluJr
CAediting_1158757	chr17_5189627_-	SINE	Alu	AluJr
CAediting_1158758	chr17_5189723_-	SINE	Alu	AluJr
CAediting_1158759	chr17_5189790_-	SINE	Alu	AluJr
CAediting_1158760	chr17_5189791_-	SINE	Alu	AluJr
CAediting_1158761	chr17_5190101_-	SINE	Alu	AluSx
CAediting_1158762	chr17_5190110_-	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for ZNF594

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000180626.9.ZNF594.

Correlation between RNA A-to-I editing and PSI for ENSG00000180626.9.ZNF594.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF594

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF594

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF594

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1158709	chr17_5180177_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6849-3p	5180176	5180182	7mer-m8	5180175	5180197	149.00	-18.05
CAediting_1158722	chr17_5180265_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3064-5p	5180265	5180271	7mer-m8	5180264	5180285	147.00	-18.00
CAediting_1158722	chr17_5180265_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3085-3p	5180265	5180271	7mer-m8	5180264	5180285	145.00	-18.66
CAediting_1158722	chr17_5180265_-	ENSG00000180626.9	ENST00000399604	hsa-miR-5580-5p	5180263	5180270	8mer-1a	5180263	5180284	140.00	-17.86
CAediting_1158722	chr17_5180265_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6504-5p	5180265	5180271	7mer-m8	5180264	5180286	157.00	-19.12
CAediting_1158728	chr17_5180326_-	ENSG00000180626.9	ENST00000399604	hsa-miR-150-5p	5180326	5180332	7mer-m8	5180325	5180346	140.00	-15.80
CAediting_1158728	chr17_5180326_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6778-3p	5180324	5180330	7mer-m8	5180323	5180343	143.00	-13.97
CAediting_1158728	chr17_5180326_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6878-3p	5180321	5180328	8mer-1a	5180321	5180341	142.00	-14.61
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378a-3p	5180337	5180343	7mer-m8	5180336	5180357	146.00	-17.62
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378b	5180337	5180343	7mer-m8	5180336	5180353	146.00	-17.66
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378c	5180337	5180343	7mer-m8	5180336	5180360	146.00	-18.43
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378d	5180337	5180343	7mer-m8	5180336	5180355	146.00	-15.19
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378d	5180337	5180343	7mer-m8	5180336	5180355	146.00	-15.19
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378e	5180337	5180343	7mer-m8	5180336	5180354	142.00	-18.17
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378f	5180337	5180343	7mer-m8	5180336	5180357	144.00	-19.91
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378h	5180337	5180343	7mer-m8	5180336	5180358	148.00	-19.85
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378i	5180337	5180343	7mer-m8	5180336	5180356	154.00	-16.52
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-422a	5180337	5180343	7mer-m8	5180336	5180357	154.00	-18.87
CAediting_1158731	chr17_5180349_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3622a-5p	5180346	5180352	7mer-m8	5180345	5180368	151.00	-26.08
CAediting_1158731	chr17_5180349_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4269	5180345	5180351	7mer-m8	5180344	5180368	156.00	-29.64
CAediting_1158731	chr17_5180349_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6715b-5p	5180345	5180351	7mer-m8	5180344	5180364	150.00	-21.37
CAediting_1158703	chr17_5180128_-	ENSG00000180626.9	ENST00000399604	hsa-miR-149-5p	5180128	5180134	7mer-m8	5180127	5180152	158.00	-30.08
CAediting_1158704	chr17_5180129_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4638-5p	5180126	5180133	8mer-1a	5180126	5180147	144.00	-20.60
CAediting_1158705	chr17_5180150_-	ENSG00000180626.9	ENST00000399604	hsa-miR-361-3p	5180149	5180155	7mer-m8	5180148	5180174	169.00	-32.88
CAediting_1158706	chr17_5180157_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3155a	5180153	5180159	7mer-m8	5180152	5180170	145.00	-24.35
CAediting_1158706	chr17_5180157_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3155b	5180153	5180159	7mer-m8	5180152	5180167	145.00	-23.45
CAediting_1158706	chr17_5180157_-	ENSG00000180626.9	ENST00000399604	hsa-miR-484	5180153	5180159	7mer-m8	5180152	5180178	150.00	-27.28
CAediting_1158707	chr17_5180158_-	ENSG00000180626.9	ENST00000399604	hsa-miR-9900	5180153	5180159	7mer-m8	5180152	5180171	155.00	-17.10
CAediting_1158713	chr17_5180225_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3190-5p	5180220	5180226	7mer-m8	5180219	5180238	143.00	-16.24
CAediting_1158713	chr17_5180225_-	ENSG00000180626.9	ENST00000399604	hsa-miR-548s	5180221	5180227	7mer-m8	5180220	5180240	150.00	-14.59
CAediting_1158715	chr17_5180230_-	ENSG00000180626.9	ENST00000399604	hsa-miR-578	5180228	5180234	7mer-m8	5180227	5180247	141.00	-7.83
CAediting_1158717	chr17_5180240_-	ENSG00000180626.9	ENST00000399604	hsa-miR-325	5180239	5180246	8mer-1a	5180239	5180261	141.00	-10.23
CAediting_1158719	chr17_5180244_-	ENSG00000180626.9	ENST00000399604	hsa-miR-374b-3p	5180239	5180246	8mer-1a	5180239	5180260	141.00	-9.94
CAediting_1158720	chr17_5180258_-	ENSG00000180626.9	ENST00000399604	hsa-miR-30a-3p	5180255	5180261	7mer-m8	5180254	5180272	155.00	-11.92
CAediting_1158720	chr17_5180258_-	ENSG00000180626.9	ENST00000399604	hsa-miR-30d-3p	5180255	5180261	7mer-m8	5180254	5180272	160.00	-16.30
CAediting_1158720	chr17_5180258_-	ENSG00000180626.9	ENST00000399604	hsa-miR-30e-3p	5180255	5180261	7mer-m8	5180254	5180275	149.00	-8.83
CAediting_1158724	chr17_5180279_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4766-3p	5180276	5180281	6mer	5180275	5180295	143.00	-18.03
CAediting_1158727	chr17_5180322_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4638-5p	5180320	5180326	7mer-m8	5180319	5180339	142.00	-16.85
CAediting_1158730	chr17_5180343_-	ENSG00000180626.9	ENST00000399604	hsa-miR-513a-5p	5180342	5180348	7mer-m8	5180341	5180358	152.00	-17.43
CAediting_1158730	chr17_5180343_-	ENSG00000180626.9	ENST00000399604	hsa-miR-513a-5p	5180342	5180348	7mer-m8	5180341	5180358	152.00	-17.43
CAediting_1158733	chr17_5180588_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3189-3p	5180587	5180593	7mer-m8	5180586	5180608	157.00	-29.82
CAediting_1158734	chr17_5180589_-	ENSG00000180626.9	ENST00000399604	hsa-miR-2276-5p	5180585	5180591	7mer-m8	5180584	5180605	148.00	-16.51
CAediting_1158734	chr17_5180589_-	ENSG00000180626.9	ENST00000399604	hsa-miR-326	5180587	5180593	7mer-m8	5180586	5180605	140.00	-18.10
CAediting_1158734	chr17_5180589_-	ENSG00000180626.9	ENST00000399604	hsa-miR-330-5p	5180587	5180593	7mer-m8	5180586	5180609	141.00	-20.61
CAediting_1158734	chr17_5180589_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4314	5180588	5180594	7mer-m8	5180587	5180605	141.00	-20.89
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-151a-5p	5180598	5180604	7mer-m8	5180597	5180618	141.00	-17.84
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-151b	5180598	5180604	7mer-m8	5180597	5180614	140.00	-15.96
CAediting_1158737	chr17_5180641_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3940-3p	5180637	5180643	7mer-m8	5180636	5180657	142.00	-21.15
CAediting_1158737	chr17_5180641_-	ENSG00000180626.9	ENST00000399604	hsa-miR-7112-5p	5180641	5180646	6mer	5180640	5180662	142.00	-23.70
CAediting_1158740	chr17_5180665_-	ENSG00000180626.9	ENST00000399604	hsa-miR-188-5p	5180662	5180668	7mer-m8	5180661	5180682	158.00	-18.89
CAediting_1158740	chr17_5180665_-	ENSG00000180626.9	ENST00000399604	hsa-miR-204-5p	5180663	5180669	7mer-m8	5180662	5180682	155.00	-13.91
CAediting_1158740	chr17_5180665_-	ENSG00000180626.9	ENST00000399604	hsa-miR-211-5p	5180663	5180669	7mer-m8	5180662	5180682	151.00	-13.37
CAediting_1158740	chr17_5180665_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6866-3p	5180662	5180668	7mer-m8	5180661	5180682	159.00	-11.40
CAediting_1158718	chr17_5180241_-	ENSG00000180626.9	ENST00000399604	hsa-miR-222-5p	5180239	5180246	8mer-1a	5180239	5180260	140.00	-9.13
CAediting_1158718	chr17_5180241_-	ENSG00000180626.9	ENST00000399604	hsa-miR-30a-3p	5180237	5180244	8mer-1a	5180237	5180259	149.00	-11.42
CAediting_1158718	chr17_5180241_-	ENSG00000180626.9	ENST00000399604	hsa-miR-30d-3p	5180237	5180244	8mer-1a	5180237	5180259	149.00	-12.11
CAediting_1158718	chr17_5180241_-	ENSG00000180626.9	ENST00000399604	hsa-miR-30e-3p	5180237	5180244	8mer-1a	5180237	5180259	149.00	-11.42
CAediting_1158718	chr17_5180241_-	ENSG00000180626.9	ENST00000399604	hsa-miR-936	5180240	5180247	8mer-1a	5180240	5180261	150.00	-17.75

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-10399-5p	5180341	5180347	7mer-m8	5180340	5180361	144	-12.25
CAediting_1158730	chr17_5180343_-	ENSG00000180626.9	ENST00000399604	hsa-miR-10399-5p	5180341	5180347	7mer-m8	5180340	5180361	144	-12.25
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-1285-3p	5180269	5180275	7mer-m8	5180268	5180290	142	-20.68
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-1285-3p	5180269	5180275	7mer-m8	5180268	5180290	142	-20.68
CAediting_1158705	chr17_5180150_-	ENSG00000180626.9	ENST00000399604	hsa-miR-1306-5p	5180146	5180152	7mer-m8	5180145	5180166	147	-23
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3187-5p	5180269	5180275	7mer-m8	5180268	5180290	145	-19.6
CAediting_1158729	chr17_5180342_-	ENSG00000180626.9	ENST00000399604	hsa-miR-378j	5180337	5180343	7mer-m8	5180336	5180356	144	-15.75
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-3929	5180594	5180600	7mer-m8	5180593	5180615	150	-19.87
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4478	5180594	5180600	7mer-m8	5180593	5180607	152	-23.5
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4505	5180266	5180273	8mer-1a	5180266	5180284	149	-20.75
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4689	5180598	5180604	7mer-m8	5180597	5180619	147	-23.64
CAediting_1158713	chr17_5180225_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4735-5p	5180224	5180230	7mer-m8	5180223	5180244	140	-4.28
CAediting_1158714	chr17_5180228_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4735-5p	5180224	5180230	7mer-m8	5180223	5180244	140	-4.28
CAediting_1158739	chr17_5180663_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4753-3p	5180663	5180669	7mer-m8	5180662	5180683	144	-7.46
CAediting_1158740	chr17_5180665_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4753-3p	5180663	5180669	7mer-m8	5180662	5180683	144	-7.46
CAediting_1158724	chr17_5180279_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4764-3p	5180279	5180285	7mer-m8	5180278	5180301	147	-13.32
CAediting_1158713	chr17_5180225_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4775	5180225	5180231	7mer-m8	5180224	5180247	153	-6.49
CAediting_1158714	chr17_5180228_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4775	5180225	5180231	7mer-m8	5180224	5180247	153	-6.49
CAediting_1158715	chr17_5180230_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4775	5180225	5180231	7mer-m8	5180224	5180247	153	-6.49
CAediting_1158722	chr17_5180265_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4781-3p	5180261	5180268	8mer-1a	5180261	5180282	140	-12.05
CAediting_1158712	chr17_5180221_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4794	5180220	5180226	7mer-m8	5180219	5180240	140	-12.56
CAediting_1158713	chr17_5180225_-	ENSG00000180626.9	ENST00000399604	hsa-miR-4794	5180220	5180226	7mer-m8	5180219	5180240	140	-12.56
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-485-5p	5180593	5180599	7mer-m8	5180592	5180614	151	-14.39
CAediting_1158737	chr17_5180641_-	ENSG00000180626.9	ENST00000399604	hsa-miR-5189-5p	5180640	5180646	7mer-m8	5180639	5180661	147	-21.36
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-5189-5p	5180269	5180275	7mer-m8	5180268	5180291	147	-16.43
CAediting_1158721	chr17_5180261_-	ENSG00000180626.9	ENST00000399604	hsa-miR-567	5180260	5180266	7mer-m8	5180259	5180279	142	-11.4
CAediting_1158722	chr17_5180265_-	ENSG00000180626.9	ENST00000399604	hsa-miR-567	5180260	5180266	7mer-m8	5180259	5180279	142	-11.4
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-5787	5180266	5180273	8mer-1a	5180266	5180284	143	-18.89
CAediting_1158738	chr17_5180660_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6072	5180658	5180664	7mer-m8	5180657	5180678	152	-13.13
CAediting_1158739	chr17_5180663_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6072	5180658	5180664	7mer-m8	5180657	5180678	152	-13.13
CAediting_1158737	chr17_5180641_-	ENSG00000180626.9	ENST00000399604	hsa-miR-612	5180640	5180646	7mer-m8	5180639	5180662	152	-23.73
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-612	5180269	5180275	7mer-m8	5180268	5180296	152	-27.76
CAediting_1158736	chr17_5180616_-	ENSG00000180626.9	ENST00000399604	hsa-miR-636	5180611	5180617	7mer-m8	5180610	5180632	140	-15.83
CAediting_1158737	chr17_5180641_-	ENSG00000180626.9	ENST00000399604	hsa-miR-661	5180638	5180644	7mer-m8	5180637	5180661	142	-21.43
CAediting_1158712	chr17_5180221_-	ENSG00000180626.9	ENST00000399604	hsa-miR-664a-5p	5180220	5180226	7mer-m8	5180219	5180242	141	-13.1
CAediting_1158713	chr17_5180225_-	ENSG00000180626.9	ENST00000399604	hsa-miR-664a-5p	5180220	5180226	7mer-m8	5180219	5180242	141	-13.1
CAediting_1158727	chr17_5180322_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6813-3p	5180318	5180324	7mer-m8	5180317	5180337	150	-18.9
CAediting_1158719	chr17_5180244_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6832-5p	5180243	5180249	7mer-m8	5180242	5180264	147	-17.65
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6842-3p	5180265	5180272	8mer-1a	5180265	5180289	145	-22.98
CAediting_1158740	chr17_5180665_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6844	5180665	5180671	7mer-m8	5180664	5180685	153	-8.26
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6858-5p	5180598	5180604	7mer-m8	5180597	5180618	151	-23.15
CAediting_1158737	chr17_5180641_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6860	5180640	5180646	7mer-m8	5180639	5180657	152	-24.98
CAediting_1158723	chr17_5180270_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6860	5180269	5180275	7mer-m8	5180268	5180289	143	-16.2
CAediting_1158711	chr17_5180217_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6872-3p	5180214	5180220	7mer-m8	5180213	5180233	145	-14.21
CAediting_1158738	chr17_5180660_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6891-3p	5180658	5180664	7mer-m8	5180657	5180677	146	-12.88
CAediting_1158739	chr17_5180663_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6891-3p	5180658	5180664	7mer-m8	5180657	5180677	146	-12.88
CAediting_1158735	chr17_5180598_-	ENSG00000180626.9	ENST00000399604	hsa-miR-7160-5p	5180596	5180602	7mer-m8	5180595	5180615	151	-23
CAediting_1158708	chr17_5180163_-	ENSG00000180626.9	ENST00000399604	hsa-miR-8062	5180161	5180167	7mer-m8	5180160	5180180	141	-10.43
CAediting_1158709	chr17_5180177_-	ENSG00000180626.9	ENST00000399604	hsa-miR-874-3p	5180172	5180177	6mer	5180171	5180194	154	-33.95
CAediting_1158734	chr17_5180589_-	ENSG00000180626.9	ENST00000399604	hsa-miR-887-5p	5180588	5180595	8mer-1a	5180588	5180607	143	-13.95
CAediting_1158737	chr17_5180641_-	ENSG00000180626.9	ENST00000399604	hsa-miR-939-3p	5180639	5180645	7mer-m8	5180638	5180658	140	-15.63

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000180626.9	ENST00000399604	hsa-miR-624-3p	5180386	5180392	7mer-m8	5180385	5180404	149	-18.39
CAediting_688080	chr9_63819626_+	ENSG00000180626.9	ENST00000399604	hsa-miR-4477b	5181505	5181512	8mer-1a	5181505	5181526	160	-15.99
CAediting_228905	chr2_188297554_+	ENSG00000180626.9	ENST00000399604	hsa-miR-561-3p	5180624	5180629	6mer	5180623	5180646	145	-16.6
CAediting_228905	chr2_188297554_+	ENSG00000180626.9	ENST00000399604	hsa-miR-561-3p	5181531	5181537	7mer-m8	5181530	5181554	151	-13.93
CAediting_468389	chr6_31355314_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6891-5p	5180606	5180611	6mer	5180598	5180614	153	-25.98
CAediting_468389	chr6_31355314_-	ENSG00000180626.9	ENST00000399604	hsa-miR-6891-5p	5180598	5180605	8mer-1a	5180598	5180614	153	-25.98

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_228905	chr2_188297554_+	ENSG00000180626.9	ENST00000399604	hsa-miR-561-3p	5179949	5179954	6mer	5179948	5179969	140	-13.02
CAediting_228905	chr2_188297554_+	ENSG00000180626.9	ENST00000399604	hsa-miR-561-3p	5181287	5181293	7mer-m8	5181286	5181310	146	-6.25
CAediting_980496	chr14_31014685_-	ENSG00000180626.9	ENST00000399604	hsa-miR-624-3p	5181677	5181683	7mer-m8	5181676	5181696	140	-13.32
CAediting_980496	chr14_31014685_-	ENSG00000180626.9	ENST00000399604	hsa-miR-624-3p	5181098	5181104	7mer-m8	5181097	5181118	154	-10.07

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF594

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF594

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ZNF594

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF594

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF594

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF594

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene