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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TTF2 (CAeditome ID:8458)

Gene summary for TTF2

check button Gene summary
Gene informationGene symbol

TTF2

Gene ID

8458

Gene nametranscription termination factor 2
SynonymsF2|HuF2|ZGRF6
Cytomap

1p13.1

Type of geneprotein-coding
Descriptiontranscription termination factor 2RNA polymerase II termination factorhuman factor 2lodestar homologlodestar proteintranscription release factor 2transcription termination factor, RNA polymerase IIzinc finger, GRF-type containing 6
Modification date20210518
UniProtAcc

Q9UNY4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TTF2

GO:0008094

Transcription termination factor 2

9748214

TTF2

GO:0005829

Transcription termination factor 2

0000052


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RNA A-to-I events for TTF2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000116830.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_90750(117064214, +), CAediting_90751(117064231, +), CAediting_90752(117067270, +), CAediting_90753(117067298, +), CAediting_90754(117067317, +), CAediting_90755(117067322, +), CAediting_90756(117067330, +), CAediting_90757(117067356, +), CAediting_90758(117067368, +), CAediting_90759(117067369, +), CAediting_90760(117067370, +), CAediting_90761(117067380, +), CAediting_90762(117067391, +), CAediting_90763(117067436, +), CAediting_90764(117067439, +), CAediting_90765(117067445, +), CAediting_90766(117067454, +), CAediting_90767(117067470, +), CAediting_90768(117067474, +), CAediting_90769(117067475, +), CAediting_90770(117067496, +), CAediting_90771(117082233, +), CAediting_90772(117082235, +), CAediting_90773(117082282, +), CAediting_90774(117082292, +), CAediting_90775(117082297, +), CAediting_90776(117082298, +), CAediting_90777(117082312, +), CAediting_90778(117082313, +), CAediting_90779(117082317, +), CAediting_90780(117082330, +), CAediting_90781(117082339, +), CAediting_90782(117082342, +), CAediting_90783(117082352, +), CAediting_90784(117082354, +), CAediting_90785(117082355, +), CAediting_90786(117082378, +), CAediting_90787(117082379, +), CAediting_90788(117082386, +), CAediting_90789(117082397, +), CAediting_90790(117082411, +), CAediting_90791(117082414, +), CAediting_90792(117082433, +), CAediting_90793(117082434, +), CAediting_90794(117082435, +), CAediting_90795(117082447, +), CAediting_90796(117082448, +), CAediting_90797(117082451, +), CAediting_90798(117082452, +), CAediting_90799(117082465, +), CAediting_90800(117082489, +), CAediting_90801(117082711, +), CAediting_90802(117082715, +), CAediting_90803(117082737, +), CAediting_90804(117082755, +), CAediting_90805(117082761, +), CAediting_90806(117082766, +), CAediting_90807(117082770, +), CAediting_90808(117082775, +), CAediting_90809(117082795, +), CAediting_90810(117082807, +), CAediting_90811(117082810, +), CAediting_90812(117082811, +), CAediting_90813(117082987, +), CAediting_90814(117082988, +), CAediting_90815(117083063, +), CAediting_90816(117083064, +), CAediting_90817(117083065, +), CAediting_90818(117083076, +), CAediting_90819(117083079, +), CAediting_90820(117083082, +), CAediting_90821(117083090, +), CAediting_90822(117083091, +), CAediting_90823(117083092, +), CAediting_90824(117083095, +), CAediting_90825(117083099, +), CAediting_90826(117083100, +), CAediting_90827(117083121, +), CAediting_90828(117083131, +), CAediting_90829(117083148, +), CAediting_90830(117083162, +), CAediting_90831(117083224, +), CAediting_90832(117083838, +), CAediting_90833(117083839, +), CAediting_90834(117083859, +), CAediting_90835(117083878, +), CAediting_90836(117083879, +), CAediting_90837(117083883, +), CAediting_90838(117083892, +), CAediting_90839(117083929, +), CAediting_90840(117083932, +), CAediting_90841(117085298, +), CAediting_90842(117085299, +), CAediting_90843(117085388, +), CAediting_90844(117085402, +), CAediting_90845(117085406, +), CAediting_90846(117085432, +), CAediting_90847(117085473, +), CAediting_90848(117087324, +), CAediting_90849(117087392, +), CAediting_90850(117087493, +), CAediting_90851(117088355, +), CAediting_90852(117088360, +), CAediting_90853(117088371, +), CAediting_90854(117088380, +), CAediting_90855(117088382, +), CAediting_90856(117088383, +), CAediting_90857(117088390, +), CAediting_90858(117088433, +), CAediting_90859(117088439, +), CAediting_90860(117088443, +), CAediting_90861(117088446, +), CAediting_90862(117088448, +), CAediting_90863(117088449, +), CAediting_90864(117088457, +), CAediting_90865(117088458, +), CAediting_90866(117088465, +), CAediting_90867(117088482, +), CAediting_90868(117088525, +), CAediting_90869(117101887, +), CAediting_90870(117101893, +), CAediting_90871(117101903, +), CAediting_90872(117101913, +), CAediting_90873(117101935, +), CAediting_90874(117101940, +), CAediting_90875(117101941, +), CAediting_90876(117101958, +), CAediting_90877(117101960, +), CAediting_90878(117101966, +), CAediting_90879(117101980, +), CAediting_90880(117101999, +), CAediting_90881(117102008, +), CAediting_90882(117102013, +), CAediting_90883(117102044, +), CAediting_90884(117102048, +), CAediting_90885(117102067, +), CAediting_90886(117102102, +), CAediting_90887(117102112, +), CAediting_90888(117103376, +), CAediting_90889(117103379, +), CAediting_90890(117103380, +), CAediting_90891(117103390, +), CAediting_90892(117103391, +), CAediting_90893(117103398, +), CAediting_90894(117103406, +), CAediting_90895(117103407, +), CAediting_90896(117103862, +), CAediting_90897(117103865, +), CAediting_90898(117103873, +), CAediting_90899(117103874, +), CAediting_90900(117103894, +), CAediting_90901(117103903, +), CAediting_90902(117105497, +), CAediting_90903(117105645, +), CAediting_90904(117105656, +), CAediting_90905(117105705, +), CAediting_90906(117105708, +), CAediting_90907(117105723, +), CAediting_90908(117105730, +), CAediting_90909(117105733, +), CAediting_90910(117105741, +), CAediting_90911(117105742, +), CAediting_90912(117105757, +), CAediting_90913(117106279, +), CAediting_90914(117106286, +), CAediting_90915(117106290, +), CAediting_90916(117106291, +), CAediting_90917(117106301, +), CAediting_90918(117106307, +), CAediting_90919(117106316, +),

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RNA editing positional annotations for TTF2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_90750chr1_117064214_+ncRNA_intronic
CAediting_90751chr1_117064231_+ncRNA_intronic
CAediting_90752chr1_117067270_+ncRNA_intronic
CAediting_90753chr1_117067298_+ncRNA_intronic
CAediting_90754chr1_117067317_+ncRNA_intronic
CAediting_90755chr1_117067322_+ncRNA_intronic
CAediting_90756chr1_117067330_+ncRNA_intronic
CAediting_90757chr1_117067356_+ncRNA_intronic
CAediting_90758chr1_117067368_+ncRNA_intronic
CAediting_90759chr1_117067369_+ncRNA_intronic
CAediting_90760chr1_117067370_+ncRNA_intronic
CAediting_90761chr1_117067380_+ncRNA_intronic
CAediting_90762chr1_117067391_+ncRNA_intronic
CAediting_90763chr1_117067436_+ncRNA_intronic
CAediting_90764chr1_117067439_+ncRNA_intronic
CAediting_90765chr1_117067445_+ncRNA_intronic
CAediting_90766chr1_117067454_+ncRNA_intronic
CAediting_90767chr1_117067470_+ncRNA_intronic
CAediting_90768chr1_117067474_+ncRNA_intronic
CAediting_90769chr1_117067475_+ncRNA_intronic
CAediting_90770chr1_117067496_+ncRNA_intronic
CAediting_90771chr1_117082233_+intronic
CAediting_90772chr1_117082235_+intronic
CAediting_90773chr1_117082282_+intronic
CAediting_90774chr1_117082292_+intronic
CAediting_90775chr1_117082297_+intronic
CAediting_90776chr1_117082298_+intronic
CAediting_90777chr1_117082312_+intronic
CAediting_90778chr1_117082313_+intronic
CAediting_90779chr1_117082317_+intronic
CAediting_90780chr1_117082330_+intronic
CAediting_90781chr1_117082339_+intronic
CAediting_90782chr1_117082342_+intronic
CAediting_90783chr1_117082352_+intronic
CAediting_90784chr1_117082354_+intronic
CAediting_90785chr1_117082355_+intronic
CAediting_90786chr1_117082378_+intronic
CAediting_90787chr1_117082379_+intronic
CAediting_90788chr1_117082386_+intronic
CAediting_90789chr1_117082397_+intronic
CAediting_90790chr1_117082411_+intronic
CAediting_90791chr1_117082414_+intronic
CAediting_90792chr1_117082433_+intronic
CAediting_90793chr1_117082434_+intronic
CAediting_90794chr1_117082435_+intronic
CAediting_90795chr1_117082447_+intronic
CAediting_90796chr1_117082448_+intronic
CAediting_90797chr1_117082451_+intronic
CAediting_90798chr1_117082452_+intronic
CAediting_90799chr1_117082465_+intronic
CAediting_90800chr1_117082489_+intronic
CAediting_90801chr1_117082711_+intronic
CAediting_90802chr1_117082715_+intronic
CAediting_90803chr1_117082737_+intronic
CAediting_90804chr1_117082755_+intronic
CAediting_90805chr1_117082761_+intronic
CAediting_90806chr1_117082766_+intronic
CAediting_90807chr1_117082770_+intronic
CAediting_90808chr1_117082775_+intronic
CAediting_90809chr1_117082795_+intronic
CAediting_90810chr1_117082807_+intronic
CAediting_90811chr1_117082810_+intronic
CAediting_90812chr1_117082811_+intronic
CAediting_90813chr1_117082987_+intronic
CAediting_90814chr1_117082988_+intronic
CAediting_90815chr1_117083063_+intronic
CAediting_90816chr1_117083064_+intronic
CAediting_90817chr1_117083065_+intronic
CAediting_90818chr1_117083076_+intronic
CAediting_90819chr1_117083079_+intronic
CAediting_90820chr1_117083082_+intronic
CAediting_90821chr1_117083090_+intronic
CAediting_90822chr1_117083091_+intronic
CAediting_90823chr1_117083092_+intronic
CAediting_90824chr1_117083095_+intronic
CAediting_90825chr1_117083099_+intronic
CAediting_90826chr1_117083100_+intronic
CAediting_90827chr1_117083121_+intronic
CAediting_90828chr1_117083131_+intronic
CAediting_90829chr1_117083148_+intronic
CAediting_90830chr1_117083162_+intronic
CAediting_90831chr1_117083224_+intronic
CAediting_90832chr1_117083838_+intronic
CAediting_90833chr1_117083839_+intronic
CAediting_90834chr1_117083859_+intronic
CAediting_90835chr1_117083878_+intronic
CAediting_90836chr1_117083879_+intronic
CAediting_90837chr1_117083883_+intronic
CAediting_90838chr1_117083892_+intronic
CAediting_90839chr1_117083929_+intronic
CAediting_90840chr1_117083932_+intronic
CAediting_90841chr1_117085298_+intronic
CAediting_90842chr1_117085299_+intronic
CAediting_90843chr1_117085388_+intronic
CAediting_90844chr1_117085402_+intronic
CAediting_90845chr1_117085406_+intronic
CAediting_90846chr1_117085432_+intronic
CAediting_90847chr1_117085473_+intronic
CAediting_90848chr1_117087324_+intronic
CAediting_90849chr1_117087392_+intronic
CAediting_90850chr1_117087493_+intronic
CAediting_90851chr1_117088355_+intronic
CAediting_90852chr1_117088360_+intronic
CAediting_90853chr1_117088371_+intronic
CAediting_90854chr1_117088380_+intronic
CAediting_90855chr1_117088382_+intronic
CAediting_90856chr1_117088383_+intronic
CAediting_90857chr1_117088390_+intronic
CAediting_90858chr1_117088433_+intronic
CAediting_90859chr1_117088439_+intronic
CAediting_90860chr1_117088443_+intronic
CAediting_90861chr1_117088446_+intronic
CAediting_90862chr1_117088448_+intronic
CAediting_90863chr1_117088449_+intronic
CAediting_90864chr1_117088457_+intronic
CAediting_90865chr1_117088458_+intronic
CAediting_90866chr1_117088465_+intronic
CAediting_90867chr1_117088482_+intronic
CAediting_90868chr1_117088525_+intronic
CAediting_90869chr1_117101887_+UTR3
CAediting_90870chr1_117101893_+UTR3
CAediting_90871chr1_117101903_+UTR3
CAediting_90872chr1_117101913_+UTR3
CAediting_90873chr1_117101935_+UTR3
CAediting_90874chr1_117101940_+UTR3
CAediting_90875chr1_117101941_+UTR3
CAediting_90876chr1_117101958_+UTR3
CAediting_90877chr1_117101960_+UTR3
CAediting_90878chr1_117101966_+UTR3
CAediting_90879chr1_117101980_+UTR3
CAediting_90880chr1_117101999_+UTR3
CAediting_90881chr1_117102008_+UTR3
CAediting_90882chr1_117102013_+UTR3
CAediting_90883chr1_117102044_+UTR3
CAediting_90884chr1_117102048_+UTR3
CAediting_90885chr1_117102067_+UTR3
CAediting_90886chr1_117102102_+UTR3
CAediting_90887chr1_117102112_+UTR3
CAediting_90888chr1_117103376_+UTR3
CAediting_90889chr1_117103379_+UTR3
CAediting_90890chr1_117103380_+UTR3
CAediting_90891chr1_117103390_+UTR3
CAediting_90892chr1_117103391_+UTR3
CAediting_90893chr1_117103398_+UTR3
CAediting_90894chr1_117103406_+UTR3
CAediting_90895chr1_117103407_+UTR3
CAediting_90896chr1_117103862_+UTR3
CAediting_90897chr1_117103865_+UTR3
CAediting_90898chr1_117103873_+UTR3
CAediting_90899chr1_117103874_+UTR3
CAediting_90900chr1_117103894_+UTR3
CAediting_90901chr1_117103903_+UTR3
CAediting_90902chr1_117105497_+UTR3
CAediting_90903chr1_117105645_+UTR3
CAediting_90904chr1_117105656_+UTR3
CAediting_90905chr1_117105705_+UTR3
CAediting_90906chr1_117105708_+UTR3
CAediting_90907chr1_117105723_+UTR3
CAediting_90908chr1_117105730_+UTR3
CAediting_90909chr1_117105733_+UTR3
CAediting_90910chr1_117105741_+UTR3
CAediting_90911chr1_117105742_+UTR3
CAediting_90912chr1_117105757_+UTR3
CAediting_90913chr1_117106279_+UTR3
CAediting_90914chr1_117106286_+UTR3
CAediting_90915chr1_117106290_+UTR3
CAediting_90916chr1_117106291_+UTR3
CAediting_90917chr1_117106301_+UTR3
CAediting_90918chr1_117106307_+UTR3
CAediting_90919chr1_117106316_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_90750chr1_117064214_+SINEAluAluSz
CAediting_90751chr1_117064231_+SINEAluAluSz
CAediting_90752chr1_117067270_+SINEAluAluSz
CAediting_90753chr1_117067298_+SINEAluAluSz
CAediting_90754chr1_117067317_+SINEAluAluSz
CAediting_90755chr1_117067322_+SINEAluAluSz
CAediting_90756chr1_117067330_+SINEAluAluSz
CAediting_90757chr1_117067356_+SINEAluAluSz
CAediting_90758chr1_117067368_+SINEAluAluSz
CAediting_90759chr1_117067369_+SINEAluAluSz
CAediting_90760chr1_117067370_+SINEAluAluSz
CAediting_90761chr1_117067380_+SINEAluAluSz
CAediting_90762chr1_117067391_+SINEAluAluSz
CAediting_90763chr1_117067436_+SINEAluAluSz
CAediting_90764chr1_117067439_+SINEAluAluSz
CAediting_90765chr1_117067445_+SINEAluAluSz
CAediting_90766chr1_117067454_+SINEAluAluSz
CAediting_90767chr1_117067470_+SINEAluAluSz
CAediting_90768chr1_117067474_+SINEAluAluSz
CAediting_90769chr1_117067475_+SINEAluAluSz
CAediting_90770chr1_117067496_+SINEAluAluSz
CAediting_90771chr1_117082233_+SINEAluAluJb
CAediting_90772chr1_117082235_+SINEAluAluJb
CAediting_90773chr1_117082282_+SINEAluAluJb
CAediting_90774chr1_117082292_+SINEAluAluJb
CAediting_90775chr1_117082297_+SINEAluAluJb
CAediting_90776chr1_117082298_+SINEAluAluJb
CAediting_90777chr1_117082312_+SINEAluAluJb
CAediting_90778chr1_117082313_+SINEAluAluJb
CAediting_90779chr1_117082317_+SINEAluAluJb
CAediting_90780chr1_117082330_+SINEAluAluJb
CAediting_90781chr1_117082339_+SINEAluAluJb
CAediting_90782chr1_117082342_+SINEAluAluJb
CAediting_90783chr1_117082352_+SINEAluAluJb
CAediting_90784chr1_117082354_+SINEAluAluJb
CAediting_90785chr1_117082355_+SINEAluAluJb
CAediting_90786chr1_117082378_+SINEAluAluJb
CAediting_90787chr1_117082379_+SINEAluAluJb
CAediting_90788chr1_117082386_+SINEAluAluJb
CAediting_90789chr1_117082397_+SINEAluAluJb
CAediting_90790chr1_117082411_+SINEAluAluJb
CAediting_90791chr1_117082414_+SINEAluAluJb
CAediting_90792chr1_117082433_+SINEAluAluJb
CAediting_90793chr1_117082434_+SINEAluAluJb
CAediting_90794chr1_117082435_+SINEAluAluJb
CAediting_90795chr1_117082447_+SINEAluAluJb
CAediting_90796chr1_117082448_+SINEAluAluJb
CAediting_90797chr1_117082451_+SINEAluAluJb
CAediting_90798chr1_117082452_+SINEAluAluJb
CAediting_90799chr1_117082465_+SINEAluAluJb
CAediting_90800chr1_117082489_+SINEAluAluJb
CAediting_90802chr1_117082715_+SINEAluFLAM_A
CAediting_90803chr1_117082737_+SINEAluFLAM_A
CAediting_90804chr1_117082755_+SINEAluFLAM_A
CAediting_90805chr1_117082761_+SINEAluFLAM_A
CAediting_90806chr1_117082766_+SINEAluFLAM_A
CAediting_90807chr1_117082770_+SINEAluFLAM_A
CAediting_90808chr1_117082775_+SINEAluFLAM_A
CAediting_90809chr1_117082795_+SINEAluFLAM_A
CAediting_90810chr1_117082807_+SINEAluFLAM_A
CAediting_90811chr1_117082810_+SINEAluFLAM_A
CAediting_90812chr1_117082811_+SINEAluFLAM_A
CAediting_90813chr1_117082987_+SINEAluAluY
CAediting_90814chr1_117082988_+SINEAluAluY
CAediting_90815chr1_117083063_+SINEAluAluY
CAediting_90816chr1_117083064_+SINEAluAluY
CAediting_90817chr1_117083065_+SINEAluAluY
CAediting_90818chr1_117083076_+SINEAluAluY
CAediting_90819chr1_117083079_+SINEAluAluY
CAediting_90820chr1_117083082_+SINEAluAluY
CAediting_90821chr1_117083090_+SINEAluAluY
CAediting_90822chr1_117083091_+SINEAluAluY
CAediting_90823chr1_117083092_+SINEAluAluY
CAediting_90824chr1_117083095_+SINEAluAluY
CAediting_90825chr1_117083099_+SINEAluAluY
CAediting_90826chr1_117083100_+SINEAluAluY
CAediting_90827chr1_117083121_+SINEAluAluY
CAediting_90828chr1_117083131_+SINEAluAluY
CAediting_90829chr1_117083148_+SINEAluAluY
CAediting_90830chr1_117083162_+SINEAluAluY
CAediting_90831chr1_117083224_+SINEAluAluY
CAediting_90832chr1_117083838_+SINEAluFLAM_C
CAediting_90833chr1_117083839_+SINEAluFLAM_C
CAediting_90834chr1_117083859_+SINEAluFLAM_C
CAediting_90835chr1_117083878_+SINEAluFLAM_C
CAediting_90836chr1_117083879_+SINEAluFLAM_C
CAediting_90837chr1_117083883_+SINEAluFLAM_C
CAediting_90838chr1_117083892_+SINEAluFLAM_C
CAediting_90839chr1_117083929_+SINEAluFLAM_C
CAediting_90840chr1_117083932_+SINEAluFLAM_C
CAediting_90841chr1_117085298_+SINEAluAluSz
CAediting_90842chr1_117085299_+SINEAluAluSz
CAediting_90843chr1_117085388_+SINEAluAluSz
CAediting_90844chr1_117085402_+SINEAluAluSz
CAediting_90845chr1_117085406_+SINEAluAluSz
CAediting_90846chr1_117085432_+SINEAluAluSz
CAediting_90847chr1_117085473_+SINEAluAluSz
CAediting_90848chr1_117087324_+SINEAluAluSx1
CAediting_90849chr1_117087392_+SINEAluAluSx1
CAediting_90850chr1_117087493_+SINEAluAluSx1
CAediting_90851chr1_117088355_+SINEAluAluY
CAediting_90852chr1_117088360_+SINEAluAluY
CAediting_90853chr1_117088371_+SINEAluAluY
CAediting_90854chr1_117088380_+SINEAluAluY
CAediting_90855chr1_117088382_+SINEAluAluY
CAediting_90856chr1_117088383_+SINEAluAluY
CAediting_90857chr1_117088390_+SINEAluAluY
CAediting_90858chr1_117088433_+SINEAluAluY
CAediting_90859chr1_117088439_+SINEAluAluY
CAediting_90860chr1_117088443_+SINEAluAluY
CAediting_90861chr1_117088446_+SINEAluAluY
CAediting_90862chr1_117088448_+SINEAluAluY
CAediting_90863chr1_117088449_+SINEAluAluY
CAediting_90864chr1_117088457_+SINEAluAluY
CAediting_90865chr1_117088458_+SINEAluAluY
CAediting_90866chr1_117088465_+SINEAluAluY
CAediting_90867chr1_117088482_+SINEAluAluY
CAediting_90868chr1_117088525_+SINEAluAluY
CAediting_90869chr1_117101887_+SINEAluAluJr
CAediting_90870chr1_117101893_+SINEAluAluJr
CAediting_90871chr1_117101903_+SINEAluAluJr
CAediting_90872chr1_117101913_+SINEAluAluJr
CAediting_90873chr1_117101935_+SINEAluAluJr
CAediting_90874chr1_117101940_+SINEAluAluJr
CAediting_90875chr1_117101941_+SINEAluAluJr
CAediting_90876chr1_117101958_+SINEAluAluJr
CAediting_90877chr1_117101960_+SINEAluAluJr
CAediting_90878chr1_117101966_+SINEAluAluJr
CAediting_90879chr1_117101980_+SINEAluAluJr
CAediting_90880chr1_117101999_+SINEAluAluJr
CAediting_90881chr1_117102008_+SINEAluAluJr
CAediting_90882chr1_117102013_+SINEAluAluJr
CAediting_90883chr1_117102044_+SINEAluAluJr
CAediting_90884chr1_117102048_+SINEAluAluJr
CAediting_90885chr1_117102067_+SINEAluAluJr
CAediting_90886chr1_117102102_+SINEAluAluJr
CAediting_90887chr1_117102112_+SINEAluAluJr
CAediting_90896chr1_117103862_+SINEAluAluSc
CAediting_90897chr1_117103865_+SINEAluAluSc
CAediting_90898chr1_117103873_+SINEAluAluSc
CAediting_90899chr1_117103874_+SINEAluAluSc
CAediting_90900chr1_117103894_+SINEAluAluSc
CAediting_90901chr1_117103903_+SINEAluAluSc
CAediting_90902chr1_117105497_+SINEAluAluSz6
CAediting_90903chr1_117105645_+SINEAluAluSz6
CAediting_90904chr1_117105656_+SINEAluAluSz6
CAediting_90905chr1_117105705_+SINEAluAluSz6

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RNA A-to-I editing events in the alternative splicing sites for TTF2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000116830.10.TTF2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000116830.10.TTF2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TTF2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TTF2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TTF2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_90882chr1_117102013_+ENSG00000116830.10ENST00000369466hsa-miR-9331171020091171020157mer-m8117101995117102016147.00-19.82
CAediting_90888chr1_117103376_+ENSG00000116830.10ENST00000369466hsa-miR-192-3p1171033721171033798mer-1a117103359117103379142.00-11.51
CAediting_90895chr1_117103407_+ENSG00000116830.10ENST00000369466hsa-miR-7844-5p1171034031171034097mer-m8117103390117103410154.00-15.59
CAediting_90907chr1_117105723_+ENSG00000116830.10ENST00000369466hsa-miR-4727-5p1171057211171057288mer-1a117105708117105728145.00-15.70
CAediting_90907chr1_117105723_+ENSG00000116830.10ENST00000369466hsa-miR-99021171057171171057237mer-m8117105703117105724140.00-14.64
CAediting_90907chr1_117105723_+ENSG00000116830.10ENST00000369466hsa-miR-99021171057171171057237mer-m8117105703117105724140.00-14.64
CAediting_90909chr1_117105733_+ENSG00000116830.10ENST00000369466hsa-miR-192-3p1171057291171057357mer-m8117105715117105736147.00-16.59
CAediting_90909chr1_117105733_+ENSG00000116830.10ENST00000369466hsa-miR-4727-5p1171057311171057377mer-m8117105718117105738153.00-16.27
CAediting_90910chr1_117105741_+ENSG00000116830.10ENST00000369466hsa-miR-3680-5p1171057371171057437mer-m8117105722117105744151.00-17.16
CAediting_90910chr1_117105741_+ENSG00000116830.10ENST00000369466hsa-miR-3680-5p1171057371171057437mer-m8117105722117105744151.00-17.16
CAediting_90910chr1_117105741_+ENSG00000116830.10ENST00000369466hsa-miR-6794-3p1171057351171057417mer-m8117105721117105742144.00-14.55
CAediting_90869chr1_117101887_+ENSG00000116830.10ENST00000369466hsa-miR-80521171018851171018906mer117101873117101891148.00-33.74
CAediting_90870chr1_117101893_+ENSG00000116830.10ENST00000369466hsa-miR-371a-3p1171018901171018967mer-m8117101875117101897144.00-15.05
CAediting_90870chr1_117101893_+ENSG00000116830.10ENST00000369466hsa-miR-373-3p1171018921171018976mer117101876117101898147.00-17.87
CAediting_90877chr1_117101960_+ENSG00000116830.10ENST00000369466hsa-miR-4716-5p1171019541171019607mer-m8117101940117101961148.00-14.09
CAediting_90880chr1_117101999_+ENSG00000116830.10ENST00000369466hsa-miR-42671171019931171019997mer-m8117101985117102000143.00-16.52
CAediting_90883chr1_117102044_+ENSG00000116830.10ENST00000369466hsa-miR-19131171020421171020487mer-m8117102028117102049147.00-22.10
CAediting_90883chr1_117102044_+ENSG00000116830.10ENST00000369466hsa-miR-6849-3p1171020371171020437mer-m8117102023117102044140.00-16.73
CAediting_90887chr1_117102112_+ENSG00000116830.10ENST00000369466hsa-miR-19721171021111171021166mer117102095117102117142.00-32.34
CAediting_90887chr1_117102112_+ENSG00000116830.10ENST00000369466hsa-miR-19721171021111171021166mer117102095117102117142.00-32.34
CAediting_90887chr1_117102112_+ENSG00000116830.10ENST00000369466hsa-miR-4743-5p1171021081171021147mer-m8117102096117102115152.00-27.83
CAediting_90891chr1_117103390_+ENSG00000116830.10ENST00000369466hsa-miR-4677-5p1171033871171033937mer-m8117103373117103394145.00-10.41
CAediting_90892chr1_117103391_+ENSG00000116830.10ENST00000369466hsa-miR-4711-3p1171033881171033947mer-m8117103379117103395146.00-12.06
CAediting_90892chr1_117103391_+ENSG00000116830.10ENST00000369466hsa-miR-511-5p1171033871171033937mer-m8117103374117103394142.00-12.73
CAediting_90893chr1_117103398_+ENSG00000116830.10ENST00000369466hsa-miR-22781171033961171034016mer117103382117103402142.00-17.49
CAediting_90893chr1_117103398_+ENSG00000116830.10ENST00000369466hsa-miR-6501-3p1171033961171034027mer-m8117103379117103403142.00-16.60
CAediting_90893chr1_117103398_+ENSG00000116830.10ENST00000369466hsa-miR-6513-3p1171033911171033977mer-m8117103378117103398140.00-8.83
CAediting_90894chr1_117103406_+ENSG00000116830.10ENST00000369466hsa-miR-34a-3p1171034021171034087mer-m8117103388117103409159.00-14.01
CAediting_90894chr1_117103406_+ENSG00000116830.10ENST00000369466hsa-miR-3617-3p1171034011171034077mer-m8117103386117103408157.00-8.26
CAediting_90894chr1_117103406_+ENSG00000116830.10ENST00000369466hsa-miR-42911171034001171034067mer-m8117103392117103407142.00-13.38
CAediting_90894chr1_117103406_+ENSG00000116830.10ENST00000369466hsa-miR-7611171034001171034067mer-1a117103385117103406140.00-17.92
CAediting_90898chr1_117103873_+ENSG00000116830.10ENST00000369466hsa-miR-99001171038711171038777mer-m8117103859117103878155.00-17.58
CAediting_90899chr1_117103874_+ENSG00000116830.10ENST00000369466hsa-miR-3155a1171038711171038777mer-m8117103857117103878141.00-23.88
CAediting_90899chr1_117103874_+ENSG00000116830.10ENST00000369466hsa-miR-3155b1171038711171038777mer-m8117103860117103878141.00-22.98
CAediting_90899chr1_117103874_+ENSG00000116830.10ENST00000369466hsa-miR-4841171038711171038777mer-m8117103857117103878151.00-23.09
CAediting_90903chr1_117105645_+ENSG00000116830.10ENST00000369466hsa-miR-331-3p1171056391171056457mer-m8117105626117105646141.00-17.53
CAediting_90903chr1_117105645_+ENSG00000116830.10ENST00000369466hsa-miR-43081171056381171056447mer-m8117105628117105645143.00-15.60
CAediting_90903chr1_117105645_+ENSG00000116830.10ENST00000369466hsa-miR-43131171056411171056477mer-m8117105629117105648156.00-21.95
CAediting_90904chr1_117105656_+ENSG00000116830.10ENST00000369466hsa-miR-4772-3p1171056521171056587mer-m8117105637117105659158.00-20.38
CAediting_90905chr1_117105705_+ENSG00000116830.10ENST00000369466hsa-miR-320a-5p1171056991171057068mer-1a117105681117105706150.00-22.96
CAediting_90905chr1_117105705_+ENSG00000116830.10ENST00000369466hsa-miR-6868-3p1171057001171057078mer-1a117105685117105707154.00-19.84
CAediting_90905chr1_117105705_+ENSG00000116830.10ENST00000369466hsa-miR-942-5p1171056981171057047mer-m8117105686117105705153.00-23.26
CAediting_90906chr1_117105708_+ENSG00000116830.10ENST00000369466hsa-miR-6812-3p1171057031171057097mer-m8117105690117105710155.00-25.38
CAediting_90912chr1_117105757_+ENSG00000116830.10ENST00000369466hsa-miR-4676-3p1171057521171057576mer117105734117105758147.00-21.13
CAediting_90915chr1_117106290_+ENSG00000116830.10ENST00000369466hsa-miR-45271171062861171062927mer-m8117106272117106293140.00-12.30
CAediting_90915chr1_117106290_+ENSG00000116830.10ENST00000369466hsa-miR-6503-5p1171062861171062927mer-m8117106271117106293147.00-12.87
CAediting_90915chr1_117106290_+ENSG00000116830.10ENST00000369466hsa-miR-7107-3p1171062871171062926mer117106269117106293152.00-11.37
CAediting_90916chr1_117106291_+ENSG00000116830.10ENST00000369466hsa-miR-3620-5p1171062891171062946mer117106280117106300147.00-26.69
CAediting_90917chr1_117106301_+ENSG00000116830.10ENST00000369466hsa-miR-43001171062991171063068mer-1a117106289117106306153.00-20.40
CAediting_90917chr1_117106301_+ENSG00000116830.10ENST00000369466hsa-miR-4633-3p1171062981171063047mer-m8117106284117106305154.00-18.92
CAediting_90917chr1_117106301_+ENSG00000116830.10ENST00000369466hsa-miR-5591-5p1171062991171063068mer-1a117106288117106306164.00-26.85
CAediting_90917chr1_117106301_+ENSG00000116830.10ENST00000369466hsa-miR-6500-5p1171062981171063047mer-m8117106282117106305140.00-12.92
CAediting_90917chr1_117106301_+ENSG00000116830.10ENST00000369466hsa-miR-6726-5p1171062991171063068mer-1a117106286117106306153.00-24.60
CAediting_90917chr1_117106301_+ENSG00000116830.10ENST00000369466hsa-miR-9201171062991171063068mer-1a117106287117106306143.00-18.49
CAediting_90919chr1_117106316_+ENSG00000116830.10ENST00000369466hsa-miR-51931171063131171063197mer-m8117106301117106320147.00-23.15
CAediting_90919chr1_117106316_+ENSG00000116830.10ENST00000369466hsa-miR-6749-3p1171063111171063177mer-m8117106299117106318158.00-29.64
CAediting_90875chr1_117101941_+ENSG00000116830.10ENST00000369466hsa-miR-12001171019371171019426mer117101918117101943142.00-18.61
CAediting_90875chr1_117101941_+ENSG00000116830.10ENST00000369466hsa-miR-121131171019341171019407mer-m8117101919117101941141.00-15.57
CAediting_90875chr1_117101941_+ENSG00000116830.10ENST00000369466hsa-miR-45391171019341171019407mer-m8117101916117101941153.00-20.42
CAediting_90878chr1_117101966_+ENSG00000116830.10ENST00000369466hsa-miR-1227-5p1171019641171019707mer-m8117101955117101971143.00-20.10
CAediting_90896chr1_117103862_+ENSG00000116830.10ENST00000369466hsa-miR-6752-3p1171038551171038617mer-m8117103843117103862157.00-27.58
CAediting_90896chr1_117103862_+ENSG00000116830.10ENST00000369466hsa-miR-6801-3p1171038561171038638mer-1a117103840117103863148.00-26.00
CAediting_90896chr1_117103862_+ENSG00000116830.10ENST00000369466hsa-miR-6810-3p1171038561171038638mer-1a117103844117103863157.00-31.49
CAediting_90897chr1_117103865_+ENSG00000116830.10ENST00000369466hsa-miR-44311171038611171038677mer-m8117103847117103868140.00-15.70
CAediting_90897chr1_117103865_+ENSG00000116830.10ENST00000369466hsa-miR-6845-3p1171038581171038647mer-m8117103844117103865158.00-24.81
CAediting_90900chr1_117103894_+ENSG00000116830.10ENST00000369466hsa-miR-6511b-3p1171038931171038986mer117103877117103899140.00-25.01
CAediting_90900chr1_117103894_+ENSG00000116830.10ENST00000369466hsa-miR-6511b-3p1171038931171038986mer117103877117103899140.00-25.01
CAediting_90900chr1_117103894_+ENSG00000116830.10ENST00000369466hsa-miR-6784-3p1171038931171038986mer117103877117103899143.00-26.64
CAediting_90901chr1_117103903_+ENSG00000116830.10ENST00000369466hsa-miR-42671171038961171039027mer-m8117103888117103903148.00-20.54
CAediting_90901chr1_117103903_+ENSG00000116830.10ENST00000369466hsa-miR-79771171038981171039047mer-m8117103887117103905150.00-21.06
CAediting_90918chr1_117106307_+ENSG00000116830.10ENST00000369466hsa-miR-1247-3p1171063021171063087mer-m8117106289117106309152.00-29.46
CAediting_90918chr1_117106307_+ENSG00000116830.10ENST00000369466hsa-miR-5587-3p1171063031171063108mer-1a117106291117106310146.00-21.42
CAediting_90918chr1_117106307_+ENSG00000116830.10ENST00000369466hsa-miR-6763-3p1171063041171063107mer-m8117106291117106311140.00-21.65

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_90869chr1_117101887_+ENSG00000116830.10ENST00000369466hsa-miR-10399-5p1171018811171018877mer-m8117101867117101888144-10.26
CAediting_90919chr1_117106316_+ENSG00000116830.10ENST00000369466hsa-miR-1236-3p1171063121171063187mer-m8117106296117106319148-23.25
CAediting_90902chr1_117105497_+ENSG00000116830.10ENST00000369466hsa-miR-1245a1171054921171054987mer-m8117105479117105499153-19.33
CAediting_90903chr1_117105645_+ENSG00000116830.10ENST00000369466hsa-miR-12811171056421171056487mer-m8117105633117105649145-17.85
CAediting_90871chr1_117101903_+ENSG00000116830.10ENST00000369466hsa-miR-150-5p1171018971171019037mer-m8117101883117101904140-15.81
CAediting_90878chr1_117101966_+ENSG00000116830.10ENST00000369466hsa-miR-193a-5p1171019621171019687mer-m8117101948117101969140-13.43
CAediting_90896chr1_117103862_+ENSG00000116830.10ENST00000369466hsa-miR-19761171038561171038638mer-1a117103842117103863153-23.32
CAediting_90872chr1_117101913_+ENSG00000116830.10ENST00000369466hsa-miR-19761171019101171019167mer-m8117101896117101917152-25.54
CAediting_90884chr1_117102048_+ENSG00000116830.10ENST00000369466hsa-miR-19761171020451171020517mer-m8117102032117102052149-26.06
CAediting_90878chr1_117101966_+ENSG00000116830.10ENST00000369466hsa-miR-200c-5p1171019601171019667mer-m8117101946117101967140-13.19
CAediting_90889chr1_117103379_+ENSG00000116830.10ENST00000369466hsa-miR-302f1171033751171033817mer-m8117103366117103382140-9.4
CAediting_90890chr1_117103380_+ENSG00000116830.10ENST00000369466hsa-miR-302f1171033751171033817mer-m8117103366117103382140-9.4
CAediting_90918chr1_117106307_+ENSG00000116830.10ENST00000369466hsa-miR-3192-5p1171063011171063077mer-m8117106288117106308145-20.91
CAediting_90887chr1_117102112_+ENSG00000116830.10ENST00000369466hsa-miR-36521171021081171021147mer-m8117102098117102115142-18.29
CAediting_90894chr1_117103406_+ENSG00000116830.10ENST00000369466hsa-miR-374b-3p1171034001171034067mer-m8117103384117103407149-9.66
CAediting_90895chr1_117103407_+ENSG00000116830.10ENST00000369466hsa-miR-374b-3p1171034001171034067mer-m8117103384117103407149-9.66
CAediting_90879chr1_117101980_+ENSG00000116830.10ENST00000369466hsa-miR-376a-3p1171019731171019808mer-1a117101960117101980146-12.16
CAediting_90879chr1_117101980_+ENSG00000116830.10ENST00000369466hsa-miR-376a-3p1171019731171019808mer-1a117101960117101980146-12.16
CAediting_90879chr1_117101980_+ENSG00000116830.10ENST00000369466hsa-miR-376b-3p1171019731171019808mer-1a117101959117101980146-12.16
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378a-3p1171020611171020677mer-m8117102045117102068146-17.2
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378b1171020611171020677mer-m8117102050117102068150-17.2
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378c1171020611171020677mer-m8117102042117102068146-16.55
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378d1171020611171020677mer-m8117102047117102068146-16.55
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378d1171020611171020677mer-m8117102047117102068146-16.55
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378e1171020611171020677mer-m8117102048117102068146-16.55
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378f1171020611171020677mer-m8117102046117102068146-18.13
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378h1171020611171020677mer-m8117102046117102068146-16.55
CAediting_90885chr1_117102067_+ENSG00000116830.10ENST00000369466hsa-miR-378i1171020611171020677mer-m8117102046117102068150-17.77
CAediting_90918chr1_117106307_+ENSG00000116830.10ENST00000369466hsa-miR-42921171063031171063108mer-1a117106293117106310140-18.14
CAediting_90887chr1_117102112_+ENSG00000116830.10ENST00000369466hsa-miR-44301171021081171021147mer-m8117102097117102115147-21.62
CAediting_90879chr1_117101980_+ENSG00000116830.10ENST00000369466hsa-miR-4659a-3p1171019781171019836mer117101963117101984145-15.75
CAediting_90879chr1_117101980_+ENSG00000116830.10ENST00000369466hsa-miR-4659b-3p1171019781171019836mer117101963117101984145-16.16
CAediting_90908chr1_117105730_+ENSG00000116830.10ENST00000369466hsa-miR-4735-5p1171057271171057337mer-m8117105713117105734140-4.29
CAediting_90909chr1_117105733_+ENSG00000116830.10ENST00000369466hsa-miR-4735-5p1171057271171057337mer-m8117105713117105734140-4.29
CAediting_90900chr1_117103894_+ENSG00000116830.10ENST00000369466hsa-miR-4772-3p1171038881171038947mer-m8117103873117103895154-22.4
CAediting_90898chr1_117103873_+ENSG00000116830.10ENST00000369466hsa-miR-498-5p1171038671171038737mer-m8117103852117103874142-9.71
CAediting_90899chr1_117103874_+ENSG00000116830.10ENST00000369466hsa-miR-498-5p1171038671171038737mer-m8117103852117103874142-9.71
CAediting_90881chr1_117102008_+ENSG00000116830.10ENST00000369466hsa-miR-4999-3p1171020041171020107mer-m8117101991117102011141-12.4
CAediting_90878chr1_117101966_+ENSG00000116830.10ENST00000369466hsa-miR-550a-3p1171019601171019667mer-m8117101942117101967149-21.44
CAediting_90878chr1_117101966_+ENSG00000116830.10ENST00000369466hsa-miR-550a-3p1171019601171019667mer-m8117101942117101967149-21.44
CAediting_90878chr1_117101966_+ENSG00000116830.10ENST00000369466hsa-miR-550a-3p1171019601171019667mer-m8117101942117101967149-21.44
CAediting_90910chr1_117105741_+ENSG00000116830.10ENST00000369466hsa-miR-550b-3p1171057361171057427mer-m8117105724117105743140-11.79
CAediting_90911chr1_117105742_+ENSG00000116830.10ENST00000369466hsa-miR-550b-3p1171057361171057427mer-m8117105724117105743140-11.79
CAediting_90910chr1_117105741_+ENSG00000116830.10ENST00000369466hsa-miR-550b-3p1171057361171057427mer-m8117105724117105743140-11.79
CAediting_90911chr1_117105742_+ENSG00000116830.10ENST00000369466hsa-miR-550b-3p1171057361171057427mer-m8117105724117105743140-11.79
CAediting_90886chr1_117102102_+ENSG00000116830.10ENST00000369466hsa-miR-56931171020981171021047mer-m8117102084117102105142-16.19
CAediting_90873chr1_117101935_+ENSG00000116830.10ENST00000369466hsa-miR-6061171019311171019377mer-m8117101919117101938147-12.47
CAediting_90907chr1_117105723_+ENSG00000116830.10ENST00000369466hsa-miR-6508-5p1171057171171057237mer-m8117105705117105724155-12.27
CAediting_90872chr1_117101913_+ENSG00000116830.10ENST00000369466hsa-miR-660-3p1171019111171019188mer-1a117101898117101918143-18.16
CAediting_90872chr1_117101913_+ENSG00000116830.10ENST00000369466hsa-miR-6747-3p1171019081171019158mer-1a117101894117101915154-24.54
CAediting_90884chr1_117102048_+ENSG00000116830.10ENST00000369466hsa-miR-6747-3p1171020431171020508mer-1a117102029117102050150-24.11
CAediting_90871chr1_117101903_+ENSG00000116830.10ENST00000369466hsa-miR-6778-3p1171018991171019057mer-m8117101886117101906144-13.97
CAediting_90918chr1_117106307_+ENSG00000116830.10ENST00000369466hsa-miR-6779-5p1171063011171063066mer117106285117106307150-38.66
CAediting_90903chr1_117105645_+ENSG00000116830.10ENST00000369466hsa-miR-6791-3p1171056411171056477mer-m8117105629117105648152-22.57
CAediting_90903chr1_117105645_+ENSG00000116830.10ENST00000369466hsa-miR-6829-3p1171056411171056477mer-m8117105629117105648140-18.69
CAediting_90915chr1_117106290_+ENSG00000116830.10ENST00000369466hsa-miR-6839-3p1171062881171062947mer-m8117106274117106295154-12.01
CAediting_90916chr1_117106291_+ENSG00000116830.10ENST00000369466hsa-miR-6839-3p1171062881171062947mer-m8117106274117106295154-12.01
CAediting_90871chr1_117101903_+ENSG00000116830.10ENST00000369466hsa-miR-6878-3p1171019011171019088mer-1a117101888117101908142-13.63
CAediting_90914chr1_117106286_+ENSG00000116830.10ENST00000369466hsa-miR-6885-3p1171062841171062907mer-m8117106271117106291140-5.04
CAediting_90915chr1_117106290_+ENSG00000116830.10ENST00000369466hsa-miR-6885-3p1171062841171062907mer-m8117106271117106291140-5.04
CAediting_90916chr1_117106291_+ENSG00000116830.10ENST00000369466hsa-miR-6885-3p1171062841171062907mer-m8117106271117106291140-5.04
CAediting_90918chr1_117106307_+ENSG00000116830.10ENST00000369466hsa-miR-7113-3p1171063051171063117mer-m8117106290117106312140-19.86
CAediting_90873chr1_117101935_+ENSG00000116830.10ENST00000369466hsa-miR-7158-3p1171019331171019408mer-1a117101918117101940146-12.85
CAediting_90874chr1_117101940_+ENSG00000116830.10ENST00000369466hsa-miR-7158-3p1171019331171019408mer-1a117101918117101940146-12.85
CAediting_90876chr1_117101958_+ENSG00000116830.10ENST00000369466hsa-miR-744-3p1171019511171019577mer-m8117101937117101958140-9.95
CAediting_90907chr1_117105723_+ENSG00000116830.10ENST00000369466hsa-miR-80671171057171171057237mer-m8117105703117105724146-8.88
CAediting_90902chr1_117105497_+ENSG00000116830.10ENST00000369466hsa-miR-80791171054921171054987mer-m8117105481117105499155-17.84
CAediting_90887chr1_117102112_+ENSG00000116830.10ENST00000369466hsa-miR-875-3p1171021061171021127mer-m8117102094117102113151-12.87
CAediting_90886chr1_117102102_+ENSG00000116830.10ENST00000369466hsa-miR-891a-3p1171020961171021027mer-m8117102077117102103146-23.84

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000116830.10ENST00000369466hsa-miR-624-3p1171021311171021377mer-m8117102116117102138158-18.91
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171054661171054727mer-m8117105452117105473140-10.3
CAediting_688080chr9_63819626_+ENSG00000116830.10ENST00000369466hsa-miR-4477b1171016511171016588mer-1a117101638117101658143-12.25
CAediting_1229415chr17_67471547_+ENSG00000116830.10ENST00000369466hsa-miR-548aa1171044401171044467mer-m8117104424117104447155-16.7
CAediting_1229415chr17_67471547_+ENSG00000116830.10ENST00000369466hsa-miR-548aa1171059071171059137mer-m8117105892117105914147-11.63
CAediting_1160181chr17_7017644_-ENSG00000116830.10ENST00000369466hsa-miR-195-3p1171040881171040947mer-m8117104071117104095155-13.93
CAediting_1160181chr17_7017644_-ENSG00000116830.10ENST00000369466hsa-miR-195-3p1171043761171043827mer-m8117104363117104383146-10.67
CAediting_117844chr1_162342605_+ENSG00000116830.10ENST00000369466hsa-miR-556-3p1171021171171021237mer-m8117102104117102124141-10.42
CAediting_228905chr2_188297554_+ENSG00000116830.10ENST00000369466hsa-miR-561-3p1171016061171016116mer117101591117101612146-16.57
CAediting_442554chr5_154685830_+ENSG00000116830.10ENST00000369466hsa-miR-13031171043871171043937mer-m8117104373117104394148-16.19
CAediting_442554chr5_154685830_+ENSG00000116830.10ENST00000369466hsa-miR-13031171052491171052568mer-1a117105235117105256157-20.76
CAediting_414656chr5_72878640_+ENSG00000116830.10ENST00000369466hsa-miR-4804-3p1171016351171016417mer-m8117101622117101642147-10.4
CAediting_580943chr7_100356700_+ENSG00000116830.10ENST00000369466hsa-miR-6840-3p1171029061171029127mer-m8117102892117102913140-26.07
CAediting_524911chr7_5495852_-ENSG00000116830.10ENST00000369466hsa-miR-589-3p1171058791171058868mer-1a117105862117105886146-19.7
CAediting_468389chr6_31355314_-ENSG00000116830.10ENST00000369466hsa-miR-6891-5p1171030551171030628mer-1a117103043117103062148-24.64
CAediting_468389chr6_31355314_-ENSG00000116830.10ENST00000369466hsa-miR-6891-5p1171032161171032227mer-m8117103205117103223154-24.89
CAediting_468389chr6_31355314_-ENSG00000116830.10ENST00000369466hsa-miR-6891-5p1171055411171055477mer-m8117105530117105548140-14.89

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_573001chr7_92204086_-ENSG00000116830.10ENST00000369466hsa-miR-1285-5p1171046261171046327mer-m8117104613117104633140-10.85
CAediting_573000chr7_92204081_-ENSG00000116830.10ENST00000369466hsa-miR-1285-5p1171046261171046327mer-m8117104613117104633140-10.85
CAediting_442554chr5_154685830_+ENSG00000116830.10ENST00000369466hsa-miR-13031171022211171022277mer-m8117102205117102228150-12.63
CAediting_846604chr11_93733708_-ENSG00000116830.10ENST00000369466hsa-miR-1304-3p1171021241171021318mer-1a117102108117102131155-20.88
CAediting_1160181chr17_7017644_-ENSG00000116830.10ENST00000369466hsa-miR-195-3p1171073121171073187mer-m8117107298117107319148-8.9
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171025721171025776mer117102555117102578142-13.8
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171026011171026066mer117102584117102607143-13.12
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171026331171026386mer117102619117102639142-11.93
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171026571171026637mer-m8117102640117102664155-13.25
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171026921171026976mer117102675117102698147-16.09
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171028221171028276mer117102808117102828142-12.32
CAediting_393chr1_1167164_+ENSG00000116830.10ENST00000369466hsa-miR-200b-3p1171024651171024706mer117102448117102471142-14.5
CAediting_1054808chr15_66496985_-ENSG00000116830.10ENST00000369466hsa-miR-45121171030991171031068mer-1a117103087117103106144-19.11
CAediting_1229413chr17_67471544_+ENSG00000116830.10ENST00000369466hsa-miR-548aa1171048051171048117mer-m8117104789117104812151-11.4
CAediting_1229414chr17_67471546_+ENSG00000116830.10ENST00000369466hsa-miR-548aa1171048051171048117mer-m8117104789117104812151-11.4
CAediting_1229415chr17_67471547_+ENSG00000116830.10ENST00000369466hsa-miR-548aa1171048051171048117mer-m8117104789117104812151-11.4
CAediting_228905chr2_188297554_+ENSG00000116830.10ENST00000369466hsa-miR-561-3p1171072771171072848mer-1a117107263117107284140-3.33
CAediting_980496chr14_31014685_-ENSG00000116830.10ENST00000369466hsa-miR-624-3p1171054111171054177mer-m8117105398117105418147-10.48
CAediting_1351755chr19_40282625_-ENSG00000116830.10ENST00000369466hsa-miR-6411171045991171046057mer-m8117104585117104606150-13.59
CAediting_1351755chr19_40282625_-ENSG00000116830.10ENST00000369466hsa-miR-6411171061861171061927mer-m8117106168117106193153-16.57
CAediting_1351755chr19_40282625_-ENSG00000116830.10ENST00000369466hsa-miR-6411171073501171073567mer-m8117107332117107357144-12.52

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TTF2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000369466.7protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_90869ENST00000369466.7chr1_117101887_+-2904.90-2904.90-2942.60
CAediting_90870ENST00000369466.7chr1_117101893_+-2904.10-2904.90-2942.60
CAediting_90871ENST00000369466.7chr1_117101903_+-2903.80-2904.90-2942.60
CAediting_90872ENST00000369466.7chr1_117101913_+-2906.70-2904.90-2942.60
CAediting_90873ENST00000369466.7chr1_117101935_+-2906.80-2904.90-2942.60
CAediting_90874ENST00000369466.7chr1_117101940_+-2904.60-2904.90-2942.60
CAediting_90875ENST00000369466.7chr1_117101941_+-2906.00-2904.90-2942.60
CAediting_90876ENST00000369466.7chr1_117101958_+-2904.50-2904.90-2942.60
CAediting_90877ENST00000369466.7chr1_117101960_+-2906.00-2904.90-2942.60
CAediting_90878ENST00000369466.7chr1_117101966_+-2906.00-2904.90-2942.60
CAediting_90879ENST00000369466.7chr1_117101980_+-2905.40-2904.90-2942.60
CAediting_90880ENST00000369466.7chr1_117101999_+-2905.70-2904.90-2942.60
CAediting_90881ENST00000369466.7chr1_117102008_+-2907.10-2904.90-2942.60
CAediting_90882ENST00000369466.7chr1_117102013_+-2904.50-2904.90-2942.60
CAediting_90883ENST00000369466.7chr1_117102044_+-2906.10-2904.90-2942.60
CAediting_90884ENST00000369466.7chr1_117102048_+-2905.30-2904.90-2942.60
CAediting_90885ENST00000369466.7chr1_117102067_+-2904.20-2904.90-2942.60
CAediting_90886ENST00000369466.7chr1_117102102_+-2904.50-2904.90-2942.60
CAediting_90887ENST00000369466.7chr1_117102112_+-2906.10-2904.90-2942.60
CAediting_90888ENST00000369466.7chr1_117103376_+-2904.60-2904.90-2942.60
CAediting_90889ENST00000369466.7chr1_117103379_+-2904.60-2904.90-2942.60
CAediting_90890ENST00000369466.7chr1_117103380_+-2905.20-2904.90-2942.60
CAediting_90891ENST00000369466.7chr1_117103390_+-2905.00-2904.90-2942.60
CAediting_90892ENST00000369466.7chr1_117103391_+-2905.00-2904.90-2942.60
CAediting_90893ENST00000369466.7chr1_117103398_+-2906.50-2904.90-2942.60
CAediting_90894ENST00000369466.7chr1_117103406_+-2905.00-2904.90-2942.60
CAediting_90895ENST00000369466.7chr1_117103407_+-2904.90-2904.90-2942.60
CAediting_90896ENST00000369466.7chr1_117103862_+-2904.50-2904.90-2942.60
CAediting_90897ENST00000369466.7chr1_117103865_+-2904.90-2904.90-2942.60
CAediting_90898ENST00000369466.7chr1_117103873_+-2904.40-2904.90-2942.60
CAediting_90899ENST00000369466.7chr1_117103874_+-2904.90-2904.90-2942.60
CAediting_90900ENST00000369466.7chr1_117103894_+-2904.10-2904.90-2942.60
CAediting_90901ENST00000369466.7chr1_117103903_+-2904.90-2904.90-2942.60
CAediting_90902ENST00000369466.7chr1_117105497_+-2905.10-2904.90-2942.60
CAediting_90903ENST00000369466.7chr1_117105645_+-2904.00-2904.90-2942.60
CAediting_90904ENST00000369466.7chr1_117105656_+-2908.90-2904.90-2942.60
CAediting_90905ENST00000369466.7chr1_117105705_+-2904.90-2904.90-2942.60
CAediting_90906ENST00000369466.7chr1_117105708_+-2904.90-2904.90-2942.60
CAediting_90907ENST00000369466.7chr1_117105723_+-2904.60-2904.90-2942.60
CAediting_90908ENST00000369466.7chr1_117105730_+-2904.90-2904.90-2942.60
CAediting_90909ENST00000369466.7chr1_117105733_+-2904.60-2904.90-2942.60
CAediting_90910ENST00000369466.7chr1_117105741_+-2905.00-2904.90-2942.60
CAediting_90911ENST00000369466.7chr1_117105742_+-2904.60-2904.90-2942.60
CAediting_90912ENST00000369466.7chr1_117105757_+-2904.90-2904.90-2942.60
CAediting_90913ENST00000369466.7chr1_117106279_+-2904.90-2904.90-2942.60
CAediting_90914ENST00000369466.7chr1_117106286_+-2908.90-2904.90-2942.60
CAediting_90915ENST00000369466.7chr1_117106290_+-2906.10-2904.90-2942.60
CAediting_90916ENST00000369466.7chr1_117106291_+-2906.40-2904.90-2942.60
CAediting_90917ENST00000369466.7chr1_117106301_+-2907.20-2904.90-2942.60
CAediting_90918ENST00000369466.7chr1_117106307_+-2907.70-2904.90-2942.60
CAediting_90919ENST00000369466.7chr1_117106316_+-2909.30-2904.90-2942.60

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Relation with ADAR for TTF2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_90857chr1_117088390_+..0.003104715471529970.208631146201149..
UCECCAediting_90857chr1_117088390_+0.03454009867013130.271149695102186....
STADCAediting_90858chr1_117088433_+..0.04426851193565880.236167338431588..
STADCAediting_90859chr1_117088439_+..3.5084524234349e-070.545330918792683..
ESCACAediting_90860chr1_117088443_+....0.03892733136401470.192017717795033
STADCAediting_90863chr1_117088449_+..3.84988140866597e-050.334819002865588..
STADCAediting_90864chr1_117088457_+..0.002175402337124690.301614871182477..
STADCAediting_90865chr1_117088458_+..0.0003461766663419630.323907437070387..

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Relation with cancer stages for TTF2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_90858chr1_117088433_+0.044750141853302-0.255836089871554
ESCAclinical_stageCAediting_90857chr1_117088390_+0.03105816547043990.337255879955915
ESCAclinical_stageCAediting_90864chr1_117088457_+0.02165626317728510.55178481509083
OVclinical_stageCAediting_90856chr1_117088383_+0.0207254388080769-0.295606403504426
OVclinical_stageCAediting_90859chr1_117088439_+0.03849793929944330.257344139742316
SKCMpathologic_stageCAediting_90863chr1_117088449_+0.03451488685826770.288286522667078
THCApathologic_stageCAediting_90863chr1_117088449_+0.02008656258802640.318553534718409

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Relation with survival for TTF2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TTF2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TTF2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource