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Editing gene: CUL4A (CAeditome ID:8451)

Gene summary for CUL4A

Gene summary

Gene information	Gene symbol	CUL4A
	Gene ID	8451
	Gene name	cullin 4A
	Synonyms	-
	Cytomap	13q34
	Type of gene	protein-coding
	Description	cullin-4ACUL-4A
	Modification date	20210524
	UniProtAcc	Q13619
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CUL4A	GO:0016567	Cullin-4A	26431207
CUL4A	GO:0031464	Cullin-4A	12732143
CUL4A	GO:0031464	Cullin-4A	14739464
CUL4A	GO:0031464	Cullin-4A	17085480
CUL4A	GO:0031464	Cullin-4A	18794347
CUL4A	GO:0031464	Cullin-4A	20129063
CUL4A	GO:0031464	Cullin-4A	20223979
CUL4A	GO:0080008	Cullin-4A	16949367
CUL4A	GO:0080008	Cullin-4A	18381890

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RNA A-to-I events for CUL4A

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000139842.13

RNA A-to-I editing events in Cancer.

CAediting_973707(113208915, +), CAediting_973708(113212511, +), CAediting_973709(113212519, +), CAediting_973710(113212528, +), CAediting_973711(113212533, +), CAediting_973712(113212550, +), CAediting_973713(113212558, +), CAediting_973714(113212638, +), CAediting_973715(113213126, +), CAediting_973716(113213197, +), CAediting_973717(113214538, +), CAediting_973718(113214587, +), CAediting_973719(113214588, +), CAediting_973720(113214591, +), CAediting_973721(113214615, +), CAediting_973722(113217981, +), CAediting_973723(113221640, +), CAediting_973724(113221719, +), CAediting_973725(113222651, +), CAediting_973726(113222657, +), CAediting_973727(113222701, +), CAediting_973728(113222725, +), CAediting_973729(113222802, +), CAediting_973730(113222841, +), CAediting_973731(113222845, +), CAediting_973732(113222852, +), CAediting_973733(113223432, +), CAediting_973734(113223439, +), CAediting_973735(113223459, +), CAediting_973736(113223497, +), CAediting_973737(113223498, +), CAediting_973738(113223515, +), CAediting_973739(113223524, +), CAediting_973740(113223527, +), CAediting_973741(113223537, +), CAediting_973742(113223539, +), CAediting_973743(113223563, +), CAediting_973744(113223564, +), CAediting_973745(113223571, +), CAediting_973746(113223577, +), CAediting_973747(113223580, +), CAediting_973748(113223658, +), CAediting_973749(113223659, +), CAediting_973750(113223671, +), CAediting_973751(113223687, +), CAediting_973752(113224098, +), CAediting_973753(113224232, +), CAediting_973754(113224255, +), CAediting_973755(113224298, +), CAediting_973756(113226761, +), CAediting_973757(113226805, +), CAediting_973758(113227642, +), CAediting_973759(113227678, +), CAediting_973760(113227694, +), CAediting_973761(113227799, +), CAediting_973762(113227857, +), CAediting_973763(113227858, +), CAediting_973764(113229030, +), CAediting_973765(113229049, +), CAediting_973766(113230794, +), CAediting_973767(113230810, +), CAediting_973768(113230826, +), CAediting_973769(113230871, +), CAediting_973770(113230916, +), CAediting_973771(113230920, +), CAediting_973772(113230926, +), CAediting_973773(113230962, +), CAediting_973774(113231047, +), CAediting_973775(113235715, +), CAediting_973776(113235783, +), CAediting_973777(113235791, +), CAediting_973778(113235824, +), CAediting_973779(113235891, +), CAediting_973780(113235991, +), CAediting_973781(113241653, +), CAediting_973782(113241655, +), CAediting_973783(113241724, +), CAediting_973784(113242225, +), CAediting_973785(113242580, +), CAediting_973786(113242631, +), CAediting_973787(113242665, +), CAediting_973788(113242706, +), CAediting_973789(113242731, +), CAediting_973790(113242732, +), CAediting_973791(113246926, +), CAediting_973792(113246927, +), CAediting_973793(113246928, +), CAediting_973794(113246932, +), CAediting_973795(113246934, +), CAediting_973796(113246960, +), CAediting_973797(113246961, +), CAediting_973798(113246962, +), CAediting_973799(113247039, +), CAediting_973800(113247043, +), CAediting_973801(113247111, +), CAediting_973802(113247208, +), CAediting_973803(113247218, +), CAediting_973804(113247244, +), CAediting_973805(113247263, +), CAediting_973806(113251520, +), CAediting_973807(113251552, +), CAediting_973808(113251599, +), CAediting_973809(113251632, +), CAediting_973810(113251707, +), CAediting_973811(113251726, +), CAediting_973812(113251754, +), CAediting_973813(113251786, +), CAediting_973814(113251801, +), CAediting_973815(113251804, +), CAediting_973816(113252413, +), CAediting_973817(113257145, +), CAediting_973818(113258107, +), CAediting_973819(113258112, +), CAediting_973820(113258120, +), CAediting_973821(113258151, +), CAediting_973822(113259913, +), CAediting_973823(113259942, +), CAediting_973824(113259950, +), CAediting_973825(113259951, +), CAediting_973826(113260028, +), CAediting_973827(113260039, +), CAediting_973828(113260042, +), CAediting_973829(113260043, +), CAediting_973830(113260048, +), CAediting_973831(113260089, +), CAediting_973832(113260098, +), CAediting_973833(113260108, +), CAediting_973834(113260110, +), CAediting_973835(113260116, +), CAediting_973836(113260124, +), CAediting_973837(113260125, +), CAediting_973838(113260301, +), CAediting_973839(113260365, +), CAediting_973840(113260369, +), CAediting_973841(113260411, +), CAediting_973842(113260414, +), CAediting_973843(113260416, +), CAediting_973844(113260419, +), CAediting_973845(113260439, +), CAediting_973846(113260457, +), CAediting_973847(113260462, +), CAediting_973848(113260484, +), CAediting_973849(113260525, +), CAediting_973850(113261842, +), CAediting_973851(113261880, +), CAediting_973852(113261881, +), CAediting_973853(113262552, +), CAediting_973854(113262606, +), CAediting_973855(113265279, +), CAediting_973856(113265295, +), CAediting_973857(113265346, +), CAediting_973858(113265357, +), CAediting_973859(113265365, +), CAediting_973860(113265491, +), CAediting_973861(113265649, +), CAediting_973862(113265661, +), CAediting_973863(113265677, +), CAediting_973864(113266040, +), CAediting_973865(113266048, +), CAediting_973866(113266055, +), CAediting_973867(113266228, +), CAediting_973868(113266254, +), CAediting_973869(113266259, +), CAediting_973870(113266266, +), CAediting_973871(113266271, +), CAediting_973872(113266281, +), CAediting_973873(113266282, +), CAediting_973874(113266299, +),

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RNA editing positional annotations for CUL4A using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_973707	chr13_113208915_+	intronic
CAediting_973708	chr13_113212511_+	ncRNA_intronic
CAediting_973709	chr13_113212519_+	ncRNA_intronic
CAediting_973710	chr13_113212528_+	ncRNA_intronic
CAediting_973711	chr13_113212533_+	ncRNA_intronic
CAediting_973712	chr13_113212550_+	ncRNA_intronic
CAediting_973713	chr13_113212558_+	ncRNA_intronic
CAediting_973714	chr13_113212638_+	ncRNA_intronic
CAediting_973715	chr13_113213126_+	ncRNA_intronic
CAediting_973716	chr13_113213197_+	ncRNA_intronic
CAediting_973717	chr13_113214538_+	ncRNA_intronic
CAediting_973718	chr13_113214587_+	ncRNA_intronic
CAediting_973719	chr13_113214588_+	ncRNA_intronic
CAediting_973720	chr13_113214591_+	ncRNA_intronic
CAediting_973721	chr13_113214615_+	ncRNA_intronic
CAediting_973722	chr13_113217981_+	ncRNA_intronic
CAediting_973723	chr13_113221640_+	ncRNA_intronic
CAediting_973724	chr13_113221719_+	ncRNA_intronic
CAediting_973725	chr13_113222651_+	ncRNA_intronic
CAediting_973726	chr13_113222657_+	ncRNA_intronic
CAediting_973727	chr13_113222701_+	ncRNA_intronic
CAediting_973728	chr13_113222725_+	ncRNA_intronic
CAediting_973729	chr13_113222802_+	ncRNA_intronic
CAediting_973730	chr13_113222841_+	ncRNA_intronic
CAediting_973731	chr13_113222845_+	ncRNA_intronic
CAediting_973732	chr13_113222852_+	ncRNA_intronic
CAediting_973733	chr13_113223432_+	ncRNA_intronic
CAediting_973734	chr13_113223439_+	ncRNA_intronic
CAediting_973735	chr13_113223459_+	ncRNA_intronic
CAediting_973736	chr13_113223497_+	ncRNA_intronic
CAediting_973737	chr13_113223498_+	ncRNA_intronic
CAediting_973738	chr13_113223515_+	ncRNA_intronic
CAediting_973739	chr13_113223524_+	ncRNA_intronic
CAediting_973740	chr13_113223527_+	ncRNA_intronic
CAediting_973741	chr13_113223537_+	ncRNA_intronic
CAediting_973742	chr13_113223539_+	ncRNA_intronic
CAediting_973743	chr13_113223563_+	ncRNA_intronic
CAediting_973744	chr13_113223564_+	ncRNA_intronic
CAediting_973745	chr13_113223571_+	ncRNA_intronic
CAediting_973746	chr13_113223577_+	ncRNA_intronic
CAediting_973747	chr13_113223580_+	ncRNA_intronic
CAediting_973748	chr13_113223658_+	ncRNA_intronic
CAediting_973749	chr13_113223659_+	ncRNA_intronic
CAediting_973750	chr13_113223671_+	ncRNA_intronic
CAediting_973751	chr13_113223687_+	ncRNA_intronic
CAediting_973752	chr13_113224098_+	ncRNA_intronic
CAediting_973753	chr13_113224232_+	ncRNA_intronic
CAediting_973754	chr13_113224255_+	ncRNA_intronic
CAediting_973755	chr13_113224298_+	ncRNA_intronic
CAediting_973756	chr13_113226761_+	ncRNA_intronic
CAediting_973757	chr13_113226805_+	ncRNA_intronic
CAediting_973758	chr13_113227642_+	ncRNA_intronic
CAediting_973759	chr13_113227678_+	ncRNA_intronic
CAediting_973760	chr13_113227694_+	ncRNA_intronic
CAediting_973761	chr13_113227799_+	ncRNA_intronic
CAediting_973762	chr13_113227857_+	ncRNA_intronic
CAediting_973763	chr13_113227858_+	ncRNA_intronic
CAediting_973764	chr13_113229030_+	ncRNA_intronic
CAediting_973765	chr13_113229049_+	ncRNA_intronic
CAediting_973766	chr13_113230794_+	ncRNA_intronic
CAediting_973767	chr13_113230810_+	ncRNA_intronic
CAediting_973768	chr13_113230826_+	ncRNA_intronic
CAediting_973769	chr13_113230871_+	ncRNA_intronic
CAediting_973770	chr13_113230916_+	ncRNA_intronic
CAediting_973771	chr13_113230920_+	ncRNA_intronic
CAediting_973772	chr13_113230926_+	ncRNA_intronic
CAediting_973773	chr13_113230962_+	ncRNA_intronic
CAediting_973774	chr13_113231047_+	ncRNA_intronic
CAediting_973775	chr13_113235715_+	intronic
CAediting_973776	chr13_113235783_+	intronic
CAediting_973777	chr13_113235791_+	intronic
CAediting_973778	chr13_113235824_+	intronic
CAediting_973779	chr13_113235891_+	intronic
CAediting_973780	chr13_113235991_+	intronic
CAediting_973781	chr13_113241653_+	intronic
CAediting_973782	chr13_113241655_+	intronic
CAediting_973783	chr13_113241724_+	intronic
CAediting_973784	chr13_113242225_+	intronic
CAediting_973785	chr13_113242580_+	intronic
CAediting_973786	chr13_113242631_+	intronic
CAediting_973787	chr13_113242665_+	intronic
CAediting_973788	chr13_113242706_+	intronic
CAediting_973789	chr13_113242731_+	intronic
CAediting_973790	chr13_113242732_+	intronic
CAediting_973791	chr13_113246926_+	ncRNA_intronic
CAediting_973792	chr13_113246927_+	ncRNA_intronic
CAediting_973793	chr13_113246928_+	ncRNA_intronic
CAediting_973794	chr13_113246932_+	ncRNA_intronic
CAediting_973795	chr13_113246934_+	ncRNA_intronic
CAediting_973796	chr13_113246960_+	ncRNA_intronic
CAediting_973797	chr13_113246961_+	ncRNA_intronic
CAediting_973798	chr13_113246962_+	ncRNA_intronic
CAediting_973799	chr13_113247039_+	ncRNA_intronic
CAediting_973800	chr13_113247043_+	ncRNA_intronic
CAediting_973801	chr13_113247111_+	ncRNA_intronic
CAediting_973802	chr13_113247208_+	ncRNA_intronic
CAediting_973803	chr13_113247218_+	ncRNA_intronic
CAediting_973804	chr13_113247244_+	ncRNA_intronic
CAediting_973805	chr13_113247263_+	ncRNA_intronic
CAediting_973806	chr13_113251520_+	ncRNA_intronic
CAediting_973807	chr13_113251552_+	ncRNA_intronic
CAediting_973808	chr13_113251599_+	ncRNA_intronic
CAediting_973809	chr13_113251632_+	ncRNA_intronic
CAediting_973810	chr13_113251707_+	ncRNA_intronic
CAediting_973811	chr13_113251726_+	ncRNA_intronic
CAediting_973812	chr13_113251754_+	ncRNA_intronic
CAediting_973813	chr13_113251786_+	ncRNA_intronic
CAediting_973814	chr13_113251801_+	ncRNA_intronic
CAediting_973815	chr13_113251804_+	ncRNA_intronic
CAediting_973816	chr13_113252413_+	ncRNA_intronic
CAediting_973817	chr13_113257145_+	ncRNA_intronic
CAediting_973818	chr13_113258107_+	ncRNA_intronic
CAediting_973819	chr13_113258112_+	ncRNA_intronic
CAediting_973820	chr13_113258120_+	ncRNA_intronic
CAediting_973821	chr13_113258151_+	ncRNA_intronic
CAediting_973822	chr13_113259913_+	ncRNA_intronic
CAediting_973823	chr13_113259942_+	ncRNA_intronic
CAediting_973824	chr13_113259950_+	ncRNA_intronic
CAediting_973825	chr13_113259951_+	ncRNA_intronic
CAediting_973826	chr13_113260028_+	ncRNA_intronic
CAediting_973827	chr13_113260039_+	ncRNA_intronic
CAediting_973828	chr13_113260042_+	ncRNA_intronic
CAediting_973829	chr13_113260043_+	ncRNA_intronic
CAediting_973830	chr13_113260048_+	ncRNA_intronic
CAediting_973831	chr13_113260089_+	ncRNA_intronic
CAediting_973832	chr13_113260098_+	ncRNA_intronic
CAediting_973833	chr13_113260108_+	ncRNA_intronic
CAediting_973834	chr13_113260110_+	ncRNA_intronic
CAediting_973835	chr13_113260116_+	ncRNA_intronic
CAediting_973836	chr13_113260124_+	ncRNA_intronic
CAediting_973837	chr13_113260125_+	ncRNA_intronic
CAediting_973838	chr13_113260301_+	ncRNA_intronic
CAediting_973839	chr13_113260365_+	ncRNA_intronic
CAediting_973840	chr13_113260369_+	ncRNA_intronic
CAediting_973841	chr13_113260411_+	ncRNA_intronic
CAediting_973842	chr13_113260414_+	ncRNA_intronic
CAediting_973843	chr13_113260416_+	ncRNA_intronic
CAediting_973844	chr13_113260419_+	ncRNA_intronic
CAediting_973845	chr13_113260439_+	ncRNA_intronic
CAediting_973846	chr13_113260457_+	ncRNA_intronic
CAediting_973847	chr13_113260462_+	ncRNA_intronic
CAediting_973848	chr13_113260484_+	ncRNA_intronic
CAediting_973849	chr13_113260525_+	ncRNA_intronic
CAediting_973850	chr13_113261842_+	ncRNA_intronic
CAediting_973851	chr13_113261880_+	ncRNA_intronic
CAediting_973852	chr13_113261881_+	ncRNA_intronic
CAediting_973853	chr13_113262552_+	ncRNA_intronic
CAediting_973854	chr13_113262606_+	ncRNA_intronic
CAediting_973855	chr13_113265279_+	UTR3
CAediting_973856	chr13_113265295_+	UTR3
CAediting_973857	chr13_113265346_+	UTR3
CAediting_973858	chr13_113265357_+	UTR3
CAediting_973859	chr13_113265365_+	UTR3
CAediting_973860	chr13_113265491_+	UTR3
CAediting_973861	chr13_113265649_+	UTR3
CAediting_973862	chr13_113265661_+	UTR3
CAediting_973863	chr13_113265677_+	UTR3
CAediting_973864	chr13_113266040_+	UTR3
CAediting_973865	chr13_113266048_+	UTR3
CAediting_973866	chr13_113266055_+	UTR3
CAediting_973867	chr13_113266228_+	UTR3
CAediting_973868	chr13_113266254_+	UTR3
CAediting_973869	chr13_113266259_+	UTR3
CAediting_973870	chr13_113266266_+	UTR3
CAediting_973871	chr13_113266271_+	UTR3
CAediting_973872	chr13_113266281_+	UTR3
CAediting_973873	chr13_113266282_+	UTR3
CAediting_973874	chr13_113266299_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_973708	chr13_113212511_+	SINE	Alu	AluSx1
CAediting_973709	chr13_113212519_+	SINE	Alu	AluSx1
CAediting_973710	chr13_113212528_+	SINE	Alu	AluSx1
CAediting_973711	chr13_113212533_+	SINE	Alu	AluSx1
CAediting_973712	chr13_113212550_+	SINE	Alu	AluSx1
CAediting_973713	chr13_113212558_+	SINE	Alu	AluSx1
CAediting_973714	chr13_113212638_+	SINE	Alu	AluSx1
CAediting_973715	chr13_113213126_+	SINE	Alu	AluJb
CAediting_973716	chr13_113213197_+	SINE	Alu	AluJb
CAediting_973717	chr13_113214538_+	SINE	Alu	AluJo
CAediting_973718	chr13_113214587_+	SINE	Alu	AluJo
CAediting_973719	chr13_113214588_+	SINE	Alu	AluJo
CAediting_973720	chr13_113214591_+	SINE	Alu	AluJo
CAediting_973721	chr13_113214615_+	SINE	Alu	AluJo
CAediting_973722	chr13_113217981_+	SINE	Alu	AluSx1
CAediting_973723	chr13_113221640_+	SINE	Alu	AluSg4
CAediting_973724	chr13_113221719_+	SINE	Alu	AluSg4
CAediting_973725	chr13_113222651_+	SINE	Alu	AluJb
CAediting_973726	chr13_113222657_+	SINE	Alu	AluJb
CAediting_973727	chr13_113222701_+	SINE	Alu	AluJb
CAediting_973728	chr13_113222725_+	SINE	Alu	AluJb
CAediting_973729	chr13_113222802_+	SINE	Alu	AluJb
CAediting_973730	chr13_113222841_+	SINE	Alu	AluJb
CAediting_973731	chr13_113222845_+	SINE	Alu	AluJb
CAediting_973732	chr13_113222852_+	SINE	Alu	AluJb
CAediting_973733	chr13_113223432_+	SINE	Alu	AluSp
CAediting_973734	chr13_113223439_+	SINE	Alu	AluSp
CAediting_973735	chr13_113223459_+	SINE	Alu	AluSp
CAediting_973736	chr13_113223497_+	SINE	Alu	AluSp
CAediting_973737	chr13_113223498_+	SINE	Alu	AluSp
CAediting_973738	chr13_113223515_+	SINE	Alu	AluSp
CAediting_973739	chr13_113223524_+	SINE	Alu	AluSp
CAediting_973740	chr13_113223527_+	SINE	Alu	AluSp
CAediting_973741	chr13_113223537_+	SINE	Alu	AluSp
CAediting_973742	chr13_113223539_+	SINE	Alu	AluSp
CAediting_973743	chr13_113223563_+	SINE	Alu	AluSp
CAediting_973744	chr13_113223564_+	SINE	Alu	AluSp
CAediting_973745	chr13_113223571_+	SINE	Alu	AluSp
CAediting_973746	chr13_113223577_+	SINE	Alu	AluSp
CAediting_973747	chr13_113223580_+	SINE	Alu	AluSp
CAediting_973748	chr13_113223658_+	SINE	Alu	AluSp
CAediting_973749	chr13_113223659_+	SINE	Alu	AluSp
CAediting_973750	chr13_113223671_+	SINE	Alu	AluSp
CAediting_973751	chr13_113223687_+	SINE	Alu	AluSp
CAediting_973752	chr13_113224098_+	SINE	Alu	AluY
CAediting_973753	chr13_113224232_+	SINE	Alu	AluY
CAediting_973754	chr13_113224255_+	SINE	Alu	AluY
CAediting_973755	chr13_113224298_+	SINE	Alu	AluY
CAediting_973756	chr13_113226761_+	SINE	Alu	AluJr
CAediting_973757	chr13_113226805_+	SINE	Alu	AluJr
CAediting_973758	chr13_113227642_+	SINE	Alu	AluSx3
CAediting_973759	chr13_113227678_+	SINE	Alu	AluSx3
CAediting_973760	chr13_113227694_+	SINE	Alu	AluSx3
CAediting_973761	chr13_113227799_+	SINE	Alu	AluSx3
CAediting_973762	chr13_113227857_+	SINE	Alu	AluSx3
CAediting_973763	chr13_113227858_+	SINE	Alu	AluSx3
CAediting_973764	chr13_113229030_+	SINE	Alu	AluYf1
CAediting_973765	chr13_113229049_+	SINE	Alu	AluYf1
CAediting_973766	chr13_113230794_+	SINE	Alu	AluJr
CAediting_973767	chr13_113230810_+	SINE	Alu	AluJr
CAediting_973768	chr13_113230826_+	SINE	Alu	AluJr
CAediting_973769	chr13_113230871_+	SINE	Alu	AluJr
CAediting_973770	chr13_113230916_+	SINE	Alu	AluJr
CAediting_973771	chr13_113230920_+	SINE	Alu	AluJr
CAediting_973772	chr13_113230926_+	SINE	Alu	AluJr
CAediting_973773	chr13_113230962_+	SINE	Alu	AluJr
CAediting_973774	chr13_113231047_+	SINE	Alu	AluJr
CAediting_973775	chr13_113235715_+	SINE	Alu	AluYm1
CAediting_973776	chr13_113235783_+	SINE	Alu	AluYm1
CAediting_973777	chr13_113235791_+	SINE	Alu	AluYm1
CAediting_973778	chr13_113235824_+	SINE	Alu	AluYm1
CAediting_973779	chr13_113235891_+	SINE	Alu	AluYm1
CAediting_973780	chr13_113235991_+	SINE	Alu	AluYm1
CAediting_973781	chr13_113241653_+	SINE	Alu	AluSg7
CAediting_973782	chr13_113241655_+	SINE	Alu	AluSg7
CAediting_973783	chr13_113241724_+	SINE	Alu	AluSg7
CAediting_973784	chr13_113242225_+	SINE	Alu	AluSc
CAediting_973785	chr13_113242580_+	SINE	Alu	AluJb
CAediting_973786	chr13_113242631_+	SINE	Alu	AluJb
CAediting_973787	chr13_113242665_+	SINE	Alu	AluJb
CAediting_973788	chr13_113242706_+	SINE	Alu	AluJb
CAediting_973789	chr13_113242731_+	SINE	Alu	AluJb
CAediting_973790	chr13_113242732_+	SINE	Alu	AluJb
CAediting_973791	chr13_113246926_+	LTR	ERVL-MaLR	MSTB
CAediting_973792	chr13_113246927_+	LTR	ERVL-MaLR	MSTB
CAediting_973793	chr13_113246928_+	LTR	ERVL-MaLR	MSTB
CAediting_973794	chr13_113246932_+	LTR	ERVL-MaLR	MSTB
CAediting_973795	chr13_113246934_+	LTR	ERVL-MaLR	MSTB
CAediting_973796	chr13_113246960_+	LTR	ERVL-MaLR	MSTB
CAediting_973797	chr13_113246961_+	LTR	ERVL-MaLR	MSTB
CAediting_973798	chr13_113246962_+	LTR	ERVL-MaLR	MSTB
CAediting_973799	chr13_113247039_+	LTR	ERVL-MaLR	MSTB
CAediting_973800	chr13_113247043_+	LTR	ERVL-MaLR	MSTB
CAediting_973801	chr13_113247111_+	LTR	ERVL-MaLR	MSTB
CAediting_973802	chr13_113247208_+	LTR	ERVL-MaLR	MSTB
CAediting_973803	chr13_113247218_+	LTR	ERVL-MaLR	MSTB
CAediting_973804	chr13_113247244_+	LTR	ERVL-MaLR	MSTB
CAediting_973805	chr13_113247263_+	LTR	ERVL-MaLR	MSTB
CAediting_973806	chr13_113251520_+	LTR	ERVL-MaLR	MSTA
CAediting_973807	chr13_113251552_+	LTR	ERVL-MaLR	MSTA
CAediting_973808	chr13_113251599_+	LTR	ERVL-MaLR	MSTA
CAediting_973809	chr13_113251632_+	LTR	ERVL-MaLR	MSTA
CAediting_973810	chr13_113251707_+	LTR	ERVL-MaLR	MSTA
CAediting_973811	chr13_113251726_+	LTR	ERVL-MaLR	MSTA
CAediting_973812	chr13_113251754_+	LTR	ERVL-MaLR	MSTA
CAediting_973813	chr13_113251786_+	LTR	ERVL-MaLR	MSTA
CAediting_973814	chr13_113251801_+	LTR	ERVL-MaLR	MSTA
CAediting_973815	chr13_113251804_+	LTR	ERVL-MaLR	MSTA
CAediting_973816	chr13_113252413_+	SINE	Alu	AluJo
CAediting_973817	chr13_113257145_+	SINE	Alu	AluSx
CAediting_973818	chr13_113258107_+	SINE	Alu	AluJo
CAediting_973819	chr13_113258112_+	SINE	Alu	AluJo
CAediting_973820	chr13_113258120_+	SINE	Alu	AluJo
CAediting_973821	chr13_113258151_+	SINE	Alu	AluJo
CAediting_973823	chr13_113259942_+	SINE	Alu	AluY
CAediting_973824	chr13_113259950_+	SINE	Alu	AluY
CAediting_973825	chr13_113259951_+	SINE	Alu	AluY
CAediting_973826	chr13_113260028_+	SINE	Alu	AluY
CAediting_973827	chr13_113260039_+	SINE	Alu	AluY
CAediting_973828	chr13_113260042_+	SINE	Alu	AluY
CAediting_973829	chr13_113260043_+	SINE	Alu	AluY
CAediting_973830	chr13_113260048_+	SINE	Alu	AluY
CAediting_973831	chr13_113260089_+	SINE	Alu	AluY
CAediting_973832	chr13_113260098_+	SINE	Alu	AluY
CAediting_973833	chr13_113260108_+	SINE	Alu	AluY
CAediting_973834	chr13_113260110_+	SINE	Alu	AluY
CAediting_973835	chr13_113260116_+	SINE	Alu	AluY
CAediting_973836	chr13_113260124_+	SINE	Alu	AluY
CAediting_973837	chr13_113260125_+	SINE	Alu	AluY
CAediting_973838	chr13_113260301_+	SINE	Alu	AluSx1
CAediting_973839	chr13_113260365_+	SINE	Alu	AluSx1
CAediting_973840	chr13_113260369_+	SINE	Alu	AluSx1
CAediting_973841	chr13_113260411_+	SINE	Alu	AluSx1
CAediting_973842	chr13_113260414_+	SINE	Alu	AluSx1
CAediting_973843	chr13_113260416_+	SINE	Alu	AluSx1
CAediting_973844	chr13_113260419_+	SINE	Alu	AluSx1
CAediting_973845	chr13_113260439_+	SINE	Alu	AluSx1
CAediting_973846	chr13_113260457_+	SINE	Alu	AluSx1
CAediting_973847	chr13_113260462_+	SINE	Alu	AluSx1
CAediting_973848	chr13_113260484_+	SINE	Alu	AluSx1
CAediting_973849	chr13_113260525_+	SINE	Alu	AluSx1
CAediting_973850	chr13_113261842_+	SINE	Alu	AluSg
CAediting_973851	chr13_113261880_+	SINE	Alu	AluSg
CAediting_973852	chr13_113261881_+	SINE	Alu	AluSg
CAediting_973853	chr13_113262552_+	SINE	Alu	AluJo
CAediting_973854	chr13_113262606_+	SINE	Alu	AluJo
CAediting_973855	chr13_113265279_+	SINE	Alu	AluJo
CAediting_973856	chr13_113265295_+	SINE	Alu	AluJo
CAediting_973857	chr13_113265346_+	SINE	Alu	AluJo
CAediting_973858	chr13_113265357_+	SINE	Alu	AluJo
CAediting_973859	chr13_113265365_+	SINE	Alu	AluJo
CAediting_973860	chr13_113265491_+	SINE	Alu	AluSx1
CAediting_973861	chr13_113265649_+	SINE	Alu	AluSx1
CAediting_973862	chr13_113265661_+	SINE	Alu	AluSx1
CAediting_973863	chr13_113265677_+	SINE	Alu	AluSx1
CAediting_973864	chr13_113266040_+	SINE	Alu	AluJr
CAediting_973865	chr13_113266048_+	SINE	Alu	AluJr
CAediting_973866	chr13_113266055_+	SINE	Alu	AluJr
CAediting_973867	chr13_113266228_+	SINE	Alu	AluJr
CAediting_973868	chr13_113266254_+	SINE	Alu	AluJr
CAediting_973869	chr13_113266259_+	SINE	Alu	AluJr
CAediting_973870	chr13_113266266_+	SINE	Alu	AluJr
CAediting_973871	chr13_113266271_+	SINE	Alu	AluJr
CAediting_973872	chr13_113266281_+	SINE	Alu	AluJr
CAediting_973873	chr13_113266282_+	SINE	Alu	AluJr
CAediting_973874	chr13_113266299_+	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for CUL4A

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000139842.13.CUL4A.

Correlation between RNA A-to-I editing and PSI for ENSG00000139842.13.CUL4A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CUL4A

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CUL4A

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CUL4A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_973856	chr13_113265295_+	ENSG00000139842.13	ENST00000617546	hsa-miR-140-3p	113265290	113265296	7mer-m8	113265277	113265297	164.00	-24.73
CAediting_973858	chr13_113265357_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6840-3p	113265351	113265357	7mer-m8	113265339	113265358	145.00	-21.40
CAediting_973861	chr13_113265649_+	ENSG00000139842.13	ENST00000617546	hsa-miR-3189-3p	113265643	113265649	7mer-m8	113265628	113265650	145.00	-20.77
CAediting_973861	chr13_113265649_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6813-3p	113265644	113265650	7mer-m8	113265631	113265651	140.00	-15.63
CAediting_973862	chr13_113265661_+	ENSG00000139842.13	ENST00000617546	hsa-miR-106a-3p	113265657	113265662	6mer	113265642	113265663	141.00	-21.13
CAediting_973863	chr13_113265677_+	ENSG00000139842.13	ENST00000617546	hsa-miR-564	113265674	113265680	7mer-m8	113265660	113265681	153.00	-25.97
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-340-3p	113266034	113266040	7mer-m8	113266019	113266041	144.00	-15.89
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6827-3p	113266034	113266040	7mer-m8	113266021	113266041	145.00	-16.55
CAediting_973867	chr13_113266228_+	ENSG00000139842.13	ENST00000617546	hsa-miR-221-5p	113266222	113266228	7mer-m8	113266208	113266229	153.00	-18.23
CAediting_973867	chr13_113266228_+	ENSG00000139842.13	ENST00000617546	hsa-miR-3128	113266221	113266227	7mer-m8	113266204	113266228	154.00	-16.86
CAediting_973867	chr13_113266228_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6779-3p	113266225	113266231	7mer-m8	113266212	113266232	142.00	-12.30
CAediting_973867	chr13_113266228_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6868-5p	113266222	113266227	6mer	113266207	113266228	140.00	-14.55
CAediting_973867	chr13_113266228_+	ENSG00000139842.13	ENST00000617546	hsa-miR-8073	113266222	113266228	7mer-m8	113266208	113266229	156.00	-25.69
CAediting_973868	chr13_113266254_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4649-3p	113266247	113266253	7mer-m8	113266234	113266254	147.00	-18.42
CAediting_973868	chr13_113266254_+	ENSG00000139842.13	ENST00000617546	hsa-miR-544b	113266248	113266254	7mer-m8	113266234	113266255	145.00	-18.15
CAediting_973868	chr13_113266254_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6078	113266250	113266257	8mer-1a	113266238	113266257	156.00	-24.08
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-1827	113266263	113266270	8mer-1a	113266253	113266270	154.00	-17.92
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4722-5p	113266260	113266266	7mer-m8	113266240	113266267	158.00	-34.58
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4763-3p	113266262	113266267	6mer	113266246	113266268	140.00	-27.92
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6808-5p	113266262	113266268	7mer-m8	113266249	113266269	151.00	-20.11
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6893-5p	113266262	113266268	7mer-m8	113266248	113266269	146.00	-18.00
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-940	113266262	113266268	7mer-m8	113266249	113266269	149.00	-20.49
CAediting_973872	chr13_113266281_+	ENSG00000139842.13	ENST00000617546	hsa-miR-1298-3p	113266276	113266282	7mer-m8	113266262	113266283	150.00	-19.02
CAediting_973872	chr13_113266281_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4667-5p	113266274	113266281	8mer-1a	113266259	113266281	159.00	-24.34
CAediting_973872	chr13_113266281_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4700-5p	113266274	113266281	8mer-1a	113266257	113266281	148.00	-24.05
CAediting_973872	chr13_113266281_+	ENSG00000139842.13	ENST00000617546	hsa-miR-8089	113266274	113266281	8mer-1a	113266257	113266281	154.00	-24.84
CAediting_973873	chr13_113266282_+	ENSG00000139842.13	ENST00000617546	hsa-miR-12126	113266276	113266282	7mer-m8	113266260	113266283	150.00	-15.12
CAediting_973873	chr13_113266282_+	ENSG00000139842.13	ENST00000617546	hsa-miR-3614-5p	113266277	113266283	7mer-m8	113266266	113266284	151.00	-19.93
CAediting_973873	chr13_113266282_+	ENSG00000139842.13	ENST00000617546	hsa-miR-383-3p	113266280	113266286	7mer-m8	113266269	113266287	140.00	-14.22
CAediting_973869	chr13_113266259_+	ENSG00000139842.13	ENST00000617546	hsa-miR-2467-5p	113266256	113266262	7mer-m8	113266240	113266263	155.00	-20.46

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-let-7f-5p	113266263	113266270	8mer-1a	113266249	113266270	154	-16.62
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-let-7f-5p	113266263	113266270	8mer-1a	113266249	113266270	154	-16.62
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-let-7g-5p	113266263	113266270	8mer-1a	113266248	113266270	155	-19.11
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-10a-5p	113266037	113266043	7mer-m8	113266024	113266044	147	-14.21
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-10b-5p	113266037	113266043	7mer-m8	113266022	113266044	140	-11.43
CAediting_973866	chr13_113266055_+	ENSG00000139842.13	ENST00000617546	hsa-miR-125a-3p	113266052	113266058	7mer-m8	113266037	113266059	147	-20.53
CAediting_973867	chr13_113266228_+	ENSG00000139842.13	ENST00000617546	hsa-miR-1271-5p	113266222	113266227	6mer	113266205	113266228	150	-27.1
CAediting_973868	chr13_113266254_+	ENSG00000139842.13	ENST00000617546	hsa-miR-1304-5p	113266247	113266253	7mer-m8	113266232	113266254	153	-19.81
CAediting_973867	chr13_113266228_+	ENSG00000139842.13	ENST00000617546	hsa-miR-212-5p	113266223	113266229	7mer-m8	113266208	113266230	142	-15.36
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-339-5p	113266036	113266042	7mer-m8	113266022	113266043	145	-15.94
CAediting_973863	chr13_113265677_+	ENSG00000139842.13	ENST00000617546	hsa-miR-3622b-5p	113265674	113265680	7mer-m8	113265662	113265681	154	-21.37
CAediting_973871	chr13_113266271_+	ENSG00000139842.13	ENST00000617546	hsa-miR-3929	113266268	113266274	7mer-m8	113266254	113266275	155	-18.39
CAediting_973858	chr13_113265357_+	ENSG00000139842.13	ENST00000617546	hsa-miR-3934-3p	113265352	113265359	8mer-1a	113265338	113265359	148	-24.48
CAediting_973855	chr13_113265279_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4252	113265277	113265283	7mer-m8	113265265	113265284	149	-16.48
CAediting_973863	chr13_113265677_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4253	113265675	113265681	7mer-m8	113265665	113265682	140	-14.26
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4266	113266259	113266265	7mer-m8	113266248	113266266	144	-15.18
CAediting_973873	chr13_113266282_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4310	113266280	113266286	7mer-m8	113266272	113266287	140	-8.38
CAediting_973870	chr13_113266266_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4458	113266263	113266270	8mer-1a	113266252	113266270	147	-17.73
CAediting_973871	chr13_113266271_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4478	113266268	113266274	7mer-m8	113266257	113266275	154	-26.9
CAediting_973872	chr13_113266281_+	ENSG00000139842.13	ENST00000617546	hsa-miR-450a-2-3p	113266274	113266281	8mer-1a	113266260	113266281	140	-12.1
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4725-5p	113266038	113266044	7mer-m8	113266025	113266045	140	-15.96
CAediting_973871	chr13_113266271_+	ENSG00000139842.13	ENST00000617546	hsa-miR-485-5p	113266269	113266275	7mer-m8	113266257	113266276	142	-14.45
CAediting_973855	chr13_113265279_+	ENSG00000139842.13	ENST00000617546	hsa-miR-5008-3p	113265273	113265279	7mer-m8	113265260	113265280	147	-14
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-504-5p	113266038	113266044	7mer-m8	113266023	113266045	146	-19.1
CAediting_973866	chr13_113266055_+	ENSG00000139842.13	ENST00000617546	hsa-miR-542-3p	113266049	113266055	7mer-m8	113266036	113266056	152	-16.05
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-5699-3p	113266035	113266041	7mer-m8	113266021	113266042	146	-16.39
CAediting_973857	chr13_113265346_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6128	113265341	113265347	7mer-1a	113265328	113265347	140	-16.41
CAediting_973874	chr13_113266299_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6514-3p	113266292	113266298	7mer-m8	113266279	113266299	155	-17.23
CAediting_973855	chr13_113265279_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6737-3p	113265273	113265279	7mer-m8	113265259	113265280	143	-12.65
CAediting_973864	chr13_113266040_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6818-3p	113266033	113266039	7mer-m8	113266019	113266040	140	-11.1
CAediting_973863	chr13_113265677_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6862-5p	113265675	113265681	7mer-m8	113265661	113265682	152	-22.32
CAediting_973863	chr13_113265677_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6862-5p	113265675	113265681	7mer-m8	113265661	113265682	152	-22.32
CAediting_973859	chr13_113265365_+	ENSG00000139842.13	ENST00000617546	hsa-miR-6883-3p	113265362	113265368	7mer-m8	113265348	113265369	143	-16.1
CAediting_973856	chr13_113265295_+	ENSG00000139842.13	ENST00000617546	hsa-miR-7151-3p	113265288	113265294	7mer-m8	113265271	113265295	149	-25.17
CAediting_973873	chr13_113266282_+	ENSG00000139842.13	ENST00000617546	hsa-miR-7157-5p	113266280	113266286	7mer-m8	113266267	113266287	141	-14.66
CAediting_973871	chr13_113266271_+	ENSG00000139842.13	ENST00000617546	hsa-miR-7160-5p	113266266	113266272	7mer-m8	113266253	113266273	155	-21.13
CAediting_973871	chr13_113266271_+	ENSG00000139842.13	ENST00000617546	hsa-miR-7162-3p	113266265	113266271	7mer-m8	113266254	113266272	148	-16.47
CAediting_973856	chr13_113265295_+	ENSG00000139842.13	ENST00000617546	hsa-miR-8052	113265294	113265300	7mer-1a	113265282	113265300	140	-24.15

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000375441	hsa-miR-200b-3p	113264023	113264029	7mer-m8	113264009	113264030	140	-12.14
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000326335	hsa-miR-200b-3p	113264023	113264029	7mer-m8	113264009	113264030	140	-12.14
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000451881	hsa-miR-200b-3p	113264023	113264029	7mer-m8	113264009	113264030	140	-12.14
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000617546	hsa-miR-200b-3p	113264023	113264029	7mer-m8	113264009	113264030	140	-12.14
CAediting_1229414	chr17_67471546_+	ENSG00000139842.13	ENST00000617546	hsa-miR-548aa	113265599	113265605	7mer-m8	113265582	113265606	140	-10.86
CAediting_1160181	chr17_7017644_-	ENSG00000139842.13	ENST00000617546	hsa-miR-195-3p	113266579	113266585	7mer-m8	113266565	113266586	140	-9.59
CAediting_1399425	chr20_1392958_-	ENSG00000139842.13	ENST00000617546	hsa-miR-6869-5p	113266720	113266726	7mer-m8	113266705	113266727	149	-20.89
CAediting_396018	chr5_1062918_-	ENSG00000139842.13	ENST00000617546	hsa-miR-4635	113266248	113266254	7mer-m8	113266235	113266255	158	-19.78
CAediting_414656	chr5_72878640_+	ENSG00000139842.13	ENST00000617546	hsa-miR-4804-3p	113266940	113266946	7mer-m8	113266928	113266947	153	-14.65
CAediting_524911	chr7_5495852_-	ENSG00000139842.13	ENST00000617546	hsa-miR-589-3p	113265417	113265423	7mer-m8	113265400	113265424	158	-21.22
CAediting_1229413	chr17_67471544_+	ENSG00000139842.13	ENST00000488558	hsa-miR-548aa	113229780	113229786	7mer-m8	113229761	113229787	153	-21.6
CAediting_1524209	chrX_134546392_-	ENSG00000139842.13	ENST00000488558	hsa-miR-503-5p	113229861	113229866	6mer	113229847	113229867	146	-22.78

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000139842.13	ENST00000375441	hsa-miR-195-3p	113264987	113264993	7mer-m8	113264975	113264994	152	-11.22
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000375441	hsa-miR-200b-3p	113264375	113264381	7mer-m8	113264359	113264382	151	-9.39
CAediting_1229413	chr17_67471544_+	ENSG00000139842.13	ENST00000375441	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229414	chr17_67471546_+	ENSG00000139842.13	ENST00000375441	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229415	chr17_67471547_+	ENSG00000139842.13	ENST00000375441	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_228905	chr2_188297554_+	ENSG00000139842.13	ENST00000375441	hsa-miR-561-3p	113265056	113265062	7mer-m8	113265042	113265063	142	-8.16
CAediting_1160181	chr17_7017644_-	ENSG00000139842.13	ENST00000326335	hsa-miR-195-3p	113264987	113264993	7mer-m8	113264975	113264994	152	-11.22
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000326335	hsa-miR-200b-3p	113264375	113264381	7mer-m8	113264359	113264382	151	-9.39
CAediting_1229413	chr17_67471544_+	ENSG00000139842.13	ENST00000326335	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229414	chr17_67471546_+	ENSG00000139842.13	ENST00000326335	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229415	chr17_67471547_+	ENSG00000139842.13	ENST00000326335	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_228905	chr2_188297554_+	ENSG00000139842.13	ENST00000326335	hsa-miR-561-3p	113265056	113265062	7mer-m8	113265042	113265063	142	-8.16
CAediting_1160181	chr17_7017644_-	ENSG00000139842.13	ENST00000451881	hsa-miR-195-3p	113264987	113264993	7mer-m8	113264975	113264994	152	-11.22
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000451881	hsa-miR-200b-3p	113264375	113264381	7mer-m8	113264359	113264382	151	-9.39
CAediting_1229413	chr17_67471544_+	ENSG00000139842.13	ENST00000451881	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229414	chr17_67471546_+	ENSG00000139842.13	ENST00000451881	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229415	chr17_67471547_+	ENSG00000139842.13	ENST00000451881	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_228905	chr2_188297554_+	ENSG00000139842.13	ENST00000451881	hsa-miR-561-3p	113265056	113265062	7mer-m8	113265042	113265063	142	-8.16
CAediting_1160181	chr17_7017644_-	ENSG00000139842.13	ENST00000617546	hsa-miR-195-3p	113264987	113264993	7mer-m8	113264975	113264994	152	-11.22
CAediting_393	chr1_1167164_+	ENSG00000139842.13	ENST00000617546	hsa-miR-200b-3p	113264375	113264381	7mer-m8	113264359	113264382	151	-9.39
CAediting_1054808	chr15_66496985_-	ENSG00000139842.13	ENST00000617546	hsa-miR-4512	113266420	113266426	7mer-m8	113266408	113266427	142	-20.14
CAediting_1229413	chr17_67471544_+	ENSG00000139842.13	ENST00000617546	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229414	chr17_67471546_+	ENSG00000139842.13	ENST00000617546	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_1229415	chr17_67471547_+	ENSG00000139842.13	ENST00000617546	hsa-miR-548aa	113264545	113264551	7mer-m8	113264528	113264552	140	-9.25
CAediting_228905	chr2_188297554_+	ENSG00000139842.13	ENST00000617546	hsa-miR-561-3p	113265056	113265062	7mer-m8	113265042	113265063	142	-8.16
CAediting_228905	chr2_188297554_+	ENSG00000139842.13	ENST00000617546	hsa-miR-561-3p	113266707	113266712	6mer	113266693	113266713	149	-16.89

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CUL4A

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CUL4A

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_973859	chr13_113265365_+	6.05715908053732e-05	0.466587866127255	.	.	.	.

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Relation with cancer stages for CUL4A

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for CUL4A

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for CUL4A

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CUL4A

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
CUL4A	C0004238	Atrial Fibrillation	2	CTD_human
CUL4A	C0235480	Paroxysmal atrial fibrillation	2	CTD_human
CUL4A	C2585653	Persistent atrial fibrillation	2	CTD_human
CUL4A	C3468561	familial atrial fibrillation	2	CTD_human
CUL4A	C0014518	Toxic Epidermal Necrolysis	1	CTD_human
CUL4A	C0038325	Stevens-Johnson Syndrome	1	CTD_human
CUL4A	C1274933	Drug-Induced Stevens Johnson Syndrome	1	CTD_human
CUL4A	C3658301	Mycoplasma-Induced Stevens-Johnson Syndrome	1	CTD_human
CUL4A	C3658302	Stevens-Johnson Syndrome Toxic Epidermal Necrolysis Spectrum	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene