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Editing gene: FAM120B (CAeditome ID:84498)

Gene summary for FAM120B

Gene summary

Gene information	Gene symbol	FAM120B
	Gene ID	84498
	Gene name	family with sequence similarity 120B
	Synonyms	CCPG\|KIAA1838\|PGCC1\|SAN1\|dJ894D12.1
	Cytomap	6q27
	Type of gene	protein-coding
	Description	constitutive coactivator of peroxisome proliferator-activated receptor gammaPPARG constitutive coactivator 1PPARgamma constitutive coactivator 1constitutive coactivator of PPAR-gammasenataxin-associated nuclease 1
	Modification date	20210518
	UniProtAcc	Q96EK7
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for FAM120B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000112584.12

RNA A-to-I editing events in Cancer.

CAediting_519015(170317795, +), CAediting_519016(170318802, +), CAediting_519017(170318817, +), CAediting_519018(170325710, +), CAediting_519019(170333625, +), CAediting_519020(170333627, +), CAediting_519021(170333721, +), CAediting_519022(170359137, +), CAediting_519023(170359163, +), CAediting_519024(170359191, +), CAediting_519025(170359254, +), CAediting_519026(170359258, +), CAediting_519027(170359272, +), CAediting_519028(170359282, +), CAediting_519029(170359313, +), CAediting_519030(170359343, +), CAediting_519031(170359353, +), CAediting_519032(170359467, +), CAediting_519033(170359471, +), CAediting_519034(170359479, +), CAediting_519035(170359490, +), CAediting_519036(170359533, +), CAediting_519037(170359555, +), CAediting_519038(170359557, +), CAediting_519039(170359561, +), CAediting_519040(170359673, +), CAediting_519041(170359674, +), CAediting_519042(170359700, +), CAediting_519043(170359701, +), CAediting_519044(170361813, +), CAediting_519045(170361960, +), CAediting_519046(170362029, +), CAediting_519047(170362062, +), CAediting_519048(170362920, +), CAediting_519049(170380407, +), CAediting_519050(170380630, +), CAediting_519051(170380650, +), CAediting_519052(170380774, +), CAediting_519053(170382205, +), CAediting_519054(170382206, +), CAediting_519055(170382211, +), CAediting_519056(170382237, +), CAediting_519057(170382239, +), CAediting_519058(170383315, +), CAediting_519059(170383369, +), CAediting_519060(170383371, +), CAediting_519061(170383374, +), CAediting_519062(170383436, +), CAediting_519063(170383439, +), CAediting_519064(170383441, +), CAediting_519065(170383442, +), CAediting_519066(170383443, +), CAediting_519067(170383451, +), CAediting_519068(170383458, +), CAediting_519069(170383459, +), CAediting_519070(170383479, +), CAediting_519071(170383486, +), CAediting_519072(170383511, +), CAediting_519073(170383531, +), CAediting_519074(170383542, +), CAediting_519075(170383550, +), CAediting_519076(170391279, +), CAediting_519077(170391280, +), CAediting_519078(170391329, +), CAediting_519079(170391334, +), CAediting_519080(170391336, +), CAediting_519081(170391358, +), CAediting_519082(170391359, +), CAediting_519083(170391370, +), CAediting_519084(170391374, +), CAediting_519085(170391376, +), CAediting_519086(170391377, +), CAediting_519087(170391379, +), CAediting_519088(170391382, +), CAediting_519089(170391388, +), CAediting_519090(170391389, +), CAediting_519091(170391414, +), CAediting_519092(170391415, +), CAediting_519093(170391437, +), CAediting_519094(170391441, +), CAediting_519095(170391450, +), CAediting_519096(170391455, +), CAediting_519097(170391456, +), CAediting_519098(170391484, +), CAediting_519099(170391490, +), CAediting_519100(170391537, +), CAediting_519101(170391538, +), CAediting_519102(170391539, +), CAediting_519103(170392159, +), CAediting_519104(170392232, +), CAediting_519105(170392238, +), CAediting_519106(170392282, +), CAediting_519107(170392288, +), CAediting_519108(170392302, +), CAediting_519109(170392307, +), CAediting_519110(170392308, +), CAediting_519111(170392312, +), CAediting_519112(170392325, +), CAediting_519113(170392337, +), CAediting_519114(170392347, +), CAediting_519115(170392349, +), CAediting_519116(170392373, +), CAediting_519117(170392374, +), CAediting_519118(170392382, +), CAediting_519119(170392391, +), CAediting_519120(170392393, +), CAediting_519121(170392396, +), CAediting_519122(170392428, +), CAediting_519123(170392437, +), CAediting_519124(170393056, +), CAediting_519125(170393057, +),

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RNA editing positional annotations for FAM120B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_519015	chr6_170317795_+	exonic
CAediting_519016	chr6_170318802_+	exonic
CAediting_519017	chr6_170318817_+	exonic
CAediting_519018	chr6_170325710_+	intronic
CAediting_519019	chr6_170333625_+	intronic
CAediting_519020	chr6_170333627_+	intronic
CAediting_519021	chr6_170333721_+	intronic
CAediting_519022	chr6_170359137_+	intronic
CAediting_519023	chr6_170359163_+	intronic
CAediting_519024	chr6_170359191_+	intronic
CAediting_519025	chr6_170359254_+	intronic
CAediting_519026	chr6_170359258_+	intronic
CAediting_519027	chr6_170359272_+	intronic
CAediting_519028	chr6_170359282_+	intronic
CAediting_519029	chr6_170359313_+	intronic
CAediting_519030	chr6_170359343_+	intronic
CAediting_519031	chr6_170359353_+	intronic
CAediting_519032	chr6_170359467_+	intronic
CAediting_519033	chr6_170359471_+	intronic
CAediting_519034	chr6_170359479_+	intronic
CAediting_519035	chr6_170359490_+	intronic
CAediting_519036	chr6_170359533_+	intronic
CAediting_519037	chr6_170359555_+	intronic
CAediting_519038	chr6_170359557_+	intronic
CAediting_519039	chr6_170359561_+	intronic
CAediting_519040	chr6_170359673_+	intronic
CAediting_519041	chr6_170359674_+	intronic
CAediting_519042	chr6_170359700_+	intronic
CAediting_519043	chr6_170359701_+	intronic
CAediting_519044	chr6_170361813_+	intronic
CAediting_519045	chr6_170361960_+	intronic
CAediting_519046	chr6_170362029_+	intronic
CAediting_519047	chr6_170362062_+	intronic
CAediting_519048	chr6_170362920_+	intronic
CAediting_519049	chr6_170380407_+	intronic
CAediting_519050	chr6_170380630_+	intronic
CAediting_519051	chr6_170380650_+	intronic
CAediting_519052	chr6_170380774_+	intronic
CAediting_519053	chr6_170382205_+	intronic
CAediting_519054	chr6_170382206_+	intronic
CAediting_519055	chr6_170382211_+	intronic
CAediting_519056	chr6_170382237_+	intronic
CAediting_519057	chr6_170382239_+	intronic
CAediting_519058	chr6_170383315_+	intronic
CAediting_519059	chr6_170383369_+	intronic
CAediting_519060	chr6_170383371_+	intronic
CAediting_519061	chr6_170383374_+	intronic
CAediting_519062	chr6_170383436_+	intronic
CAediting_519063	chr6_170383439_+	intronic
CAediting_519064	chr6_170383441_+	intronic
CAediting_519065	chr6_170383442_+	intronic
CAediting_519066	chr6_170383443_+	intronic
CAediting_519067	chr6_170383451_+	intronic
CAediting_519068	chr6_170383458_+	intronic
CAediting_519069	chr6_170383459_+	intronic
CAediting_519070	chr6_170383479_+	intronic
CAediting_519071	chr6_170383486_+	intronic
CAediting_519072	chr6_170383511_+	intronic
CAediting_519073	chr6_170383531_+	intronic
CAediting_519074	chr6_170383542_+	intronic
CAediting_519075	chr6_170383550_+	intronic
CAediting_519076	chr6_170391279_+	intronic
CAediting_519077	chr6_170391280_+	intronic
CAediting_519078	chr6_170391329_+	intronic
CAediting_519079	chr6_170391334_+	intronic
CAediting_519080	chr6_170391336_+	intronic
CAediting_519081	chr6_170391358_+	intronic
CAediting_519082	chr6_170391359_+	intronic
CAediting_519083	chr6_170391370_+	intronic
CAediting_519084	chr6_170391374_+	intronic
CAediting_519085	chr6_170391376_+	intronic
CAediting_519086	chr6_170391377_+	intronic
CAediting_519087	chr6_170391379_+	intronic
CAediting_519088	chr6_170391382_+	intronic
CAediting_519089	chr6_170391388_+	intronic
CAediting_519090	chr6_170391389_+	intronic
CAediting_519091	chr6_170391414_+	intronic
CAediting_519092	chr6_170391415_+	intronic
CAediting_519093	chr6_170391437_+	intronic
CAediting_519094	chr6_170391441_+	intronic
CAediting_519095	chr6_170391450_+	intronic
CAediting_519096	chr6_170391455_+	intronic
CAediting_519097	chr6_170391456_+	intronic
CAediting_519098	chr6_170391484_+	intronic
CAediting_519099	chr6_170391490_+	intronic
CAediting_519100	chr6_170391537_+	intronic
CAediting_519101	chr6_170391538_+	intronic
CAediting_519102	chr6_170391539_+	intronic
CAediting_519103	chr6_170392159_+	intronic
CAediting_519104	chr6_170392232_+	intronic
CAediting_519105	chr6_170392238_+	intronic
CAediting_519106	chr6_170392282_+	intronic
CAediting_519107	chr6_170392288_+	intronic
CAediting_519108	chr6_170392302_+	intronic
CAediting_519109	chr6_170392307_+	intronic
CAediting_519110	chr6_170392308_+	intronic
CAediting_519111	chr6_170392312_+	intronic
CAediting_519112	chr6_170392325_+	intronic
CAediting_519113	chr6_170392337_+	intronic
CAediting_519114	chr6_170392347_+	intronic
CAediting_519115	chr6_170392349_+	intronic
CAediting_519116	chr6_170392373_+	intronic
CAediting_519117	chr6_170392374_+	intronic
CAediting_519118	chr6_170392382_+	intronic
CAediting_519119	chr6_170392391_+	intronic
CAediting_519120	chr6_170392393_+	intronic
CAediting_519121	chr6_170392396_+	intronic
CAediting_519122	chr6_170392428_+	intronic
CAediting_519123	chr6_170392437_+	intronic
CAediting_519124	chr6_170393056_+	intronic
CAediting_519125	chr6_170393057_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_519018	chr6_170325710_+	SINE	Alu	AluSq2
CAediting_519019	chr6_170333625_+	SINE	Alu	AluSz6
CAediting_519020	chr6_170333627_+	SINE	Alu	AluSz6
CAediting_519021	chr6_170333721_+	SINE	Alu	AluSz6
CAediting_519022	chr6_170359137_+	SINE	Alu	AluSq2
CAediting_519023	chr6_170359163_+	SINE	Alu	AluSq2
CAediting_519024	chr6_170359191_+	SINE	Alu	AluSq2
CAediting_519025	chr6_170359254_+	SINE	Alu	AluSq2
CAediting_519026	chr6_170359258_+	SINE	Alu	AluSq2
CAediting_519027	chr6_170359272_+	SINE	Alu	AluSq2
CAediting_519028	chr6_170359282_+	SINE	Alu	AluSq2
CAediting_519029	chr6_170359313_+	SINE	Alu	AluSq2
CAediting_519030	chr6_170359343_+	SINE	Alu	AluSq2
CAediting_519031	chr6_170359353_+	SINE	Alu	AluSq2
CAediting_519032	chr6_170359467_+	SINE	Alu	AluJr
CAediting_519033	chr6_170359471_+	SINE	Alu	AluJr
CAediting_519034	chr6_170359479_+	SINE	Alu	AluJr
CAediting_519035	chr6_170359490_+	SINE	Alu	AluJr
CAediting_519036	chr6_170359533_+	SINE	Alu	AluJr
CAediting_519037	chr6_170359555_+	SINE	Alu	AluJr
CAediting_519038	chr6_170359557_+	SINE	Alu	AluJr
CAediting_519039	chr6_170359561_+	SINE	Alu	AluJr
CAediting_519040	chr6_170359673_+	SINE	Alu	AluJr
CAediting_519041	chr6_170359674_+	SINE	Alu	AluJr
CAediting_519042	chr6_170359700_+	SINE	Alu	AluJr
CAediting_519043	chr6_170359701_+	SINE	Alu	AluJr
CAediting_519044	chr6_170361813_+	SINE	Alu	AluSz
CAediting_519045	chr6_170361960_+	SINE	Alu	AluSz
CAediting_519046	chr6_170362029_+	SINE	Alu	AluSz
CAediting_519047	chr6_170362062_+	SINE	Alu	AluSz
CAediting_519048	chr6_170362920_+	SINE	Alu	AluJo
CAediting_519049	chr6_170380407_+	LINE	L1	L1MA9
CAediting_519050	chr6_170380630_+	LINE	L1	L1MA9
CAediting_519051	chr6_170380650_+	LINE	L1	L1MA9
CAediting_519052	chr6_170380774_+	LINE	L1	L1MA9
CAediting_519053	chr6_170382205_+	SINE	Alu	AluJb
CAediting_519054	chr6_170382206_+	SINE	Alu	AluJb
CAediting_519055	chr6_170382211_+	SINE	Alu	AluJb
CAediting_519056	chr6_170382237_+	SINE	Alu	AluJb
CAediting_519057	chr6_170382239_+	SINE	Alu	AluJb
CAediting_519058	chr6_170383315_+	LINE	L1	L1MD1
CAediting_519059	chr6_170383369_+	LINE	L1	L1MD1
CAediting_519060	chr6_170383371_+	LINE	L1	L1MD1
CAediting_519061	chr6_170383374_+	LINE	L1	L1MD1
CAediting_519062	chr6_170383436_+	LINE	L1	L1MD1
CAediting_519063	chr6_170383439_+	LINE	L1	L1MD1
CAediting_519064	chr6_170383441_+	LINE	L1	L1MD1
CAediting_519065	chr6_170383442_+	LINE	L1	L1MD1
CAediting_519066	chr6_170383443_+	LINE	L1	L1MD1
CAediting_519067	chr6_170383451_+	LINE	L1	L1MD1
CAediting_519068	chr6_170383458_+	LINE	L1	L1MD1
CAediting_519069	chr6_170383459_+	LINE	L1	L1MD1
CAediting_519070	chr6_170383479_+	LINE	L1	L1MD1
CAediting_519071	chr6_170383486_+	LINE	L1	L1MD1
CAediting_519072	chr6_170383511_+	LINE	L1	L1MD1
CAediting_519073	chr6_170383531_+	LINE	L1	L1MD1
CAediting_519074	chr6_170383542_+	LINE	L1	L1MD1
CAediting_519075	chr6_170383550_+	LINE	L1	L1MD1
CAediting_519076	chr6_170391279_+	SINE	Alu	AluSx1
CAediting_519077	chr6_170391280_+	SINE	Alu	AluSx1
CAediting_519078	chr6_170391329_+	SINE	Alu	AluSx1
CAediting_519079	chr6_170391334_+	SINE	Alu	AluSx1
CAediting_519080	chr6_170391336_+	SINE	Alu	AluSx1
CAediting_519081	chr6_170391358_+	SINE	Alu	AluSx1
CAediting_519082	chr6_170391359_+	SINE	Alu	AluSx1
CAediting_519083	chr6_170391370_+	SINE	Alu	AluSx1
CAediting_519084	chr6_170391374_+	SINE	Alu	AluSx1
CAediting_519085	chr6_170391376_+	SINE	Alu	AluSx1
CAediting_519086	chr6_170391377_+	SINE	Alu	AluSx1
CAediting_519087	chr6_170391379_+	SINE	Alu	AluSx1
CAediting_519088	chr6_170391382_+	SINE	Alu	AluSx1
CAediting_519089	chr6_170391388_+	SINE	Alu	AluSx1
CAediting_519090	chr6_170391389_+	SINE	Alu	AluSx1
CAediting_519091	chr6_170391414_+	SINE	Alu	AluSx1
CAediting_519092	chr6_170391415_+	SINE	Alu	AluSx1
CAediting_519093	chr6_170391437_+	SINE	Alu	AluSx1
CAediting_519094	chr6_170391441_+	SINE	Alu	AluSx1
CAediting_519095	chr6_170391450_+	SINE	Alu	AluSx1
CAediting_519096	chr6_170391455_+	SINE	Alu	AluSx1
CAediting_519097	chr6_170391456_+	SINE	Alu	AluSx1
CAediting_519098	chr6_170391484_+	SINE	Alu	AluSx1
CAediting_519099	chr6_170391490_+	SINE	Alu	AluSx1
CAediting_519100	chr6_170391537_+	SINE	Alu	AluSx1
CAediting_519101	chr6_170391538_+	SINE	Alu	AluSx1
CAediting_519102	chr6_170391539_+	SINE	Alu	AluSx1
CAediting_519103	chr6_170392159_+	LINE	L1	L1M5
CAediting_519104	chr6_170392232_+	SINE	Alu	AluSc
CAediting_519105	chr6_170392238_+	SINE	Alu	AluSc
CAediting_519106	chr6_170392282_+	SINE	Alu	AluSc
CAediting_519107	chr6_170392288_+	SINE	Alu	AluSc
CAediting_519108	chr6_170392302_+	SINE	Alu	AluSc
CAediting_519109	chr6_170392307_+	SINE	Alu	AluSc
CAediting_519110	chr6_170392308_+	SINE	Alu	AluSc
CAediting_519111	chr6_170392312_+	SINE	Alu	AluSc
CAediting_519112	chr6_170392325_+	SINE	Alu	AluSc
CAediting_519113	chr6_170392337_+	SINE	Alu	AluSc
CAediting_519114	chr6_170392347_+	SINE	Alu	AluSc
CAediting_519115	chr6_170392349_+	SINE	Alu	AluSc
CAediting_519116	chr6_170392373_+	SINE	Alu	AluSc
CAediting_519117	chr6_170392374_+	SINE	Alu	AluSc
CAediting_519118	chr6_170392382_+	SINE	Alu	AluSc
CAediting_519119	chr6_170392391_+	SINE	Alu	AluSc
CAediting_519120	chr6_170392393_+	SINE	Alu	AluSc
CAediting_519121	chr6_170392396_+	SINE	Alu	AluSc
CAediting_519122	chr6_170392428_+	SINE	Alu	AluSc
CAediting_519123	chr6_170392437_+	SINE	Alu	AluSc
CAediting_519124	chr6_170393056_+	SINE	Alu	FLAM_C
CAediting_519125	chr6_170393057_+	SINE	Alu	FLAM_C

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RNA A-to-I editing events in the alternative splicing sites for FAM120B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_519016	chr6_170318802_+	170318802:170318824	3SS	0+20i	AAGAAGTTCCCATGTATACAGGC	-18.56	GAGAAGTTCCCATGTATACAGGC	-18.46
IR	CAediting_519017	chr6_170318817_+	170318802:170318824	3SS	0+5i	AAGAAGTTCCCATGTATACAGGC	-18.56	AAGAAGTTCCCATGTGTACAGGC	-19.6
IR	CAediting_519017	chr6_170318817_+	170318815:170318837	3SS	0+18i	GTATACAGGCCCTGAATCCAGGC	-17.99	GTGTACAGGCCCTGAATCCAGGC	-17.22

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000112584.12.FAM120B.

Correlation between RNA A-to-I editing and PSI for ENSG00000112584.12.FAM120B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM120B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for FAM120B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for FAM120B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000112584.12	ENST00000630384	hsa-miR-548aa	170405243	170405249	7mer-m8	170405225	170405250	145	-9.01
CAediting_1351755	chr19_40282625_-	ENSG00000112584.12	ENST00000630384	hsa-miR-641	170404904	170404909	6mer	170404885	170404910	141	-15.38
CAediting_1351755	chr19_40282625_-	ENSG00000112584.12	ENST00000537664	hsa-miR-641	170404904	170404909	6mer	170404885	170404910	141	-15.38
CAediting_1229415	chr17_67471547_+	ENSG00000112584.12	ENST00000625626	hsa-miR-548aa	170405243	170405249	7mer-m8	170405225	170405250	145	-9.01
CAediting_1351755	chr19_40282625_-	ENSG00000112584.12	ENST00000625626	hsa-miR-641	170404904	170404909	6mer	170404885	170404910	141	-15.38
CAediting_468389	chr6_31355314_-	ENSG00000112584.12	ENST00000630384	hsa-miR-6891-5p	170404815	170404821	7mer-m8	170404802	170404822	156	-27.14
CAediting_468389	chr6_31355314_-	ENSG00000112584.12	ENST00000537664	hsa-miR-6891-5p	170404815	170404821	7mer-m8	170404802	170404822	156	-27.14
CAediting_468389	chr6_31355314_-	ENSG00000112584.12	ENST00000625626	hsa-miR-6891-5p	170404815	170404821	7mer-m8	170404802	170404822	156	-27.14

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for FAM120B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000476287.2	protein_coding
ENST00000537664.4	protein_coding
ENST00000630384.1	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_519015	ENST00000476287.2	chr6_170317795_+	-1512.50	-1510.90	-1518.60
CAediting_519016	ENST00000476287.2	chr6_170318802_+	-1511.90	-1510.90	-1518.60
CAediting_519017	ENST00000476287.2	chr6_170318817_+	-1510.90	-1510.90	-1518.60
CAediting_519015	ENST00000537664.4	chr6_170317795_+	-980.70	-979.50	-984.80
CAediting_519016	ENST00000537664.4	chr6_170318802_+	-980.20	-979.50	-984.80
CAediting_519017	ENST00000537664.4	chr6_170318817_+	-979.50	-979.50	-984.80
CAediting_519015	ENST00000630384.1	chr6_170317795_+	-1158.60	-1155.60	-1162.80
CAediting_519016	ENST00000630384.1	chr6_170318802_+	-1156.00	-1155.60	-1162.80
CAediting_519017	ENST00000630384.1	chr6_170318817_+	-1155.60	-1155.60	-1162.80

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Relation with ADAR for FAM120B

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for FAM120B

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for FAM120B

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for FAM120B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for FAM120B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene