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Editing gene: ARFGAP2 (CAeditome ID:84364)

Gene summary for ARFGAP2

Gene summary

Gene information	Gene symbol	ARFGAP2
	Gene ID	84364
	Gene name	ADP ribosylation factor GTPase activating protein 2
	Synonyms	IRZ\|NBLA10535\|ZFP289\|ZNF289
	Cytomap	11p11.2
	Type of gene	protein-coding
	Description	ADP-ribosylation factor GTPase-activating protein 2GTPase-activating protein ZNF289zinc finger protein 289, ID1 regulated
	Modification date	20210518
	UniProtAcc	Q8N6H7
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ARFGAP2	GO:0005794	ADP-ribosylation factor GTPase-activating protein 2	0000052
ARFGAP2	GO:0005829	ADP-ribosylation factor GTPase-activating protein 2	0000052
ARFGAP2	GO:0005886	ADP-ribosylation factor GTPase-activating protein 2	0000052

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RNA A-to-I events for ARFGAP2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000149182.13

RNA A-to-I editing events in Cancer.

CAediting_810027(47165977, -), CAediting_810028(47166002, -), CAediting_810029(47166003, -), CAediting_810030(47166134, -), CAediting_810031(47168533, -), CAediting_810032(47168534, -), CAediting_810033(47168578, -), CAediting_810034(47168586, -), CAediting_810035(47168588, -), CAediting_810036(47168589, -), CAediting_810037(47168593, -), CAediting_810038(47168610, -), CAediting_810039(47168617, -), CAediting_810040(47168618, -), CAediting_810041(47168626, -), CAediting_810042(47168629, -), CAediting_810043(47168630, -), CAediting_810044(47168632, -), CAediting_810045(47168636, -), CAediting_810046(47168653, -), CAediting_810047(47168659, -), CAediting_810048(47168684, -), CAediting_810049(47168688, -), CAediting_810050(47168689, -), CAediting_810051(47168690, -), CAediting_810052(47168691, -), CAediting_810053(47168692, -), CAediting_810054(47168694, -), CAediting_810055(47168696, -), CAediting_810056(47168697, -), CAediting_810057(47168698, -), CAediting_810058(47168699, -), CAediting_810059(47168705, -), CAediting_810060(47168716, -), CAediting_810061(47168717, -), CAediting_810062(47168718, -), CAediting_810063(47168726, -), CAediting_810064(47168727, -), CAediting_810065(47168736, -), CAediting_810066(47168741, -), CAediting_810067(47168747, -), CAediting_810068(47168750, -), CAediting_810069(47168754, -), CAediting_810070(47168773, -), CAediting_810071(47168774, -), CAediting_810072(47168787, -), CAediting_810073(47168795, -), CAediting_810074(47168796, -), CAediting_810075(47168798, -), CAediting_810076(47168804, -), CAediting_810077(47168812, -), CAediting_810078(47168814, -), CAediting_810079(47168818, -), CAediting_810080(47168834, -), CAediting_810081(47168835, -), CAediting_810082(47169055, -), CAediting_810083(47169057, -), CAediting_810084(47169124, -), CAediting_810085(47169132, -), CAediting_810086(47169146, -), CAediting_810087(47169155, -), CAediting_810088(47169166, -), CAediting_810089(47169206, -), CAediting_810090(47169214, -), CAediting_810091(47169237, -), CAediting_810092(47169238, -), CAediting_810093(47169251, -), CAediting_810094(47169252, -), CAediting_810095(47169257, -), CAediting_810096(47169585, -), CAediting_810097(47169599, -), CAediting_810098(47169601, -), CAediting_810099(47169613, -), CAediting_810100(47169614, -), CAediting_810101(47169666, -), CAediting_810102(47169701, -), CAediting_810103(47169708, -), CAediting_810104(47169709, -), CAediting_810105(47169726, -), CAediting_810106(47169739, -), CAediting_810107(47169743, -), CAediting_810108(47169744, -), CAediting_810109(47169763, -), CAediting_810110(47169769, -), CAediting_810111(47169774, -), CAediting_810112(47169793, -), CAediting_810113(47169819, -), CAediting_810114(47169821, -), CAediting_810115(47169823, -), CAediting_810116(47170059, -), CAediting_810117(47170114, -), CAediting_810118(47170117, -), CAediting_810119(47170122, -), CAediting_810120(47170123, -), CAediting_810121(47170145, -), CAediting_810122(47170159, -), CAediting_810123(47170202, -), CAediting_810124(47170212, -), CAediting_810125(47170224, -), CAediting_810126(47170237, -), CAediting_810127(47170238, -), CAediting_810128(47170242, -), CAediting_810129(47170262, -), CAediting_810130(47170272, -), CAediting_810131(47170302, -), CAediting_810132(47170466, -), CAediting_810133(47170696, -), CAediting_810134(47170710, -), CAediting_810135(47170774, -), CAediting_810136(47170780, -), CAediting_810137(47170798, -), CAediting_810138(47170824, -), CAediting_810139(47170838, -), CAediting_810140(47170851, -), CAediting_810141(47170883, -), CAediting_810142(47170889, -), CAediting_810143(47170894, -), CAediting_810144(47170899, -), CAediting_810145(47170920, -), CAediting_810146(47170942, -), CAediting_810147(47170944, -), CAediting_810148(47171214, -), CAediting_810149(47174484, -), CAediting_810150(47174485, -),

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RNA editing positional annotations for ARFGAP2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_810027	chr11_47165977_-	ncRNA_intronic
CAediting_810028	chr11_47166002_-	ncRNA_intronic
CAediting_810029	chr11_47166003_-	ncRNA_intronic
CAediting_810030	chr11_47166134_-	ncRNA_intronic
CAediting_810031	chr11_47168533_-	ncRNA_exonic
CAediting_810032	chr11_47168534_-	ncRNA_exonic
CAediting_810033	chr11_47168578_-	ncRNA_exonic
CAediting_810034	chr11_47168586_-	ncRNA_exonic
CAediting_810035	chr11_47168588_-	ncRNA_splicing
CAediting_810036	chr11_47168589_-	ncRNA_intronic
CAediting_810037	chr11_47168593_-	ncRNA_intronic
CAediting_810038	chr11_47168610_-	ncRNA_intronic
CAediting_810039	chr11_47168617_-	ncRNA_intronic
CAediting_810040	chr11_47168618_-	ncRNA_intronic
CAediting_810041	chr11_47168626_-	ncRNA_intronic
CAediting_810042	chr11_47168629_-	ncRNA_intronic
CAediting_810043	chr11_47168630_-	ncRNA_intronic
CAediting_810044	chr11_47168632_-	ncRNA_intronic
CAediting_810045	chr11_47168636_-	ncRNA_intronic
CAediting_810046	chr11_47168653_-	ncRNA_intronic
CAediting_810047	chr11_47168659_-	ncRNA_intronic
CAediting_810048	chr11_47168684_-	ncRNA_intronic
CAediting_810049	chr11_47168688_-	ncRNA_intronic
CAediting_810050	chr11_47168689_-	ncRNA_intronic
CAediting_810051	chr11_47168690_-	ncRNA_intronic
CAediting_810052	chr11_47168691_-	ncRNA_intronic
CAediting_810053	chr11_47168692_-	ncRNA_intronic
CAediting_810054	chr11_47168694_-	ncRNA_intronic
CAediting_810055	chr11_47168696_-	ncRNA_intronic
CAediting_810056	chr11_47168697_-	ncRNA_intronic
CAediting_810057	chr11_47168698_-	ncRNA_intronic
CAediting_810058	chr11_47168699_-	ncRNA_intronic
CAediting_810059	chr11_47168705_-	ncRNA_intronic
CAediting_810060	chr11_47168716_-	ncRNA_intronic
CAediting_810061	chr11_47168717_-	ncRNA_intronic
CAediting_810062	chr11_47168718_-	ncRNA_intronic
CAediting_810063	chr11_47168726_-	ncRNA_intronic
CAediting_810064	chr11_47168727_-	ncRNA_intronic
CAediting_810065	chr11_47168736_-	ncRNA_intronic
CAediting_810066	chr11_47168741_-	ncRNA_intronic
CAediting_810067	chr11_47168747_-	ncRNA_intronic
CAediting_810068	chr11_47168750_-	ncRNA_intronic
CAediting_810069	chr11_47168754_-	ncRNA_intronic
CAediting_810070	chr11_47168773_-	ncRNA_intronic
CAediting_810071	chr11_47168774_-	ncRNA_intronic
CAediting_810072	chr11_47168787_-	ncRNA_intronic
CAediting_810073	chr11_47168795_-	ncRNA_intronic
CAediting_810074	chr11_47168796_-	ncRNA_intronic
CAediting_810075	chr11_47168798_-	ncRNA_intronic
CAediting_810076	chr11_47168804_-	ncRNA_intronic
CAediting_810077	chr11_47168812_-	ncRNA_intronic
CAediting_810078	chr11_47168814_-	ncRNA_intronic
CAediting_810079	chr11_47168818_-	ncRNA_intronic
CAediting_810080	chr11_47168834_-	ncRNA_intronic
CAediting_810081	chr11_47168835_-	ncRNA_intronic
CAediting_810082	chr11_47169055_-	ncRNA_intronic
CAediting_810083	chr11_47169057_-	ncRNA_intronic
CAediting_810084	chr11_47169124_-	ncRNA_intronic
CAediting_810085	chr11_47169132_-	ncRNA_intronic
CAediting_810086	chr11_47169146_-	ncRNA_intronic
CAediting_810087	chr11_47169155_-	ncRNA_intronic
CAediting_810088	chr11_47169166_-	ncRNA_intronic
CAediting_810089	chr11_47169206_-	ncRNA_intronic
CAediting_810090	chr11_47169214_-	ncRNA_intronic
CAediting_810091	chr11_47169237_-	ncRNA_intronic
CAediting_810092	chr11_47169238_-	ncRNA_intronic
CAediting_810093	chr11_47169251_-	ncRNA_intronic
CAediting_810094	chr11_47169252_-	ncRNA_intronic
CAediting_810095	chr11_47169257_-	ncRNA_intronic
CAediting_810096	chr11_47169585_-	ncRNA_intronic
CAediting_810097	chr11_47169599_-	ncRNA_intronic
CAediting_810098	chr11_47169601_-	ncRNA_intronic
CAediting_810099	chr11_47169613_-	ncRNA_intronic
CAediting_810100	chr11_47169614_-	ncRNA_intronic
CAediting_810101	chr11_47169666_-	ncRNA_intronic
CAediting_810102	chr11_47169701_-	ncRNA_intronic
CAediting_810103	chr11_47169708_-	ncRNA_intronic
CAediting_810104	chr11_47169709_-	ncRNA_intronic
CAediting_810105	chr11_47169726_-	ncRNA_intronic
CAediting_810106	chr11_47169739_-	ncRNA_intronic
CAediting_810107	chr11_47169743_-	ncRNA_intronic
CAediting_810108	chr11_47169744_-	ncRNA_intronic
CAediting_810109	chr11_47169763_-	ncRNA_intronic
CAediting_810110	chr11_47169769_-	ncRNA_intronic
CAediting_810111	chr11_47169774_-	ncRNA_intronic
CAediting_810112	chr11_47169793_-	ncRNA_intronic
CAediting_810113	chr11_47169819_-	ncRNA_intronic
CAediting_810114	chr11_47169821_-	ncRNA_intronic
CAediting_810115	chr11_47169823_-	ncRNA_intronic
CAediting_810116	chr11_47170059_-	ncRNA_intronic
CAediting_810117	chr11_47170114_-	ncRNA_intronic
CAediting_810118	chr11_47170117_-	ncRNA_intronic
CAediting_810119	chr11_47170122_-	ncRNA_intronic
CAediting_810120	chr11_47170123_-	ncRNA_intronic
CAediting_810121	chr11_47170145_-	ncRNA_intronic
CAediting_810122	chr11_47170159_-	ncRNA_intronic
CAediting_810123	chr11_47170202_-	ncRNA_intronic
CAediting_810124	chr11_47170212_-	ncRNA_intronic
CAediting_810125	chr11_47170224_-	ncRNA_intronic
CAediting_810126	chr11_47170237_-	ncRNA_intronic
CAediting_810127	chr11_47170238_-	ncRNA_intronic
CAediting_810128	chr11_47170242_-	ncRNA_intronic
CAediting_810129	chr11_47170262_-	ncRNA_intronic
CAediting_810130	chr11_47170272_-	ncRNA_intronic
CAediting_810131	chr11_47170302_-	ncRNA_intronic
CAediting_810132	chr11_47170466_-	ncRNA_intronic
CAediting_810133	chr11_47170696_-	ncRNA_intronic
CAediting_810134	chr11_47170710_-	ncRNA_intronic
CAediting_810135	chr11_47170774_-	ncRNA_intronic
CAediting_810136	chr11_47170780_-	ncRNA_intronic
CAediting_810137	chr11_47170798_-	ncRNA_intronic
CAediting_810138	chr11_47170824_-	ncRNA_intronic
CAediting_810139	chr11_47170838_-	ncRNA_intronic
CAediting_810140	chr11_47170851_-	ncRNA_intronic
CAediting_810141	chr11_47170883_-	ncRNA_intronic
CAediting_810142	chr11_47170889_-	ncRNA_intronic
CAediting_810143	chr11_47170894_-	ncRNA_intronic
CAediting_810144	chr11_47170899_-	ncRNA_intronic
CAediting_810145	chr11_47170920_-	ncRNA_intronic
CAediting_810146	chr11_47170942_-	ncRNA_intronic
CAediting_810147	chr11_47170944_-	ncRNA_intronic
CAediting_810148	chr11_47171214_-	ncRNA_intronic
CAediting_810149	chr11_47174484_-	ncRNA_exonic
CAediting_810150	chr11_47174485_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_810027	chr11_47165977_-	SINE	Alu	AluSz6
CAediting_810028	chr11_47166002_-	SINE	Alu	AluSz6
CAediting_810029	chr11_47166003_-	SINE	Alu	AluSz6
CAediting_810030	chr11_47166134_-	SINE	Alu	AluSz6
CAediting_810031	chr11_47168533_-	SINE	Alu	AluSz6
CAediting_810032	chr11_47168534_-	SINE	Alu	AluSz6
CAediting_810033	chr11_47168578_-	SINE	Alu	AluSz6
CAediting_810034	chr11_47168586_-	SINE	Alu	AluSz6
CAediting_810035	chr11_47168588_-	SINE	Alu	AluSz6
CAediting_810036	chr11_47168589_-	SINE	Alu	AluSz6
CAediting_810037	chr11_47168593_-	SINE	Alu	AluSz6
CAediting_810038	chr11_47168610_-	SINE	Alu	AluSz6
CAediting_810039	chr11_47168617_-	SINE	Alu	AluSz6
CAediting_810040	chr11_47168618_-	SINE	Alu	AluSz6
CAediting_810041	chr11_47168626_-	SINE	Alu	AluSz6
CAediting_810042	chr11_47168629_-	SINE	Alu	AluSz6
CAediting_810043	chr11_47168630_-	SINE	Alu	AluSz6
CAediting_810044	chr11_47168632_-	SINE	Alu	AluSz6
CAediting_810045	chr11_47168636_-	SINE	Alu	AluSz6
CAediting_810046	chr11_47168653_-	SINE	Alu	AluSz6
CAediting_810047	chr11_47168659_-	SINE	Alu	AluSz6
CAediting_810048	chr11_47168684_-	SINE	Alu	AluSz6
CAediting_810049	chr11_47168688_-	SINE	Alu	AluSz6
CAediting_810050	chr11_47168689_-	SINE	Alu	AluSz6
CAediting_810051	chr11_47168690_-	SINE	Alu	AluSz6
CAediting_810052	chr11_47168691_-	SINE	Alu	AluSz6
CAediting_810053	chr11_47168692_-	SINE	Alu	AluSz6
CAediting_810054	chr11_47168694_-	SINE	Alu	AluSz6
CAediting_810055	chr11_47168696_-	SINE	Alu	AluSz6
CAediting_810056	chr11_47168697_-	SINE	Alu	AluSz6
CAediting_810057	chr11_47168698_-	SINE	Alu	AluSz6
CAediting_810058	chr11_47168699_-	SINE	Alu	AluSz6
CAediting_810059	chr11_47168705_-	SINE	Alu	AluSz6
CAediting_810060	chr11_47168716_-	SINE	Alu	AluSz6
CAediting_810061	chr11_47168717_-	SINE	Alu	AluSz6
CAediting_810062	chr11_47168718_-	SINE	Alu	AluSz6
CAediting_810063	chr11_47168726_-	SINE	Alu	AluSz6
CAediting_810064	chr11_47168727_-	SINE	Alu	AluSz6
CAediting_810065	chr11_47168736_-	SINE	Alu	AluSz6
CAediting_810066	chr11_47168741_-	SINE	Alu	AluSz6
CAediting_810067	chr11_47168747_-	SINE	Alu	AluSz6
CAediting_810068	chr11_47168750_-	SINE	Alu	AluSz6
CAediting_810069	chr11_47168754_-	SINE	Alu	AluSz6
CAediting_810070	chr11_47168773_-	SINE	Alu	AluSz6
CAediting_810071	chr11_47168774_-	SINE	Alu	AluSz6
CAediting_810072	chr11_47168787_-	SINE	Alu	AluSz6
CAediting_810073	chr11_47168795_-	SINE	Alu	AluSz6
CAediting_810074	chr11_47168796_-	SINE	Alu	AluSz6
CAediting_810075	chr11_47168798_-	SINE	Alu	AluSz6
CAediting_810076	chr11_47168804_-	SINE	Alu	AluSz6
CAediting_810077	chr11_47168812_-	SINE	Alu	AluSz6
CAediting_810078	chr11_47168814_-	SINE	Alu	AluSz6
CAediting_810079	chr11_47168818_-	SINE	Alu	AluSz6
CAediting_810082	chr11_47169055_-	SINE	Alu	AluY
CAediting_810083	chr11_47169057_-	SINE	Alu	AluY
CAediting_810084	chr11_47169124_-	SINE	Alu	AluY
CAediting_810085	chr11_47169132_-	SINE	Alu	AluY
CAediting_810086	chr11_47169146_-	SINE	Alu	AluY
CAediting_810087	chr11_47169155_-	SINE	Alu	AluY
CAediting_810088	chr11_47169166_-	SINE	Alu	AluY
CAediting_810089	chr11_47169206_-	SINE	Alu	AluY
CAediting_810090	chr11_47169214_-	SINE	Alu	AluY
CAediting_810091	chr11_47169237_-	SINE	Alu	AluY
CAediting_810092	chr11_47169238_-	SINE	Alu	AluY
CAediting_810093	chr11_47169251_-	SINE	Alu	AluY
CAediting_810094	chr11_47169252_-	SINE	Alu	AluY
CAediting_810095	chr11_47169257_-	SINE	Alu	AluY
CAediting_810096	chr11_47169585_-	SINE	Alu	AluSp
CAediting_810097	chr11_47169599_-	SINE	Alu	AluSp
CAediting_810098	chr11_47169601_-	SINE	Alu	AluSp
CAediting_810099	chr11_47169613_-	SINE	Alu	AluSp
CAediting_810100	chr11_47169614_-	SINE	Alu	AluSp
CAediting_810101	chr11_47169666_-	SINE	Alu	AluSp
CAediting_810102	chr11_47169701_-	SINE	Alu	AluSp
CAediting_810103	chr11_47169708_-	SINE	Alu	AluSp
CAediting_810104	chr11_47169709_-	SINE	Alu	AluSp
CAediting_810105	chr11_47169726_-	SINE	Alu	AluSp
CAediting_810106	chr11_47169739_-	SINE	Alu	AluSp
CAediting_810107	chr11_47169743_-	SINE	Alu	AluSp
CAediting_810108	chr11_47169744_-	SINE	Alu	AluSp
CAediting_810109	chr11_47169763_-	SINE	Alu	AluSp
CAediting_810110	chr11_47169769_-	SINE	Alu	AluSp
CAediting_810111	chr11_47169774_-	SINE	Alu	AluSp
CAediting_810112	chr11_47169793_-	SINE	Alu	AluSp
CAediting_810113	chr11_47169819_-	SINE	Alu	AluSp
CAediting_810114	chr11_47169821_-	SINE	Alu	AluSp
CAediting_810115	chr11_47169823_-	SINE	Alu	AluSp
CAediting_810116	chr11_47170059_-	SINE	Alu	AluSz
CAediting_810117	chr11_47170114_-	SINE	Alu	AluSz
CAediting_810118	chr11_47170117_-	SINE	Alu	AluSz
CAediting_810119	chr11_47170122_-	SINE	Alu	AluSz
CAediting_810120	chr11_47170123_-	SINE	Alu	AluSz
CAediting_810121	chr11_47170145_-	SINE	Alu	AluSz
CAediting_810122	chr11_47170159_-	SINE	Alu	AluSz
CAediting_810123	chr11_47170202_-	SINE	Alu	AluSz
CAediting_810124	chr11_47170212_-	SINE	Alu	AluSz
CAediting_810125	chr11_47170224_-	SINE	Alu	AluSz
CAediting_810126	chr11_47170237_-	SINE	Alu	AluSz
CAediting_810127	chr11_47170238_-	SINE	Alu	AluSz
CAediting_810128	chr11_47170242_-	SINE	Alu	AluSz
CAediting_810129	chr11_47170262_-	SINE	Alu	AluSz
CAediting_810130	chr11_47170272_-	SINE	Alu	AluSz
CAediting_810131	chr11_47170302_-	SINE	Alu	AluSz
CAediting_810132	chr11_47170466_-	SINE	Alu	AluSz
CAediting_810133	chr11_47170696_-	SINE	Alu	AluJb
CAediting_810134	chr11_47170710_-	SINE	Alu	AluJb
CAediting_810135	chr11_47170774_-	SINE	Alu	AluJb
CAediting_810136	chr11_47170780_-	SINE	Alu	AluJb
CAediting_810137	chr11_47170798_-	SINE	Alu	AluJb
CAediting_810138	chr11_47170824_-	SINE	Alu	AluJb
CAediting_810139	chr11_47170838_-	SINE	Alu	AluJb
CAediting_810140	chr11_47170851_-	SINE	Alu	AluJb
CAediting_810141	chr11_47170883_-	SINE	Alu	AluJb
CAediting_810142	chr11_47170889_-	SINE	Alu	AluJb
CAediting_810143	chr11_47170894_-	SINE	Alu	AluJb
CAediting_810144	chr11_47170899_-	SINE	Alu	AluJb
CAediting_810145	chr11_47170920_-	SINE	Alu	AluJb
CAediting_810146	chr11_47170942_-	SINE	Alu	AluJb
CAediting_810147	chr11_47170944_-	SINE	Alu	AluJb
CAediting_810149	chr11_47174484_-	SINE	Alu	AluYb9
CAediting_810150	chr11_47174485_-	SINE	Alu	AluYb9

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RNA A-to-I editing events in the alternative splicing sites for ARFGAP2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000149182.13.ARFGAP2.

Correlation between RNA A-to-I editing and PSI for ENSG00000149182.13.ARFGAP2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ARFGAP2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ARFGAP2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ARFGAP2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000149182.13	ENST00000533243	hsa-miR-195-3p	47166345	47166350	6mer	47166344	47166367	150	-19.34
CAediting_86358	chr1_109598906_+	ENSG00000149182.13	ENST00000529439	hsa-miR-197-5p	47176636	47176643	8mer-1a	47176636	47176658	168	-29.35
CAediting_86358	chr1_109598906_+	ENSG00000149182.13	ENST00000528708	hsa-miR-197-5p	47176636	47176643	8mer-1a	47176636	47176658	168	-29.35

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_580943	chr7_100356700_+	ENSG00000149182.13	ENST00000426335	hsa-miR-6840-3p	47164613	47164619	7mer-m8	47164612	47164633	150	-19.26
CAediting_580943	chr7_100356700_+	ENSG00000149182.13	ENST00000627920	hsa-miR-6840-3p	47164613	47164619	7mer-m8	47164612	47164633	150	-19.26
CAediting_580943	chr7_100356700_+	ENSG00000149182.13	ENST00000524782	hsa-miR-6840-3p	47164613	47164619	7mer-m8	47164612	47164633	150	-19.26
CAediting_1524209	chrX_134546392_-	ENSG00000149182.13	ENST00000524586	hsa-miR-503-5p	47175332	47175338	7mer-m8	47175331	47175353	142	-15.29

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ARFGAP2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ARFGAP2

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_810075	chr11_47168798_-	0.010414152831218	0.232107454543569	.	.	.	.
OV	CAediting_810111	chr11_47169774_-	0.00709660657780021	0.28834138037329	.	.	.	.

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Relation with cancer stages for ARFGAP2

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_810036	chr11_47168589_-	0.0259878183804449	-0.399474069783
KIRC	pathologic_stage	CAediting_810047	chr11_47168659_-	0.0122375720328986	0.195231797647677
LUSC	pathologic_stage	CAediting_810047	chr11_47168659_-	0.0102086472045773	0.248511965261715
LUSC	pathologic_stage	CAediting_810075	chr11_47168798_-	0.000316575207976896	0.392532154085881
STAD	pathologic_stage	CAediting_810035	chr11_47168588_-	0.0403077403974395	0.204424935075318
STAD	pathologic_stage	CAediting_810036	chr11_47168589_-	0.0235614563128586	0.22192953633898

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Relation with survival for ARFGAP2

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
ESCA	CAediting_810047	chr11_47168659_-	0.0103171951458317	0.0233593	12.1855
PAAD	CAediting_810047	chr11_47168659_-	0.0330545172244013	0.0157284	0.0166681

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RelatedDrugs for ARFGAP2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ARFGAP2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ARFGAP2	C0024623	Malignant neoplasm of stomach	1	CTD_human
ARFGAP2	C0038356	Stomach Neoplasms	1	CTD_human
ARFGAP2	C0235874	Disease Exacerbation	1	CTD_human
ARFGAP2	C1708349	Hereditary Diffuse Gastric Cancer	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene