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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: COG8 (CAeditome ID:84342)

Gene summary for COG8

check button Gene summary
Gene informationGene symbol

COG8

Gene ID

84342

Gene namecomponent of oligomeric golgi complex 8
SynonymsCDG2H|DOR1
Cytomap

16q22.1

Type of geneprotein-coding
Descriptionconserved oligomeric Golgi complex subunit 8COG complex subunit 8conserved oligomeric golgi complex component 8dependent on RIC1
Modification date20210518
UniProtAcc

Q96MW5

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
COG8

GO:0005794

Conserved oligomeric Golgi complex subunit 8

0000052

COG8

GO:0017119

Conserved oligomeric Golgi complex subunit 8

15047703


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RNA A-to-I events for COG8

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000213380.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1125990(69327174, -), CAediting_1125991(69327180, -), CAediting_1125992(69327181, -), CAediting_1125993(69327197, -), CAediting_1125994(69327198, -), CAediting_1125995(69327203, -), CAediting_1125996(69327233, -), CAediting_1125997(69327235, -), CAediting_1125998(69327244, -), CAediting_1125999(69327251, -), CAediting_1126000(69327253, -), CAediting_1126001(69327257, -), CAediting_1126002(69327264, -), CAediting_1126003(69327265, -), CAediting_1126004(69327266, -), CAediting_1126005(69327273, -), CAediting_1126006(69327274, -), CAediting_1126007(69327276, -), CAediting_1126008(69327289, -), CAediting_1126009(69327300, -), CAediting_1126010(69327302, -), CAediting_1126011(69327305, -), CAediting_1126012(69327306, -), CAediting_1126013(69327316, -), CAediting_1126014(69327332, -), CAediting_1126015(69327336, -), CAediting_1126016(69327337, -), CAediting_1126017(69327338, -), CAediting_1126018(69327343, -), CAediting_1126019(69327344, -), CAediting_1126020(69327345, -), CAediting_1126021(69327346, -), CAediting_1126022(69327347, -), CAediting_1126023(69327350, -), CAediting_1126024(69327361, -), CAediting_1126025(69327362, -), CAediting_1126026(69327363, -), CAediting_1126027(69327369, -), CAediting_1126028(69327371, -), CAediting_1126029(69327384, -), CAediting_1126030(69327386, -), CAediting_1126031(69327387, -), CAediting_1126032(69327392, -), CAediting_1126033(69327395, -), CAediting_1126034(69327400, -), CAediting_1126035(69327405, -), CAediting_1126036(69327410, -), CAediting_1126037(69327414, -), CAediting_1126038(69327418, -), CAediting_1126039(69327419, -), CAediting_1126040(69327424, -), CAediting_1126041(69327432, -), CAediting_1126042(69327435, -), CAediting_1126043(69327440, -), CAediting_1126044(69327441, -), CAediting_1126045(69327449, -), CAediting_1126046(69327463, -), CAediting_1126047(69327735, -), CAediting_1126048(69327767, -), CAediting_1126049(69327768, -), CAediting_1126050(69327791, -), CAediting_1126051(69327795, -), CAediting_1126052(69327808, -), CAediting_1126053(69327809, -), CAediting_1126054(69327820, -), CAediting_1126055(69327832, -), CAediting_1126056(69327843, -), CAediting_1126057(69327845, -), CAediting_1126058(69327847, -), CAediting_1126059(69327852, -), CAediting_1126060(69327978, -), CAediting_1126061(69327982, -), CAediting_1126062(69328006, -), CAediting_1126063(69328011, -), CAediting_1126064(69328016, -), CAediting_1126065(69328025, -), CAediting_1126066(69328027, -), CAediting_1126067(69328032, -), CAediting_1126068(69328038, -), CAediting_1126069(69328041, -), CAediting_1126070(69328045, -), CAediting_1126071(69328046, -), CAediting_1126072(69328051, -), CAediting_1126073(69328054, -), CAediting_1126074(69328059, -), CAediting_1126075(69328063, -), CAediting_1126076(69328064, -), CAediting_1126077(69328069, -), CAediting_1126078(69328085, -), CAediting_1126079(69328086, -), CAediting_1126080(69328092, -), CAediting_1126081(69328095, -), CAediting_1126082(69328112, -), CAediting_1126083(69328115, -), CAediting_1126084(69328116, -), CAediting_1126085(69328117, -), CAediting_1126086(69328118, -), CAediting_1126087(69328121, -), CAediting_1126088(69328125, -), CAediting_1126089(69328126, -), CAediting_1126090(69328130, -), CAediting_1126091(69328141, -), CAediting_1126092(69328151, -), CAediting_1126093(69328152, -), CAediting_1126094(69328164, -), CAediting_1126095(69328166, -), CAediting_1126096(69328167, -), CAediting_1126097(69328175, -), CAediting_1126098(69328213, -), CAediting_1126099(69328219, -), CAediting_1126100(69328227, -), CAediting_1126101(69328241, -), CAediting_1126102(69331565, -), CAediting_1126103(69331773, -), CAediting_1126104(69331774, -), CAediting_1126105(69333223, -), CAediting_1126106(69333239, -), CAediting_1126107(69333259, -), CAediting_1126108(69333264, -), CAediting_1126109(69333272, -), CAediting_1126110(69333282, -), CAediting_1126111(69333283, -), CAediting_1126112(69333295, -), CAediting_1126113(69333299, -), CAediting_1126114(69333305, -), CAediting_1126115(69333313, -), CAediting_1126116(69333320, -), CAediting_1126117(69333327, -), CAediting_1126118(69333331, -), CAediting_1126119(69333336, -), CAediting_1126120(69333347, -), CAediting_1126121(69333368, -), CAediting_1126122(69333424, -), CAediting_1126123(69333432, -), CAediting_1126124(69333449, -), CAediting_1126125(69333457, -), CAediting_1126126(69333744, -), CAediting_1126127(69333745, -), CAediting_1126128(69333754, -), CAediting_1126129(69333771, -), CAediting_1126130(69333784, -), CAediting_1126131(69333785, -), CAediting_1126132(69333786, -),

Top

RNA editing positional annotations for COG8 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1125990chr16_69327174_-ncRNA_intronic
CAediting_1125991chr16_69327180_-ncRNA_intronic
CAediting_1125992chr16_69327181_-ncRNA_intronic
CAediting_1125993chr16_69327197_-ncRNA_intronic
CAediting_1125994chr16_69327198_-ncRNA_intronic
CAediting_1125995chr16_69327203_-ncRNA_intronic
CAediting_1125996chr16_69327233_-ncRNA_intronic
CAediting_1125997chr16_69327235_-ncRNA_intronic
CAediting_1125998chr16_69327244_-ncRNA_intronic
CAediting_1125999chr16_69327251_-ncRNA_intronic
CAediting_1126000chr16_69327253_-ncRNA_intronic
CAediting_1126001chr16_69327257_-ncRNA_intronic
CAediting_1126002chr16_69327264_-ncRNA_intronic
CAediting_1126003chr16_69327265_-ncRNA_intronic
CAediting_1126004chr16_69327266_-ncRNA_intronic
CAediting_1126005chr16_69327273_-ncRNA_intronic
CAediting_1126006chr16_69327274_-ncRNA_intronic
CAediting_1126007chr16_69327276_-ncRNA_intronic
CAediting_1126008chr16_69327289_-ncRNA_intronic
CAediting_1126009chr16_69327300_-ncRNA_intronic
CAediting_1126010chr16_69327302_-ncRNA_intronic
CAediting_1126011chr16_69327305_-ncRNA_intronic
CAediting_1126012chr16_69327306_-ncRNA_intronic
CAediting_1126013chr16_69327316_-ncRNA_intronic
CAediting_1126014chr16_69327332_-ncRNA_intronic
CAediting_1126015chr16_69327336_-ncRNA_intronic
CAediting_1126016chr16_69327337_-ncRNA_intronic
CAediting_1126017chr16_69327338_-ncRNA_intronic
CAediting_1126018chr16_69327343_-ncRNA_intronic
CAediting_1126019chr16_69327344_-ncRNA_intronic
CAediting_1126020chr16_69327345_-ncRNA_intronic
CAediting_1126021chr16_69327346_-ncRNA_intronic
CAediting_1126022chr16_69327347_-ncRNA_intronic
CAediting_1126023chr16_69327350_-ncRNA_intronic
CAediting_1126024chr16_69327361_-ncRNA_intronic
CAediting_1126025chr16_69327362_-ncRNA_intronic
CAediting_1126026chr16_69327363_-ncRNA_intronic
CAediting_1126027chr16_69327369_-ncRNA_intronic
CAediting_1126028chr16_69327371_-ncRNA_intronic
CAediting_1126029chr16_69327384_-ncRNA_intronic
CAediting_1126030chr16_69327386_-ncRNA_intronic
CAediting_1126031chr16_69327387_-ncRNA_intronic
CAediting_1126032chr16_69327392_-ncRNA_intronic
CAediting_1126033chr16_69327395_-ncRNA_intronic
CAediting_1126034chr16_69327400_-ncRNA_intronic
CAediting_1126035chr16_69327405_-ncRNA_intronic
CAediting_1126036chr16_69327410_-ncRNA_intronic
CAediting_1126037chr16_69327414_-ncRNA_intronic
CAediting_1126038chr16_69327418_-ncRNA_intronic
CAediting_1126039chr16_69327419_-ncRNA_intronic
CAediting_1126040chr16_69327424_-ncRNA_intronic
CAediting_1126041chr16_69327432_-ncRNA_intronic
CAediting_1126042chr16_69327435_-ncRNA_intronic
CAediting_1126043chr16_69327440_-ncRNA_intronic
CAediting_1126044chr16_69327441_-ncRNA_intronic
CAediting_1126045chr16_69327449_-ncRNA_intronic
CAediting_1126046chr16_69327463_-ncRNA_intronic
CAediting_1126047chr16_69327735_-ncRNA_intronic
CAediting_1126048chr16_69327767_-ncRNA_intronic
CAediting_1126049chr16_69327768_-ncRNA_intronic
CAediting_1126050chr16_69327791_-ncRNA_intronic
CAediting_1126051chr16_69327795_-ncRNA_intronic
CAediting_1126052chr16_69327808_-ncRNA_intronic
CAediting_1126053chr16_69327809_-ncRNA_intronic
CAediting_1126054chr16_69327820_-ncRNA_intronic
CAediting_1126055chr16_69327832_-ncRNA_intronic
CAediting_1126056chr16_69327843_-ncRNA_intronic
CAediting_1126057chr16_69327845_-ncRNA_intronic
CAediting_1126058chr16_69327847_-ncRNA_intronic
CAediting_1126059chr16_69327852_-ncRNA_intronic
CAediting_1126060chr16_69327978_-ncRNA_intronic
CAediting_1126061chr16_69327982_-ncRNA_intronic
CAediting_1126062chr16_69328006_-ncRNA_intronic
CAediting_1126063chr16_69328011_-ncRNA_intronic
CAediting_1126064chr16_69328016_-ncRNA_intronic
CAediting_1126065chr16_69328025_-ncRNA_intronic
CAediting_1126066chr16_69328027_-ncRNA_intronic
CAediting_1126067chr16_69328032_-ncRNA_intronic
CAediting_1126068chr16_69328038_-ncRNA_intronic
CAediting_1126069chr16_69328041_-ncRNA_intronic
CAediting_1126070chr16_69328045_-ncRNA_intronic
CAediting_1126071chr16_69328046_-ncRNA_intronic
CAediting_1126072chr16_69328051_-ncRNA_intronic
CAediting_1126073chr16_69328054_-ncRNA_intronic
CAediting_1126074chr16_69328059_-ncRNA_intronic
CAediting_1126075chr16_69328063_-ncRNA_intronic
CAediting_1126076chr16_69328064_-ncRNA_intronic
CAediting_1126077chr16_69328069_-ncRNA_intronic
CAediting_1126078chr16_69328085_-ncRNA_intronic
CAediting_1126079chr16_69328086_-ncRNA_intronic
CAediting_1126080chr16_69328092_-ncRNA_intronic
CAediting_1126081chr16_69328095_-ncRNA_intronic
CAediting_1126082chr16_69328112_-ncRNA_intronic
CAediting_1126083chr16_69328115_-ncRNA_intronic
CAediting_1126084chr16_69328116_-ncRNA_intronic
CAediting_1126085chr16_69328117_-ncRNA_intronic
CAediting_1126086chr16_69328118_-ncRNA_intronic
CAediting_1126087chr16_69328121_-ncRNA_intronic
CAediting_1126088chr16_69328125_-ncRNA_intronic
CAediting_1126089chr16_69328126_-ncRNA_intronic
CAediting_1126090chr16_69328130_-ncRNA_intronic
CAediting_1126091chr16_69328141_-ncRNA_intronic
CAediting_1126092chr16_69328151_-ncRNA_intronic
CAediting_1126093chr16_69328152_-ncRNA_intronic
CAediting_1126094chr16_69328164_-ncRNA_intronic
CAediting_1126095chr16_69328166_-ncRNA_intronic
CAediting_1126096chr16_69328167_-ncRNA_intronic
CAediting_1126097chr16_69328175_-ncRNA_intronic
CAediting_1126098chr16_69328213_-ncRNA_intronic
CAediting_1126099chr16_69328219_-ncRNA_intronic
CAediting_1126100chr16_69328227_-ncRNA_intronic
CAediting_1126101chr16_69328241_-ncRNA_intronic
CAediting_1126102chr16_69331565_-intronic
CAediting_1126103chr16_69331773_-intronic
CAediting_1126104chr16_69331774_-intronic
CAediting_1126105chr16_69333223_-intronic
CAediting_1126106chr16_69333239_-intronic
CAediting_1126107chr16_69333259_-intronic
CAediting_1126108chr16_69333264_-intronic
CAediting_1126109chr16_69333272_-intronic
CAediting_1126110chr16_69333282_-intronic
CAediting_1126111chr16_69333283_-intronic
CAediting_1126112chr16_69333295_-intronic
CAediting_1126113chr16_69333299_-intronic
CAediting_1126114chr16_69333305_-intronic
CAediting_1126115chr16_69333313_-intronic
CAediting_1126116chr16_69333320_-intronic
CAediting_1126117chr16_69333327_-intronic
CAediting_1126118chr16_69333331_-intronic
CAediting_1126119chr16_69333336_-intronic
CAediting_1126120chr16_69333347_-intronic
CAediting_1126121chr16_69333368_-intronic
CAediting_1126122chr16_69333424_-intronic
CAediting_1126123chr16_69333432_-intronic
CAediting_1126124chr16_69333449_-intronic
CAediting_1126125chr16_69333457_-intronic
CAediting_1126126chr16_69333744_-intronic
CAediting_1126127chr16_69333745_-intronic
CAediting_1126128chr16_69333754_-intronic
CAediting_1126129chr16_69333771_-intronic
CAediting_1126130chr16_69333784_-intronic
CAediting_1126131chr16_69333785_-intronic
CAediting_1126132chr16_69333786_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1125990chr16_69327174_-SINEAluAluSx1
CAediting_1125991chr16_69327180_-SINEAluAluSx1
CAediting_1125992chr16_69327181_-SINEAluAluSx1
CAediting_1125993chr16_69327197_-SINEAluAluSx1
CAediting_1125994chr16_69327198_-SINEAluAluSx1
CAediting_1125995chr16_69327203_-SINEAluAluSx1
CAediting_1125996chr16_69327233_-SINEAluAluSx1
CAediting_1125997chr16_69327235_-SINEAluAluSx1
CAediting_1125998chr16_69327244_-SINEAluAluSx1
CAediting_1125999chr16_69327251_-SINEAluAluSx1
CAediting_1126000chr16_69327253_-SINEAluAluSx1
CAediting_1126001chr16_69327257_-SINEAluAluSx1
CAediting_1126002chr16_69327264_-SINEAluAluSx1
CAediting_1126003chr16_69327265_-SINEAluAluSx1
CAediting_1126004chr16_69327266_-SINEAluAluSx1
CAediting_1126005chr16_69327273_-SINEAluAluSx1
CAediting_1126006chr16_69327274_-SINEAluAluSx1
CAediting_1126007chr16_69327276_-SINEAluAluSx1
CAediting_1126008chr16_69327289_-SINEAluAluSx1
CAediting_1126009chr16_69327300_-SINEAluAluSx1
CAediting_1126010chr16_69327302_-SINEAluAluSx1
CAediting_1126011chr16_69327305_-SINEAluAluSx1
CAediting_1126012chr16_69327306_-SINEAluAluSx1
CAediting_1126013chr16_69327316_-SINEAluAluSx1
CAediting_1126014chr16_69327332_-SINEAluAluSx1
CAediting_1126015chr16_69327336_-SINEAluAluSx1
CAediting_1126016chr16_69327337_-SINEAluAluSx1
CAediting_1126017chr16_69327338_-SINEAluAluSx1
CAediting_1126018chr16_69327343_-SINEAluAluSx1
CAediting_1126019chr16_69327344_-SINEAluAluSx1
CAediting_1126020chr16_69327345_-SINEAluAluSx1
CAediting_1126021chr16_69327346_-SINEAluAluSx1
CAediting_1126022chr16_69327347_-SINEAluAluSx1
CAediting_1126023chr16_69327350_-SINEAluAluSx1
CAediting_1126024chr16_69327361_-SINEAluAluSx1
CAediting_1126025chr16_69327362_-SINEAluAluSx1
CAediting_1126026chr16_69327363_-SINEAluAluSx1
CAediting_1126027chr16_69327369_-SINEAluAluSx1
CAediting_1126028chr16_69327371_-SINEAluAluSx1
CAediting_1126029chr16_69327384_-SINEAluAluSx1
CAediting_1126030chr16_69327386_-SINEAluAluSx1
CAediting_1126031chr16_69327387_-SINEAluAluSx1
CAediting_1126032chr16_69327392_-SINEAluAluSx1
CAediting_1126033chr16_69327395_-SINEAluAluSx1
CAediting_1126034chr16_69327400_-SINEAluAluSx1
CAediting_1126035chr16_69327405_-SINEAluAluSx1
CAediting_1126036chr16_69327410_-SINEAluAluSx1
CAediting_1126037chr16_69327414_-SINEAluAluSx1
CAediting_1126038chr16_69327418_-SINEAluAluSx1
CAediting_1126039chr16_69327419_-SINEAluAluSx1
CAediting_1126040chr16_69327424_-SINEAluAluSx1
CAediting_1126041chr16_69327432_-SINEAluAluSx1
CAediting_1126042chr16_69327435_-SINEAluAluSx1
CAediting_1126043chr16_69327440_-SINEAluAluSx1
CAediting_1126044chr16_69327441_-SINEAluAluSx1
CAediting_1126045chr16_69327449_-SINEAluAluSx1
CAediting_1126046chr16_69327463_-SINEAluAluSx1
CAediting_1126047chr16_69327735_-SINEAluFLAM_C
CAediting_1126048chr16_69327767_-SINEAluFLAM_C
CAediting_1126049chr16_69327768_-SINEAluFLAM_C
CAediting_1126050chr16_69327791_-SINEAluFLAM_C
CAediting_1126051chr16_69327795_-SINEAluFLAM_C
CAediting_1126052chr16_69327808_-SINEAluFLAM_C
CAediting_1126053chr16_69327809_-SINEAluFLAM_C
CAediting_1126054chr16_69327820_-SINEAluFLAM_C
CAediting_1126055chr16_69327832_-SINEAluFLAM_C
CAediting_1126056chr16_69327843_-SINEAluFLAM_C
CAediting_1126057chr16_69327845_-SINEAluFLAM_C
CAediting_1126058chr16_69327847_-SINEAluFLAM_C
CAediting_1126059chr16_69327852_-SINEAluFLAM_C
CAediting_1126060chr16_69327978_-SINEAluAluSg7
CAediting_1126061chr16_69327982_-SINEAluAluSg7
CAediting_1126062chr16_69328006_-SINEAluAluSg7
CAediting_1126063chr16_69328011_-SINEAluAluSg7
CAediting_1126064chr16_69328016_-SINEAluAluSg7
CAediting_1126065chr16_69328025_-SINEAluAluSg7
CAediting_1126066chr16_69328027_-SINEAluAluSg7
CAediting_1126067chr16_69328032_-SINEAluAluSg7
CAediting_1126068chr16_69328038_-SINEAluAluSg7
CAediting_1126069chr16_69328041_-SINEAluAluSg7
CAediting_1126070chr16_69328045_-SINEAluAluSg7
CAediting_1126071chr16_69328046_-SINEAluAluSg7
CAediting_1126072chr16_69328051_-SINEAluAluSg7
CAediting_1126073chr16_69328054_-SINEAluAluSg7
CAediting_1126074chr16_69328059_-SINEAluAluSg7
CAediting_1126075chr16_69328063_-SINEAluAluSg7
CAediting_1126076chr16_69328064_-SINEAluAluSg7
CAediting_1126077chr16_69328069_-SINEAluAluSg7
CAediting_1126078chr16_69328085_-SINEAluAluSg7
CAediting_1126079chr16_69328086_-SINEAluAluSg7
CAediting_1126080chr16_69328092_-SINEAluAluSg7
CAediting_1126081chr16_69328095_-SINEAluAluSg7
CAediting_1126082chr16_69328112_-SINEAluAluSg7
CAediting_1126083chr16_69328115_-SINEAluAluSg7
CAediting_1126084chr16_69328116_-SINEAluAluSg7
CAediting_1126085chr16_69328117_-SINEAluAluSg7
CAediting_1126086chr16_69328118_-SINEAluAluSg7
CAediting_1126087chr16_69328121_-SINEAluAluSg7
CAediting_1126088chr16_69328125_-SINEAluAluSg7
CAediting_1126089chr16_69328126_-SINEAluAluSg7
CAediting_1126090chr16_69328130_-SINEAluAluSg7
CAediting_1126091chr16_69328141_-SINEAluAluSg7
CAediting_1126092chr16_69328151_-SINEAluAluSg7
CAediting_1126093chr16_69328152_-SINEAluAluSg7
CAediting_1126094chr16_69328164_-SINEAluAluSg7
CAediting_1126095chr16_69328166_-SINEAluAluSg7
CAediting_1126096chr16_69328167_-SINEAluAluSg7
CAediting_1126097chr16_69328175_-SINEAluAluSg7
CAediting_1126098chr16_69328213_-SINEAluAluSg7
CAediting_1126099chr16_69328219_-SINEAluAluSg7
CAediting_1126100chr16_69328227_-SINEAluAluSg7
CAediting_1126101chr16_69328241_-SINEAluAluSg7
CAediting_1126102chr16_69331565_-SINEAluAluSx1
CAediting_1126103chr16_69331773_-SINEAluAluSx1
CAediting_1126104chr16_69331774_-SINEAluAluSx1
CAediting_1126105chr16_69333223_-SINEAluAluJr
CAediting_1126106chr16_69333239_-SINEAluAluJr
CAediting_1126107chr16_69333259_-SINEAluAluJr
CAediting_1126108chr16_69333264_-SINEAluAluJr
CAediting_1126109chr16_69333272_-SINEAluAluJr
CAediting_1126110chr16_69333282_-SINEAluAluJr
CAediting_1126111chr16_69333283_-SINEAluAluJr
CAediting_1126112chr16_69333295_-SINEAluAluJr
CAediting_1126113chr16_69333299_-SINEAluAluJr
CAediting_1126114chr16_69333305_-SINEAluAluJr
CAediting_1126115chr16_69333313_-SINEAluAluJr
CAediting_1126116chr16_69333320_-SINEAluAluJr
CAediting_1126117chr16_69333327_-SINEAluAluJr
CAediting_1126118chr16_69333331_-SINEAluAluJr
CAediting_1126119chr16_69333336_-SINEAluAluJr
CAediting_1126120chr16_69333347_-SINEAluAluJr
CAediting_1126121chr16_69333368_-SINEAluAluJr
CAediting_1126122chr16_69333424_-SINEAluAluJr
CAediting_1126123chr16_69333432_-SINEAluAluJr
CAediting_1126124chr16_69333449_-SINEAluAluJr
CAediting_1126125chr16_69333457_-SINEAluAluJr
CAediting_1126126chr16_69333744_-SINEAluAluJo
CAediting_1126127chr16_69333745_-SINEAluAluJo
CAediting_1126128chr16_69333754_-SINEAluAluJo
CAediting_1126129chr16_69333771_-SINEAluAluJo
CAediting_1126130chr16_69333784_-SINEAluAluJo
CAediting_1126131chr16_69333785_-SINEAluAluJo
CAediting_1126132chr16_69333786_-SINEAluAluJo

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RNA A-to-I editing events in the alternative splicing sites for COG8

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000213380.12.COG8.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000213380.12.COG8.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for COG8

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for COG8

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for COG8

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229414chr17_67471546_+ENSG00000213380.12ENST00000562595hsa-miR-548aa69322178693221847mer-m86932217769322201140-13.18
CAediting_414656chr5_72878640_+ENSG00000213380.12ENST00000562595hsa-miR-4804-3p69323238693232447mer-m86932323769323257157-21.12
CAediting_524911chr7_5495852_-ENSG00000213380.12ENST00000562595hsa-miR-589-3p69322464693224707mer-m86932246369322486140-11.8

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000213380.12ENST00000562595hsa-miR-1304-3p69323145693231517mer-m86932314469323166153-19.3
CAediting_1368054chr19_46709310_-ENSG00000213380.12ENST00000562595hsa-miR-320e69323131693231377mer-m86932313069323147143-12.06
CAediting_980496chr14_31014685_-ENSG00000213380.12ENST00000562595hsa-miR-624-3p69322850693228567mer-m86932284969322868147-15.4

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for COG8

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for COG8

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_1125993chr16_69327197_-..0.004885540752646050.323824799192736..
BRCACAediting_1126004chr16_69327266_-..0.01097091435878660.247323685397519..
LUADCAediting_1126011chr16_69327305_-....0.03630980328192730.209647454760165
SKCMCAediting_1126011chr16_69327305_-0.02012620917495050.2044394310007....
LGGCAediting_1126013chr16_69327316_-....0.0371774953703410.102702353832439
BRCACAediting_1126013chr16_69327316_-..0.02863410192168070.107183535251282..
CESCCAediting_1126013chr16_69327316_-..0.02108723069367690.283466302308587..
PRADCAediting_1126013chr16_69327316_-....0.03984692768876770.140296332165451
THCACAediting_1126013chr16_69327316_-0.01029965243862640.144143221625326....
KIRCCAediting_1126013chr16_69327316_-0.03991605360528850.1201105359668590.002329927988958290.177214842416451..
OVCAediting_1126013chr16_69327316_-....0.0004120537944298670.208579035576267
THYMCAediting_1126013chr16_69327316_-..0.004508913333519860.377366032892462..
LUADCAediting_1126014chr16_69327332_-....0.01117253940729760.333764495032072
KIRPCAediting_1126014chr16_69327332_-..0.003923419133474460.340499887869801..
ESCACAediting_1126014chr16_69327332_-0.04523965649801760.207060166417468....
SKCMCAediting_1126014chr16_69327332_-..0.03808959983376580.257869768506269..
STADCAediting_1126022chr16_69327347_-....0.02420506960535550.236180294287565
BRCACAediting_1126023chr16_69327350_-....0.008229919834271610.299104238704549
THCACAediting_1126023chr16_69327350_-0.00251436182109150.399497311861974....
BRCACAediting_1126046chr16_69327463_-0.03225463080598620.233882269635365....
LGGCAediting_1126059chr16_69327852_-0.003442404319962570.295717566808502....
BRCACAediting_1126059chr16_69327852_-6.95421459364699e-050.228715729639995....
LIHCCAediting_1126059chr16_69327852_-0.0001176483231169970.513201234936718....
KIRCCAediting_1126059chr16_69327852_-0.0002936713088202750.414598607182099....
SKCMCAediting_1126059chr16_69327852_-0.01535371099187040.28276379080521....

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Relation with cancer stages for COG8

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
COADpathologic_stageCAediting_1126011chr16_69327305_-0.0312679312462077-0.229783497276575
ESCAclinical_stageCAediting_1126013chr16_69327316_-0.02307598836659120.324145314986416
KIRPclinical_stageCAediting_1126011chr16_69327305_-0.03709777192119590.215370394142612
KIRPclinical_stageCAediting_1126013chr16_69327316_-0.04497219547289780.160254524475249
KIRPpathologic_stageCAediting_1126013chr16_69327316_-0.01379297947046980.170936687566003
OVclinical_stageCAediting_1126059chr16_69327852_-0.02795495450657970.222092143950583
STADpathologic_stageCAediting_1126004chr16_69327266_-0.04830291236356790.182200221040233
STADpathologic_stageCAediting_1126023chr16_69327350_-0.0319376988449863-0.201074576046934
STADpathologic_stageCAediting_1126046chr16_69327463_-0.0392128357667797-0.235516349923501

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Relation with survival for COG8

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
KIRCCAediting_1126003chr16_69327265_-0.001690632819396190.002061522.00036e+11
OVCAediting_1126022chr16_69327347_-0.008588380633220980.00644146504.24

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RelatedDrugs for COG8

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for COG8

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
COG8C1970021Congenital Disorder Of Glycosylation, Type IIH4CTD_human;GENOMICS_ENGLAND;ORPHANET