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Editing gene: ZNF397 (CAeditome ID:84307)

Gene summary for ZNF397

Gene summary

Gene information	Gene symbol	ZNF397
	Gene ID	84307
	Gene name	zinc finger protein 397
	Synonyms	ZNF47\|ZSCAN15
	Cytomap	18q12.2
	Type of gene	protein-coding
	Description	zinc finger protein 397zinc finger and SCAN domain-containing protein 15zinc finger protein 47
	Modification date	20210518
	UniProtAcc	Q8NF99
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ZNF397	GO:0005730	Zinc finger protein 397	0000052
ZNF397	GO:0005829	Zinc finger protein 397	0000052
ZNF397	GO:0005886	Zinc finger protein 397	0000052
ZNF397	GO:0015630	Zinc finger protein 397	0000052

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RNA A-to-I events for ZNF397

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000186812.11

RNA A-to-I editing events in Cancer.

CAediting_1260708(35245561, +), CAediting_1260709(35245616, +), CAediting_1260710(35245635, +), CAediting_1260711(35245645, +), CAediting_1260712(35245651, +), CAediting_1260713(35245663, +), CAediting_1260714(35245672, +), CAediting_1260715(35245690, +), CAediting_1260716(35245693, +), CAediting_1260717(35245700, +), CAediting_1260718(35245704, +), CAediting_1260719(35245705, +), CAediting_1260720(35245711, +), CAediting_1260721(35245721, +), CAediting_1260722(35245722, +), CAediting_1260723(35245735, +), CAediting_1260724(35245739, +), CAediting_1260725(35245748, +), CAediting_1260726(35245749, +), CAediting_1260727(35245767, +), CAediting_1260728(35245774, +), CAediting_1260729(35245777, +), CAediting_1260730(35245779, +), CAediting_1260731(35245787, +), CAediting_1260732(35245789, +), CAediting_1260733(35245805, +), CAediting_1260734(35245813, +), CAediting_1260735(35245814, +), CAediting_1260736(35245819, +), CAediting_1260737(35245820, +), CAediting_1260738(35245832, +), CAediting_1260739(35245845, +), CAediting_1260740(35245868, +), CAediting_1260741(35245869, +), CAediting_1260742(35245870, +), CAediting_1260743(35245873, +), CAediting_1260744(35245889, +), CAediting_1260745(35245890, +), CAediting_1260746(35245895, +), CAediting_1260747(35245898, +), CAediting_1260748(35245907, +), CAediting_1260749(35245908, +), CAediting_1260750(35245915, +), CAediting_1260751(35245918, +), CAediting_1260752(35245924, +), CAediting_1260753(35245928, +), CAediting_1260754(35245937, +), CAediting_1260755(35245938, +), CAediting_1260756(35245945, +), CAediting_1260757(35245952, +), CAediting_1260758(35245956, +), CAediting_1260759(35245963, +), CAediting_1260760(35245972, +), CAediting_1260761(35245982, +), CAediting_1260762(35245991, +), CAediting_1260763(35245992, +), CAediting_1260764(35245999, +), CAediting_1260765(35246000, +), CAediting_1260766(35246001, +), CAediting_1260767(35246019, +), CAediting_1260768(35246036, +), CAediting_1260769(35246038, +), CAediting_1260770(35246043, +), CAediting_1260771(35246052, +), CAediting_1260772(35246058, +), CAediting_1260773(35246067, +), CAediting_1260774(35246071, +), CAediting_1260775(35246075, +), CAediting_1260776(35246076, +), CAediting_1260777(35246083, +), CAediting_1260778(35246085, +), CAediting_1260779(35246092, +), CAediting_1260780(35246104, +), CAediting_1260781(35246110, +), CAediting_1260782(35246113, +), CAediting_1260783(35246120, +), CAediting_1260784(35246131, +), CAediting_1260785(35246138, +), CAediting_1260786(35246147, +), CAediting_1260787(35246155, +), CAediting_1260788(35246156, +), CAediting_1260789(35246160, +), CAediting_1260790(35246169, +), CAediting_1260791(35246170, +), CAediting_1260792(35246176, +), CAediting_1260793(35246178, +), CAediting_1260794(35246187, +), CAediting_1260795(35246226, +), CAediting_1260796(35246235, +), CAediting_1260797(35246239, +), CAediting_1260798(35246240, +), CAediting_1260799(35246260, +), CAediting_1260800(35247714, +), CAediting_1260801(35247721, +), CAediting_1260802(35247732, +), CAediting_1260803(35247735, +), CAediting_1260804(35247745, +), CAediting_1260805(35247750, +), CAediting_1260806(35247751, +), CAediting_1260807(35247752, +), CAediting_1260808(35247770, +), CAediting_1260809(35247771, +), CAediting_1260810(35247775, +), CAediting_1260811(35247788, +), CAediting_1260812(35247800, +), CAediting_1260813(35247812, +), CAediting_1260814(35247823, +), CAediting_1260815(35247837, +), CAediting_1260816(35247850, +), CAediting_1260817(35247853, +), CAediting_1260818(35247854, +), CAediting_1260819(35247855, +), CAediting_1260820(35247857, +), CAediting_1260821(35247859, +), CAediting_1260822(35247870, +), CAediting_1260823(35247879, +), CAediting_1260824(35247891, +), CAediting_1260825(35247892, +), CAediting_1260826(35247904, +), CAediting_1260827(35247909, +), CAediting_1260828(35247930, +), CAediting_1260829(35247931, +), CAediting_1260830(35247932, +), CAediting_1260831(35247941, +), CAediting_1260832(35247944, +), CAediting_1260833(35247946, +), CAediting_1260834(35247966, +), CAediting_1260835(35248554, +), CAediting_1260836(35248558, +), CAediting_1260837(35248563, +), CAediting_1260838(35248567, +), CAediting_1260839(35248569, +), CAediting_1260840(35248577, +), CAediting_1260841(35248579, +), CAediting_1260842(35248585, +), CAediting_1260843(35248591, +), CAediting_1260844(35248594, +), CAediting_1260845(35248602, +), CAediting_1260846(35248607, +), CAediting_1260847(35248608, +), CAediting_1260848(35248626, +), CAediting_1260849(35248634, +), CAediting_1260850(35248640, +), CAediting_1260851(35248645, +), CAediting_1260852(35248663, +), CAediting_1260853(35248679, +), CAediting_1260854(35248681, +), CAediting_1260855(35248682, +), CAediting_1260856(35248685, +), CAediting_1260857(35248686, +), CAediting_1260858(35248687, +), CAediting_1260859(35248689, +), CAediting_1260860(35248692, +), CAediting_1260861(35248713, +), CAediting_1260862(35248721, +), CAediting_1260863(35248727, +), CAediting_1260864(35248731, +), CAediting_1260865(35248738, +), CAediting_1260866(35248744, +), CAediting_1260867(35248751, +), CAediting_1260868(35248762, +), CAediting_1260869(35248771, +), CAediting_1260870(35248783, +), CAediting_1260871(35248787, +), CAediting_1260872(35248791, +), CAediting_1260873(35248792, +), CAediting_1260874(35248797, +), CAediting_1260875(35248807, +), CAediting_1260876(35248812, +), CAediting_1260877(35248825, +), CAediting_1260878(35248826, +), CAediting_1260879(35248852, +), CAediting_1260880(35248855, +), CAediting_1260881(35249374, +), CAediting_1260882(35249378, +), CAediting_1260883(35249380, +), CAediting_1260884(35249396, +), CAediting_1260885(35249397, +), CAediting_1260886(35249402, +), CAediting_1260887(35249405, +), CAediting_1260888(35249413, +), CAediting_1260889(35249437, +), CAediting_1260890(35249439, +), CAediting_1260891(35249442, +), CAediting_1260892(35249451, +), CAediting_1260893(35249453, +), CAediting_1260894(35249456, +), CAediting_1260895(35249462, +), CAediting_1260896(35249465, +), CAediting_1260897(35249466, +), CAediting_1260898(35249468, +), CAediting_1260899(35249474, +), CAediting_1260900(35249475, +), CAediting_1260901(35249476, +), CAediting_1260902(35249490, +), CAediting_1260903(35249491, +), CAediting_1260904(35249492, +), CAediting_1260905(35249493, +), CAediting_1260906(35249494, +), CAediting_1260907(35249496, +), CAediting_1260908(35249499, +), CAediting_1260909(35249507, +), CAediting_1260910(35249522, +), CAediting_1260911(35249532, +), CAediting_1260912(35249538, +), CAediting_1260913(35249542, +), CAediting_1260914(35249557, +), CAediting_1260915(35249559, +), CAediting_1260916(35249562, +), CAediting_1260917(35249570, +), CAediting_1260918(35249573, +), CAediting_1260919(35249574, +), CAediting_1260920(35249581, +), CAediting_1260921(35249594, +), CAediting_1260922(35249598, +), CAediting_1260923(35249603, +), CAediting_1260924(35249605, +), CAediting_1260925(35249610, +), CAediting_1260926(35249613, +), CAediting_1260927(35249633, +), CAediting_1260928(35249653, +), CAediting_1260929(35249654, +), CAediting_1260930(35249655, +), CAediting_1260931(35249656, +), CAediting_1260932(35249657, +), CAediting_1260933(35249658, +), CAediting_1260934(35249659, +), CAediting_1260935(35249660, +), CAediting_1260936(35249661, +), CAediting_1260937(35249662, +), CAediting_1260938(35249663, +), CAediting_1260939(35249664, +), CAediting_1260940(35249666, +), CAediting_1260941(35249667, +), CAediting_1260942(35249668, +), CAediting_1260943(35249669, +), CAediting_1260944(35249670, +),

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RNA editing positional annotations for ZNF397 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1260713	chr18_35245663_+	nonsynonymous SNV	ENST00000330501.10	c.A958G	p.K320E	D	D	D
CAediting_1260717	chr18_35245700_+	nonsynonymous SNV	ENST00000330501.10	c.A995G	p.Q332R	T	P	D
CAediting_1260720	chr18_35245711_+	nonsynonymous SNV	ENST00000330501.10	c.A1006G	p.S336G	D	P	N
CAediting_1260721	chr18_35245721_+	nonsynonymous SNV	ENST00000330501.10	c.A1016G	p.K339R	T	P	N
CAediting_1260724	chr18_35245739_+	nonsynonymous SNV	ENST00000330501.10	c.A1034G	p.E345G	D	D	D
CAediting_1260725	chr18_35245748_+	nonsynonymous SNV	ENST00000330501.10	c.A1043G	p.K348R	D	P	D
CAediting_1260729	chr18_35245777_+	nonsynonymous SNV	ENST00000330501.10	c.A1072G	p.R358G	T	B	D
CAediting_1260733	chr18_35245805_+	nonsynonymous SNV	ENST00000330501.10	c.A1100G	p.K367R	T	P	N
CAediting_1260738	chr18_35245832_+	nonsynonymous SNV	ENST00000330501.10	c.A1127G	p.K376R	T	P	D
CAediting_1260740	chr18_35245868_+	nonsynonymous SNV	ENST00000330501.10	c.A1163G	p.Q388R	T	D	D
CAediting_1260742	chr18_35245870_+	nonsynonymous SNV	ENST00000330501.10	c.A1165G	p.R389G	D	P	D
CAediting_1260746	chr18_35245895_+	nonsynonymous SNV	ENST00000330501.10	c.A1190G	p.Y397C	D	D	D
CAediting_1260747	chr18_35245898_+	nonsynonymous SNV	ENST00000330501.10	c.A1193G	p.E398G	D	B	D
CAediting_1260748	chr18_35245907_+	nonsynonymous SNV	ENST00000330501.10	c.A1202G	p.E401G	D	D	D
CAediting_1260750	chr18_35245915_+	nonsynonymous SNV	ENST00000330501.10	c.A1210G	p.K404E	D	D	D
CAediting_1260752	chr18_35245924_+	nonsynonymous SNV	ENST00000330501.10	c.A1219G	p.S407G	D	B	D
CAediting_1260756	chr18_35245945_+	nonsynonymous SNV	ENST00000330501.10	c.A1240G	p.R414G	T	P	D
CAediting_1260757	chr18_35245952_+	nonsynonymous SNV	ENST00000330501.10	c.A1247G	p.Q416R	D	P	N
CAediting_1260759	chr18_35245963_+	nonsynonymous SNV	ENST00000330501.10	c.A1258G	p.T420A	D	P	D
CAediting_1260760	chr18_35245972_+	nonsynonymous SNV	ENST00000330501.10	c.A1267G	p.R423G	D	P	D
CAediting_1260761	chr18_35245982_+	nonsynonymous SNV	ENST00000330501.10	c.A1277G	p.E426G	D	B	D
CAediting_1260762	chr18_35245991_+	nonsynonymous SNV	ENST00000330501.10	c.A1286G	p.E429G	D	D	D
CAediting_1260764	chr18_35245999_+	nonsynonymous SNV	ENST00000330501.10	c.A1294G	p.K432E	D	D	D
CAediting_1260765	chr18_35246000_+	nonsynonymous SNV	ENST00000330501.10	c.A1295G	p.K432R	T	D	N
CAediting_1260768	chr18_35246036_+	nonsynonymous SNV	ENST00000330501.10	c.A1331G	p.Q444R	D	D	N
CAediting_1260769	chr18_35246038_+	nonsynonymous SNV	ENST00000330501.10	c.A1333G	p.R445G	D	D	D
CAediting_1260770	chr18_35246043_+	nonsynonymous SNV	ENST00000330501.10	c.A1338G	p.I446M	T	D	N
CAediting_1260775	chr18_35246075_+	nonsynonymous SNV	ENST00000330501.10	c.A1370G	p.E457G	D	D	D
CAediting_1260777	chr18_35246083_+	nonsynonymous SNV	ENST00000330501.10	c.A1378G	p.K460E	D	P	D
CAediting_1260779	chr18_35246092_+	nonsynonymous SNV	ENST00000330501.10	c.A1387G	p.S463G	D	B	N
CAediting_1260782	chr18_35246113_+	nonsynonymous SNV	ENST00000330501.10	c.A1408G	p.R470G	T	B	D
CAediting_1260783	chr18_35246120_+	nonsynonymous SNV	ENST00000330501.10	c.A1415G	p.Q472R	D	P	D
CAediting_1260784	chr18_35246131_+	nonsynonymous SNV	ENST00000330501.10	c.A1426G	p.S476G	D	P	D
CAediting_1260785	chr18_35246138_+	nonsynonymous SNV	ENST00000330501.10	c.A1433G	p.E478G	D	D	D
CAediting_1260786	chr18_35246147_+	nonsynonymous SNV	ENST00000330501.10	c.A1442G	p.Y481C	D	D	D
CAediting_1260796	chr18_35246235_+	nonsynonymous SNV	ENST00000330501.10	c.A1530G	p.I510M	D	D	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1260708	chr18_35245561_+	exonic
CAediting_1260709	chr18_35245616_+	exonic
CAediting_1260710	chr18_35245635_+	exonic
CAediting_1260711	chr18_35245645_+	exonic
CAediting_1260712	chr18_35245651_+	exonic
CAediting_1260713	chr18_35245663_+	exonic
CAediting_1260714	chr18_35245672_+	exonic
CAediting_1260715	chr18_35245690_+	exonic
CAediting_1260716	chr18_35245693_+	exonic
CAediting_1260717	chr18_35245700_+	exonic
CAediting_1260718	chr18_35245704_+	exonic
CAediting_1260719	chr18_35245705_+	exonic
CAediting_1260720	chr18_35245711_+	exonic
CAediting_1260721	chr18_35245721_+	exonic
CAediting_1260722	chr18_35245722_+	exonic
CAediting_1260723	chr18_35245735_+	exonic
CAediting_1260724	chr18_35245739_+	exonic
CAediting_1260725	chr18_35245748_+	exonic
CAediting_1260726	chr18_35245749_+	exonic
CAediting_1260727	chr18_35245767_+	exonic
CAediting_1260728	chr18_35245774_+	exonic
CAediting_1260729	chr18_35245777_+	exonic
CAediting_1260730	chr18_35245779_+	exonic
CAediting_1260731	chr18_35245787_+	exonic
CAediting_1260732	chr18_35245789_+	exonic
CAediting_1260733	chr18_35245805_+	exonic
CAediting_1260734	chr18_35245813_+	exonic
CAediting_1260735	chr18_35245814_+	exonic
CAediting_1260736	chr18_35245819_+	exonic
CAediting_1260737	chr18_35245820_+	exonic
CAediting_1260738	chr18_35245832_+	exonic
CAediting_1260739	chr18_35245845_+	exonic
CAediting_1260740	chr18_35245868_+	exonic
CAediting_1260741	chr18_35245869_+	exonic
CAediting_1260742	chr18_35245870_+	exonic
CAediting_1260743	chr18_35245873_+	exonic
CAediting_1260744	chr18_35245889_+	exonic
CAediting_1260745	chr18_35245890_+	exonic
CAediting_1260746	chr18_35245895_+	exonic
CAediting_1260747	chr18_35245898_+	exonic
CAediting_1260748	chr18_35245907_+	exonic
CAediting_1260749	chr18_35245908_+	exonic
CAediting_1260750	chr18_35245915_+	exonic
CAediting_1260751	chr18_35245918_+	exonic
CAediting_1260752	chr18_35245924_+	exonic
CAediting_1260753	chr18_35245928_+	exonic
CAediting_1260754	chr18_35245937_+	exonic
CAediting_1260755	chr18_35245938_+	exonic
CAediting_1260756	chr18_35245945_+	exonic
CAediting_1260757	chr18_35245952_+	exonic
CAediting_1260758	chr18_35245956_+	exonic
CAediting_1260759	chr18_35245963_+	exonic
CAediting_1260760	chr18_35245972_+	exonic
CAediting_1260761	chr18_35245982_+	exonic
CAediting_1260762	chr18_35245991_+	exonic
CAediting_1260763	chr18_35245992_+	exonic
CAediting_1260764	chr18_35245999_+	exonic
CAediting_1260765	chr18_35246000_+	exonic
CAediting_1260766	chr18_35246001_+	exonic
CAediting_1260767	chr18_35246019_+	exonic
CAediting_1260768	chr18_35246036_+	exonic
CAediting_1260769	chr18_35246038_+	exonic
CAediting_1260770	chr18_35246043_+	exonic
CAediting_1260771	chr18_35246052_+	exonic
CAediting_1260772	chr18_35246058_+	exonic
CAediting_1260773	chr18_35246067_+	exonic
CAediting_1260774	chr18_35246071_+	exonic
CAediting_1260775	chr18_35246075_+	exonic
CAediting_1260776	chr18_35246076_+	exonic
CAediting_1260777	chr18_35246083_+	exonic
CAediting_1260778	chr18_35246085_+	exonic
CAediting_1260779	chr18_35246092_+	exonic
CAediting_1260780	chr18_35246104_+	exonic
CAediting_1260781	chr18_35246110_+	exonic
CAediting_1260782	chr18_35246113_+	exonic
CAediting_1260783	chr18_35246120_+	exonic
CAediting_1260784	chr18_35246131_+	exonic
CAediting_1260785	chr18_35246138_+	exonic
CAediting_1260786	chr18_35246147_+	exonic
CAediting_1260787	chr18_35246155_+	exonic
CAediting_1260788	chr18_35246156_+	exonic
CAediting_1260789	chr18_35246160_+	exonic
CAediting_1260790	chr18_35246169_+	exonic
CAediting_1260791	chr18_35246170_+	exonic
CAediting_1260792	chr18_35246176_+	exonic
CAediting_1260793	chr18_35246178_+	exonic
CAediting_1260794	chr18_35246187_+	exonic
CAediting_1260795	chr18_35246226_+	exonic
CAediting_1260796	chr18_35246235_+	exonic
CAediting_1260797	chr18_35246239_+	exonic
CAediting_1260798	chr18_35246240_+	exonic
CAediting_1260799	chr18_35246260_+	exonic
CAediting_1260800	chr18_35247714_+	ncRNA_intronic
CAediting_1260801	chr18_35247721_+	ncRNA_intronic
CAediting_1260802	chr18_35247732_+	ncRNA_intronic
CAediting_1260803	chr18_35247735_+	ncRNA_intronic
CAediting_1260804	chr18_35247745_+	ncRNA_intronic
CAediting_1260805	chr18_35247750_+	ncRNA_intronic
CAediting_1260806	chr18_35247751_+	ncRNA_intronic
CAediting_1260807	chr18_35247752_+	ncRNA_intronic
CAediting_1260808	chr18_35247770_+	ncRNA_intronic
CAediting_1260809	chr18_35247771_+	ncRNA_intronic
CAediting_1260810	chr18_35247775_+	ncRNA_intronic
CAediting_1260811	chr18_35247788_+	ncRNA_intronic
CAediting_1260812	chr18_35247800_+	ncRNA_intronic
CAediting_1260813	chr18_35247812_+	ncRNA_intronic
CAediting_1260814	chr18_35247823_+	ncRNA_intronic
CAediting_1260815	chr18_35247837_+	ncRNA_intronic
CAediting_1260816	chr18_35247850_+	ncRNA_intronic
CAediting_1260817	chr18_35247853_+	ncRNA_intronic
CAediting_1260818	chr18_35247854_+	ncRNA_intronic
CAediting_1260819	chr18_35247855_+	ncRNA_intronic
CAediting_1260820	chr18_35247857_+	ncRNA_intronic
CAediting_1260821	chr18_35247859_+	ncRNA_intronic
CAediting_1260822	chr18_35247870_+	ncRNA_intronic
CAediting_1260823	chr18_35247879_+	ncRNA_intronic
CAediting_1260824	chr18_35247891_+	ncRNA_intronic
CAediting_1260825	chr18_35247892_+	ncRNA_intronic
CAediting_1260826	chr18_35247904_+	ncRNA_intronic
CAediting_1260827	chr18_35247909_+	ncRNA_intronic
CAediting_1260828	chr18_35247930_+	ncRNA_intronic
CAediting_1260829	chr18_35247931_+	ncRNA_intronic
CAediting_1260830	chr18_35247932_+	ncRNA_intronic
CAediting_1260831	chr18_35247941_+	ncRNA_intronic
CAediting_1260832	chr18_35247944_+	ncRNA_intronic
CAediting_1260833	chr18_35247946_+	ncRNA_intronic
CAediting_1260834	chr18_35247966_+	ncRNA_intronic
CAediting_1260835	chr18_35248554_+	ncRNA_intronic
CAediting_1260836	chr18_35248558_+	ncRNA_intronic
CAediting_1260837	chr18_35248563_+	ncRNA_intronic
CAediting_1260838	chr18_35248567_+	ncRNA_intronic
CAediting_1260839	chr18_35248569_+	ncRNA_intronic
CAediting_1260840	chr18_35248577_+	ncRNA_intronic
CAediting_1260841	chr18_35248579_+	ncRNA_intronic
CAediting_1260842	chr18_35248585_+	ncRNA_intronic
CAediting_1260843	chr18_35248591_+	ncRNA_intronic
CAediting_1260844	chr18_35248594_+	ncRNA_intronic
CAediting_1260845	chr18_35248602_+	ncRNA_intronic
CAediting_1260846	chr18_35248607_+	ncRNA_intronic
CAediting_1260847	chr18_35248608_+	ncRNA_intronic
CAediting_1260848	chr18_35248626_+	ncRNA_intronic
CAediting_1260849	chr18_35248634_+	ncRNA_intronic
CAediting_1260850	chr18_35248640_+	ncRNA_intronic
CAediting_1260851	chr18_35248645_+	ncRNA_intronic
CAediting_1260852	chr18_35248663_+	ncRNA_intronic
CAediting_1260853	chr18_35248679_+	ncRNA_intronic
CAediting_1260854	chr18_35248681_+	ncRNA_intronic
CAediting_1260855	chr18_35248682_+	ncRNA_intronic
CAediting_1260856	chr18_35248685_+	ncRNA_intronic
CAediting_1260857	chr18_35248686_+	ncRNA_intronic
CAediting_1260858	chr18_35248687_+	ncRNA_intronic
CAediting_1260859	chr18_35248689_+	ncRNA_intronic
CAediting_1260860	chr18_35248692_+	ncRNA_intronic
CAediting_1260861	chr18_35248713_+	ncRNA_intronic
CAediting_1260862	chr18_35248721_+	ncRNA_intronic
CAediting_1260863	chr18_35248727_+	ncRNA_intronic
CAediting_1260864	chr18_35248731_+	ncRNA_intronic
CAediting_1260865	chr18_35248738_+	ncRNA_intronic
CAediting_1260866	chr18_35248744_+	ncRNA_intronic
CAediting_1260867	chr18_35248751_+	ncRNA_intronic
CAediting_1260868	chr18_35248762_+	ncRNA_intronic
CAediting_1260869	chr18_35248771_+	ncRNA_intronic
CAediting_1260870	chr18_35248783_+	ncRNA_intronic
CAediting_1260871	chr18_35248787_+	ncRNA_intronic
CAediting_1260872	chr18_35248791_+	ncRNA_intronic
CAediting_1260873	chr18_35248792_+	ncRNA_intronic
CAediting_1260874	chr18_35248797_+	ncRNA_intronic
CAediting_1260875	chr18_35248807_+	ncRNA_intronic
CAediting_1260876	chr18_35248812_+	ncRNA_intronic
CAediting_1260877	chr18_35248825_+	ncRNA_intronic
CAediting_1260878	chr18_35248826_+	ncRNA_intronic
CAediting_1260879	chr18_35248852_+	ncRNA_intronic
CAediting_1260880	chr18_35248855_+	ncRNA_intronic
CAediting_1260881	chr18_35249374_+	ncRNA_intronic
CAediting_1260882	chr18_35249378_+	ncRNA_intronic
CAediting_1260883	chr18_35249380_+	ncRNA_intronic
CAediting_1260884	chr18_35249396_+	ncRNA_intronic
CAediting_1260885	chr18_35249397_+	ncRNA_intronic
CAediting_1260886	chr18_35249402_+	ncRNA_intronic
CAediting_1260887	chr18_35249405_+	ncRNA_intronic
CAediting_1260888	chr18_35249413_+	ncRNA_intronic
CAediting_1260889	chr18_35249437_+	ncRNA_intronic
CAediting_1260890	chr18_35249439_+	ncRNA_intronic
CAediting_1260891	chr18_35249442_+	ncRNA_intronic
CAediting_1260892	chr18_35249451_+	ncRNA_intronic
CAediting_1260893	chr18_35249453_+	ncRNA_intronic
CAediting_1260894	chr18_35249456_+	ncRNA_intronic
CAediting_1260895	chr18_35249462_+	ncRNA_intronic
CAediting_1260896	chr18_35249465_+	ncRNA_intronic
CAediting_1260897	chr18_35249466_+	ncRNA_intronic
CAediting_1260898	chr18_35249468_+	ncRNA_intronic
CAediting_1260899	chr18_35249474_+	ncRNA_intronic
CAediting_1260900	chr18_35249475_+	ncRNA_intronic
CAediting_1260901	chr18_35249476_+	ncRNA_intronic
CAediting_1260902	chr18_35249490_+	ncRNA_intronic
CAediting_1260903	chr18_35249491_+	ncRNA_intronic
CAediting_1260904	chr18_35249492_+	ncRNA_intronic
CAediting_1260905	chr18_35249493_+	ncRNA_intronic
CAediting_1260906	chr18_35249494_+	ncRNA_intronic
CAediting_1260907	chr18_35249496_+	ncRNA_intronic
CAediting_1260908	chr18_35249499_+	ncRNA_intronic
CAediting_1260909	chr18_35249507_+	ncRNA_intronic
CAediting_1260910	chr18_35249522_+	ncRNA_intronic
CAediting_1260911	chr18_35249532_+	ncRNA_intronic
CAediting_1260912	chr18_35249538_+	ncRNA_intronic
CAediting_1260913	chr18_35249542_+	ncRNA_intronic
CAediting_1260914	chr18_35249557_+	ncRNA_intronic
CAediting_1260915	chr18_35249559_+	ncRNA_intronic
CAediting_1260916	chr18_35249562_+	ncRNA_intronic
CAediting_1260917	chr18_35249570_+	ncRNA_intronic
CAediting_1260918	chr18_35249573_+	ncRNA_intronic
CAediting_1260919	chr18_35249574_+	ncRNA_intronic
CAediting_1260920	chr18_35249581_+	ncRNA_intronic
CAediting_1260921	chr18_35249594_+	ncRNA_intronic
CAediting_1260922	chr18_35249598_+	ncRNA_intronic
CAediting_1260923	chr18_35249603_+	ncRNA_intronic
CAediting_1260924	chr18_35249605_+	ncRNA_intronic
CAediting_1260925	chr18_35249610_+	ncRNA_intronic
CAediting_1260926	chr18_35249613_+	ncRNA_intronic
CAediting_1260927	chr18_35249633_+	ncRNA_intronic
CAediting_1260928	chr18_35249653_+	ncRNA_intronic
CAediting_1260929	chr18_35249654_+	ncRNA_intronic
CAediting_1260930	chr18_35249655_+	ncRNA_intronic
CAediting_1260931	chr18_35249656_+	ncRNA_intronic
CAediting_1260932	chr18_35249657_+	ncRNA_intronic
CAediting_1260933	chr18_35249658_+	ncRNA_intronic
CAediting_1260934	chr18_35249659_+	ncRNA_intronic
CAediting_1260935	chr18_35249660_+	ncRNA_intronic
CAediting_1260936	chr18_35249661_+	ncRNA_intronic
CAediting_1260937	chr18_35249662_+	ncRNA_intronic
CAediting_1260938	chr18_35249663_+	ncRNA_intronic
CAediting_1260939	chr18_35249664_+	ncRNA_intronic
CAediting_1260940	chr18_35249666_+	ncRNA_intronic
CAediting_1260941	chr18_35249667_+	ncRNA_intronic
CAediting_1260942	chr18_35249668_+	ncRNA_intronic
CAediting_1260943	chr18_35249669_+	ncRNA_intronic
CAediting_1260944	chr18_35249670_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1260800	chr18_35247714_+	SINE	Alu	AluSp
CAediting_1260801	chr18_35247721_+	SINE	Alu	AluSp
CAediting_1260802	chr18_35247732_+	SINE	Alu	AluSp
CAediting_1260803	chr18_35247735_+	SINE	Alu	AluSp
CAediting_1260804	chr18_35247745_+	SINE	Alu	AluSp
CAediting_1260805	chr18_35247750_+	SINE	Alu	AluSp
CAediting_1260806	chr18_35247751_+	SINE	Alu	AluSp
CAediting_1260807	chr18_35247752_+	SINE	Alu	AluSp
CAediting_1260808	chr18_35247770_+	SINE	Alu	AluSp
CAediting_1260809	chr18_35247771_+	SINE	Alu	AluSp
CAediting_1260810	chr18_35247775_+	SINE	Alu	AluSp
CAediting_1260811	chr18_35247788_+	SINE	Alu	AluSp
CAediting_1260812	chr18_35247800_+	SINE	Alu	AluSp
CAediting_1260813	chr18_35247812_+	SINE	Alu	AluSp
CAediting_1260814	chr18_35247823_+	SINE	Alu	AluSp
CAediting_1260815	chr18_35247837_+	SINE	Alu	AluSp
CAediting_1260816	chr18_35247850_+	SINE	Alu	AluSp
CAediting_1260817	chr18_35247853_+	SINE	Alu	AluSp
CAediting_1260818	chr18_35247854_+	SINE	Alu	AluSp
CAediting_1260819	chr18_35247855_+	SINE	Alu	AluSp
CAediting_1260820	chr18_35247857_+	SINE	Alu	AluSp
CAediting_1260821	chr18_35247859_+	SINE	Alu	AluSp
CAediting_1260822	chr18_35247870_+	SINE	Alu	AluSp
CAediting_1260823	chr18_35247879_+	SINE	Alu	AluSp
CAediting_1260824	chr18_35247891_+	SINE	Alu	AluSp
CAediting_1260825	chr18_35247892_+	SINE	Alu	AluSp
CAediting_1260826	chr18_35247904_+	SINE	Alu	AluSp
CAediting_1260827	chr18_35247909_+	SINE	Alu	AluSp
CAediting_1260828	chr18_35247930_+	SINE	Alu	AluSp
CAediting_1260829	chr18_35247931_+	SINE	Alu	AluSp
CAediting_1260830	chr18_35247932_+	SINE	Alu	AluSp
CAediting_1260831	chr18_35247941_+	SINE	Alu	AluSp
CAediting_1260832	chr18_35247944_+	SINE	Alu	AluSp
CAediting_1260833	chr18_35247946_+	SINE	Alu	AluSp
CAediting_1260834	chr18_35247966_+	SINE	Alu	AluSp
CAediting_1260837	chr18_35248563_+	SINE	Alu	AluJr
CAediting_1260838	chr18_35248567_+	SINE	Alu	AluJr
CAediting_1260839	chr18_35248569_+	SINE	Alu	AluJr
CAediting_1260840	chr18_35248577_+	SINE	Alu	AluJr
CAediting_1260841	chr18_35248579_+	SINE	Alu	AluJr
CAediting_1260842	chr18_35248585_+	SINE	Alu	AluJr
CAediting_1260843	chr18_35248591_+	SINE	Alu	AluJr
CAediting_1260844	chr18_35248594_+	SINE	Alu	AluJr
CAediting_1260845	chr18_35248602_+	SINE	Alu	AluJr
CAediting_1260846	chr18_35248607_+	SINE	Alu	AluJr
CAediting_1260847	chr18_35248608_+	SINE	Alu	AluJr
CAediting_1260848	chr18_35248626_+	SINE	Alu	AluJr
CAediting_1260849	chr18_35248634_+	SINE	Alu	AluJr
CAediting_1260850	chr18_35248640_+	SINE	Alu	AluJr
CAediting_1260851	chr18_35248645_+	SINE	Alu	AluJr
CAediting_1260852	chr18_35248663_+	SINE	Alu	AluJr
CAediting_1260853	chr18_35248679_+	SINE	Alu	AluJr
CAediting_1260854	chr18_35248681_+	SINE	Alu	AluJr
CAediting_1260855	chr18_35248682_+	SINE	Alu	AluJr
CAediting_1260856	chr18_35248685_+	SINE	Alu	AluJr
CAediting_1260857	chr18_35248686_+	SINE	Alu	AluJr
CAediting_1260858	chr18_35248687_+	SINE	Alu	AluJr
CAediting_1260859	chr18_35248689_+	SINE	Alu	AluJr
CAediting_1260860	chr18_35248692_+	SINE	Alu	AluJr
CAediting_1260861	chr18_35248713_+	SINE	Alu	AluJr
CAediting_1260862	chr18_35248721_+	SINE	Alu	AluJr
CAediting_1260863	chr18_35248727_+	SINE	Alu	AluJr
CAediting_1260864	chr18_35248731_+	SINE	Alu	AluJr
CAediting_1260865	chr18_35248738_+	SINE	Alu	AluJr
CAediting_1260866	chr18_35248744_+	SINE	Alu	AluJr
CAediting_1260867	chr18_35248751_+	SINE	Alu	AluJr
CAediting_1260868	chr18_35248762_+	SINE	Alu	AluJr
CAediting_1260869	chr18_35248771_+	SINE	Alu	AluJr
CAediting_1260870	chr18_35248783_+	SINE	Alu	AluJr
CAediting_1260871	chr18_35248787_+	SINE	Alu	AluJr
CAediting_1260872	chr18_35248791_+	SINE	Alu	AluJr
CAediting_1260873	chr18_35248792_+	SINE	Alu	AluJr
CAediting_1260874	chr18_35248797_+	SINE	Alu	AluJr
CAediting_1260875	chr18_35248807_+	SINE	Alu	AluJr
CAediting_1260876	chr18_35248812_+	SINE	Alu	AluJr
CAediting_1260877	chr18_35248825_+	SINE	Alu	AluJr
CAediting_1260878	chr18_35248826_+	SINE	Alu	AluJr
CAediting_1260879	chr18_35248852_+	SINE	Alu	AluJr
CAediting_1260880	chr18_35248855_+	SINE	Alu	AluJr
CAediting_1260881	chr18_35249374_+	SINE	Alu	AluSx
CAediting_1260882	chr18_35249378_+	SINE	Alu	AluSx
CAediting_1260883	chr18_35249380_+	SINE	Alu	AluSx
CAediting_1260884	chr18_35249396_+	SINE	Alu	AluSx
CAediting_1260885	chr18_35249397_+	SINE	Alu	AluSx
CAediting_1260886	chr18_35249402_+	SINE	Alu	AluSx
CAediting_1260887	chr18_35249405_+	SINE	Alu	AluSx
CAediting_1260888	chr18_35249413_+	SINE	Alu	AluSx
CAediting_1260889	chr18_35249437_+	SINE	Alu	AluSx
CAediting_1260890	chr18_35249439_+	SINE	Alu	AluSx
CAediting_1260891	chr18_35249442_+	SINE	Alu	AluSx
CAediting_1260892	chr18_35249451_+	SINE	Alu	AluSx
CAediting_1260893	chr18_35249453_+	SINE	Alu	AluSx
CAediting_1260894	chr18_35249456_+	SINE	Alu	AluSx
CAediting_1260895	chr18_35249462_+	SINE	Alu	AluSx
CAediting_1260896	chr18_35249465_+	SINE	Alu	AluSx
CAediting_1260897	chr18_35249466_+	SINE	Alu	AluSx
CAediting_1260898	chr18_35249468_+	SINE	Alu	AluSx
CAediting_1260899	chr18_35249474_+	SINE	Alu	AluSx
CAediting_1260900	chr18_35249475_+	SINE	Alu	AluSx
CAediting_1260901	chr18_35249476_+	SINE	Alu	AluSx
CAediting_1260902	chr18_35249490_+	SINE	Alu	AluSx
CAediting_1260903	chr18_35249491_+	SINE	Alu	AluSx
CAediting_1260904	chr18_35249492_+	SINE	Alu	AluSx
CAediting_1260905	chr18_35249493_+	SINE	Alu	AluSx
CAediting_1260906	chr18_35249494_+	SINE	Alu	AluSx
CAediting_1260907	chr18_35249496_+	SINE	Alu	AluSx
CAediting_1260908	chr18_35249499_+	SINE	Alu	AluSx
CAediting_1260909	chr18_35249507_+	SINE	Alu	AluSx
CAediting_1260910	chr18_35249522_+	SINE	Alu	AluSx
CAediting_1260911	chr18_35249532_+	SINE	Alu	AluSx
CAediting_1260912	chr18_35249538_+	SINE	Alu	AluSx
CAediting_1260913	chr18_35249542_+	SINE	Alu	AluSx
CAediting_1260914	chr18_35249557_+	SINE	Alu	AluSx
CAediting_1260915	chr18_35249559_+	SINE	Alu	AluSx
CAediting_1260916	chr18_35249562_+	SINE	Alu	AluSx
CAediting_1260917	chr18_35249570_+	SINE	Alu	AluSx
CAediting_1260918	chr18_35249573_+	SINE	Alu	AluSx
CAediting_1260919	chr18_35249574_+	SINE	Alu	AluSx
CAediting_1260920	chr18_35249581_+	SINE	Alu	AluSx
CAediting_1260921	chr18_35249594_+	SINE	Alu	AluSx
CAediting_1260922	chr18_35249598_+	SINE	Alu	AluSx
CAediting_1260923	chr18_35249603_+	SINE	Alu	AluSx
CAediting_1260924	chr18_35249605_+	SINE	Alu	AluSx
CAediting_1260925	chr18_35249610_+	SINE	Alu	AluSx
CAediting_1260926	chr18_35249613_+	SINE	Alu	AluSx
CAediting_1260927	chr18_35249633_+	SINE	Alu	AluSx
CAediting_1260928	chr18_35249653_+	SINE	Alu	AluSx
CAediting_1260929	chr18_35249654_+	SINE	Alu	AluSx
CAediting_1260930	chr18_35249655_+	SINE	Alu	AluSx
CAediting_1260931	chr18_35249656_+	SINE	Alu	AluSx
CAediting_1260932	chr18_35249657_+	SINE	Alu	AluSx
CAediting_1260933	chr18_35249658_+	SINE	Alu	AluSx
CAediting_1260934	chr18_35249659_+	SINE	Alu	AluSx
CAediting_1260935	chr18_35249660_+	SINE	Alu	AluSx
CAediting_1260936	chr18_35249661_+	SINE	Alu	AluSx
CAediting_1260937	chr18_35249662_+	SINE	Alu	AluSx
CAediting_1260938	chr18_35249663_+	SINE	Alu	AluSx
CAediting_1260939	chr18_35249664_+	SINE	Alu	AluSx
CAediting_1260940	chr18_35249666_+	SINE	Alu	AluSx
CAediting_1260941	chr18_35249667_+	SINE	Alu	AluSx
CAediting_1260942	chr18_35249668_+	SINE	Alu	AluSx
CAediting_1260943	chr18_35249669_+	SINE	Alu	AluSx
CAediting_1260944	chr18_35249670_+	SINE	Alu	AluSx

Top

RNA A-to-I editing events in the alternative splicing sites for ZNF397

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000186812.11.ZNF397.

Correlation between RNA A-to-I editing and PSI for ENSG00000186812.11.ZNF397.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF397

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

COAD.CAediting_1260802.ENSG00000186812.ZNF397.png
Soverview

COAD.CAediting_1260812.ENSG00000186812.ZNF397.png
Soverview

OV.CAediting_1260836.ENSG00000186812.ZNF397.png
Soverview

PCPG.CAediting_1260826.ENSG00000186812.ZNF397.png
Soverview

TGCT.CAediting_1260826.ENSG00000186812.ZNF397.png
Soverview

TGCT.CAediting_1260830.ENSG00000186812.ZNF397.png
Soverview

Top

Protein coding region RNA A-to-I editings for ZNF397

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ZNF397

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442554	chr5_154685830_+	ENSG00000186812.11	ENST00000261333	hsa-miR-1303	35258096	35258102	7mer-m8	35258083	35258103	144	-15.6
CAediting_1229413	chr17_67471544_+	ENSG00000186812.11	ENST00000355632	hsa-miR-548aa	35259152	35259158	7mer-m8	35259135	35259159	158	-16.09
CAediting_442554	chr5_154685830_+	ENSG00000186812.11	ENST00000355632	hsa-miR-1303	35258096	35258102	7mer-m8	35258083	35258103	144	-15.6
CAediting_442554	chr5_154685830_+	ENSG00000186812.11	ENST00000592264	hsa-miR-1303	35258096	35258102	7mer-m8	35258083	35258103	144	-15.6

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF397

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ZNF397

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_1260802	chr18_35247732_+	.	.	0.000547785905865795	0.313451052417595	.	.
BRCA	CAediting_1260802	chr18_35247732_+	0.023646778919064	0.0951079927585226	.	.	.	.
LUAD	CAediting_1260802	chr18_35247732_+	0.00520566202145479	0.258914194355796	.	.	.	.
LUSC	CAediting_1260802	chr18_35247732_+	.	.	0.00122325999473904	0.337400300728266	0.0354233714896744	0.223301985685941
UCEC	CAediting_1260802	chr18_35247732_+	.	.	.	.	0.000385331104592444	0.389696944286721
SARC	CAediting_1260802	chr18_35247732_+	0.01329818019784	0.255887681213857	.	.	.	.
BLCA	CAediting_1260808	chr18_35247770_+	0.0155442925255854	0.333940422643088	.	.	.	.
BRCA	CAediting_1260808	chr18_35247770_+	1.78435969639574e-06	0.25864216778341	.	.	.	.
BLCA	CAediting_1260809	chr18_35247771_+	0.00247194759925809	0.284544628833343	.	.	.	.
BRCA	CAediting_1260809	chr18_35247771_+	1.67774005332121e-11	0.28408837204007	.	.	.	.
LUSC	CAediting_1260809	chr18_35247771_+	0.00396973529442397	0.312945218507834	.	.	.	.
TGCT	CAediting_1260809	chr18_35247771_+	0.000289746615181725	0.339137816483411	.	.	.	.
THYM	CAediting_1260809	chr18_35247771_+	0.00028624867373869	0.409964379579267	.	.	0.0206690675420107	0.268603326757913
BLCA	CAediting_1260812	chr18_35247800_+	0.0279263704139464	0.17437598596533	.	.	.	.
BRCA	CAediting_1260812	chr18_35247800_+	1.45688628364204e-05	0.164565453126671	.	.	.	.
BRCA	CAediting_1260821	chr18_35247859_+	3.26342914165716e-05	0.167356626198307	.	.	.	.
KIRP	CAediting_1260821	chr18_35247859_+	0.0349960951506718	0.212178156325533	.	.	.	.
OV	CAediting_1260821	chr18_35247859_+	0.0446571280510513	0.143962237322807	.	.	.	.
BLCA	CAediting_1260826	chr18_35247904_+	0.00608739953582381	0.293538485017058	.	.	.	.
BRCA	CAediting_1260826	chr18_35247904_+	8.47071503433079e-15	0.365688320526166	.	.	.	.
PRAD	CAediting_1260826	chr18_35247904_+	0.00696292012067417	0.213229316163986	.	.	0.00389348227538086	0.227708807883639
UCEC	CAediting_1260826	chr18_35247904_+	2.34965777821527e-05	0.407441799597885	.	.	.	.
OV	CAediting_1260826	chr18_35247904_+	0.00034900732377705	0.283599760973133	.	.	.	.
PCPG	CAediting_1260826	chr18_35247904_+	1.07038709093648e-05	0.564474621664832	.	.	.	.
SKCM	CAediting_1260826	chr18_35247904_+	0.000445146052083896	0.379049918395722	.	.	.	.
TGCT	CAediting_1260826	chr18_35247904_+	6.23221752899285e-10	0.600503662448563	.	.	.	.
THYM	CAediting_1260826	chr18_35247904_+	0.000158986547032075	0.419954766953294	.	.	0.000759128790883383	0.378076501699937
BRCA	CAediting_1260829	chr18_35247931_+	8.3360240832827e-07	0.34338768661621	.	.	.	.
BLCA	CAediting_1260830	chr18_35247932_+	4.93455061659126e-06	0.494170009409475	.	.	.	.
LGG	CAediting_1260830	chr18_35247932_+	0.00214218759046614	0.293644263298573	.	.	.	.
BRCA	CAediting_1260830	chr18_35247932_+	1.8653421658185e-25	0.471457515474476	.	.	.	.
CESC	CAediting_1260830	chr18_35247932_+	0.000583827642456355	0.456889096001701	.	.	.	.
LUSC	CAediting_1260830	chr18_35247932_+	0.0125177290664489	0.337680750894401	.	.	.	.
PRAD	CAediting_1260830	chr18_35247932_+	5.24487087247337e-08	0.420171291967378	.	.	.	.
THCA	CAediting_1260830	chr18_35247932_+	0.000811406193232806	0.308020256722039	.	.	.	.
UCEC	CAediting_1260830	chr18_35247932_+	0.00349298503405673	0.286626764179454	.	.	.	.
PCPG	CAediting_1260830	chr18_35247932_+	0.0408476026017702	0.219745518275288	.	.	.	.
SKCM	CAediting_1260830	chr18_35247932_+	0.00255352567516966	0.343469363249905	.	.	.	.
SARC	CAediting_1260830	chr18_35247932_+	0.00974601489849598	0.315996378627368	.	.	.	.
TGCT	CAediting_1260830	chr18_35247932_+	2.28779358567984e-06	0.514886654727657	.	.	.	.
THYM	CAediting_1260830	chr18_35247932_+	5.51473030802159e-05	0.538354665434976	.	.	.	.
BLCA	CAediting_1260841	chr18_35248579_+	1.06398041945612e-11	0.385312909042726	.	.	.	.
LGG	CAediting_1260841	chr18_35248579_+	0.000664192738247277	0.15097870782056	.	.	.	.
BRCA	CAediting_1260841	chr18_35248579_+	7.8768238602216e-49	0.43533169921656	.	.	.	.
LIHC	CAediting_1260841	chr18_35248579_+	0.000281495509471046	0.245318472108465	.	.	.	.
CESC	CAediting_1260841	chr18_35248579_+	6.41100655503643e-12	0.426976241459196	.	.	.	.
LUAD	CAediting_1260841	chr18_35248579_+	1.18733437750329e-08	0.276899678052355	.	.	.	.
COAD	CAediting_1260841	chr18_35248579_+	0.00302082630639568	0.200888794100218	.	.	.	.
LUSC	CAediting_1260841	chr18_35248579_+	1.44663481317563e-10	0.316837181705202	.	.	.	.
GBM	CAediting_1260841	chr18_35248579_+	0.00056999075976541	0.293801964184495	.	.	.	.
PRAD	CAediting_1260841	chr18_35248579_+	2.17278140075286e-12	0.331933132172686	.	.	.	.
STAD	CAediting_1260841	chr18_35248579_+	3.54704246580244e-07	0.277515583623136	.	.	.	.
KICH	CAediting_1260841	chr18_35248579_+	0.0109875399240303	0.34042082104747	.	.	.	.
THCA	CAediting_1260841	chr18_35248579_+	7.26139094192367e-08	0.245989102703393	.	.	.	.
KIRC	CAediting_1260841	chr18_35248579_+	0.00341617934902342	0.137126285289917	.	.	.	.
UCEC	CAediting_1260841	chr18_35248579_+	1.86777551781585e-06	0.259303680195676	.	.	.	.
KIRP	CAediting_1260841	chr18_35248579_+	0.00117467378986497	0.217880592387901	.	.	.	.
ACC	CAediting_1260841	chr18_35248579_+	0.00672754306310528	0.343465955330557	.	.	.	.
ESCA	CAediting_1260841	chr18_35248579_+	0.0236110065021854	0.182343749863427	.	.	.	.
OV	CAediting_1260841	chr18_35248579_+	1.12311488523956e-06	0.264629279334264	.	.	.	.
PAAD	CAediting_1260841	chr18_35248579_+	0.0157077456487576	0.214824148651248	.	.	.	.
PCPG	CAediting_1260841	chr18_35248579_+	5.01988769409705e-08	0.413414958388384	0.0143083499207109	0.192730262062751	.	.
SKCM	CAediting_1260841	chr18_35248579_+	6.08645267068442e-13	0.377264664940106	.	.	.	.
MESO	CAediting_1260841	chr18_35248579_+	0.0179969212706974	0.278140505700671	.	.	.	.
SARC	CAediting_1260841	chr18_35248579_+	3.96421342151734e-08	0.394318039073404	.	.	.	.
TGCT	CAediting_1260841	chr18_35248579_+	1.06987542746121e-09	0.489918517878551	.	.	.	.
THYM	CAediting_1260841	chr18_35248579_+	6.62640349423344e-05	0.391775652623764	.	.	.	.
BLCA	CAediting_1260862	chr18_35248721_+	.	.	0.0228888869494429	0.315099918222567	.	.
PRAD	CAediting_1260862	chr18_35248721_+	.	.	0.0465314464959663	0.172282544792462	.	.
UCEC	CAediting_1260862	chr18_35248721_+	.	.	.	.	0.0312766046791585	0.296200548015819
BLCA	CAediting_1260869	chr18_35248771_+	0.0123800777099172	0.24447623549944	.	.	.	.
LGG	CAediting_1260869	chr18_35248771_+	0.000564588017409987	0.248513143487465	.	.	.	.
BRCA	CAediting_1260869	chr18_35248771_+	1.55435229895989e-18	0.352286914543858	.	.	.	.
LIHC	CAediting_1260869	chr18_35248771_+	0.000804154179657282	0.285080683158672	.	.	.	.
CESC	CAediting_1260869	chr18_35248771_+	0.0127369004545142	0.27911892852304	.	.	.	.
LUAD	CAediting_1260869	chr18_35248771_+	0.000407443334699346	0.24641937709342	.	.	.	.
STAD	CAediting_1260869	chr18_35248771_+	0.011754825241823	0.229317324149242	.	.	.	.
THCA	CAediting_1260869	chr18_35248771_+	0.000313611890446462	0.287529928859623	.	.	.	.
KIRP	CAediting_1260869	chr18_35248771_+	0.0456305629021104	0.261271913427541	.	.	.	.
PCPG	CAediting_1260869	chr18_35248771_+	0.00514271267059336	0.255991330692055	.	.	.	.
SARC	CAediting_1260869	chr18_35248771_+	0.0128517598924459	0.28990221001428	.	.	.	.
SKCM	CAediting_1260870	chr18_35248783_+	.	.	0.00775013616774376	0.346286588834651	.	.
BRCA	CAediting_1260881	chr18_35249374_+	0.014853978621795	0.326888691408758	.	.	.	.
LGG	CAediting_1260891	chr18_35249442_+	0.00276277865023105	0.396026686486297	.	.	.	.
BRCA	CAediting_1260891	chr18_35249442_+	0.00377637832439747	0.167016663019207	.	.	.	.
THCA	CAediting_1260891	chr18_35249442_+	0.0150889199526354	0.256897151196061	.	.	.	.
SKCM	CAediting_1260891	chr18_35249442_+	.	.	1.01694013043729e-06	0.52378201420936	.	.
PRAD	CAediting_1260894	chr18_35249456_+	.	.	0.0192704299451887	0.243631144016262	.	.
PRAD	CAediting_1260901	chr18_35249476_+	.	.	0.000175396518577788	0.425427622768674	.	.
BLCA	CAediting_1260911	chr18_35249532_+	3.59747458675766e-08	0.500006552598466	.	.	.	.
LGG	CAediting_1260911	chr18_35249532_+	0.000318438613115239	0.263202234646547	0.0393299944916012	0.152485488009031	.	.
BRCA	CAediting_1260911	chr18_35249532_+	1.00740905362397e-05	0.190668640635229	0.0201766809416122	0.100982574528578	.	.
PRAD	CAediting_1260911	chr18_35249532_+	0.000587491749515377	0.246485465706008	.	.	.	.
BLCA	CAediting_1260913	chr18_35249542_+	0.000903377350142157	0.396206266397783	0.00131656802220977	0.384482543228733	0.046669603531348	0.243935795637472
LGG	CAediting_1260913	chr18_35249542_+	0.0204305012563777	0.171282295343749	0.0298742735448991	0.160597543701255	.	.
BRCA	CAediting_1260913	chr18_35249542_+	0.0118272244904504	0.124672111252156	.	.	.	.
STAD	CAediting_1260913	chr18_35249542_+	0.0247555718165296	0.204074004163252	.	.	.	.
SARC	CAediting_1260913	chr18_35249542_+	0.0165702582747049	0.281572772905776	.	.	.	.
BRCA	CAediting_1260921	chr18_35249594_+	0.0400747003621654	0.0714059033746888	.	.	.	.
STAD	CAediting_1260921	chr18_35249594_+	0.0410959817811591	0.135991342512721	.	.	.	.
PCPG	CAediting_1260921	chr18_35249594_+	0.0459037098790564	0.152881882588072	.	.	.	.
SKCM	CAediting_1260921	chr18_35249594_+	0.0222407044698947	0.139621718150921	.	.	.	.
UCS	CAediting_1260921	chr18_35249594_+	0.0350863717566971	0.295784046571589	.	.	.	.
BLCA	CAediting_1260922	chr18_35249598_+	0.0434827395311148	0.242078363870312	.	.	.	.
BRCA	CAediting_1260922	chr18_35249598_+	6.52115942984505e-05	0.227327445534759	.	.	.	.
PRAD	CAediting_1260922	chr18_35249598_+	0.00142483364788169	0.307377938415494	.	.	.	.
THCA	CAediting_1260922	chr18_35249598_+	0.00107626682776158	0.26794721194016	.	.	.	.
KIRC	CAediting_1260922	chr18_35249598_+	.	.	.	.	0.0462613570217276	0.226379039963074
BLCA	CAediting_1260925	chr18_35249610_+	0.0218632990285006	0.30865119765294	0.00896524934916549	0.349237487612313	.	.
LGG	CAediting_1260925	chr18_35249610_+	0.0232939161603051	0.193752660083142	.	.	.	.
BRCA	CAediting_1260925	chr18_35249610_+	0.00180396995968451	0.180056616002878	.	.	.	.
THCA	CAediting_1260925	chr18_35249610_+	0.000221364116802808	0.304167883691171	.	.	.	.
UCEC	CAediting_1260925	chr18_35249610_+	0.00482103483718425	0.185662317646996	.	.	.	.

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Relation with cancer stages for ZNF397

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1260802	chr18_35247732_+	0.0153391470845955	0.223678076775648
BLCA	pathologic_stage	CAediting_1260808	chr18_35247770_+	0.0365428004232505	0.293568232401199
BLCA	pathologic_stage	CAediting_1260821	chr18_35247859_+	0.022484932009587	0.205662827376378
BLCA	pathologic_stage	CAediting_1260826	chr18_35247904_+	0.02108611086671	0.249885477518863
BRCA	pathologic_stage	CAediting_1260841	chr18_35248579_+	0.0124890203785576	0.0786558113709348
ESCA	clinical_stage	CAediting_1260925	chr18_35249610_+	0.0349243406766825	-0.322508390942303
ESCA	pathologic_stage	CAediting_1260911	chr18_35249532_+	0.0346787517771166	0.21472567144948
KIRC	pathologic_stage	CAediting_1260812	chr18_35247800_+	0.0017652080923623	0.194527312117586
KIRC	pathologic_stage	CAediting_1260821	chr18_35247859_+	0.0179017976220683	0.174868692294689
KIRC	pathologic_stage	CAediting_1260841	chr18_35248579_+	0.000118097173824464	0.180106511311406
KIRC	pathologic_stage	CAediting_1260862	chr18_35248721_+	0.0152189585900542	0.195922655419378
KIRC	pathologic_stage	CAediting_1260869	chr18_35248771_+	0.00335843448626937	0.202467738181828
KIRP	pathologic_stage	CAediting_1260841	chr18_35248579_+	0.00812828301383096	0.188556813012838
KIRP	pathologic_stage	CAediting_1260911	chr18_35249532_+	0.0433013870413692	0.247678869876558
LUAD	pathologic_stage	CAediting_1260821	chr18_35247859_+	0.0314110506128787	0.196570707846565
LUAD	pathologic_stage	CAediting_1260862	chr18_35248721_+	0.0154634960626626	0.290486076718862
LUSC	pathologic_stage	CAediting_1260841	chr18_35248579_+	0.018651705063032	0.119383807341838
LUSC	pathologic_stage	CAediting_1260921	chr18_35249594_+	0.0250499426438338	0.139490298301785
PAAD	pathologic_stage	CAediting_1260869	chr18_35248771_+	0.0486778736658508	0.277483257963391
SKCM	pathologic_stage	CAediting_1260911	chr18_35249532_+	0.0347640438563048	0.216879896718027
STAD	pathologic_stage	CAediting_1260869	chr18_35248771_+	0.0471197995735592	-0.185539100588142
TGCT	clinical_stage	CAediting_1260911	chr18_35249532_+	0.0320878249855509	0.392149592505408
TGCT	pathologic_stage	CAediting_1260830	chr18_35247932_+	0.0145800754099969	-0.388285800946225
THCA	pathologic_stage	CAediting_1260826	chr18_35247904_+	0.0219460111131749	0.179942991349715
THCA	pathologic_stage	CAediting_1260841	chr18_35248579_+	0.00345542727025993	0.135775051170778
THCA	pathologic_stage	CAediting_1260869	chr18_35248771_+	0.0254828341701513	0.180601766965349
THCA	pathologic_stage	CAediting_1260873	chr18_35248792_+	0.0218002594466679	0.286339941135913
THCA	pathologic_stage	CAediting_1260913	chr18_35249542_+	0.016855139588958	0.211748196133207

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Relation with survival for ZNF397

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_1260891	chr18_35249442_+	0.034047821631582	0.0233482	0.0337087
LUSC	CAediting_1260862	chr18_35248721_+	0.026243454723886	0.0304253	12526.7
LUSC	CAediting_1260891	chr18_35249442_+	0.0207645277619893	0.00642235	2.03535e-05
PRAD	CAediting_1260921	chr18_35249594_+	0.00265606167130272	0.037789	778135
SKCM	CAediting_1260808	chr18_35247770_+	0.0338486202536338	0.0243732	1.04553e-05
SARC	CAediting_1260821	chr18_35247859_+	0.000862842813868281	0.00853123	79.8186

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RelatedDrugs for ZNF397

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZNF397

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene